BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007239
(611 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 178/313 (56%), Gaps = 19/313 (6%)
Query: 274 VSSEELPFVHLAVIK--------AATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLS 325
V +EE P VHL +K A+D FS+ N LG+GGFG VYKG L +G VAVKRL
Sbjct: 12 VPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLK 71
Query: 326 RKSWQGLE-EFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSL-DCFIFDSE 383
+ QG E +F+ E+ +I+ HRNL+RL G + E+LL+Y M N S+ C E
Sbjct: 72 EERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 131
Query: 384 RRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARI 443
+ L+W I G ++GL YLH+ KIIHRD+K +N+LLD++ A + DFG+A++
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Query: 444 FCENQKTANTRRVV-GTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG 502
+ K + V GT G++APEY G S K+DVF +GV++LE+I+G+R F L
Sbjct: 192 M--DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR--AFDLAR 247
Query: 503 HAQT----LLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTM 558
A LL +V L KE K VD L + +V + I + LLC Q P RP M
Sbjct: 248 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 307
Query: 559 SNVVALLGSESIA 571
S VV +L + +A
Sbjct: 308 SEVVRMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 19/313 (6%)
Query: 274 VSSEELPFVHLAVIK--------AATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLS 325
V +EE P VHL +K A+D F + N LG+GGFG VYKG L +G VAVKRL
Sbjct: 4 VPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK 63
Query: 326 RKSWQGLE-EFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSL-DCFIFDSE 383
+ QG E +F+ E+ +I+ HRNL+RL G + E+LL+Y M N S+ C E
Sbjct: 64 EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 123
Query: 384 RRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARI 443
+ L+W I G ++GL YLH+ KIIHRD+K +N+LLD++ A + DFG+A++
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 444 FCENQKTANTRRVV-GTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG 502
+ K + V G G++APEY G S K+DVF +GV++LE+I+G+R F L
Sbjct: 184 M--DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR--AFDLAR 239
Query: 503 HAQ----TLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTM 558
A LL +V L KE K VD L + +V + I + LLC Q P RP M
Sbjct: 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
Query: 559 SNVVALLGSESIA 571
S VV +L + +A
Sbjct: 300 SEVVRMLEGDGLA 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 132/216 (61%), Gaps = 15/216 (6%)
Query: 287 IKAATDGFSD------SNKLGQGGFGTVYKGVLPNGKEVAVKRLSR----KSWQGLEEFK 336
+K T+ F + NK+G+GGFG VYKG + N VAVK+L+ + + ++F
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 337 NEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
EI ++AK QH NLV L+G +G++ L+Y MPN SL + + L+W+ I
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
G + G+ +LHE+ IHRD+K +N+LLD+ AKISDFG+AR + +T R+
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
VGT YMAPE A+ G + KSD++SFGV++LEII+G
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 132/216 (61%), Gaps = 15/216 (6%)
Query: 287 IKAATDGFSD------SNKLGQGGFGTVYKGVLPNGKEVAVKRLSR----KSWQGLEEFK 336
+K T+ F + NK+G+GGFG VYKG + N VAVK+L+ + + ++F
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 337 NEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
EI ++AK QH NLV L+G +G++ L+Y MPN SL + + L+W+ I
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
G + G+ +LHE+ IHRD+K +N+LLD+ AKISDFG+AR + +T R+
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
VGT YMAPE A+ G + KSD++SFGV++LEII+G
Sbjct: 196 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 131/216 (60%), Gaps = 15/216 (6%)
Query: 287 IKAATDGFSD------SNKLGQGGFGTVYKGVLPNGKEVAVKRLSR----KSWQGLEEFK 336
+K T+ F + NK+G+GGFG VYKG + N VAVK+L+ + + ++F
Sbjct: 14 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 72
Query: 337 NEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
EI ++AK QH NLV L+G +G++ L+Y MPN SL + + L+W+ I
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 132
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
G + G+ +LHE+ IHRD+K +N+LLD+ AKISDFG+AR + + R+
Sbjct: 133 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
VGT YMAPE A+ G + KSD++SFGV++LEII+G
Sbjct: 190 VGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 273 LVSSEELPF----VHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKS 328
L SS +PF V L ++ AT+ F +G G FG VYKGVL +G +VA+KR + +S
Sbjct: 16 LSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75
Query: 329 WQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSE-RRLQ 387
QG+EEF+ EI ++ +H +LV L+G E E +LIY+ M N +L ++ S+ +
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS 135
Query: 388 LNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN 447
++W I G ++GL YLH + IIHRD+K N+LLD++ V KI+DFG+++ E
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 448 QKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTL 507
+T V GT GY+ PEY ++G + KSDV+SFGV++ E++ + L L
Sbjct: 193 DQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 508 LAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
+ + G+ + VDP L + + + C+ RP+M +V+
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 162/295 (54%), Gaps = 8/295 (2%)
Query: 273 LVSSEELPF----VHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKS 328
L SS +PF V L ++ AT+ F +G G FG VYKGVL +G +VA+KR + +S
Sbjct: 16 LSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75
Query: 329 WQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSE-RRLQ 387
QG+EEF+ EI ++ +H +LV L+G E E +LIY+ M N +L ++ S+ +
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS 135
Query: 388 LNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN 447
++W I G ++GL YLH + IIHRD+K N+LLD++ V KI+DFG+++ E
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192
Query: 448 QKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTL 507
+T V GT GY+ PEY ++G + KSDV+SFGV++ E++ + L L
Sbjct: 193 GQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 508 LAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
+ + G+ + VDP L + + + C+ RP+M +V+
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 127/216 (58%), Gaps = 15/216 (6%)
Query: 287 IKAATDGFSD------SNKLGQGGFGTVYKGVLPNGKEVAVKRLSR----KSWQGLEEFK 336
+K T+ F + NK G+GGFG VYKG + N VAVK+L+ + + ++F
Sbjct: 11 LKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFD 69
Query: 337 NEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
EI + AK QH NLV L+G +G++ L+Y PN SL + + L+W+ I
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKI 129
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
G + G+ +LHE+ IHRD+K +N+LLD+ AKISDFG+AR + + R+
Sbjct: 130 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
VGT Y APE A+ G + KSD++SFGV++LEII+G
Sbjct: 187 VGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 115/217 (52%), Gaps = 17/217 (7%)
Query: 278 ELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKN 337
E+P L +IK +LG G FG V+ G +VA+K L + E F
Sbjct: 5 EIPRESLQLIK----------RLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLE 53
Query: 338 EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
E ++ KL+H LV+L + E ++ E M SL F+ D E R L ++
Sbjct: 54 EAQIMKKLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMA 111
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVV 457
++ G+ Y+ R+ IHRDL+ +N+L+ ++ KI+DFG+AR+ +N+ TA +
Sbjct: 112 AQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTAR-QGAK 167
Query: 458 GTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKR 494
+ APE A+ G F++KSDV+SFG+++ E+++ R
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 274 VSSEELPFVHLAVIKAATDG------FSDSN---KLGQGGFGTVYKGVLPNGKEVAVKRL 324
+S ++P + A DG + D N K+G G FGTV++ +G +VAVK L
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKIL 68
Query: 325 SRKSWQG--LEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDS 382
+ + + EF E+ ++ +L+H N+V +G + ++ E + SL + S
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 383 ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR 442
R QL+ ++ ++KG+ YLH + I+HRDLK N+L+DK K+ DFG++R
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 443 IFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG 502
+ + ++ GT +MAPE + + KSDV+SFGVI+ E+ + ++ G
Sbjct: 188 L--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--N 243
Query: 503 HAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
AQ + A ++ K +E + + PQV I C +P RP+ + ++
Sbjct: 244 PAQVVAAVGFKC----KRLE------IPRNLNPQVAAIIEG---CWTNEPWKRPSFATIM 290
Query: 563 ALL 565
LL
Sbjct: 291 DLL 293
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 84 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 198
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 199 VWSFGILLTEIVTHGR 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 86
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 87 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 142
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 201
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 202 VWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 85
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 86 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 141
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 200
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 201 VWSFGILLTEIVTHGR 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 192
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 79
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 80 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 135
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 194
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 195 VWSFGILLTEIVTHGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 192
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 78
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 79 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 134
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 193
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 194 VWSFGILLTEIVTHGR 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 87
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 88 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 143
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSD 202
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 203 VWSFGILLTEIVTHGR 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 83 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 198 VWSFGILLTEIVTHGR 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 84 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSD 198
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 199 VWSFGILLTEIVTHGR 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSD 192
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 72
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 73 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 128
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSD 187
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 188 VWSFGILLTEIVTHGR 203
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 150/303 (49%), Gaps = 30/303 (9%)
Query: 274 VSSEELPFVHLAVIKAATDG------FSDSN---KLGQGGFGTVYKGVLPNGKEVAVKRL 324
+S ++P + A DG + D N K+G G FGTV++ +G +VAVK L
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKIL 68
Query: 325 SRKSWQG--LEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDS 382
+ + + EF E+ ++ +L+H N+V +G + ++ E + SL + S
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 383 ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR 442
R QL+ ++ ++KG+ YLH + I+HR+LK N+L+DK K+ DFG++R
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 443 IFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG 502
+ + +++ GT +MAPE + + KSDV+SFGVI+ E+ + ++ G
Sbjct: 188 L--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--N 243
Query: 503 HAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
AQ + A ++ K +E + + PQV I C +P RP+ + ++
Sbjct: 244 PAQVVAAVGFKC----KRLE------IPRNLNPQVAAIIEG---CWTNEPWKRPSFATIM 290
Query: 563 ALL 565
LL
Sbjct: 291 DLL 293
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 331
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 447 VWSFGILLTELTTKGR 462
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 72
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 128
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 188 VWSFGILLTELTTKGR 203
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 227
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + + +C Q +P +RP+ +++ + E
Sbjct: 228 GLSNEQVLRFVMEGGLLDKPDNCPDML--LELMRMCWQYNPKMRPSFLEIISSIKEE 282
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 71
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 187 VWSFGILLTELTTKGR 202
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 75
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 191 VWSFGILLTELTTKGR 206
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G FG V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 73
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 74 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 129
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
+L+ +N+L+ + KI+DFG+AR+ +N+ TA + APE G F++KSD
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIKSD 188
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 189 VWSFGILLTEIVTHGR 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 73
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 189 VWSFGILLTELTTKGR 204
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 191
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 236
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 237 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 291
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V+ G N +VAVK L + ++ F E L+ LQH LVRL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
E +I E M SL F+ S+ ++ + I++G+ Y+ R IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKS 477
RDL+ +NVL+ + ++ KI+DFG+AR+ +N+ TA + APE G F++KS
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKS 192
Query: 478 DVFSFGVIVLEIIS 491
DV+SFG+++ EI++
Sbjct: 193 DVWSFGILLYEIVT 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
KLG G FG V+ G N +VAVK L + ++ F E L+ LQH LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ E +I E M SL F+ S+ ++ + I++G+ Y+ R IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKS 477
RDL+ +NVL+ + ++ KI+DFG+AR+ +N+ TA + APE G F++KS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKS 191
Query: 478 DVFSFGVIVLEIIS 491
+V+SFG+++ EI++
Sbjct: 192 NVWSFGILLYEIVT 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTAR-QGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ K++H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 25/282 (8%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 249
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+ R+ +N+ TA + + APE A+ G F++KSD
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 479 VFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVV 538
V+SFG+++ E+ + R Y + +L V + G M P+
Sbjct: 365 VWSFGILLTELTTKGRVP--YPGMVNREVLDQV----ERGYRM----------PCPPECP 408
Query: 539 RCIH-IGLLCVQEDPAVRPTMSNVVALLGSESIALSEPRQPP 579
+H + C ++DP RPT + A L + +EP+ P
Sbjct: 409 ESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFTSTEPQXQP 449
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M SL F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 132 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 189 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 233
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 234 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 288
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA--V 81
Query: 359 EGEEKLLIYELMPNRSLDCFI--FDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EE IY +M S C + E L ++ I+ G+ Y+ R+ +
Sbjct: 82 VSEEP--IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++K
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIK 195
Query: 477 SDVFSFGVIVLEIISGKR 494
SDV+SFG+++ E+ + R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 235
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 236 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 163 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 219
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 220 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 264
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 265 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 319
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 191
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 236
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 237 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 291
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 235
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 236 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 32/295 (10%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI + Y + +L +V
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV-- 253
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
EG LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 254 --MEGG-------LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 229
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 230 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
KLGQG FG V+ G VA+K L + E F E ++ KL+H LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E ++ E M L F+ E L ++ I+ G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ +++V K++DFG+AR+ +N+ TA + + APE A+ G F++KSD
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ E+ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ ++ N +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N + +D KI DFGM R E
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 229
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + + +C Q +P +RP+ +++ + E
Sbjct: 230 GLSNEQVLRFVMEGGLLDKPDNCPDML--LELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 29/210 (13%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKS----WQGLEEFKNEIILIAKLQHRNLVRLVG 355
+G GGFG VY+ G EVAVK Q +E + E L A L+H N++ L G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ----LNWNTCYNIIGGISKGLLYLHEDS 411
++ L+ E L+ + S +R+ +NW I++G+ YLH+++
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAV------QIARGMNYLHDEA 125
Query: 412 RLKIIHRDLKPSNVLLDKDM--------VAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
+ IIHRDLK SN+L+ + + + KI+DFG+AR + K + G Y +M
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS----AAGAYAWM 181
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
APE +FS SDV+S+GV++ E+++G+
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+KL H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ + N +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 242
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 243 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+KL H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 36/297 (12%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY----KGVLPNGKE--VAVKRLSRK-SWQGLEEFKNEII 340
+ A + + S +LGQG FG VY KGV+ + E VA+K ++ S + EF NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLN-------WNTC 393
++ + ++VRL+G +G+ L+I ELM L ++ + N +
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
+ G I+ G+ YL+ + K +HRDL N ++ +D KI DFGM R E
Sbjct: 131 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 187
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+ + +M+PE +G+F+ SDV+SFGV++ EI TL +Q
Sbjct: 188 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQ 232
Query: 514 LWKEGKEMEFV--DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
+ + FV LL K + P ++ + +C Q +P +RP+ +++ + E
Sbjct: 233 GLSNEQVLRFVMEGGLLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEIISSIKEE 287
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
+LG G G V+ G +VAVK L + S + F E L+ +LQH+ LVRL +
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E +I E M N SL F+ + ++L N ++ I++G+ ++ E + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL+ +N+L+ + KI+DFG+AR+ + + TA + APE G F++KSD
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYGTFTIKSD 192
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 299 KLGQGGFGTVY----KGVLPNGKE--VAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
+LG+G FG V+ +LP + VAVK L S ++F+ E L+ LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFI--FDSERRL----------QLNWNTCYNIIGGI 400
G EG L+++E M + L+ F+ + +L L + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+ G++YL + L +HRDL N L+ + +V KI DFGM+R R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
+M PE + F+ +SDV+SFGV++ EI + + + L+ +G+E
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI------DCITQGRE 255
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEP 575
+E + + P V I G C Q +P R ++ +V A L +++A + P
Sbjct: 256 LE-------RPRACPPEVYAIMRG--CWQREPQQRHSIKDVHARL--QALAQAPP 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 299 KLGQGGFGTVY----KGVLPNGKE--VAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
+LG+G FG V+ +LP + VAVK L S ++F+ E L+ LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFI--FDSERRL----------QLNWNTCYNIIGGI 400
G EG L+++E M + L+ F+ + +L L + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+ G++YL + L +HRDL N L+ + +V KI DFGM+R R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
+M PE + F+ +SDV+SFGV++ EI + + + L+ +G+E
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI------DCITQGRE 249
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEP 575
+E + + P V I G C Q +P R ++ +V A L +++A + P
Sbjct: 250 LE-------RPRACPPEVYAIMRG--CWQREPQQRHSIKDVHARL--QALAQAPP 293
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 38/295 (12%)
Query: 299 KLGQGGFGTVY----KGVLPNGKE--VAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
+LG+G FG V+ +LP + VAVK L S ++F+ E L+ LQH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFI--FDSERRL----------QLNWNTCYNIIGGI 400
G EG L+++E M + L+ F+ + +L L + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+ G++YL + L +HRDL N L+ + +V KI DFGM+R R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
+M PE + F+ +SDV+SFGV++ EI + + + L+ +G+E
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI------DCITQGRE 278
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEP 575
+E + + P V I G C Q +P R ++ +V A L +++A + P
Sbjct: 279 LE-------RPRACPPEVYAIMRG--CWQREPQQRHSIKDVHARL--QALAQAPP 322
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 298 NKLGQGGFGTVY--KGVLPNGKEVAVKRL---SRKSWQGLEEFKNEIILIAKLQHRNLVR 352
+KLG GG TVY + + N K VA+K + R+ + L+ F+ E+ ++L H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSR 412
++ E + L+ E + +L +I E L+ +T N I G+ + H+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD--- 129
Query: 413 LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
++I+HRD+KP N+L+D + KI DFG+A+ E T T V+GT Y +PE A
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEA 188
Query: 473 FSVKSDVFSFGVIVLEIISGK 493
+D++S G+++ E++ G+
Sbjct: 189 TDECTDIYSIGIVLYEMLVGE 209
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSR-KSWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 409 EDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 409 EDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + SE + ++ +I ++G+ YLH S IIH
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLHAKS---IIH 131
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D KI DFG+A + + ++ G+ +MAPE +S
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 192 FQSDVYAFGIVLYELMTGQ 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 116/211 (54%), Gaps = 22/211 (10%)
Query: 300 LGQGGFGTVYKGV-LPNGK----EVAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRL 353
LG G FGTVYKG+ +P G+ VA+K L+ + EF +E +++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSE----RRLQLNWNTCYNIIGGISKGLLYLHE 409
+G + +L + +LMP+ L ++ + + +L LNW C I +KG++YL E
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW--CVQI----AKGMMYLEE 158
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
+++HRDL NVL+ KI+DFG+AR+ ++K N +MA E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 470 EGLFSVKSDVFSFGVIVLEIIS--GKRNSGF 498
F+ +SDV+S+GV + E+++ GK G
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 246
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMAR + +M P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 116/211 (54%), Gaps = 22/211 (10%)
Query: 300 LGQGGFGTVYKGV-LPNGK----EVAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRL 353
LG G FGTVYKG+ +P G+ VA+K L+ + EF +E +++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSE----RRLQLNWNTCYNIIGGISKGLLYLHE 409
+G + +L + +LMP+ L ++ + + +L LNW C I +KG++YL E
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW--CVQI----AKGMMYLEE 135
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
+++HRDL NVL+ KI+DFG+AR+ ++K N +MA E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 470 EGLFSVKSDVFSFGVIVLEIIS--GKRNSGF 498
F+ +SDV+S+GV + E+++ GK G
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 142/274 (51%), Gaps = 29/274 (10%)
Query: 300 LGQGGFGTVYKGVLP--NGKE---VAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRL 353
+G G FG VYKG+L +GK+ VA+K L + +F E ++ + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
G + + ++I E M N +LD F+ E+ + + ++ GI+ G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN-QKTANTRRVVGTYGYMAPEYAMEGL 472
+HRDL N+L++ ++V K+SDFG++R+ ++ + T T + APE
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 473 FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMK-S 531
F+ SDV+SFG+++ E+++ + L+ H V + +G F P M
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHE------VMKAINDG----FRLPTPMDCP 276
Query: 532 SSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
S+I Q++ + C Q++ A RP +++V++L
Sbjct: 277 SAIYQLM------MQCWQQERARRPKFADIVSIL 304
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 25/203 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FG V+ G N +VA+K + R+ E+F E ++ KL H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 358 IEGEEKLLIYELMPNRSLDCFI------FDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+E L++E M + L ++ F +E L + + C +G+ YL E S
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--------EGMAYLEEAS 123
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYA 468
+IHRDL N L+ ++ V K+SDFGM R ++Q T++T GT + +PE
Sbjct: 124 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVF 176
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
+S KSDV+SFGV++ E+ S
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 300 LGQGGFGTVYKGVL------PNGKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG G FG VY+G + P+ +VAVK L S Q +F E ++I+K H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL----QLNWNTCYNIIGGISKGLLYLH 408
+G ++ + ++ ELM L F+ ++ R L ++ I+ G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 409 EDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
E+ IHRD+ N LL VAKI DFGMA+ + +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E MEG+F+ K+D +SFGV++ EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 17/246 (6%)
Query: 249 KRSQRGLLHELAGPISVSLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTV 308
K+ GL +L+ P S Q+ + E+P L + K KLG G FG V
Sbjct: 155 KKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEK----------KLGAGQFGEV 204
Query: 309 YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYE 368
+ +VAVK + S +E F E ++ LQH LV+L + E +I E
Sbjct: 205 WMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITE 262
Query: 369 LMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD 428
M SL F+ E Q + I++G+ ++ + + IHRDL+ +N+L+
Sbjct: 263 FMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVS 318
Query: 429 KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLE 488
+V KI+DFG+AR+ +N+ TA + APE G F++KSDV+SFG++++E
Sbjct: 319 ASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLME 377
Query: 489 IISGKR 494
I++ R
Sbjct: 378 IVTYGR 383
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 36/278 (12%)
Query: 300 LGQGGFGTVYKGVL--PNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V +G L P KE VA+K L + + EF +E ++ + +H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G +++ E M N +LD F+ RL T ++G GI+ G+ YL E
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL-----RLNDGQFTVIQLVGMLRGIASGMRYLAE-- 136
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG---TYGYMAPEYA 468
+ +HRDL N+L++ ++V K+SDFG++R EN +G + APE
Sbjct: 137 -MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPL 527
F+ SD +S+G+++ E++S G+R Y Q ++ + Q ++ + P
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQDVINAIEQDYR-------LPPP 245
Query: 528 LMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+S+ Q++ L C Q+D RP VV+ L
Sbjct: 246 PDCPTSLHQLM------LDCWQKDRNARPRFPQVVSAL 277
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIH 129
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + + ++ G+ +MAPE + +S
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 190 FQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIH 127
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + + ++ G+ +MAPE + +S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIH 132
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + + ++ G+ +MAPE + +S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIH 132
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + + ++ G+ +MAPE + +S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 52/285 (18%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSW---QGLEEFKNEIILIAKLQHRNLVRLV 354
+G G G V G L P ++V V + K+ + +F +E ++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G G +++ E M N SLD F+ R T ++G G+ G+ YL S
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYG------YMAP 465
L +HRDL NVL+D ++V K+SDFG++R+ ++ A T T G + AP
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT-----TTGGKIPIRWTAP 223
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
E FS SDV+SFGV++ E+++ G+R Y + +++ V + ++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERP---YWNMTNRDVISSVEEGYR-------- 272
Query: 525 DPLLMKSSSIPQVVRCIH----IGLLCVQEDPAVRPTMSNVVALL 565
+P + C H + L C +D A RP S +V++L
Sbjct: 273 ---------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 74 T-APQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIH 127
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + + ++ G+ +MAPE + +S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ ++ + SL + SE + ++ +I ++G+ YLH S IIH
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIH 143
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D KI DFG+A + ++ G+ +MAPE +S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 204 FQSDVYAFGIVLYELMTGQ 222
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 16/213 (7%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQ 346
+++ F KLG G + TVYKG+ G VA+K + S +G EI L+ +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 347 HRNLVRLVGCGIEGEEKL-LIYELMPN---RSLDC-FIFDSERRLQLNWNTCYNIIGGIS 401
H N+VRL I E KL L++E M N + +D + ++ R L+LN + +
Sbjct: 62 HENIVRLYDV-IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--QLL 118
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
+GL + HE+ KI+HRDLKP N+L++K K+ DFG+AR F T ++ V T
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLW 173
Query: 462 YMAPEYAMEG-LFSVKSDVFSFGVIVLEIISGK 493
Y AP+ M +S D++S G I+ E+I+GK
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG+AR+ ++ + A T R + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + SE + ++ +I ++G+ YLH S IIH
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIH 143
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D KI DFG+A + ++ G+ +MAPE +S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 204 FQSDVYAFGIVLYELMTGQ 222
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIH 154
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + + ++ G+ +MAPE + +S
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 215 FQSDVYAFGIVLYELMTGQ 233
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 52/285 (18%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSW---QGLEEFKNEIILIAKLQHRNLVRLV 354
+G G G V G L P ++V V + K+ + +F +E ++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G G +++ E M N SLD F+ R T ++G G+ G+ YL S
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYG------YMAP 465
L +HRDL NVL+D ++V K+SDFG++R+ ++ A T T G + AP
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT-----TTGGKIPIRWTAP 223
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
E FS SDV+SFGV++ E+++ G+R Y + +++ V + ++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERP---YWNMTNRDVISSVEEGYR-------- 272
Query: 525 DPLLMKSSSIPQVVRCIH----IGLLCVQEDPAVRPTMSNVVALL 565
+P + C H + L C +D A RP S +V++L
Sbjct: 273 ---------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 25/203 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FG V+ G N +VA+K + R+ E+F E ++ KL H LV+L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 358 IEGEEKLLIYELMPNRSLDCFI------FDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+E L++E M + L ++ F +E L + + C +G+ YL E
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--------EGMAYLEEAC 121
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYA 468
+IHRDL N L+ ++ V K+SDFGM R ++Q T++T GT + +PE
Sbjct: 122 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVF 174
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
+S KSDV+SFGV++ E+ S
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 36/278 (12%)
Query: 300 LGQGGFGTVYKGVL--PNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V +G L P KE VA+K L + + EF +E ++ + +H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G +++ E M N +LD F+ RL T ++G GI+ G+ YL E
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL-----RLNDGQFTVIQLVGMLRGIASGMRYLAE-- 134
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG---TYGYMAPEYA 468
+ +HRDL N+L++ ++V K+SDFG++R EN +G + APE
Sbjct: 135 -MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPL 527
F+ SD +S+G+++ E++S G+R Y Q ++ + Q ++ + P
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQDVINAIEQDYR-------LPPP 243
Query: 528 LMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+S+ Q++ L C Q+D RP VV+ L
Sbjct: 244 PDCPTSLHQLM------LDCWQKDRNARPRFPQVVSAL 275
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 25/203 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FG V+ G N +VA+K + R+ E+F E ++ KL H LV+L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 358 IEGEEKLLIYELMPNRSLDCFI------FDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+E L++E M + L ++ F +E L + + C +G+ YL E
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--------EGMAYLEEAC 126
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYA 468
+IHRDL N L+ ++ V K+SDFGM R ++Q T++T GT + +PE
Sbjct: 127 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVF 179
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
+S KSDV+SFGV++ E+ S
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 25/203 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FG V+ G N +VA+K + R+ E+F E ++ KL H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 358 IEGEEKLLIYELMPNRSLDCFI------FDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+E L++E M + L ++ F +E L + + C +G+ YL E
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--------EGMAYLEEAC 123
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYA 468
+IHRDL N L+ ++ V K+SDFGM R ++Q T++T GT + +PE
Sbjct: 124 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVF 176
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
+S KSDV+SFGV++ E+ S
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHAKS---IIH 155
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + + ++ G+ +MAPE + +S
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 165 DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 44/297 (14%)
Query: 299 KLGQGGFGTVY----KGVLPNGKE--VAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
+LG+G FG V+ + P + VAVK L S ++F E L+ LQH ++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFI----------FDSERRLQLNWNTCYNIIGGISK 402
G +EG+ ++++E M + L+ F+ + +L + +I I+
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG---- 458
G++YL + +HRDL N L+ ++++ KI DFGM+R + + + RV G
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRVGGHTML 192
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEG 518
+M PE M F+ +SDV+S GV++ EI + + + L+ + V + +G
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------VIECITQG 246
Query: 519 KEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEP 575
+ +L + + PQ V + +G C Q +P +R + + LL +++A + P
Sbjct: 247 R-------VLQRPRTCPQEVYELMLG--CWQREPHMRKNIKGIHTLL--QNLAKASP 292
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 7/197 (3%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
KLG G FG V+ +VAVK + S +E F E ++ LQH LV+L
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV- 78
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ E +I E M SL F+ E Q + I++G+ ++ + + IH
Sbjct: 79 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRN---YIH 134
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKS 477
RDL+ +N+L+ +V KI+DFG+AR+ +N+ TA + APE G F++KS
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGSFTIKS 193
Query: 478 DVFSFGVIVLEIISGKR 494
DV+SFG++++EI++ R
Sbjct: 194 DVWSFGILLMEIVTYGR 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 165 DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HRDL N ++ D KI DFGM R E + + +MA
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 242
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEPRQPPFP 581
L + + P+ R + +C Q +P +RPT +V LL + P FP
Sbjct: 243 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD-------LHPSFP 292
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 135
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 245
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 246 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 162
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 163 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 222
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 223 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 272
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 273 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 135
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 245
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 246 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HRDL N ++ D KI DFGM R E + + +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
L + + P+ R + +C Q +P +RPT +V LL
Sbjct: 246 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 152
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + +PE
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 262
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 263 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 292
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HRDL N ++ D KI DFGM R E + + +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
L + + P+ R + +C Q +P +RPT +V LL +
Sbjct: 246 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 139/276 (50%), Gaps = 34/276 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP+ KE++V + K + + +F E ++ + H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ + + T ++G GI+ G+ YL S
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-----TVIQLVGMLRGIASGMKYL---S 164
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG+ R+ ++ + A T R + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
F+ SDV+S+G+++ E++S G+R Y Q ++ V EG + P +
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVIKAV----DEGYRLP---PPMD 274
Query: 530 KSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+++ Q++ L C Q+D RP +V++L
Sbjct: 275 CPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 14/198 (7%)
Query: 299 KLGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
K+G+G G V +G++VAVK + + Q E NE++++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ GEE ++ E + +L D +++LN + + + L YLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCE--NQKTANTRRVVGTYGYMAPEYAMEGLFSV 475
RD+K ++LL D K+SDFG FC ++ + +VGT +MAPE L++
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFG----FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 476 KSDVFSFGVIVLEIISGK 493
+ D++S G++V+E++ G+
Sbjct: 221 EVDIWSLGIMVIEMVDGE 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 134
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 135
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 162
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 130
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 129
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + ++ G+ +MAPE + +S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HRDL N ++ D KI DFGM R E + + +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
L + + P+ R + +C Q +P +RPT +V LL +
Sbjct: 246 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 136
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 131
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 138
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + + APE E
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 25/203 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FG V+ G N +VA+K + R+ E+F E ++ KL H LV+L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 358 IEGEEKLLIYELMPNRSLDCFI------FDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+E L+ E M + L ++ F +E L + + C +G+ YL E
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--------EGMAYLEEAC 124
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYA 468
+IHRDL N L+ ++ V K+SDFGM R ++Q T++T GT + +PE
Sbjct: 125 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVF 177
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
+S KSDV+SFGV++ E+ S
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 244
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 245 --KVYELMRACWQWNPSDRPSFAEI 267
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 137
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HRDL N ++ D KI DFGM R E + + +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEPRQPPFP 581
L + + P+ R + +C Q +P +RPT +V LL + P FP
Sbjct: 246 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD-------LHPSFP 295
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 25/203 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FG V+ G N +VA+K + S ++F E ++ KL H LV+L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 358 IEGEEKLLIYELMPNRSLDCFI------FDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+E L++E M + L ++ F +E L + + C +G+ YL E
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--------EGMAYLEEAC 143
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYA 468
+IHRDL N L+ ++ V K+SDFGM R ++Q T++T GT + +PE
Sbjct: 144 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVF 196
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
+S KSDV+SFGV++ E+ S
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 244
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 245 --KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 131
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 134
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HRDL N ++ D KI DFGM R E + + +MA
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 244
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEPRQPPFP 581
L + + P+ R + +C Q +P +RPT +V LL + P FP
Sbjct: 245 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD-------LHPSFP 294
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIH 147
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + ++ G+ +MAPE + +S
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 208 FQSDVYAFGIVLYELMTGQ 226
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 244
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 245 --KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 27/275 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRL---SRKSWQGLEEFKNEIILIAKLQHRN 349
F K+G+G F VY+ L +G VA+K++ + + EI L+ +L H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFI--FDSERRLQLNWNTCYNIIGGISKGLLYL 407
+++ IE E ++ EL L I F ++RL + T + + L ++
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPERTVWKYFVQLCSALEHM 152
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H SR +++HRD+KP+NV + V K+ D G+ R F + KT +VGT YM+PE
Sbjct: 153 H--SR-RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSPER 207
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD-P 526
E ++ KSD++S G ++ E+ + + S FY G L + L K+ ++ ++ P
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQ--SPFY--GDKMNL----YSLCKKIEQCDYPPLP 259
Query: 527 LLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNV 561
S + Q+V +C+ DP RP ++ V
Sbjct: 260 SDHYSEELRQLVN------MCINPDPEKRPDVTYV 288
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 137
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 196
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 197 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 243
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 244 --KVYELMRACWQWNPSDRPSFAEI 266
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 193
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 194 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 240
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 241 --KVYELMRACWQWNPSDRPSFAEI 263
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 149
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + + APE E
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 149
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + + APE E
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 239
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 240 --KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 9/200 (4%)
Query: 297 SNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
S ++G G FGTVYKG V + ++ + + + F+NE+ ++ K +H N++ +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+ + ++ + SL + E + Q+ +I ++G+ YLH + II
Sbjct: 101 -MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHAKN---II 154
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLF 473
HRD+K +N+ L + + KI DFG+A + + + G+ +MAPE F
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 474 SVKSDVFSFGVIVLEIISGK 493
S +SDV+S+G+++ E+++G+
Sbjct: 215 SFQSDVYSYGIVLYELMTGE 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
++G G FGTVYKG V + ++ + Q L+ FKNE+ ++ K +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ + ++ + SL + E + ++ +I ++G+ YLH S IIH
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM---EGLFS 474
RDLK +N+ L +D+ KI DFG+A + ++ G+ +MAPE + +S
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 475 VKSDVFSFGVIVLEIISGK 493
+SDV++FG+++ E+++G+
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 239
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 240 --KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 244
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 245 --KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 194
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 241
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 242 --KVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 146
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 205
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 206 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 252
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 253 --KVYELMRACWQWNPSDRPSFAEI 275
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ R ++ I KG+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL---G 134
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSW---QGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G L P +E+ V + K+ + +F +E ++ + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + ++I E M N SLD F+ ++ R T ++G GI G+ YL S
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLRGIGSGMKYL---S 148
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFGM+R+ ++ + A T R + APE
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKR 494
F+ SDV+S+G+++ E++S G+R
Sbjct: 209 RKFTSASDVWSYGIVMWEVMSYGER 233
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 131
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHRDL N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 194
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 241
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 242 --KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSW---QGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G L P +E+ V + K+ + +F +E ++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + ++I E M N SLD F+ ++ R T ++G GI G+ YL S
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLRGIGSGMKYL---S 127
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFGM+R+ ++ + A T R + APE
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKR 494
F+ SDV+S+G+++ E++S G+R
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGER 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 22/289 (7%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGL 332
+ +E L F + + + +KLG G +G VY GV VAVK L + + +
Sbjct: 14 LGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-V 72
Query: 333 EEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNT 392
EEF E ++ +++H NLV+L+G ++ E MP +L ++ + R ++
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVV 131
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
+ IS + YL + + IHRDL N L+ ++ V K++DFG++R+ + TA+
Sbjct: 132 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+ APE FS+KSDV++FGV++ EI + + ++ + L+ V+
Sbjct: 189 AGAKFPI-KWTAPESLAYNTFSIKSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVY 241
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNV 561
L ++G ME P+V + C + PA RP+ +
Sbjct: 242 DLLEKGYRME------QPEGCPPKVYELMRA---CWKWSPADRPSFAET 281
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSW---QGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G L P +E+ V + K+ + +F +E ++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + ++I E M N SLD F+ ++ R T ++G GI G+ YL S
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLRGIGSGMKYL---S 133
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFGM+R+ ++ + A T R + APE
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKR 494
F+ SDV+S+G+++ E++S G+R
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGER 218
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA + APE FS+K
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIK 193
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 194 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 240
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 241 --KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA + APE FS+K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIK 194
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 195 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 241
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 242 --KVYELMRACWQWNPSDRPSFAEI 264
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HR+L N ++ D KI DFGM R E + + +MA
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 246
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEPRQPPFP 581
L + + P+ R + +C Q +P +RPT +V LL + P FP
Sbjct: 247 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD-------LHPSFP 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 299 KLGQGGFGTVYKG----VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV 351
+LGQG FG VY+G ++ E VAVK ++ S + EF NE ++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-------DSERRLQLNWNTCYNIIGGISKGL 404
RL+G +G+ L++ ELM + L ++ ++ R + I+ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YL+ K +HR+L N ++ D KI DFGM R E + + +MA
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE +G+F+ SD++SFGV++ EI S L +Q + ++FV
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 525 --DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSESIALSEPRQPPFP 581
L + + P+ R + +C Q +P +RPT +V LL + P FP
Sbjct: 246 MDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD-------LHPSFP 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 18/205 (8%)
Query: 300 LGQGGFGTVYKG--VLPNGKE--VAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP +E VA+K L + + +F E ++ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + + +++ E M N SLD F+ ++ + T ++G GIS G+ YL S
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF-----TVIQLVGMLRGISAGMKYL---S 141
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + A T R + APE
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 471 GLFSVKSDVFSFGVIVLEIIS-GKR 494
F+ SDV+S+G+++ E++S G+R
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGER 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 18/256 (7%)
Query: 243 PTSTDEKRSQRGLLHELAGPISVSLTQEGDLVSSEEL-PFVHLAVIKAATDGFSDSN-KL 300
P R + G+ + GP S +E VS E+ + L V + D+ K+
Sbjct: 102 PPPPARARQENGMPEKPPGPRSPQ--REPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKI 159
Query: 301 GQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
G+G G V V +GK VAVK++ + Q E NE++++ QH N+V + +
Sbjct: 160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 219
Query: 360 GEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRD 419
G+E ++ E + +L + + ++N + + + L LH +IHRD
Sbjct: 220 GDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 272
Query: 420 LKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEYAMEGLFSVKS 477
+K ++LL D K+SDFG FC RR +VGT +MAPE + +
Sbjct: 273 IKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 478 DVFSFGVIVLEIISGK 493
D++S G++V+E++ G+
Sbjct: 329 DIWSLGIMVIEMVDGE 344
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPNGK-EVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 379
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HR+L N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIK 438
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 439 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 485
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 486 --KVYELMRACWQWNPSDRPSFAEI 508
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 198 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 244
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 245 --KVYELMRACWQWNPSDRPSFAEI 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 299 KLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+LG+G FG+V Y + N G+ VAVK+L + + L +F+ EI ++ LQH N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 354 VG-CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G C G L LI E +P SL ++ + R ++ I KG+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 132
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAME 470
+ IHR+L N+L++ + KI DFG+ ++ ++++ + + APE E
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 471 GLFSVKSDVFSFGVIVLEIIS 491
FSV SDV+SFGV++ E+ +
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 239
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 240 --KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 239
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 240 --KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 239
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 240 --KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 193 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 239
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 240 --KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPNGK-EVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ ++N + IS + YL + + I
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---FI 337
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HR+L N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 396
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 397 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 443
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 444 --KVYELMRACWQWNPSDRPSFAEI 466
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 36/278 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKE--VAVKRL-SRKSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP +E VA+K L S + + +F +E ++ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + ++I E M N SLD F+ ++ + T ++G GI+ G+ YL +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-----TVIQLVGMLRGIAAGMKYLAD-- 153
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG---TYGYMAPEYA 468
+ +HRDL N+L++ ++V K+SDFG++R ++ +G + APE
Sbjct: 154 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPL 527
F+ SDV+S+G+++ E++S G+R Y Q ++ + Q ++ + P
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIEQDYR-------LPPP 262
Query: 528 LMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ S++ Q++ L C Q+D RP +V L
Sbjct: 263 MDCPSALHQLM------LDCWQKDRNHRPKFGQIVNTL 294
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 121/229 (52%), Gaps = 17/229 (7%)
Query: 271 GDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLS 325
G ++S E P L I T+ F LG G FGTVYKG+ +P G++V A+K L
Sbjct: 1 GSHMASGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 59
Query: 326 RK-SWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSER 384
S + +E +E ++A + + ++ RL+G + +L I +LMP C + D R
Sbjct: 60 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVR 114
Query: 385 RLQLNWNTCY--NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR 442
+ N + Y N I+KG+ YL ED RL +HRDL NVL+ KI+DFG+A+
Sbjct: 115 EHKDNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAK 171
Query: 443 IFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+ +K + +MA E + +++ +SDV+S+GV V E+++
Sbjct: 172 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 30/228 (13%)
Query: 297 SNKLGQGGFGTVYKG----VLPNGKE--VAVKRLSRKSWQGLEEFKNEIILIAKLQHRNL 350
+LG+G FG V+ + P + VAVK L + ++F+ E L+ LQH ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCF----------IFDSERRL---QLNWNTCYNII 397
V+ G +G+ ++++E M + L+ F + D + R +L + +I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVV 457
I+ G++YL + +HRDL N L+ +++ KI DFGM+R + + + RV
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVG 192
Query: 458 G----TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLT 501
G +M PE M F+ +SDV+SFGVI+ EI + + F L+
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++ K+GQG GTVY + + G+EVA+++++ + E NEI+++ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDS---ERRLQLNWNTCYNIIGGISKGLLYLHE 409
+ + G+E ++ E + SL + ++ E ++ C + L +LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLHS 135
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEY 467
+ ++IHRD+K N+LL D K++DFG FC ++R +VGT +MAPE
Sbjct: 136 N---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSXMVGTPYWMAPEV 188
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGK 493
+ K D++S G++ +E+I G+
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 31/217 (14%)
Query: 299 KLGQGGFGTVYKGVL------PNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRNLV 351
+LG+ FG VYKG L + VA+K L K+ L EEF++E +L A+LQH N+V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-----------DSERRLQ--LNWNTCYNIIG 398
L+G + + +I+ + L F+ D +R ++ L +++
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
I+ G+ YL S ++H+DL NVL+ + KISD G+ R A+ +++G
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLLG 205
Query: 459 T----YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+MAPE M G FS+ SD++S+GV++ E+ S
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++ K+GQG GTVY + + G+EVA+++++ + E NEI+++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDS---ERRLQLNWNTCYNIIGGISKGLLYLHE 409
+ + G+E ++ E + SL + ++ E ++ C + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLHS 134
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEY 467
+ ++IHRD+K N+LL D K++DFG FC ++R +VGT +MAPE
Sbjct: 135 N---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSXMVGTPYWMAPEV 187
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGK 493
+ K D++S G++ +E+I G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++ K+GQG GTVY + + G+EVA+++++ + E NEI+++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDS---ERRLQLNWNTCYNIIGGISKGLLYLHE 409
+ + G+E ++ E + SL + ++ E ++ C + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLHS 134
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEY 467
+ ++IHRD+K N+LL D K++DFG FC ++R +VGT +MAPE
Sbjct: 135 N---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGK 493
+ K D++S G++ +E+I G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++ K+GQG GTVY + + G+EVA+++++ + E NEI+++ + ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDS---ERRLQLNWNTCYNIIGGISKGLLYLHE 409
+ + G+E ++ E + SL + ++ E ++ C + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLHS 134
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEY 467
+ ++IHRD+K N+LL D K++DFG FC ++R +VGT +MAPE
Sbjct: 135 N---QVIHRDIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSEMVGTPYWMAPEV 187
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGK 493
+ K D++S G++ +E+I G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 38/282 (13%)
Query: 299 KLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQG-------LEEFKNEIILIAKLQHRNL 350
++G+GGFG V+KG L K V A+K L +G +EF+ E+ +++ L H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
V+L G+ ++ E +P L + D ++ W+ ++ I+ G+ Y+ ++
Sbjct: 86 VKLY--GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIALGIEYM-QN 140
Query: 411 SRLKIIHRDLKPSNVLL-----DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
I+HRDL+ N+ L + + AK++DFG+++ Q + ++G + +MAP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 466 EY--AMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEF 523
E A E ++ K+D +SF +I+ I++G+ Y G + ++ + +EG
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEG----- 246
Query: 524 VDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ P + + P++ I LC DP RP S +V L
Sbjct: 247 LRPTIPEDCP-PRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G FG VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 190
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + + V++L ++ ME + P+
Sbjct: 191 SDVWAFGVLLWEIAT------YGMSPYPGIDPSQVYELLEKDYRME-------RPEGCPE 237
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 238 --KVYELMRACWQWNPSDRPSFAEI 260
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 264 SVSLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVK 322
S+ T+EGD S L D D LG+G +G VY G L N +A+K
Sbjct: 1 SMRSTEEGDCESD-------LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIK 53
Query: 323 RLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDS 382
+ + + + EI L L+H+N+V+ +G E + E +P SL +
Sbjct: 54 EIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK 113
Query: 383 ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDK-DMVAKISDFGMA 441
L+ N T I +GL YLH++ +I+HRD+K NVL++ V KISDFG +
Sbjct: 114 WGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTS 170
Query: 442 RIFCENQKTANTRRVVGTYGYMAPEYAMEGL--FSVKSDVFSFGVIVLEIISGKRNSGFY 499
+ T GT YMAPE +G + +D++S G ++E+ +GK FY
Sbjct: 171 KRLAGINPCTET--FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK--PPFY 226
Query: 500 LTGHAQTLLAYV 511
G Q + V
Sbjct: 227 ELGEPQAAMFKV 238
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPNGK-EVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 340
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HR+L N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 399
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + L+ V++L ++ ME + P+
Sbjct: 400 SDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME-------RPEGCPE 446
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 447 --KVYELMRACWQWNPSDRPSFAEI 469
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 250 RSQRGLLHELAGPISVSLTQEGDLVSSEEL-PFVHLAVIKAATDGFSDSN-KLGQGGFGT 307
R + G+ + GP S +E VS E+ + L V + D+ K+G+G G
Sbjct: 32 RQENGMPEKPPGPRSPQ--REPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGI 89
Query: 308 V-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLI 366
V V +GK VAVK++ + Q E NE++++ QH N+V + + G+E ++
Sbjct: 90 VCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149
Query: 367 YELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVL 426
E + +L + + ++N + + + L LH +IHRD+K ++L
Sbjct: 150 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSIL 202
Query: 427 LDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEYAMEGLFSVKSDVFSFGV 484
L D K+SDFG FC RR +VGT +MAPE + + D++S G+
Sbjct: 203 LTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 258
Query: 485 IVLEIISGK 493
+V+E++ G+
Sbjct: 259 MVIEMVDGE 267
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 27/246 (10%)
Query: 249 KRSQRGLLHELAGPISVSLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTV 308
K+ GL +L+ P S Q+ + E+P L + K KLG G FG V
Sbjct: 149 KKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEK----------KLGAGQFGEV 198
Query: 309 YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYE 368
+ +VAVK + S +E F E ++ LQH LV+L + E +I E
Sbjct: 199 WMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITE 256
Query: 369 LMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD 428
M SL F+ E Q + I++G+ ++ + + IHRDL+ +N+L+
Sbjct: 257 FMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVS 312
Query: 429 KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLE 488
+V KI+DFG+AR+ + + APE G F++KSDV+SFG++++E
Sbjct: 313 ASLVCKIADFGLARVGAKF-----------PIKWTAPEAINFGSFTIKSDVWSFGILLME 361
Query: 489 IISGKR 494
I++ R
Sbjct: 362 IVTYGR 367
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 31/217 (14%)
Query: 299 KLGQGGFGTVYKGVL------PNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRNLV 351
+LG+ FG VYKG L + VA+K L K+ L EEF++E +L A+LQH N+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIF-----------DSERRLQ--LNWNTCYNIIG 398
L+G + + +I+ + L F+ D +R ++ L +++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
I+ G+ YL S ++H+DL NVL+ + KISD G+ R A+ +++G
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLLG 188
Query: 459 T----YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+MAPE M G FS+ SD++S+GV++ E+ S
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 14/198 (7%)
Query: 299 KLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
K+G+G G V + GK+VAVK++ + Q E NE++++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ G+E ++ E + +L + + + C +++ +S YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALS----YLHNQG---VIH 164
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCE--NQKTANTRRVVGTYGYMAPEYAMEGLFSV 475
RD+K ++LL D K+SDFG FC +++ + +VGT +MAPE +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG----FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 476 KSDVFSFGVIVLEIISGK 493
+ D++S G++V+E+I G+
Sbjct: 221 EVDIWSLGIMVIEMIDGE 238
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 190
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + + V++L ++ ME + P+
Sbjct: 191 SDVWAFGVLLWEIAT------YGMSPYPGIDPSQVYELLEKDYRME-------RPEGCPE 237
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 238 --KVYELMRACWQWNPSDRPSFAEI 260
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 138/282 (48%), Gaps = 38/282 (13%)
Query: 299 KLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQG-------LEEFKNEIILIAKLQHRNL 350
++G+GGFG V+KG L K V A+K L +G +EF+ E+ +++ L H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
V+L G+ ++ E +P L + D ++ W+ ++ I+ G+ Y+ ++
Sbjct: 86 VKLY--GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIALGIEYM-QN 140
Query: 411 SRLKIIHRDLKPSNVLL-----DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
I+HRDL+ N+ L + + AK++DFG ++ Q + ++G + +MAP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 466 EY--AMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEF 523
E A E ++ K+D +SF +I+ I++G+ Y G + ++ + +EG
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEG----- 246
Query: 524 VDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ P + + P++ I LC DP RP S +V L
Sbjct: 247 LRPTIPEDCP-PRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 299 KLGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
K+G+G G V V +GK VAVK++ + Q E NE++++ QH N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ G+E ++ E + +L + + ++N + + + L LH +IH
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEYAMEGLFSV 475
RD+K ++LL D K+SDFG FC RR +VGT +MAPE +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 476 KSDVFSFGVIVLEIISGK 493
+ D++S G++V+E++ G+
Sbjct: 205 EVDIWSLGIMVIEMVDGE 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 120/228 (52%), Gaps = 21/228 (9%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK- 327
+ S E P L I T+ F LG G FGTVYKG+ +P G++V A+K L
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 328 SWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ 387
S + +E +E ++A + + ++ RL+G + +L I +LMP L ++ + + +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIG 122
Query: 388 ----LNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARI 443
LNW C I +KG+ YL ED RL +HRDL NVL+ KI+DFG+A++
Sbjct: 123 SQYLLNW--CVQI----AKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKL 173
Query: 444 FCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+K + +MA E + +++ +SDV+S+GV V E+++
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 299 KLGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
K+G+G G V V +GK VAVK++ + Q E NE++++ QH N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ G+E ++ E + +L + + ++N + + + L LH +IH
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEYAMEGLFSV 475
RD+K ++LL D K+SDFG FC RR +VGT +MAPE +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 476 KSDVFSFGVIVLEIISGK 493
+ D++S G++V+E++ G+
Sbjct: 207 EVDIWSLGIMVIEMVDGE 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 20/208 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ----LNWNTCYNIIGGISKG 403
++ RL+G + +L I +LMP L ++ + + + LNW C I +KG
Sbjct: 78 PHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNW--CVQI----AKG 130
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
+ YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +M
Sbjct: 131 MNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIIS 491
A E + +++ +SDV+S+GV V E+++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
LG+G +G VY G L N +A+K + + + + EI L L+H+N+V+ +G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
E + E +P SL + L+ N T I +GL YLH++ +I+HR
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 132
Query: 419 DLKPSNVLLDK-DMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL--FSV 475
D+K NVL++ V KISDFG ++ T GT YMAPE +G +
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDKGPRGYGK 190
Query: 476 KSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLL 508
+D++S G ++E+ +GK FY G Q +
Sbjct: 191 AADIWSLGCTIIEMATGK--PPFYELGEPQAAM 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 299 KLGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
K+G+G G V V +GK VAVK++ + Q E NE++++ QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ G+E ++ E + +L + + ++N + + + L LH +IH
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEYAMEGLFSV 475
RD+K ++LL D K+SDFG FC RR +VGT +MAPE +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 476 KSDVFSFGVIVLEIISGK 493
+ D++S G++V+E++ G+
Sbjct: 196 EVDIWSLGIMVIEMVDGE 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 299 KLGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
K+G+G G V V +GK VAVK++ + Q E NE++++ QH N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ G+E ++ E + +L + + ++N + + + L LH +IH
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEYAMEGLFSV 475
RD+K ++LL D K+SDFG FC RR +VGT +MAPE +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 476 KSDVFSFGVIVLEIISGK 493
+ D++S G++V+E++ G+
Sbjct: 200 EVDIWSLGIMVIEMVDGE 217
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 301 GQGGFGTVYKGVLPNGKEVAVKRL---SRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+G FG V+K L N VAVK ++SWQ + EI ++H NL++ +
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS----EREIFSTPGMKHENLLQFIAAE 78
Query: 358 IEGE----EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED--- 410
G E LI SL ++ + + WN ++ +S+GL YLHED
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 411 -----SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
+ I HRD K NVLL D+ A ++DFG+A F + +T VGT YMAP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 466 EYAMEGLFSVKSDVF------SFGVIVLEIIS 491
E +EG + + D F + G+++ E++S
Sbjct: 195 E-VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 81 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 136 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 30/211 (14%)
Query: 301 GQGGFGTVYKGVLPNGKEVAVKRL---SRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+G FG V+K L N + VAVK ++SWQ + E+ + ++H N+++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN----EYEVYSLPGMKHENILQFIGAE 87
Query: 358 IEGE----EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED--- 410
G + LI SL F+ + ++WN +I +++GL YLHED
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 411 ----SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
+ I HRD+K NVLL ++ A I+DFG+A F + +T VGT YMAPE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 467 YAMEGLFSVKSDVF------SFGVIVLEIIS 491
+EG + + D F + G+++ E+ S
Sbjct: 204 -VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 78 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 132
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 133 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 20/208 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ----LNWNTCYNIIGGISKG 403
++ RL+G + +L I +LMP L ++ + + + LNW C I +KG
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
+ YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +M
Sbjct: 130 MNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIIS 491
A E + +++ +SDV+S+GV V E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 77 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 80 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 87 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 141
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 142 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
FSD ++G G FG VY + N + VA+K++S Q E++++ E+ + KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHE 409
++ GC + L+ E + D + L + G +GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
+ +IHRD+K N+LL + + K+ DFG A I A VGT +MAPE +
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 470 ---EGLFSVKSDVFSFGVIVLEIISGK 493
EG + K DV+S G+ +E+ K
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 79 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 80 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
FSD ++G G FG VY + N + VA+K++S Q E++++ E+ + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHE 409
++ GC + L+ E + D + L + G +GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
+ +IHRD+K N+LL + + K+ DFG A I A VGT +MAPE +
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184
Query: 470 ---EGLFSVKSDVFSFGVIVLEIISGK 493
EG + K DV+S G+ +E+ K
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 80 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 71 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 126 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 80 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 79 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 102 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 156
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 157 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++ K+GQG GTVY + + G+EVA+++++ + E NEI+++ + ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDS---ERRLQLNWNTCYNIIGGISKGLLYLHE 409
+ + G+E ++ E + SL + ++ E ++ C + L +LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLHS 135
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEY 467
+ ++IHR++K N+LL D K++DFG FC ++R +VGT +MAPE
Sbjct: 136 N---QVIHRNIKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPEV 188
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGK 493
+ K D++S G++ +E+I G+
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 46/282 (16%)
Query: 300 LGQGGFGTVYKG--VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP ++VAV + K + + +F E ++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G G+ +++ E M N +LD F+ + + T ++G GI+ G+ YL +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQF-----TVIQLVGMLRGIAAGMRYLAD-- 163
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYG------YMAP 465
+ +HRDL N+L++ ++V K+SDFG++R+ ++ + T T G + AP
Sbjct: 164 -MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT-----TTGGKIPVRWTAP 217
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
E F+ SDV+S+G+++ E++S G+R Y Q ++ + +EG +
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAI----EEGYRL--- 267
Query: 525 DPLLMK-SSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
P M + + Q++ L C Q++ A RP +V +L
Sbjct: 268 -PAPMDCPAGLHQLM------LDCWQKERAERPKFEQIVGIL 302
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 20/208 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ----LNWNTCYNIIGGISKG 403
++ RL+G + +L I +LMP L ++ + + + LNW C I +KG
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKG 129
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
+ YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +M
Sbjct: 130 MNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIIS 491
A E + +++ +SDV+S+GV V E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 21/237 (8%)
Query: 267 LTQEGDLVS----SEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEV-- 319
L QE +LV S E P L I T+ F LG G FGTVYKG+ +P G++V
Sbjct: 21 LLQERELVEPLTPSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKI 79
Query: 320 --AVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLD 376
A+ L S + +E +E ++A + + ++ RL+G + +L I +LMP
Sbjct: 80 PVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMP---FG 135
Query: 377 CFIFDSERRLQLNWNTCY--NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAK 434
C + D R + N + Y N I+KG+ YL ED RL +HRDL NVL+ K
Sbjct: 136 CLL-DYVREHKDNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVK 191
Query: 435 ISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
I+DFG+A++ +K + +MA E + +++ +SDV+S+GV V E+++
Sbjct: 192 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 298 NKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+KLG G +G VY+GV VAVK L + + +EEF E ++ +++H NLV+L+G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+I E M +L ++ + R+ +++ + IS + YL + + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRDL N L+ ++ + K++DFG++R+ + TA+ + APE FS+K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAYNKFSIK 190
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
SDV++FGV++ EI + + ++ + + V++L ++ ME + P+
Sbjct: 191 SDVWAFGVLLWEIAT------YGMSPYPGIDPSQVYELLEKDYRME-------RPEGCPE 237
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNV 561
+ + C Q +P+ RP+ + +
Sbjct: 238 --KVYELMRACWQWNPSDRPSFAEI 260
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 10/210 (4%)
Query: 285 AVIKAATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLEEFKNEIILIA 343
++ K + F KLG+G +G+VYK + G+ VA+K++ +S L+E EI ++
Sbjct: 22 SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQ 79
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKG 403
+ ++V+ G + + ++ E S+ I R L + I+ KG
Sbjct: 80 QCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKG 137
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L YLH ++ IHRD+K N+LL+ + AK++DFG+A + N V+GT +M
Sbjct: 138 LEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWM 192
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
APE E ++ +D++S G+ +E+ GK
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 36/278 (12%)
Query: 300 LGQGGFGTVYKG--VLPNGKE--VAVKRL-SRKSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G FG V G LP +E VA+K L S + + +F +E ++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHEDS 411
G + ++I E M N SLD F+ ++ + T ++G GI+ G+ YL +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-----TVIQLVGMLRGIAAGMKYLAD-- 127
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG---TYGYMAPEYA 468
+ +HR L N+L++ ++V K+SDFG++R ++ +G + APE
Sbjct: 128 -MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPL 527
F+ SDV+S+G+++ E++S G+R Y Q ++ + Q ++ + P
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIEQDYR-------LPPP 236
Query: 528 LMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ S++ Q++ L C Q+D RP +V L
Sbjct: 237 MDCPSALHQLM------LDCWQKDRNHRPKFGQIVNTL 268
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 138/282 (48%), Gaps = 38/282 (13%)
Query: 299 KLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQG-------LEEFKNEIILIAKLQHRNL 350
++G+GGFG V+KG L K V A+K L +G +EF+ E+ +++ L H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
V+L G+ ++ E +P L + D ++ W+ ++ I+ G+ Y+ ++
Sbjct: 86 VKLY--GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIALGIEYM-QN 140
Query: 411 SRLKIIHRDLKPSNVLL-----DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
I+HRDL+ N+ L + + AK++DF +++ Q + ++G + +MAP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 466 EY--AMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEF 523
E A E ++ K+D +SF +I+ I++G+ Y G + ++ + +EG
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEG----- 246
Query: 524 VDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ P + + P++ I LC DP RP S +V L
Sbjct: 247 LRPTIPEDCP-PRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 118/226 (52%), Gaps = 17/226 (7%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK- 327
+ S E P L I T+ F LG G FGTVYKG+ +P G++V A+K L
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 328 SWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ 387
S + +E +E ++A + + ++ RL+G + +L I +LMP C + D R +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHK 118
Query: 388 LNWNTCY--NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
N + Y N I+KG+ YL ED RL +HRDL NVL+ KI+DFG A++
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLG 175
Query: 446 ENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+K + +MA E + +++ +SDV+S+GV V E+++
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
+G+G FG V K K+VA+K++ +S + + F E+ ++++ H N+V+L G +
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 360 GEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRD 419
L+ E SL + +E + S+G+ YLH +IHRD
Sbjct: 74 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 420 LKPSNVLL-DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
LKP N+LL V KI DFG A C+ Q + G+ +MAPE +S K D
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCD 186
Query: 479 VFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVV 538
VFS+G+I+ E+I+ +R + G A ++ V P L+K ++P+ +
Sbjct: 187 VFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAV---------HNGTRPPLIK--NLPKPI 234
Query: 539 RCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ C +DP+ RP+M +V ++
Sbjct: 235 ESLMT--RCWSKDPSQRPSMEEIVKIM 259
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 81 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG A++ +K + +MA
Sbjct: 136 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
+G+G FG V K K+VA+K++ +S + + F E+ ++++ H N+V+L G +
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 360 GEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRD 419
L+ E SL + +E + S+G+ YLH +IHRD
Sbjct: 73 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 420 LKPSNVLL-DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
LKP N+LL V KI DFG A C+ Q + G+ +MAPE +S K D
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCD 185
Query: 479 VFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVV 538
VFS+G+I+ E+I+ +R + G A ++ V P L+K ++P+ +
Sbjct: 186 VFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAV---------HNGTRPPLIK--NLPKPI 233
Query: 539 RCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ C +DP+ RP+M +V ++
Sbjct: 234 ESLMT--RCWSKDPSQRPSMEEIVKIM 258
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 128/299 (42%), Gaps = 56/299 (18%)
Query: 300 LGQGGFGTVYKGVL----PNGKEVAVKRLSR-KSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G N + A+K LSR Q +E F E +L+ L H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 355 GCGI--EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSR 412
G + EG +L+ M + L FI +R + + + +++G+ YL E
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYLAEQ-- 143
Query: 413 LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYAME 470
K +HRDL N +LD+ K++DFG+AR + + R + A E
Sbjct: 144 -KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 471 GLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPL--- 527
F+ KSDV+SFGV++ E+++ + +DP
Sbjct: 203 YRFTTKSDVWSFGVLLWELLT------------------------RGAPPYRHIDPFDLT 238
Query: 528 --LMKSSSIPQVVRC----IHIGLLCVQEDPAVRPTMSNVV--------ALLGSESIAL 572
L + +PQ C + C + DPAVRPT +V ALLG + L
Sbjct: 239 HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYVQL 297
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 79 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG A++ +K + +MA
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQG---LEEFKNEIILI 342
I + F N LG+G F VY+ + G EVA+K + +K+ ++ +NE+ +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 343 AKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
+L+H +++ L + L+ E+ N ++ ++ R + N + + I
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIIT 123
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
G+LYLH I+HRDL SN+LL ++M KI+DFG+A + T + GT Y
Sbjct: 124 GMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNY 178
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
++PE A ++SDV+S G + ++ G+
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 79 PHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG A++ +K + +MA
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG A++ +K + +MA
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 79 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG A++ +K + +MA
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 299 KLGQGGFGTVYKGVLPN-GKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV--RLV 354
+LG GGFG V + + + G++VA+K+ ++ S + E + EI ++ KL H N+V R V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 355 GCGIE----GEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
G++ + LL E L ++ E L ++ IS L YLHE+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 411 SRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
+IIHRDLKP N++L + ++ KI D G A+ + + VGT Y+APE
Sbjct: 141 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE---FVGTLQYLAPEL 194
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGKR 494
+ ++V D +SFG + E I+G R
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 299 KLGQGGFGTVYKGVLPN-GKEVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLV--RLV 354
+LG GGFG V + + + G++VA+K+ ++ S + E + EI ++ KL H N+V R V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 355 GCGIE----GEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
G++ + LL E L ++ E L ++ IS L YLHE+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 411 SRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
+IIHRDLKP N++L + ++ KI D G A+ + + VGT Y+APE
Sbjct: 142 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE---FVGTLQYLAPEL 195
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGKR 494
+ ++V D +SFG + E I+G R
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F LG G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I++G+
Sbjct: 74 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAEGMN 128
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 129 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 17/226 (7%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK- 327
+ S E P L I T+ F L G FGTVYKG+ +P G++V A+K L
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 328 SWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ 387
S + +E +E ++A + + ++ RL+G + +L I +LMP C + D R +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMP---FGCLL-DYVREHK 118
Query: 388 LNWNTCY--NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
N + Y N I+KG+ YL ED RL +HRDL NVL+ KI+DFG+A++
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 446 ENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+K + +MA E + +++ +SDV+S+GV V E+++
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 17/226 (7%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK- 327
+ S E P L I T+ F L G FGTVYKG+ +P G++V A+K L
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 328 SWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ 387
S + +E +E ++A + + ++ RL+G + +L I +LMP C + D R +
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHK 118
Query: 388 LNWNTCY--NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
N + Y N I+KG+ YL ED RL +HRDL NVL+ KI+DFG+A++
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 446 ENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+K + +MA E + +++ +SDV+S+GV V E+++
Sbjct: 176 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 35/277 (12%)
Query: 300 LGQGGFGTVYKGVLPNGK----EVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRLV 354
LG+G FG VY+GV N K VAVK + + E+F +E +++ L H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G IE E +I EL P L ++ ++ L++ Y++ I K + YL +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 129
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ N+L+ K+ DFG++R + E++ +M+PE F+
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 475 VKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
SDV+ F V + EI+S + F W E K+ V +L K +
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFF----------------WLENKD---VIGVLEKGDRL 229
Query: 535 PQVVRC----IHIGLLCVQEDPAVRPTMSNVVALLGS 567
P+ C + C DP+ RP + +V L
Sbjct: 230 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 266
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQH 347
F L G FGTVYKG+ +P G++V A+K L S + +E +E ++A + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY--NIIGGISKGLL 405
++ RL+G + +L I +LMP C + D R + N + Y N I+KG+
Sbjct: 77 PHVCRLLGICLTSTVQL-ITQLMP---FGCLL-DYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL ED RL +HRDL NVL+ KI+DFG+A++ +K + +MA
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIIS 491
E + +++ +SDV+S+GV V E+++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTA--NTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + + N +MA E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 37/278 (13%)
Query: 300 LGQGGFGTVYKGVLPNGK----EVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRLV 354
LG+G FG VY+GV N K VAVK + + E+F +E +++ L H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G IE E +I EL P L ++ ++ L++ Y++ I K + YL +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 145
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMAR-IFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
+HRD+ N+L+ K+ DFG++R I E+ A+ R+ +M+PE F
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 203
Query: 474 SVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSS 533
+ SDV+ F V + EI+S + F W E K+ V +L K
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFF----------------WLENKD---VIGVLEKGDR 244
Query: 534 IPQVVRC----IHIGLLCVQEDPAVRPTMSNVVALLGS 567
+P+ C + C DP+ RP + +V L
Sbjct: 245 LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 282
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 37/278 (13%)
Query: 300 LGQGGFGTVYKGVLPNGK----EVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRLV 354
LG+G FG VY+GV N K VAVK + + E+F +E +++ L H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G IE E +I EL P L ++ ++ L++ Y++ I K + YL +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMAR-IFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
+HRD+ N+L+ K+ DFG++R I E+ A+ R+ +M+PE F
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 191
Query: 474 SVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSS 533
+ SDV+ F V + EI+S + F W E K+ V +L K
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFF----------------WLENKD---VIGVLEKGDR 232
Query: 534 IPQVVRC----IHIGLLCVQEDPAVRPTMSNVVALLGS 567
+P+ C + C DP+ RP + +V L
Sbjct: 233 LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 270
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 21/201 (10%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAV----KRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+LG G FG VYK KE +V K + KS + LE++ EI ++A H N+V+L+
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
++ E ++D + + ER L + + L YLH++ K
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR-RVVGTYGYMAPEYAM---- 469
IIHRDLK N+L D K++DFG++ +N +T R +GT +MAPE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 470 -EGLFSVKSDVFSFGVIVLEI 489
+ + K+DV+S G+ ++E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 13/210 (6%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSW-QGLEEFK-NEIILIAKL 345
+ + + K+G+G +G VYK G+ VA+KR+ + +G+ EI L+ +L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V L+ I E L L++E M + L + +++ LQ + Y + + +G+
Sbjct: 77 HHPNIVSLIDV-IHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIY--LYQLLRGV 132
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H+ +I+HRDLKP N+L++ D K++DFG+AR F ++ T VV T Y A
Sbjct: 133 AHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-THEVV-TLWYRA 187
Query: 465 PEYAM-EGLFSVKSDVFSFGVIVLEIISGK 493
P+ M +S D++S G I E+I+GK
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 13/199 (6%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSW-QGLEEFK-NEIILIAKLQHRNLVRLVGC 356
K+G+G +G VYK G+ VA+KR+ + +G+ EI L+ +L H N+V L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 357 GIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
I E L L++E M + L + +++ LQ + Y + + +G+ + H+ +I
Sbjct: 88 -IHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQH---RI 140
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM-EGLFS 474
+HRDLKP N+L++ D K++DFG+AR F ++ T VV T Y AP+ M +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-THEVV-TLWYRAPDVLMGSKKYS 198
Query: 475 VKSDVFSFGVIVLEIISGK 493
D++S G I E+I+GK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 167
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 130/271 (47%), Gaps = 27/271 (9%)
Query: 280 PFVHLAVI--KAATDGF---SDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLE 333
PF H V + A + F S + LG G FG V+K G ++A K + + + E
Sbjct: 72 PFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE 131
Query: 334 EFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTC 393
E KNEI ++ +L H NL++L + +L+ E + L I D L +T
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLT-ELDTI 190
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVL-LDKDMVA-KISDFGMARIFCENQKTA 451
+ I +G+ ++H+ + I+H DLKP N+L +++D KI DFG+AR + +K
Sbjct: 191 L-FMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTL---L 508
+ GT ++APE S +D++S GVI ++SG S F A+TL L
Sbjct: 245 -LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL--SPFLGDNDAETLNNIL 301
Query: 509 AYVWQLWKE------GKEMEFVDPLLMKSSS 533
A W L E + EF+ LL+K S
Sbjct: 302 ACRWDLEDEEFQDISEEAKEFISKLLIKEKS 332
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VAVK + S +EF E + KL H LV+ G
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLN--WNTCYNIIGGISKGLLYLHEDSRLKI 415
+ ++ E + N L ++ + L+ + CY++ G++ L H+
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA--FLESHQ-----F 125
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYAMEGL 472
IHRDL N L+D+D+ K+SDFGM R ++Q ++ VGT + APE
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYFK 181
Query: 473 FSVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKS 531
+S KSDV++FG+++ E+ S GK Y ++ +L++ + S
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH----------LAS 231
Query: 532 SSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
+I Q++ C E P RPT +++
Sbjct: 232 DTIYQIMYS------CWHELPEKRPTFQQLLS 257
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 25/269 (9%)
Query: 271 GDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTV----YKGVLPN-GKEVAVKRLS 325
GD+VS E+ P + LG+G FG V Y N G++VAVK L
Sbjct: 1 GDIVS-EKKPATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK 59
Query: 326 RKSW-QGLEEFKNEIILIAKLQHRNLVRLVG-CGIEGEEKL-LIYELMPNRSLDCFIFDS 382
+S + + K EI ++ L H N+V+ G C +G + LI E +P+ SL ++ +
Sbjct: 60 PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 119
Query: 383 ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR 442
+ ++ L Y + I KG+ YL SR + +HRDL NVL++ + KI DFG+ +
Sbjct: 120 KNKINLKQQLKYAV--QICKGMDYL--GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTK 174
Query: 443 IFCENQK--TANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII----SGKRNS 496
+++ T R + Y APE M+ F + SDV+SFGV + E++ S
Sbjct: 175 AIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM 233
Query: 497 GFYLT----GHAQTLLAYVWQLWKEGKEM 521
+L H Q + + KEGK +
Sbjct: 234 ALFLKMIGPTHGQMTVTRLVNTLKEGKRL 262
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLV 351
F+ +++G+G FG VYKG+ + KEV A+K + ++ +E+ + EI ++++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
R G ++ + +I E + S D + L I+ I KGL YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
+ IHRD+K +NVLL + K++DFG+A + Q N VGT +MAPE +
Sbjct: 137 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQS 191
Query: 472 LFSVKSDVFSFGVIVLEIISGK 493
+ K+D++S G+ +E+ G+
Sbjct: 192 AYDFKADIWSLGITAIELAKGE 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 26/276 (9%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VA+K + S +EF E ++ L H LV+L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ +I E M N L ++ + R Q + + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLESK---QFLH 143
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYAMEGLFS 474
RDL N L++ V K+SDFG++R ++++T++ VG+ + PE M FS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS----VGSKFPVRWSPPEVLMYSKFS 199
Query: 475 VKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSS 533
KSD+++FGV++ EI S GK + +A +L++ P L
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASEKV 250
Query: 534 IPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
+ C H E P + +SN++ ++ ES
Sbjct: 251 YTIMYSCWHEK---ADERPTFKILLSNILDVMDEES 283
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
+G+G FG V G G +VAVK + + + F E ++ +L+H NLV+L+G +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 360 GEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
+ L ++ E M SL ++ S R L + + + + YL ++ +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL NVL+ +D VAK+SDFG+ + E T +T ++ + APE E FS KSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREAAFSTKSD 187
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI S R
Sbjct: 188 VWSFGILLWEIYSFGR 203
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 300 LGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEE--FKNEIILIAKLQHRNLVRLVGC 356
LG+G FG V K +E AVK +++ S + + E+ L+ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSE-RRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ ++ EL L FD +R + + + II + G+ Y+H+ + I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 416 IHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
+HRDLKP N+LL +KD KI DFG++ F +N K + +GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGT 198
Query: 473 FSVKSDVFSFGVIVLEIISG 492
+ K DV+S GVI+ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L C + E+ N L +I R++ TC I L Y
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 152
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 300 LGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEE--FKNEIILIAKLQHRNLVRLVGC 356
LG+G FG V K +E AVK +++ S + + E+ L+ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSE-RRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ ++ EL L FD +R + + + II + G+ Y+H+ + I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 416 IHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
+HRDLKP N+LL +KD KI DFG++ F +N K + +GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGT 198
Query: 473 FSVKSDVFSFGVIVLEIISG 492
+ K DV+S GVI+ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 300 LGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEE--FKNEIILIAKLQHRNLVRLVGC 356
LG+G FG V K +E AVK +++ S + + E+ L+ KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSE-RRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ ++ EL L FD +R + + + II + G+ Y+H+ + I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 416 IHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
+HRDLKP N+LL +KD KI DFG++ F +N K + +GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGT 198
Query: 473 FSVKSDVFSFGVIVLEIISG 492
+ K DV+S GVI+ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VA+K + S +EF E ++ L H LV+L G
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ +I E M N L ++ + R Q + + + + YL + +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLESK---QFLH 127
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYAMEGLFS 474
RDL N L++ V K+SDFG++R +++ T++ VG+ + PE M FS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFS 183
Query: 475 VKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSS 533
KSD+++FGV++ EI S GK + +A +L++ P L
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASEKV 234
Query: 534 IPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
+ C H E P + +SN++ ++ ES
Sbjct: 235 YTIMYSCWHEK---ADERPTFKILLSNILDVMDEES 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
+G+G FG V G G +VAVK + + + F E ++ +L+H NLV+L+G +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 360 GEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
+ L ++ E M SL ++ S R L + + + + YL ++ +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL NVL+ +D VAK+SDFG+ + E T +T ++ + APE E FS KSD
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSD 368
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI S R
Sbjct: 369 VWSFGILLWEIYSFGR 384
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VA+K + S +EF E ++ L H LV+L G
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ +I E M N L ++ + R Q + + + + YL + +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLESK---QFLH 123
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYAMEGLFS 474
RDL N L++ V K+SDFG++R +++ T++ VG+ + PE M FS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFS 179
Query: 475 VKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSS 533
KSD+++FGV++ EI S GK + +A +L++ P L
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASEKV 230
Query: 534 IPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
+ C H E P + +SN++ ++ ES
Sbjct: 231 YTIMYSCWHEK---ADERPTFKILLSNILDVMDEES 263
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 300 LGQGGFGTVYKGVL--PNGKEV--AVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG VY G L +GK++ AVK L+R + G + +F E I++ H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 355 GCGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG---GISKGLLYLHED 410
G + E L++ M + L FI R + + T ++IG ++KG+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--KTANTRRVVGTYGYMAPEYA 468
+ K +HRDL N +LD+ K++DFG+AR + + N +MA E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 469 MEGLFSVKSDVFSFGVIVLEIIS 491
F+ KSDV+SFGV++ E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VA+K + S +EF E ++ L H LV+L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ +I E M N L ++ + R Q + + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLESK---QFLH 143
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYAMEGLFS 474
RDL N L++ V K+SDFG++R +++ T++ VG+ + PE M FS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFS 199
Query: 475 VKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSS 533
KSD+++FGV++ EI S GK + +A +L++ P L
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASEKV 250
Query: 534 IPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
+ C H E P + +SN++ ++ ES
Sbjct: 251 YTIMYSCWHEK---ADERPTFKILLSNILDVMDEES 283
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 24/240 (10%)
Query: 300 LGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V Y N G++VAVK L +S + + K EI ++ L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 354 VGCGIE--GEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
G E G LI E +P+ SL ++ ++ ++ L Y + I KG+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV--QICKGMDYL--GS 132
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK--TANTRRVVGTYGYMAPEYAM 469
R + +HRDL NVL++ + KI DFG+ + +++ T R + Y APE M
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 190
Query: 470 EGLFSVKSDVFSFGVIVLEII----SGKRNSGFYLT----GHAQTLLAYVWQLWKEGKEM 521
+ F + SDV+SFGV + E++ S +L H Q + + KEGK +
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 250
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VA+K + S +EF E ++ L H LV+L G
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ +I E M N L ++ + R Q + + + + YL + +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLESK---QFLH 134
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYAMEGLFS 474
RDL N L++ V K+SDFG++R +++ T++ VG+ + PE M FS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFS 190
Query: 475 VKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSS 533
KSD+++FGV++ EI S GK + +A +L++ P L
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------PHLASEKV 241
Query: 534 IPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
+ C H E P + +SN++ ++ ES
Sbjct: 242 YTIMYSCWHEK---ADERPTFKILLSNILDVMDEES 274
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
+G+G FG V G G +VAVK + + + F E ++ +L+H NLV+L+G +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 360 GEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
+ L ++ E M SL ++ S R L + + + + YL ++ +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL NVL+ +D VAK+SDFG+ + E T +T ++ + APE E FS KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSD 181
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI S R
Sbjct: 182 VWSFGILLWEIYSFGR 197
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 111/204 (54%), Gaps = 24/204 (11%)
Query: 300 LGQGGFGTVYKGV-LPNGKEV----AVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVRL 353
LG G FGTVYKG+ +P+G+ V A+K L S + +E +E ++A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ----LNWNTCYNIIGGISKGLLYLHE 409
+G + +L + +LMP L + ++ RL LNW C I +KG+ YL E
Sbjct: 85 LGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW--CMQI----AKGMSYL-E 136
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVGTYGYMAPEY 467
D RL +HRDL NVL+ KI+DFG+AR+ E + A+ +V +MA E
Sbjct: 137 DVRL--VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALES 192
Query: 468 AMEGLFSVKSDVFSFGVIVLEIIS 491
+ F+ +SDV+S+GV V E+++
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAV----KRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+LG G FG VYK KE +V K + KS + LE++ EI ++A H N+V+L+
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
++ E ++D + + ER L + + L YLH++ K
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR-RVVGTYGYMAPEYAM---- 469
IIHRDLK N+L D K++DFG++ +N + R +GT +MAPE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 470 -EGLFSVKSDVFSFGVIVLEI 489
+ + K+DV+S G+ ++E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
+G+G FG V G G +VAVK + + + F E ++ +L+H NLV+L+G +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 360 GEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
+ L ++ E M SL ++ S R L + + + + YL ++ +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSD 478
DL NVL+ +D VAK+SDFG+ + E T +T ++ + APE E FS KSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSD 196
Query: 479 VFSFGVIVLEIISGKR 494
V+SFG+++ EI S R
Sbjct: 197 VWSFGILLWEIYSFGR 212
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAV----KRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+LG G FG VYK KE +V K + KS + LE++ EI ++A H N+V+L+
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
++ E ++D + + ER L + + L YLH++ K
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR-RVVGTYGYMAPEYAM---- 469
IIHRDLK N+L D K++DFG++ +N + R +GT +MAPE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 470 -EGLFSVKSDVFSFGVIVLEI 489
+ + K+DV+S G+ ++E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VA+K + S +EF E ++ L H LV+L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ +I E M N L ++ + R Q + + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLESK---QFLH 128
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKS 477
RDL N L++ V K+SDFG++R +++ T+ +R + PE M FS KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 478 DVFSFGVIVLEIIS 491
D+++FGV++ EI S
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 120/291 (41%), Gaps = 49/291 (16%)
Query: 300 LGQGGFGTVYKGVLP-----NGKEVAVKRLS-------RKSWQGLEEFKNEIILIAKLQH 347
LG+G FG V G+ VAVK L R WQ EI ++ L H
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ------REIEILRTLYH 70
Query: 348 RNLVRLVGCGIEGEEK--LLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
++V+ GC + EK L+ E +P SL D R + I +G+
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMA 126
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMA 464
YLH IHR L NVLLD D + KI DFG+A+ E + R + + A
Sbjct: 127 YLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIIS------GKRNSGFYLTGHAQTLLAYVWQLWKEG 518
PE E F SDV+SFGV + E+++ L GH Q + +
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL------- 236
Query: 519 KEMEFVDPLLMKSSSIPQVVRC----IHIGLLCVQEDPAVRPTMSNVVALL 565
+ LL + +P+ RC H+ C + + + RPT N+V +L
Sbjct: 237 ----RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 298 NKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRLVG 355
++G+G FG V+ G L + VAVK L+ +F E ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL+ F+ RL++ T ++G + G+ YL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLESKC---C 234
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSV 475
IHRDL N L+ + V KISDFGM+R + A+ + APE G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 476 KSDVFSFGVIVLEIIS 491
+SDV+SFG+++ E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 21/201 (10%)
Query: 299 KLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG VYK G A K + KS + LE++ EI ++A H +V+L+G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRL---QLNWNTCYNIIGGISKGLLYLHEDSRLK 414
+ ++ E P ++D + + +R L Q+ C ++ + L +LH +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-VVCRQML----EALNFLHSK---R 129
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR-RVVGTYGYMAPEYAM---- 469
IIHRDLK NVL+ + +++DFG++ +N KT R +GT +MAPE M
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 470 -EGLFSVKSDVFSFGVIVLEI 489
+ + K+D++S G+ ++E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 21/201 (10%)
Query: 299 KLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG VYK G A K + KS + LE++ EI ++A H +V+L+G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRL---QLNWNTCYNIIGGISKGLLYLHEDSRLK 414
+ ++ E P ++D + + +R L Q+ C ++ + L +LH +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-VVCRQML----EALNFLHSK---R 137
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR-RVVGTYGYMAPEYAM---- 469
IIHRDLK NVL+ + +++DFG++ +N KT R +GT +MAPE M
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 470 -EGLFSVKSDVFSFGVIVLEI 489
+ + K+D++S G+ ++E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 120/291 (41%), Gaps = 49/291 (16%)
Query: 300 LGQGGFGTVYKGVLP-----NGKEVAVKRLS-------RKSWQGLEEFKNEIILIAKLQH 347
LG+G FG V G+ VAVK L R WQ EI ++ L H
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ------REIEILRTLYH 69
Query: 348 RNLVRLVGCGIEGEEK--LLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
++V+ GC + EK L+ E +P SL D R + I +G+
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMA 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMA 464
YLH IHR L NVLLD D + KI DFG+A+ E + R + + A
Sbjct: 126 YLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIIS------GKRNSGFYLTGHAQTLLAYVWQLWKEG 518
PE E F SDV+SFGV + E+++ L GH Q + +
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL------- 235
Query: 519 KEMEFVDPLLMKSSSIPQVVRC----IHIGLLCVQEDPAVRPTMSNVVALL 565
+ LL + +P+ RC H+ C + + + RPT N+V +L
Sbjct: 236 ----RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + A L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 47/278 (16%)
Query: 300 LGQGGFGTVYKGV-LPNGKE----VAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRL 353
LG G FGTV+KGV +P G+ V +K + KS Q + + ++ I L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERR--------LQLNWNTCYNIIGGISKGLL 405
+G G L+ + +P SL D R+ L LNW I+KG+
Sbjct: 99 LGL-CPGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQ------IAKGMY 147
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL E ++HR+L NVLL +++DFG+A + + K +MA
Sbjct: 148 YLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E G ++ +SDV+S+GV V E+++ F +A LA V L ++G+ +
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMT------FGAEPYAGLRLAEVPDLLEKGERL---- 254
Query: 526 PLLMKSSSIPQV--VRCIHIGLLCVQEDPAVRPTMSNV 561
+ PQ+ + + + C D +RPT +
Sbjct: 255 -------AQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 22/198 (11%)
Query: 303 GGFGTVYKGVLPNGKEVAV----KRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
G FG VYK KE +V K + KS + LE++ EI ++A H N+V+L+
Sbjct: 21 GDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 359 EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHR 418
++ E ++D + + ER L + + L YLH++ KIIHR
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDN---KIIHR 132
Query: 419 DLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYMAPEYAM-----EG 471
DLK N+L D K++DFG++ +N +T RR +GT +MAPE M +
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 472 LFSVKSDVFSFGVIVLEI 489
+ K+DV+S G+ ++E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 298 NKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRLVG 355
++G+G FG V+ G L + VAVK L+ +F E ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL+ F+ RL++ T ++G + G+ YL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK--TLLQMVGDAAAGMEYLESKC---C 234
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSV 475
IHRDL N L+ + V KISDFGM+R + A+ + APE G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 476 KSDVFSFGVIVLEIIS 491
+SDV+SFG+++ E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+LG G FG V G +VA+K + S +EF E ++ L H LV+L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ +I E M N L ++ + R Q + + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLESK---QFLH 128
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT---YGYMAPEYAMEGLFS 474
RDL N L++ V K+SDFG++R +++ T++ VG+ + PE M FS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFS 184
Query: 475 VKSDVFSFGVIVLEIIS 491
KSD+++FGV++ EI S
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 47/278 (16%)
Query: 300 LGQGGFGTVYKGV-LPNGKE----VAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRL 353
LG G FGTV+KGV +P G+ V +K + KS Q + + ++ I L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERR--------LQLNWNTCYNIIGGISKGLL 405
+G G L+ + +P SL D R+ L LNW I+KG+
Sbjct: 81 LGL-CPGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQ------IAKGMY 129
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YL E ++HR+L NVLL +++DFG+A + + K +MA
Sbjct: 130 YLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E G ++ +SDV+S+GV V E+++ F +A LA V L ++G+ +
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMT------FGAEPYAGLRLAEVPDLLEKGERL---- 236
Query: 526 PLLMKSSSIPQV--VRCIHIGLLCVQEDPAVRPTMSNV 561
+ PQ+ + + + C D +RPT +
Sbjct: 237 -------AQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLV 351
F+ ++G+G FG V+KG+ ++V A+K + ++ +E+ + EI ++++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ G ++G + +I E + S D R + ++ I KGL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
+ IHRD+K +NVLL + K++DFG+A + Q NT VGT +MAPE +
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQS 195
Query: 472 LFSVKSDVFSFGVIVLEIISGK 493
+ K+D++S G+ +E+ G+
Sbjct: 196 AYDSKADIWSLGITAIELAKGE 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E S SD+++ G I+ ++++G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 37/287 (12%)
Query: 300 LGQGGFGTVYKGVLP-----NGKEVAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V G+ VAVK L Q +K EI ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 354 VGC-GIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
GC +GE+ L L+ E +P SL ++ R + I +G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHSQH 137
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
IHR+L NVLLD D + KI DFG+A+ E + R + + APE E
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 471 GLFSVKSDVFSFGVIVLEIISGKRNSG------FYLTGHAQTLLAYVWQLWKEGKEMEFV 524
F SDV+SFGV + E+++ +S L G AQ + + +
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL-----------RL 243
Query: 525 DPLLMKSSSIPQVVRC----IHIGLLCVQEDPAVRPTMSNVVALLGS 567
LL + +P+ +C H+ C + + + RPT N++ +L +
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 37/287 (12%)
Query: 300 LGQGGFGTVYKGVLP-----NGKEVAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V G+ VAVK L Q +K EI ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 354 VGC-GIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
GC +GE+ L L+ E +P SL ++ R + I +G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQH 137
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
IHR+L NVLLD D + KI DFG+A+ E + R + + APE E
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 471 GLFSVKSDVFSFGVIVLEIISGKRNSG------FYLTGHAQTLLAYVWQLWKEGKEMEFV 524
F SDV+SFGV + E+++ +S L G AQ + + +
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL-----------RL 243
Query: 525 DPLLMKSSSIPQVVRC----IHIGLLCVQEDPAVRPTMSNVVALLGS 567
LL + +P+ +C H+ C + + + RPT N++ +L +
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIA 343
K + F LG+G F TV L +E A+K L ++ + E +++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISK 402
+L H V+L + E+ N L +I R++ TC I
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVS 121
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
L YLH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++PE E SD+++ G I+ ++++G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 23/218 (10%)
Query: 287 IKAATDGFSDSNK----LGQGGFGTVY--KGVLPNGKEVAVKRLSR---KSWQGLEEFKN 337
++ +T FSD K LG+G FG V K + G+E AVK +S+ K E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 81
Query: 338 EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
E+ L+ +L H N+++L + L+ E+ L I +R +++ II
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 138
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTR 454
+ G+ Y+H++ KI+HRDLKP N+LL+ KD +I DFG++ F ++K +
Sbjct: 139 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK- 194
Query: 455 RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+GT Y+APE + G + K DV+S GVI+ ++SG
Sbjct: 195 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIA 343
K + F LG+G F TV L +E A+K L ++ + E +++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISK 402
+L H V+L + E+ N L +I R++ TC I
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVS 120
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
L YLH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++PE E SD+++ G I+ ++++G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 23/218 (10%)
Query: 287 IKAATDGFSDSNK----LGQGGFGTVY--KGVLPNGKEVAVKRLSR---KSWQGLEEFKN 337
++ +T FSD K LG+G FG V K + G+E AVK +S+ K E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 75
Query: 338 EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
E+ L+ +L H N+++L + L+ E+ L I +R +++ II
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 132
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTR 454
+ G+ Y+H++ KI+HRDLKP N+LL+ KD +I DFG++ F ++K +
Sbjct: 133 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK- 188
Query: 455 RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+GT Y+APE + G + K DV+S GVI+ ++SG
Sbjct: 189 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIA 343
K + F LG+G F TV L +E A+K L ++ + E +++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISK 402
+L H V+L + E+ N L +I R++ TC I
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVS 119
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
L YLH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++PE E SD+++ G I+ ++++G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQ-GLEEFKNEIILIAKLQHRN 349
D + +G G V P ++VA+KR++ + Q ++E EI +++ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRS----LDCFIFDSERRLQ-LNWNTCYNIIGGISKGL 404
+V + +E L+ +L+ S + + E + L+ +T I+ + +GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK-TANTRR--VVGTYG 461
YLH++ + IHRD+K N+LL +D +I+DFG++ T N R VGT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 462 YMAPEYAMEGL--FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGK 519
+MAPE ME + + K+D++SFG+ +E+ +G + Y +L Q
Sbjct: 187 WMAPE-VMEQVRGYDFKADIWSFGITAIELATG---AAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 520 EMEFVDPLLMKS--SSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
E D ++K S +++ LC+Q+DP RPT + ++
Sbjct: 243 ETGVQDKEMLKKYGKSFRKMIS------LCLQKDPEKRPTAAELL 281
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIA 343
K + F LG+G F TV L +E A+K L ++ + E +++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISK 402
+L H V+L + E+ N L +I R++ TC I
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVS 118
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
L YLH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++PE E SD+++ G I+ ++++G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 33/221 (14%)
Query: 300 LGQGGFGTVYK----GVLPNGK--EVAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVR 352
+G+G FG V++ G+LP VAVK L ++ ++ +F+ E L+A+ + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFI-------------FDSERRLQLNWN-----TCY 394
L+G G+ L++E M L+ F+ D R +++ +C
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 395 N---IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR-IFCENQKT 450
I ++ G+ YL E K +HRDL N L+ ++MV KI+DFG++R I+ +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 451 ANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
A+ + +M PE ++ +SDV+++GV++ EI S
Sbjct: 232 ADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFK----NEIILIAK 344
AT + ++G G +GTVYK P+ G VA+K S + G E E+ L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 345 LQ---HRNLVRLVG-CGIEGEEK----LLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
L+ H N+VRL+ C ++ L++E + ++ L ++ D L T ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDL 117
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
+ +GL +LH + I+HRDLKP N+L+ K++DFG+ARI+ A V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---V 171
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
V T Y APE ++ ++ D++S G I E+ K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 37/285 (12%)
Query: 300 LGQGGFGTVYKGVLP-----NGKEVAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V G+ VAVK L + Q +K EI ++ L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 354 VGCGIE-GEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
GC + G L L+ E +P SL ++ R + I +G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQH 154
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT-YGYMAPEYAME 470
IHRDL NVLLD D + KI DFG+A+ E + R + + APE E
Sbjct: 155 ---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 471 GLFSVKSDVFSFGVIVLEIISGKRNSG------FYLTGHAQTLLAYVWQLWKEGKEMEFV 524
F SDV+SFGV + E+++ +S L G AQ + + +
Sbjct: 212 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL-----------RL 260
Query: 525 DPLLMKSSSIPQVVRC----IHIGLLCVQEDPAVRPTMSNVVALL 565
LL + +P+ +C H+ C + + + RPT N++ +L
Sbjct: 261 TELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 73 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 125
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 186 PVDVWSCGIVLTAMLAGE 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQ-GLEEFKNEIILIAKLQHRN 349
D + +G G V P ++VA+KR++ + Q ++E EI +++ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRS----LDCFIFDSERRLQ-LNWNTCYNIIGGISKGL 404
+V + +E L+ +L+ S + + E + L+ +T I+ + +GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK-TANTRR--VVGTYG 461
YLH++ + IHRD+K N+LL +D +I+DFG++ T N R VGT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 462 YMAPEYAMEGL--FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGK 519
+MAPE ME + + K+D++SFG+ +E+ +G + Y +L Q
Sbjct: 192 WMAPE-VMEQVRGYDFKADIWSFGITAIELATG---AAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 520 EMEFVDPLLMKS--SSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
E D ++K S +++ LC+Q+DP RPT + ++
Sbjct: 248 ETGVQDKEMLKKYGKSFRKMIS------LCLQKDPEKRPTAAELL 286
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 23/218 (10%)
Query: 287 IKAATDGFSDSNK----LGQGGFGTVY--KGVLPNGKEVAVKRLSR---KSWQGLEEFKN 337
++ +T FSD K LG+G FG V K + G+E AVK +S+ K E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 98
Query: 338 EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
E+ L+ +L H N+++L + L+ E+ L I +R +++ II
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 155
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTR 454
+ G+ Y+H++ KI+HRDLKP N+LL+ KD +I DFG++ F ++K +
Sbjct: 156 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK- 211
Query: 455 RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+GT Y+APE + G + K DV+S GVI+ ++SG
Sbjct: 212 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 23/218 (10%)
Query: 287 IKAATDGFSDSNK----LGQGGFGTVY--KGVLPNGKEVAVKRLSR---KSWQGLEEFKN 337
++ +T FSD K LG+G FG V K + G+E AVK +S+ K E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 99
Query: 338 EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
E+ L+ +L H N+++L + L+ E+ L I +R +++ II
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 156
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTR 454
+ G+ Y+H++ KI+HRDLKP N+LL+ KD +I DFG++ F ++K +
Sbjct: 157 RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK- 212
Query: 455 RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+GT Y+APE + G + K DV+S GVI+ ++SG
Sbjct: 213 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 150
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 148
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQGLEEFK-----NEIILIAKL 345
+ F LG+G F TV L +E A+K L ++ ++E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGL 404
H V+L + E+ N L +I R++ TC I L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSAL 145
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YLH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISG 492
PE E SD+++ G I+ ++++G
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 129
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 148
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGT-VYKGVLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F T V L +E A+K L ++ + E ++++L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 144
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 122/271 (45%), Gaps = 36/271 (13%)
Query: 299 KLGQGGFGTVYKGVL--PNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNLV 351
KLG G FG V +G P+GK V+V K + +++F E+ + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW--NTCYNIIGGISKGLLYLHE 409
RL G + K+ + EL P SL D R+ Q ++ T +++G+ YL
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYGYMAPE 466
+ IHRDL N+LL + KI DFG+ R +N R+V + + APE
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPE 188
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDP 526
FS SD + FGV + E+ + + L G +Q L ++ KEG+
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILH----KIDKEGER------ 237
Query: 527 LLMKSSSIPQVVRCIHIGLLCVQEDPAVRPT 557
L + PQ + ++ + C P RPT
Sbjct: 238 -LPRPEDCPQDI--YNVMVQCWAHKPEDRPT 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 298 NKLGQGGFGTVYKGVL--PNGK--EVAVKRLSRKSW---QGLEEFKNEIILIAKLQHRNL 350
KLG G FG V +G P+GK VAVK L + +++F E+ + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW--NTCYNIIGGISKGLLYLH 408
+RL G + K+ + EL P SL D R+ Q ++ T +++G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYGYMAP 465
+ IHRDL N+LL + KI DFG+ R +N R+V + + AP
Sbjct: 129 SK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAP 183
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E FS SD + FGV + E+ + + L G +Q L ++ KEG+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILH----KIDKEGER----- 233
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPT 557
L + PQ + + + C P RPT
Sbjct: 234 --LPRPEDCPQDIYNVMVQ--CWAHKPEDRPT 261
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G +G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 298 NKLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++LG+G FG+V Y + N G VAVK+L +F+ EI ++ L +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 353 LVGC--GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
G G E L+ E +P+ L F+ RL + Y+ I KG+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS--SQICKGMEYL--G 128
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAM 469
SR + +HRDL N+L++ + KI+DFG+A++ ++ R + APE
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 470 EGLFSVKSDVFSFGVIVLEIIS 491
+ +FS +SDV+SFGV++ E+ +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQH 347
+ F LG+G F TV L +E A+K L ++ + E ++++L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGLLY 406
V+L + E+ N L +I R++ TC I L Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 144
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
E SD+++ G I+ ++++G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 298 NKLGQGGFGTVYKGVL--PNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNL 350
KLG G FG V +G P+GK V+V K + +++F E+ + L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW--NTCYNIIGGISKGLLYLH 408
+RL G + K+ + EL P SL D R+ Q ++ T +++G+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYGYMAP 465
+ IHRDL N+LL + KI DFG+ R +N R+V + + AP
Sbjct: 139 SK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAP 193
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E FS SD + FGV + E+ + + L G +Q L ++ KEG+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILH----KIDKEGER----- 243
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPT 557
L + PQ + + + C P RPT
Sbjct: 244 --LPRPEDCPQDIYNVMVQ--CWAHKPEDRPT 271
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 298 NKLGQGGFGTVYKGVL--PNGK--EVAVKRLSR---KSWQGLEEFKNEIILIAKLQHRNL 350
KLG G FG V +G P+GK VAVK L + +++F E+ + L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW--NTCYNIIGGISKGLLYLH 408
+RL G + K+ + EL P SL D R+ Q ++ T +++G+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYGYMAP 465
+ IHRDL N+LL + KI DFG+ R +N R+V + + AP
Sbjct: 139 SK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWCAP 193
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E FS SD + FGV + E+ + + L G +Q L ++ KEG+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILH----KIDKEGER----- 243
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPT 557
L + PQ + + + C P RPT
Sbjct: 244 --LPRPEDCPQDIYNVMVQ--CWAHKPEDRPT 271
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 292 DGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQGLEEFK-----NEIILIAKL 345
+ F LG+G F TV L +E A+K L ++ ++E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRL 89
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISKGL 404
H V+L + E+ N L +I R++ TC I L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSAL 145
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
YLH IIHRDLKP N+LL++DM +I+DFG A++ K A VGT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISG 492
PE E SD+++ G I+ ++++G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 298 NKLGQGGFGTVYKGVL--PNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNL 350
KLG G FG V +G P+GK V+V K + +++F E+ + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW--NTCYNIIGGISKGLLYLH 408
+RL G + K+ + EL P SL D R+ Q ++ T +++G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYGYMAP 465
+ IHRDL N+LL + KI DFG+ R +N R+V + + AP
Sbjct: 129 SK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWCAP 183
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E FS SD + FGV + E+ + + L G +Q L ++ KEG+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILH----KIDKEGER----- 233
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPT 557
L + PQ + + + C P RPT
Sbjct: 234 --LPRPEDCPQDIYNVMVQ--CWAHKPEDRPT 261
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 298 NKLGQGGFGTVYKGVL--PNGK--EVAVKRLSRKSW---QGLEEFKNEIILIAKLQHRNL 350
KLG G FG V +G P+GK VAVK L + +++F E+ + L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW--NTCYNIIGGISKGLLYLH 408
+RL G + K+ + EL P SL D R+ Q ++ T +++G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYGYMAP 465
+ IHRDL N+LL + KI DFG+ R +N R+V + + AP
Sbjct: 129 SK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAP 183
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E FS SD + FGV + E+ + + L G +Q L ++ KEG+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILH----KIDKEGER----- 233
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPT 557
L + PQ + + + C P RPT
Sbjct: 234 --LPRPEDCPQDIYNVMVQ--CWAHKPEDRPT 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 298 NKLGQGGFGTVYKGVL--PNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNL 350
KLG G FG V +G P+GK V+V K + +++F E+ + L HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW--NTCYNIIGGISKGLLYLH 408
+RL G + K+ + EL P SL D R+ Q ++ T +++G+ YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYGYMAP 465
+ IHRDL N+LL + KI DFG+ R +N R+V + + AP
Sbjct: 133 SK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAP 187
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E FS SD + FGV + E+ + + L G +Q L ++ KEG+
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILH----KIDKEGER----- 237
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPT 557
L + PQ + + + C P RPT
Sbjct: 238 --LPRPEDCPQDIYNVMVQ--CWAHKPEDRPT 265
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAV-KRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGI 358
LG+G FG K EV V K L R + F E+ ++ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 359 EGEEKLLIYELMPNRSLDCFI--FDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+ + I E + +L I DS Q W+ + I+ G+ YLH + II
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHS---MNII 130
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR------------VVGTYGYMA 464
HRDL N L+ ++ ++DFG+AR+ + + R VVG +MA
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNS 496
PE + K DVFSFG+++ EII G+ N+
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII-GRVNA 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 19/230 (8%)
Query: 299 KLGQGGFGTVYKGVLPNGK---EVAVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+LG G FG+V +GV K +VA+K L + + + EE E ++ +L + +VRL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G + E +L+ E+ L F+ +R ++ + ++ +S G+ YL E +
Sbjct: 77 GV-CQAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY--GYMAPEYAMEGL 472
+HRDL NVLL AKISDFG+++ + + T R G + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRK 189
Query: 473 FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEME 522
FS +SDV+S+GV + E +S + Y ++A++ ++GK ME
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKP--YKKMKGPEVMAFI----EQGKRME 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLV 351
F+ K+G+G FG V+KG+ K VA+K + ++ +E+ + EI ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ G ++ + +I E + S D L+ I+ I KGL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
+ IHRD+K +NVLL + K++DFG+A + Q NT VGT +MAPE +
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQS 179
Query: 472 LFSVKSDVFSFGVIVLEIISGK 493
+ K+D++S G+ +E+ G+
Sbjct: 180 AYDSKADIWSLGITAIELARGE 201
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 298 NKLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++LG+G FG+V Y + N G VAVK+L +F+ EI ++ L +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 353 LVGCGI-EGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
G G + L L+ E +P+ L F+ RL + Y+ I KG+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS--SQICKGMEYL--G 131
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAM 469
SR + +HRDL N+L++ + KI+DFG+A++ ++ R + APE
Sbjct: 132 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 470 EGLFSVKSDVFSFGVIVLEIIS 491
+ +FS +SDV+SFGV++ E+ +
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 45/291 (15%)
Query: 300 LGQGGFGTVYKG------VLPNGKEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + + VAVK L + + E K ILI H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 91
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFI------FDSERRLQLNWNTCYNIIG--- 398
N+V L+G C G ++I E +L ++ F + L ++ T ++I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS--GKRNSGFYLTGHAQTLLAYVWQLWK 516
+MAPE + +++++SDV+SFGV++ EI S G + L K
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL-------K 261
Query: 517 EGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
EG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 262 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 303
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLV 351
F+ K+G+G FG V+KG+ K VA+K + ++ +E+ + EI ++++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ G ++ + +I E + S D L+ I+ I KGL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
+ IHRD+K +NVLL + K++DFG+A + Q NT VGT +MAPE +
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQS 199
Query: 472 LFSVKSDVFSFGVIVLEIISGK 493
+ K+D++S G+ +E+ G+
Sbjct: 200 AYDSKADIWSLGITAIELARGE 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 23/218 (10%)
Query: 287 IKAATDGFSDSNK----LGQGGFGTVY--KGVLPNGKEVAVKRLSR---KSWQGLEEFKN 337
++ +T FSD K LG+G FG V K + G+E AVK +S+ K E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 75
Query: 338 EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
E+ L+ +L H N+ +L + L+ E+ L I +R +++ II
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 132
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTR 454
+ G+ Y H++ KI+HRDLKP N+LL+ KD +I DFG++ F ++K +
Sbjct: 133 RQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK- 188
Query: 455 RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+GT Y+APE + G + K DV+S GVI+ ++SG
Sbjct: 189 --IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 19/230 (8%)
Query: 299 KLGQGGFGTVYKGVLPNGK---EVAVKRLSRKSWQG-LEEFKNEIILIAKLQHRNLVRLV 354
+LG G FG+V +GV K +VA+K L + + + EE E ++ +L + +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G + E +L+ E+ L F+ +R ++ + ++ +S G+ YL E +
Sbjct: 403 GV-CQAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY--GYMAPEYAMEGL 472
+HR+L NVLL AKISDFG+++ + + T R G + + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRK 515
Query: 473 FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEME 522
FS +SDV+S+GV + E +S + Y ++A++ ++GK ME
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKP--YKKMKGPEVMAFI----EQGKRME 559
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 300 LGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQGL------EEFKNEIILIAKL-QHRNLV 351
LG G FG V + GKE AV +++ K + E +E+ +++ L QH N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFI-------FDSERRLQLNWNTCYNIIGGISKGL 404
L+G G L+I E L F+ D E L + +++G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYG 461
+L + IHRD+ NVLL VAKI DFG+AR + N R V
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---K 219
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLL-AYVWQLWKEGKE 520
+MAPE + +++V+SDV+S+G+++ EI S L + L+ + ++L K+G +
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSKFYKLVKDGYQ 273
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
M + + P+ + I C +P RPT + + L ++
Sbjct: 274 M-------AQPAFAPKNIYSIMQA--CWALEPTHRPTFQQICSFLQEQA 313
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 298 NKLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++LG+G FG+V Y + N G VAVK+L +F+ EI ++ L +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 353 LVGCGI-EGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
G G + L L+ E +P+ L F+ RL + Y+ I KG+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS--SQICKGMEYL--G 132
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAM 469
SR + +HRDL N+L++ + KI+DFG+A++ ++ R + APE
Sbjct: 133 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 470 EGLFSVKSDVFSFGVIVLEIIS 491
+ +FS +SDV+SFGV++ E+ +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 298 NKLGQGGFGTV----YKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++LG+G FG+V Y + N G VAVK+L +F+ EI ++ L +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 353 LVGCGI-EGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
G G + L L+ E +P+ L F+ RL + Y+ I KG+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS--SQICKGMEYL--G 144
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV-VGTYGYMAPEYAM 469
SR + +HRDL N+L++ + KI+DFG+A++ ++ R + APE
Sbjct: 145 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 470 EGLFSVKSDVFSFGVIVLEIIS 491
+ +FS +SDV+SFGV++ E+ +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLPNGKE-VAVKRLSRKSWQGLEEFKN-----EII 340
+K+ + + LG+G F TVYK N + VA+K++ ++ N EI
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
L+ +L H N++ L+ L+++ M L+ I D+ L + Y ++
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM--T 121
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+GL YLH+ I+HRDLKP+N+LLD++ V K++DFG+A+ F + A +VV T
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYXHQVV-TR 176
Query: 461 GYMAPEYAMEG-LFSVKSDVFSFGVIVLEII 490
Y APE ++ V D+++ G I+ E++
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 299 KLGQGGFGTVY---KGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVG 355
KLG G +G V V + + + R + S + E+ ++ L H N+++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSE-RRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
+ L+ E L FD R++ N II + G+ YLH+ +
Sbjct: 104 FFEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN--- 156
Query: 415 IIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
I+HRDLKP N+LL +KD + KI DFG++ +F ENQK R +GT Y+APE +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKER--LGTAYYIAPE-VLRK 212
Query: 472 LFSVKSDVFSFGVIVLEIISG 492
+ K DV+S GVI+ +++G
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 300 LGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQGL------EEFKNEIILIAKL-QHRNLV 351
LG G FG V + GKE AV +++ K + E +E+ +++ L QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFI-------FDSERRLQLNWNTCYNIIGGISKGL 404
L+G G L+I E L F+ D E L + +++G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVGTYG 461
+L + IHRD+ NVLL VAKI DFG+AR + N R V
Sbjct: 174 AFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---K 227
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLL-AYVWQLWKEGKE 520
+MAPE + +++V+SDV+S+G+++ EI S L + L+ + ++L K+G +
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSKFYKLVKDGYQ 281
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
M + + P+ + I C +P RPT + + L ++
Sbjct: 282 M-------AQPAFAPKNIYSIMQA--CWALEPTHRPTFQQICSFLQEQA 321
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFK----NEIILIAK 344
AT + ++G G +GTVYK P+ G VA+K S + G E E+ L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 345 LQ---HRNLVRLVG-CGIEGEEK----LLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
L+ H N+VRL+ C ++ L++E + ++ L ++ D L T ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDL 117
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
+ +GL +LH + I+HRDLKP N+L+ K++DFG+ARI+ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP---V 171
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
V T Y APE ++ ++ D++S G I E+ K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 70 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 181
Query: 468 AM-EGLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 300 LGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+G G V V +E VAVK + +++ E K EI + L H N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS-ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + L E L FD E + + + G++YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+LLD+ KISDFG+A +F N + ++ GT Y+APE F +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 477 S-DVFSFGVIVLEIISGK 493
DV+S G+++ +++G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 174
Query: 468 AM-EGLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFK----NEIILIAK 344
AT + ++G G +GTVYK P+ G VA+K S + G E E+ L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 345 LQ---HRNLVRLVG-CGIEGEEK----LLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
L+ H N+VRL+ C ++ L++E + ++ L ++ D L T ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDL 117
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
+ +GL +LH + I+HRDLKP N+L+ K++DFG+ARI+ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP---V 171
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
V T Y APE ++ ++ D++S G I E+ K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 300 LGQGGFGTVYKG------VLPNGKEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + + VAVK L + + E K ILI H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 91
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR-----------LQLNWNTCYNI 396
N+V L+G C G ++I E +L ++ L L CY+
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 152 --QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWK 516
+MAPE + +++++SDV+SFGV++ EI S G + + +L K
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRL-K 261
Query: 517 EGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
EG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 262 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 303
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 173
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 174
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 173
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 117
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y A
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRA 172
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 70 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 181
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 63 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY N K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H K+IHRD+KP N+LL KI+DFG + +++ A + GT Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGK 493
E + K D++S GV+ E + GK
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF ++ + KEV ++ KS E+ EI + L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL RSL + +RR L + I G YLH R ++
Sbjct: 89 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 142
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSV 475
IHRDLK N+ L++D+ KI DFG+A + + T + GT Y+APE + S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 476 KSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIP 535
+ DV+S G I+ ++ GK F + +T L K+ E+ SIP
Sbjct: 201 EVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRI--------KKNEY---------SIP 241
Query: 536 QVVRCIHIGLL--CVQEDPAVRPTMSNVV 562
+ + + L+ +Q DP RPT++ ++
Sbjct: 242 KHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 67 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 178
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF ++ + KEV ++ KS E+ EI + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL RSL + +RR L + I G YLH R ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 138
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSV 475
IHRDLK N+ L++D+ KI DFG+A + + T + GT Y+APE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 476 KSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIP 535
+ DV+S G I+ ++ GK F + +T L K+ E+ SIP
Sbjct: 197 EVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRI--------KKNEY---------SIP 237
Query: 536 QVVRCIHIGLL--CVQEDPAVRPTMSNVV 562
+ + + L+ +Q DP RPT++ ++
Sbjct: 238 KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF ++ + KEV ++ KS E+ EI + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL RSL + +RR L + I G YLH R ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 138
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSV 475
IHRDLK N+ L++D+ KI DFG+A + + T + GT Y+APE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 476 KSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIP 535
+ DV+S G I+ ++ GK F + +T L K+ E+ SIP
Sbjct: 197 EVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRI--------KKNEY---------SIP 237
Query: 536 QVVRCIHIGLL--CVQEDPAVRPTMSNVV 562
+ + + L+ +Q DP RPT++ ++
Sbjct: 238 KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 174
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 92
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR--------------LQLNWNTC 393
N+V L+G C G ++I E +L ++ L L C
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 394 YNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT 453
Y+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 153 YSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
+MAPE + +++++SDV+SFGV++ EI S G + + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRR 263
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 264 L-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF ++ + KEV ++ KS E+ EI + L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL RSL + +RR L + I G YLH R ++
Sbjct: 107 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 160
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVV-GTYGYMAPEYAMEGLFS 474
IHRDLK N+ L++D+ KI DFG+A + + ++V+ GT Y+APE + S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 475 VKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
+ DV+S G I+ ++ GK F + +T L K+ E+ SI
Sbjct: 218 FEVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRI--------KKNEY---------SI 258
Query: 535 PQVVRCIHIGLL--CVQEDPAVRPTMSNVV 562
P+ + + L+ +Q DP RPT++ ++
Sbjct: 259 PKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 11/202 (5%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLV 351
F+ K+G+G FG V+KG+ K VA+K + ++ +E+ + EI ++++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ G ++ + +I E + S D L+ I+ I KGL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
+ IHRD+K +NVLL + K++DFG+A + Q N VGT +MAPE +
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQS 194
Query: 472 LFSVKSDVFSFGVIVLEIISGK 493
+ K+D++S G+ +E+ G+
Sbjct: 195 AYDSKADIWSLGITAIELARGE 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 42/292 (14%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGL------EEFKNEIILIAKL-QHRNLV 351
LG G FG V + GKE AV +++ K + E +E+ +++ L QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
L+G G L+I E L F+ R L+ + + I + LH S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD--PAFAIANSTASTRDLLHFSS 171
Query: 412 RL----------KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVVG 458
++ IHRD+ NVLL VAKI DFG+AR + N R V
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV- 230
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLL-AYVWQLWKE 517
+MAPE + +++V+SDV+S+G+++ EI S L + L+ + ++L K+
Sbjct: 231 --KWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSKFYKLVKD 282
Query: 518 GKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
G +M + + P+ + I C +P RPT + + L ++
Sbjct: 283 GYQM-------AQPAFAPKNIYSIMQA--CWALEPTHRPTFQQICSFLQEQA 325
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 174
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 44/293 (15%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGL------EEFKNEIILIAKL-QHRNLV 351
LG G FG V + GKE AV +++ K + E +E+ +++ L QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ-----------LNWNTCYNIIGGI 400
L+G G L+I E L F+ R L+ L+ + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TANTRRVV 457
++G+ +L + IHRD+ NVLL VAKI DFG+AR + N R V
Sbjct: 174 AQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 458 GTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLL-AYVWQLWK 516
+MAPE + +++V+SDV+S+G+++ EI S L + L+ + ++L K
Sbjct: 231 ---KWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSKFYKLVK 281
Query: 517 EGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
+G +M + + P+ + I C +P RPT + + L ++
Sbjct: 282 DGYQM-------AQPAFAPKNIYSIMQA--CWALEPTHRPTFQQICSFLQEQA 325
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 173
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF ++ + KEV ++ KS E+ EI + L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL RSL + +RR L + I G YLH R ++
Sbjct: 109 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 162
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVV-GTYGYMAPEYAMEGLFS 474
IHRDLK N+ L++D+ KI DFG+A + + ++V+ GT Y+APE + S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 475 VKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
+ DV+S G I+ ++ GK F + +T L K+ E+ SI
Sbjct: 220 FEVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRI--------KKNEY---------SI 260
Query: 535 PQVVRCIHIGLL--CVQEDPAVRPTMSNVV 562
P+ + + L+ +Q DP RPT++ ++
Sbjct: 261 PKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 11/202 (5%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLS-RKSWQGLEEFKNEIILIAKLQHRNLV 351
F+ K+G+G FG V+KG+ K VA+K + ++ +E+ + EI ++++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ G ++ + +I E + S D L+ I+ I KGL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
+ IHRD+K +NVLL + K++DFG+A + Q N VGT +MAPE +
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQS 179
Query: 472 LFSVKSDVFSFGVIVLEIISGK 493
+ K+D++S G+ +E+ G+
Sbjct: 180 AYDSKADIWSLGITAIELARGE 201
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 39/221 (17%)
Query: 300 LGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQ-GLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG+GGFG V++ + A+KR+ + + E+ E+ +AKL+H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 358 IE---------GEEKLLIY---ELMPNRSLD------CFIFDSERRLQLNWNTCYNIIGG 399
+E K+ +Y +L +L C I + ER + C +I
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER------SVCLHIFLQ 126
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT--------A 451
I++ + +LH ++HRDLKPSN+ D V K+ DFG+ ++++ A
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 452 NTRRV--VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
R VGT YM+PE +S K D+FS G+I+ E++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 62 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 118
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 49/295 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 91
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 152 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+MAPE + +++++SDV+SFGV++ EI S G + +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR 262
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
+L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 263 RL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 62 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 118
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLV----G 355
+G+G +G VYKG L + + VAVK S + Q KN I + ++H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDER 78
Query: 356 CGIEGE-EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH------ 408
+G E LL+ E PN SL ++ +W + + +++GL YLH
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMA------RIFCENQKTANTRRVVGTYGY 462
+ + I HRDL NVL+ D ISDFG++ R+ ++ VGT Y
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 463 MAPEYAMEGLFSVKS--------DVFSFGVIVLEII 490
MAPE +EG +++ D+++ G+I EI
Sbjct: 195 MAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 64 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 120
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 175
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 63 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 62 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 118
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQ 346
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 347 HRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 466 EYAME-GLFSVKSDVFSFGVIVLEIISGK 493
E + +S D++S G I E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF ++ + KEV ++ KS E+ EI + L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ EL RSL + +RR L + I G YLH R ++
Sbjct: 83 FFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRV 136
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVV-GTYGYMAPEYAMEGLFS 474
IHRDLK N+ L++D+ KI DFG+A + + ++V+ GT Y+APE + S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 475 VKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
+ DV+S G I+ ++ GK F + +T L K+ E+ SI
Sbjct: 194 FEVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRI--------KKNEY---------SI 234
Query: 535 PQVVRCIHIGLL--CVQEDPAVRPTMSNVV 562
P+ + + L+ +Q DP RPT++ ++
Sbjct: 235 PKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 117
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 172
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQ 346
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 347 HRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 466 EYAME-GLFSVKSDVFSFGVIVLEIISGK 493
E + +S D++S G I E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 63 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 NHPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 117
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 172
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQ 346
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 347 HRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 466 EYAME-GLFSVKSDVFSFGVIVLEIISGK 493
E + +S D++S G I E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQ 346
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 347 HRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKDFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 466 EYAME-GLFSVKSDVFSFGVIVLEIISGK 493
E + +S D++S G I E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 49/295 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 82
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 143 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+MAPE + +++++SDV+SFGV++ EI S G + +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR 253
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
+L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 254 RL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 49/295 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 91
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 152 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+MAPE + +++++SDV+SFGV++ EI S G + +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR 262
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
+L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 263 RL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEF-----KNEIILIA 343
AT + ++G G +GTVYK P+ G VA+K + + G E+ L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 344 KLQ---HRNLVRLVG-CGIEGEEK----LLIYELMPNRSLDCFIFDSERRLQLNWNTCYN 395
+L+ H N+VRL+ C ++ L++E + ++ L ++ D L T +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 396 IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR 455
++ +GL +LH + I+HRDLKP N+L+ K++DFG+ARI+
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP--- 178
Query: 456 VVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
VV T Y APE ++ ++ D++S G I E+ K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 49/295 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 82
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 143 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+MAPE + +++++SDV+SFGV++ EI S G + +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR 253
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
+L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 254 RL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQ 346
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 347 HRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 466 EYAME-GLFSVKSDVFSFGVIVLEIISGK 493
E + +S D++S G I E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 64 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 175
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIF-DSERRLQLNWNTCYNIIGGISKG 403
H N+V+L+ I E KL L++E + S+D F D+ + + + + +G
Sbjct: 63 NHPNIVKLLDV-IHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L + H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y
Sbjct: 119 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 464 APEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
APE + +S D++S G I E+++ +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIF-DSERRLQLNWNTCYNIIGGISKG 403
H N+V+L+ I E KL L++E + S+D F D+ + + + + +G
Sbjct: 63 NHPNIVKLLDV-IHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L + H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 464 APEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
APE + +S D++S G I E+++ +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 49/295 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 93
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 154 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+MAPE + +++++SDV+SFGV++ EI S G + +
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR 264
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
+L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 265 RL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 309
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIF-DSERRLQLNWNTCYNIIGGISKG 403
H N+V+L+ I E KL L++E + S+D F D+ + + + + +G
Sbjct: 61 NHPNIVKLLDV-IHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L + H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y
Sbjct: 117 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 171
Query: 464 APEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
APE + +S D++S G I E+++ +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIF-DSERRLQLNWNTCYNIIGGISKG 403
H N+V+L+ I E KL L++E + S+D F D+ + + + + +G
Sbjct: 62 NHPNIVKLLDV-IHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L + H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 464 APEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
APE + +S D++S G I E+++ +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 127/297 (42%), Gaps = 53/297 (17%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 91
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 152 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS--GKRNSGFYLTGHAQTLLAY 510
+MAPE + +++++SDV+SFGV++ EI S G + L
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-- 264
Query: 511 VWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 265 -----KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 54/299 (18%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGL------EEFKNEIILIAKL-QHRNLV 351
LG G FG V + GKE AV +++ K + E +E+ +++ L QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR-----LQLNWNTCYN----------- 395
L+G G L+I E L F+ RR L+ ++N +N
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL----RRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 396 -IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK---TA 451
+++G+ +L + IHRD+ NVLL VAKI DFG+AR +
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLL-AY 510
N R V +MAPE + +++V+SDV+S+G+++ EI S L + L+ +
Sbjct: 227 NARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGILVNSK 277
Query: 511 VWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGSES 569
++L K+G +M + + P+ + I C +P RPT + + L ++
Sbjct: 278 FYKLVKDGYQM-------AQPAFAPKNIYSIMQA--CWALEPTHRPTFQQICSFLQEQA 327
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYK------GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAK 344
+D + +LG+G F V + G+ K + K+LS + +Q LE E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRK 61
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
LQH N+VRL E L+++L+ L I E + + + C I I + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESI 118
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
Y H + I+HR+LKP N+LL K K++DFG+A E + GT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 172
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + +S D+++ GVI+ ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 225
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 226 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 127/297 (42%), Gaps = 53/297 (17%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 82
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 143 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS--GKRNSGFYLTGHAQTLLAY 510
+MAPE + +++++SDV+SFGV++ EI S G + L
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-- 255
Query: 511 VWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 256 -----KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 49/295 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 82
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 143 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+MAPE + +++++SDV+SFGV++ EI S G + +
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR 253
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
+L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 254 RL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 298
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 49/295 (16%)
Query: 300 LGQGGFGTVYK----GVLPNG--KEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + G+ + VAVK L + + E K ILI H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 128
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR---------------LQLNWNT 392
N+V L+G C G ++I E +L ++ L L
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN 452
CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 189 CYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVW 512
+MAPE + +++++SDV+SFGV++ EI S G + +
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCR 299
Query: 513 QLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
+L KEG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 300 RL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 344
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYK------GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAK 344
+D + +LG+G F V + G+ K + K+LS + +Q LE E + K
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRK 60
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
LQH N+VRL E L+++L+ L I E + + + C I I + +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESI 117
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
Y H + I+HR+LKP N+LL K K++DFG+A E + GT G
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 171
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + +S D+++ GVI+ ++ G
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 201
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 251
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 252 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 281
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+ RL ++ EI L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 63 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 174
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKLQHR 348
+ F K+G+G +G VYK G+ VA+ RL ++ EI L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 349 NLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL +
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H +++HRDLKP N+L++ + K++DFG+AR F +T T VV T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV-TLWYRAPEI 173
Query: 468 AME-GLFSVKSDVFSFGVIVLEIISGK 493
+ +S D++S G I E+++ +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 174
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 224
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 225 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 178
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 228
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 229 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 192
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 242
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 243 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 272
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 180
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 230
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 231 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYK------GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAK 344
+D + +LG+G F V + G+ K + K+LS + +Q LE E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRK 61
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
LQH N+VRL E L+++L+ L I E + + + C I I + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESI 118
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
Y H + I+HR+LKP N+LL K K++DFG+A E + GT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 172
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + +S D+++ GVI+ ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----ELCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 225
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 226 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++ A + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 225
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 226 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 298 NKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLE---EFKNEIILIAKLQHRNLVRL 353
+ LG G FG V G G +VAVK L+R+ + L+ + + EI + +H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
+ ++ E + L +I + R L+ + I G+ Y H R
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCH---RH 135
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
++HRDLKP NVLLD M AKI+DFG++ + + + R G+ Y APE L+
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGRLY 192
Query: 474 S-VKSDVFSFGVIVLEIISG 492
+ + D++S GVI+ ++ G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++ A + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDYLPP 178
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 228
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 229 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + C + T + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRT-TLSGTLDYLPP 176
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 226
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 227 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 256
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 300 LGQGGFGTVYKG------VLPNGKEVAVKRLSRKSWQG-----LEEFKNEIILIAKLQHR 348
LG+G FG V + + VAVK L + + E K ILI H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---ILIHIGHHL 93
Query: 349 NLVRLVG-CGIEGEEKLLIYELMPNRSLDCFIFDSERR--------LQLNWNTCYNIIG- 398
N+V L+G C G ++I E +L ++ L ++ T ++I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 399 --GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
++KG+ +L + K IHRDL N+LL + V KI DFG+AR ++
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWK 516
+MAPE + +++++SDV+SFGV++ EI S G + + +L K
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRL-K 265
Query: 517 EGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLGS 567
EG M D + P++ + + L C +P+ RPT S +V LG+
Sbjct: 266 EGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 178
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 228
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 229 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 225
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 226 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 225
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 226 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVK--RLSRKSWQGLEEFKNEIILIAKL 345
+ + F K+G+G +G VYK G+ VA+K RL ++ EI L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 346 QHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+V+L+ I E KL L++E + ++ L F+ D+ + + + + +GL
Sbjct: 63 NHPNIVKLLDV-IHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
+ H +++HRDLKP N+L++ + K++DFG+AR F +T V T Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 465 PEYAME-GLFSVKSDVFSFGVIVLEIISGK 493
PE + +S D++S G I E+++ +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKE----VAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRLV 354
LG G F V +L K VA+K +++K+ +G E +NEI ++ K++H N+V L
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNT---CYNIIGGISKGLLYLHEDS 411
G LI +L+ L FD R ++ + T +I + + YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGEL----FD--RIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 412 RLKIIHRDLKPSNVL---LDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
L I+HRDLKP N+L LD+D ISDFG++++ + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ +S D +S GVI ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 179
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 229
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 230 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTX----LCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 225
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 226 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPP 176
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 226
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 227 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 256
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR---LQLNWNTCYNIIGGIS----- 401
++ L+G + +I E +L ++ RR L+ ++N +N +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 402 -------KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKTA 451
+G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLLA 509
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 211 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVE 259
Query: 510 YVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 260 ELFKLLKEGHRMD 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGTLDYLPP 180
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 230
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 231 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYK------GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAK 344
+D + +LG+G F V + G+ K + K+LS + +Q LE E + K
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 84
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
LQH N+VRL E L+++L+ L I E + + + C I I + +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESI 141
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
Y H + I+HR+LKP N+LL K K++DFG+A E + GT G
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPG 195
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + +S D+++ GVI+ ++ G
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 16/212 (7%)
Query: 288 KAATDGFSDSNKLGQGGFGTVY---KGVLPN-GKEVAVKRLSRKSWQGLEEF--KNEIIL 341
KA F LGQG FG V+ K P+ G A+K L + + + + K E +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 342 IAKLQHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
+A + H +V+L + E KL LI + + R D F S+ + + + + +
Sbjct: 84 LADVNHPFVVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKF-YLAEL 139
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+ GL +LH L II+RDLKP N+LLD++ K++DFG+++ +++K A + GT
Sbjct: 140 ALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTV 194
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
YMAPE S +D +S+GV++ E+++G
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + + ++ + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 177
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 227
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 228 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 172
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 222
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 223 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 252
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLPP 180
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E K D++S GV+ E + GK F + +T +K +EF
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 230
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 231 PDFVTEGARDLISRLL-------KHNPSQRPXLREVL 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + + ++ + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 178
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 228
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 229 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + + ++ + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 175
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 225
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 226 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 300 LGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G G V + VL G VAVK+LSR ++ + E++L+ + H+N++ L+
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 355 GCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
E ++ L+ ELM + +L C + E + Y ++ GI +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANL-CQVIHMELDHERMSYLLYQMLCGIK----HLH 143
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
IIHRDLKPSN+++ D KI DFG+AR C N T VV Y Y APE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRY-YRAPEVI 197
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ ++ D++S G I+ E++ G
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + + ++ + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPP 176
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 226
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 227 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 33/278 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKGL 404
+H N++RL G + LI E P ++ ++L + + I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANAL 126
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
Y H ++IHRD+KP N+LL KI+DFG + +++T + GT Y+
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYLP 179
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFT 229
Query: 525 DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 230 FPDFVTEGARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGK----EVAVKRLSRK--SWQGLEEFKNEIILIAKLQH 347
F+ LG+G FG+V + L +VAVK L + +EEF E + + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 348 RNLVRLVGCGIEGEEK------LLIYELMPNRSLDCFIFDS---ERRLQLNWNTCYNIIG 398
++ +LVG + K ++I M + L F+ S E L T +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
I+ G+ YL S IHRDL N +L +DM ++DFG++R
Sbjct: 145 DIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
++A E + L++V SDV++FGV + EI++
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR---LQLNWNTCYNIIGGIS----- 401
++ L+G + +I E +L ++ RR L+ ++N +N +S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 402 -------KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKTA 451
+G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLLA 509
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 203 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVE 251
Query: 510 YVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 252 ELFKLLKEGHRMD 264
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 42/251 (16%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR-LQLNWNTCYNIIGGIS------- 401
++ L+G + +I E +L ++ E L+ ++N +N +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 402 -----KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKTANT 453
+G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT N
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLLAYV 511
R V +MAPE + +++ +SDV+SFGV++ EI F L G + + +
Sbjct: 213 RLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVEEL 261
Query: 512 WQLWKEGKEME 522
++L KEG M+
Sbjct: 262 FKLLKEGHRMD 272
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR---LQLNWNTCYNIIGGIS----- 401
++ L+G + +I E +L ++ RR L+ ++N +N +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 402 -------KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKTA 451
+G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLLA 509
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 211 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVE 259
Query: 510 YVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 260 ELFKLLKEGHRMD 272
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR---LQLNWNTCYNIIGGIS----- 401
++ L+G + +I E +L ++ RR L+ ++N +N +S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 402 -------KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKTA 451
+G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLLA 509
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 200 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVE 248
Query: 510 YVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 249 ELFKLLKEGHRMD 261
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR---LQLNWNTCYNIIGGIS----- 401
++ L+G + +I E +L ++ RR L+ ++N +N +S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 402 -------KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKTA 451
+G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLLA 509
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 204 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVE 252
Query: 510 YVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 253 ELFKLLKEGHRMD 265
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 112/224 (50%), Gaps = 39/224 (17%)
Query: 300 LGQGGFGTVYK----GVLPNGK--EVAVKRLSRKSWQGLEE-FKNEIILIAKL-QHRNLV 351
LG G FG V G+ G +VAVK L K+ E +E+ ++ +L H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 352 RLVG-CGIEGEEKLLIYE----------LMPNR---SLDCFIFDSERRLQ----LNWNTC 393
L+G C + G LI+E L R S D +++++RL+ LN T
Sbjct: 113 NLLGACTLSGP-IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 394 YNII---GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK- 449
+++ ++KG+ +L S +HRDL NVL+ V KI DFG+AR +
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 450 --TANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
N R V +MAPE EG++++KSDV+S+G+++ EI S
Sbjct: 229 VVRGNARLPVK---WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERR---LQLNWNTCYNIIGGIS----- 401
++ L+G + +I E +L ++ RR L+ ++N +N +S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 402 -------KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKTA 451
+G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLLA 509
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 252 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVE 300
Query: 510 YVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 301 ELFKLLKEGHRMD 313
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEII---LIAKLQH 347
D F D LG+GGFG V+ + GK A K+L++K + + ++ ++ ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFD-SERRLQLNWNTCYNIIGGISKGLLY 406
R +V L + L+ +M + I++ E I GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH+ + II+RDLKP NVLLD D +ISD G+A Q T+ GT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPE 359
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGK 493
+ + D F+ GV + E+I+ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKE----VAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRLV 354
LG G F V +L K VA+K +++++ +G E +NEI ++ K++H N+V L
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNT---CYNIIGGISKGLLYLHEDS 411
G LI +L+ L FD R ++ + T +I + + YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGEL----FD--RIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 412 RLKIIHRDLKPSNVL---LDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
L I+HRDLKP N+L LD+D ISDFG++++ + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ +S D +S GVI ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
F + +G GGFG V+K +GK +KR+ + E+ + E+ +AKL H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVH 68
Query: 353 LVGC--GIEGEEK--------------LLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
GC G + + + + E +L+ +I + R +L+ +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALEL 127
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I+KG+ Y+H K+I+RDLKPSN+ L KI DFG+ + K ++
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-- 182
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
GT YM+PE + + D+++ G+I+ E++
Sbjct: 183 -GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 35/279 (12%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR--VVGTYGYM 463
Y H ++IHRD+KP N+LL KI+DFG + ++RR + GT Y+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDDLCGTLDYL 199
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEF 523
PE + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEF 249
Query: 524 VDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 250 TFPDFVTEGARDLISRLL-------KHNPSQRPMLREVL 281
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI++FG + +++T + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYLPP 177
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 227
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 228 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 257
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEII---LIAKLQH 347
D F D LG+GGFG V+ + GK A K+L++K + + ++ ++ ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFD-SERRLQLNWNTCYNIIGGISKGLLY 406
R +V L + L+ +M + I++ E I GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH+ + II+RDLKP NVLLD D +ISD G+A Q T+ GT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPE 359
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGK 493
+ + D F+ GV + E+I+ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 283 HLAVI-KAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW--------QGL 332
H++V KA D + S LG G G V K+VA+K +S++ +
Sbjct: 6 HMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPA 65
Query: 333 EEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNT 392
+ EI ++ KL H ++++ + E+ ++ ELM L + ++R L T
Sbjct: 66 LNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR---LKEAT 121
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQK 449
C + + YLHE+ IIHRDLKP NVLL ++D + KI+DFG ++I E
Sbjct: 122 CKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--- 175
Query: 450 TANTRRVVGTYGYMAPEYAME---GLFSVKSDVFSFGVIVLEIISG 492
T+ R + GT Y+APE + ++ D +S GVI+ +SG
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 133/304 (43%), Gaps = 57/304 (18%)
Query: 300 LGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQGL------EEFKNEIILIAKL-QHRNLV 351
LG G FG V + GKE AV +++ K + E +E+ +++ L QH N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 352 RLVGCGIEGEEKLLIYE----------------------LMPNRSLDCFIFDSERRLQLN 389
L+G G L+I E L P + + + R L+L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 390 WNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK 449
+ +++G+ +L + IHRD+ NVLL VAKI DFG+AR +
Sbjct: 159 --DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 450 ---TANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQT 506
N R V +MAPE + +++V+SDV+S+G+++ EI S L +
Sbjct: 214 YIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFS------LGLNPYPGI 264
Query: 507 LL-AYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
L+ + ++L K+G +M + + P+ + I C +P RPT + + L
Sbjct: 265 LVNSKFYKLVKDGYQM-------AQPAFAPKNIYSIMQA--CWALEPTHRPTFQQICSFL 315
Query: 566 GSES 569
++
Sbjct: 316 QEQA 319
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEII---LIAKLQH 347
D F D LG+GGFG V+ + GK A K+L++K + + ++ ++ ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFD-SERRLQLNWNTCYNIIGGISKGLLY 406
R +V L + L+ +M + I++ E I GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH+ + II+RDLKP NVLLD D +ISD G+A Q T+ GT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPE 359
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGK 493
+ + D F+ GV + E+I+ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKE----VAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRLV 354
LG G F V +L K VA+K +++++ +G E +NEI ++ K++H N+V L
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNT---CYNIIGGISKGLLYLHEDS 411
G LI +L+ L FD R ++ + T +I + + YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGEL----FD--RIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 412 RLKIIHRDLKPSNVL---LDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
L I+HRDLKP N+L LD+D ISDFG++++ + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ +S D +S GVI ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIA 343
K + F LG G FG V+ NG+ A+K L ++ + +E +E ++++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG-ISK 402
+ H ++R+ G + ++ +I + + L F R+ Q N +
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCL 117
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
L YLH II+RDLKP N+LLDK+ KI+DFG A+ + T + GT Y
Sbjct: 118 ALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDY 169
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+APE ++ D +SFG+++ E+++G
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI+DFG + + ++ + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPP 178
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 228
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 229 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEII---LIAKLQH 347
D F D LG+GGFG V+ + GK A K+L++K + + ++ ++ ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFD-SERRLQLNWNTCYNIIGGISKGLLY 406
R +V L + L+ +M + I++ E I GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH+ + II+RDLKP NVLLD D +ISD G+A Q T+ GT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPE 359
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGK 493
+ + D F+ GV + E+I+ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 31/230 (13%)
Query: 300 LGQGGFGTVYKGVLPNGK----EVAVK--RLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG+V +G L +VAVK +L S + +EEF +E + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 354 VGCGIEGEEK-----LLIYELMPNRSLDCFIFDSERRLQ-----LNWNTCYNIIGGISKG 403
+G IE + ++I M L ++ S RL+ + T + I+ G
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS--RLETGPKHIPLQTLLKFMVDIALG 159
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
+ YL S +HRDL N +L DM ++DFG+++ R ++
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIIS-------GKRNSGFY---LTGH 503
A E + +++ KSDV++FGV + EI + G +N Y L GH
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLS-RKSWQGLEEFK-NEIILIAKLQHRNLVRLVGC 356
K+G+G +G VYK G+ A+K++ K +G+ EI ++ +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+ +L++E + ++ L + E L+ T + + + G+ Y H+ +++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHDR---RVL 122
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM-EGLFSV 475
HRDLKP N+L++++ KI+DFG+AR F + T VV T Y AP+ M +S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEVV-TLWYRAPDVLMGSKKYST 180
Query: 476 KSDVFSFGVIVLEIISG 492
D++S G I E+++G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLS-RKSWQGLEEFK-NEIILIAKLQHRNLVRLVGC 356
K+G+G +G VYK G+ A+K++ K +G+ EI ++ +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+ +L++E + ++ L + E L+ T + + + G+ Y H+ +++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHDR---RVL 122
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM-EGLFSV 475
HRDLKP N+L++++ KI+DFG+AR F + T VV T Y AP+ M +S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEVV-TLWYRAPDVLMGSKKYST 180
Query: 476 KSDVFSFGVIVLEIISG 492
D++S G I E+++G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 300 LGQGGFGTVYKGVLPNGKE----VAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRLV 354
LG G F V +L K VA+K +++++ +G E +NEI ++ K++H N+V L
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNT---CYNIIGGISKGLLYLHEDS 411
G LI +L+ L FD R ++ + T +I + + YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGEL----FD--RIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 412 RLKIIHRDLKPSNVL---LDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
L I+HRDLKP N+L LD+D ISDFG++++ + GT GY+APE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ +S D +S GVI ++ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
+H N++RL G + LI E P L + ++ + + I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
Y H ++IHRD+KP N+LL KI++FG + +++T + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYLPP 178
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVD 525
E + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTF 228
Query: 526 PLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 229 PDFVTEGARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+G+G +G V++G G+ VAVK S KSW E N ++L +H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 99
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH-----EDS 411
+ L+ + ++D + L+ +C I+ I+ GL +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE--NQKTANTRRVVGTYGYMAPEYAM 469
+ I HRDLK N+L+ K+ I+D G+A + + NQ VGT YMAPE
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 219
Query: 470 EGL----FSV--KSDVFSFGVIVLEI 489
E + F + D+++FG+++ E+
Sbjct: 220 ETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW--------QGLEEFKNE 338
KA D + S LG G G V K+VA+K +S++ + + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 339 IILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
I ++ KL H ++++ + E+ ++ ELM L + ++R L TC
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFY 121
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRR 455
+ + YLHE+ IIHRDLKP NVLL ++D + KI+DFG ++I E T+ R
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRT 175
Query: 456 VVGTYGYMAPEYAME---GLFSVKSDVFSFGVIVLEIISG 492
+ GT Y+APE + ++ D +S GVI+ +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW--------QGLEEFKNE 338
KA D + S LG G G V K+VA+K +S++ + + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 339 IILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
I ++ KL H ++++ + E+ ++ ELM L + ++R L TC
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFY 121
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRR 455
+ + YLHE+ IIHRDLKP NVLL ++D + KI+DFG ++I E T+ R
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRT 175
Query: 456 VVGTYGYMAPEYAME---GLFSVKSDVFSFGVIVLEIISG 492
+ GT Y+APE + ++ D +S GVI+ +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 46/290 (15%)
Query: 300 LGQGGFGTVYKGVLPNGK------EVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG+G FG V K + K VAVK L S L + +E ++ ++ H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSER---------------------RLQLNWN 391
L G + LLI E SL F+ +S + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 392 TCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTA 451
+ IS+G+ YL E +K++HRDL N+L+ + KISDFG++R E
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYV 511
+ +MA E + +++ +SDV+SFGV++ EI++ N + +
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP------YPGIPPERL 261
Query: 512 WQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNV 561
+ L K G ME D + ++ R + L C +++P RP +++
Sbjct: 262 FNLLKTGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 33/278 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKL 345
A + F LG+G FG VY K + A+K L + + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKGL 404
+H N++RL G + LI E P ++ ++L + + I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANAL 126
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
Y H ++IHRD+KP N+LL KI+DFG + + ++ + GT Y+
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLP 179
Query: 465 PEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFV 524
PE + K D++S GV+ E + GK F + +T +K +EF
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFT 229
Query: 525 DPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVV 562
P + + + R + + +P+ RP + V+
Sbjct: 230 FPDFVTEGARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW--------QGLEEFKNE 338
KA D + S LG G G V K+VA+K +S++ + + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 339 IILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
I ++ KL H ++++ + E+ ++ ELM L + ++R L TC
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFY 121
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRR 455
+ + YLHE+ IIHRDLKP NVLL ++D + KI+DFG ++I E T+ R
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRT 175
Query: 456 VVGTYGYMAPEYAME---GLFSVKSDVFSFGVIVLEIISG 492
+ GT Y+APE + ++ D +S GVI+ +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLS-RKSWQGLEEFK-NEIILIAKLQHRNLVRLVGC 356
K+G+G +G VYK G+ A+K++ K +G+ EI ++ +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+ +L++E + ++ L + E L+ T + + + G+ Y H+ +++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHDR---RVL 122
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM-EGLFSV 475
HRDLKP N+L++++ KI+DFG+AR F + T +V T Y AP+ M +S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEIV-TLWYRAPDVLMGSKKYST 180
Query: 476 KSDVFSFGVIVLEIISG 492
D++S G I E+++G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 298 NKLGQGGFGTVYKGVL----PNGKEVAVKRL--SRKSWQGLEEFKNEIILIAKLQHRNLV 351
K+G+G FG K +L +G++ +K + SR S + EE + E+ ++A ++H N+V
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ E ++ + L I ++++ + + + I L ++H+
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVHDR- 144
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
KI+HRD+K N+ L KD ++ DFG+AR+ N R +GT Y++PE
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENK 200
Query: 472 LFSVKSDVFSFGVIVLEIISGK 493
++ KSD+++ G ++ E+ + K
Sbjct: 201 PYNNKSDIWALGCVLYELCTLK 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 31/208 (14%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRNLVRLVG 355
+G G +G+V + +G ++AVK+LSR +Q + K E+ L+ ++H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 117
Query: 356 CGI------EGEEKLLIYELMP---NRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLY 406
E + L+ LM N + C +L + +I I +GL Y
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKC--------QKLTDDHVQFLIYQILRGLKY 169
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
+H IIHRDLKPSN+ +++D KI DFG+AR +++ T V T Y APE
Sbjct: 170 IHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWYRAPE 221
Query: 467 YAMEGL-FSVKSDVFSFGVIVLEIISGK 493
+ + +++ D++S G I+ E+++G+
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 48/254 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG---------- 399
++ L+G + +I E +L ++ + R CYN
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 400 ------ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKT 450
+++G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 451 ANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLL 508
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 195 TNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPV 243
Query: 509 AYVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 244 EELFKLLKEGHRMD 257
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+G+G +G V++G G+ VAVK S KSW E N ++L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH-----EDS 411
+ L+ + ++D + L+ +C I+ I+ GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE--NQKTANTRRVVGTYGYMAPEYAM 469
+ I HRDLK N+L+ K+ I+D G+A + + NQ VGT YMAPE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 470 EGL----FSV--KSDVFSFGVIVLEI 489
E + F + D+++FG+++ E+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW--------QGLEEFKNE 338
KA D + S LG G G V K+VA+K +S++ + + E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 339 IILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
I ++ KL H ++++ + E+ ++ ELM L + ++R L TC
Sbjct: 65 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFY 120
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRR 455
+ + YLHE+ IIHRDLKP NVLL ++D + KI+DFG ++I E T+ R
Sbjct: 121 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRT 174
Query: 456 VVGTYGYMAPEYAME---GLFSVKSDVFSFGVIVLEIISG 492
+ GT Y+APE + ++ D +S GVI+ +SG
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKL-QHRNLVRLVGCGI 358
+G G +G VYKG ++A ++ + EE K EI ++ K HRN+ G I
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 359 E------GEEKLLIYELMPNRSLDCFIFDSE-RRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ ++ L+ E S+ I +++ L+ W Y I I +GL +LH+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-IAY-ICREILRGLSHLHQH- 148
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM-- 469
K+IHRD+K NVLL ++ K+ DFG++ NT +GT +MAPE
Sbjct: 149 --KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPYWMAPEVIACD 204
Query: 470 ---EGLFSVKSDVFSFGVIVLEIISG 492
+ + KSD++S G+ +E+ G
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+G+G +G V++G G+ VAVK S KSW E N ++L +H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH-----EDS 411
+ L+ + ++D + L+ +C I+ I+ GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE--NQKTANTRRVVGTYGYMAPEYAM 469
+ I HRDLK N+L+ K+ I+D G+A + + NQ VGT YMAPE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 470 EGL----FSV--KSDVFSFGVIVLEI 489
E + F + D+++FG+++ E+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 299 KLGQGGFGTVYKGVLPNGK-EVAVKRLSRKSWQG-------------LEEFKNEIILIAK 344
KLG G +G V NG E A+K + + + EE NEI L+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
L H N+++L + + L+ E L I + R + + NI+ I G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGI 159
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKD---MVAKISDFGMARIFCENQKTANTRRVVGTYG 461
YLH+ + I+HRD+KP N+LL+ + KI DFG++ F ++ K R +GT
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTAY 213
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE ++ ++ K DV+S GVI+ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 48/254 (18%)
Query: 300 LGQGGFGTVYKGVL-------PNG-KEVAVKRL-SRKSWQGLEEFKNEIILIAKL-QHRN 349
LG+G FG V PN +VAVK L S + + L + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGG---------- 399
++ L+G + +I E +L ++ + R CYN
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 400 ------ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE---NQKT 450
+++G+ YL + K IHRDL NVL+ +D V KI+DFG+AR +KT
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 451 ANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQTLL 508
N R V +MAPE + +++ +SDV+SFGV++ EI F L G + +
Sbjct: 210 TNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPV 258
Query: 509 AYVWQLWKEGKEME 522
+++L KEG M+
Sbjct: 259 EELFKLLKEGHRMD 272
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
+++G+ +L S K IHRDL N+LL ++ V KI DFG+AR +N
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS--GKRNSGFYLTGHAQTLLAYVWQLWKE 517
+MAPE + ++S KSDV+S+GV++ EI S G G + + L +E
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL-------RE 317
Query: 518 GKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALLG 566
G M S P++ + I L C DP RP + +V LG
Sbjct: 318 GMRMR------APEYSTPEIYQ---IMLDCWHRDPKERPRFAELVEKLG 357
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
F + +G GGFG V+K +GK ++R+ + E+ + E+ +AKL H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVH 69
Query: 353 LVGC--GIE-----GEEKLLIYELMPNRSLD-------CFIFDSE--------------R 384
GC G + ++ L + P S + C E R
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 385 RLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF 444
+L+ + I+KG+ Y+H K+IHRDLKPSN+ L KI DFG+
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 445 CENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
+ K ++ GT YM+PE + + D+++ G+I+ E++
Sbjct: 187 KNDGKRTRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 46/290 (15%)
Query: 300 LGQGGFGTVYKGVLPNGK------EVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG+G FG V K + K VAVK L S L + +E ++ ++ H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSER---------------------RLQLNWN 391
L G + LLI E SL F+ +S + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 392 TCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTA 451
+ IS+G+ YL E +K++HRDL N+L+ + KISDFG++R E
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYV 511
+ +MA E + +++ +SDV+SFGV++ EI++ N + +
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP------YPGIPPERL 261
Query: 512 WQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNV 561
+ L K G ME D + ++ R + L C +++P RP +++
Sbjct: 262 FNLLKTGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 283 HLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLE---EFKNE 338
H+ +D + LG GG V+ L + ++VAVK L + F+ E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 339 IILIAKLQHRNLVRLVGCG----IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
A L H +V + G G ++ E + +L + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAI 119
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT-ANT 453
+I + L + H++ IIHRD+KP+N+L+ K+ DFG+AR ++ + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAY 510
V+GT Y++PE A +SDV+S G ++ E+++G+ TG + +AY
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAY 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 120/278 (43%), Gaps = 33/278 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCGIE 359
+G+G FG VY G + + + R + L+ FK E++ + +H N+V +G +
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 360 GEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRD 419
+I L R+L + D+ ++ L+ N I I KG+ YLH I+H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 420 LKPSNVLLDKDMVAKISDFGM---ARIFCENQKTANTRRVVGTYGYMAPEYAMEGL---- 472
LK NV D V I+DFG+ + + ++ R G ++APE +
Sbjct: 156 LKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 473 -----FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPL 527
FS SDVF+ G I E+ + R F Q A +WQ+ G M+ P
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHA--REWPF----KTQPAEAIIWQM---GTGMK---PN 262
Query: 528 LMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
L S I I L C + RPT + ++ +L
Sbjct: 263 L---SQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLEEFKNEIILIAKL 345
++ A+D F + LGQG FG V K + + A+K++ R + + L +E++L+A L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASL 59
Query: 346 QHRNLVRLVGCGIE------------GEEKLLI-YELMPNRSLDCFIFDSERRLQLNWNT 392
H+ +VR +E + L I E NR+L I L +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN--LNQQRDE 117
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR--------IF 444
+ + I + L Y+H IIHRDLKP N+ +D+ KI DFG+A+ +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 445 CENQK----TANTRRVVGTYGYMAPE-YAMEGLFSVKSDVFSFGVIVLEII 490
++Q + N +GT Y+A E G ++ K D++S G+I E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 300 LGQGGFGTVYKGVLP-NGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+G G +G+V + +G++VA+K+LSR +S + E++L+ +QH N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 357 GIEGEEKLLIYE---LMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
Y+ +MP D L+ + ++ + KGL Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG-- 146
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL- 472
++HRDLKP N+ +++D KI DFG+AR A V T Y APE + +
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMH 200
Query: 473 FSVKSDVFSFGVIVLEIISGK 493
++ D++S G I+ E+++GK
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF-------------IFDSERRLQLNWNTCYNI 396
++ L+ P RSL+ F + + + +L + +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 31/214 (14%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 350 LVRLVGCGI------EGEEKLLIYELMP---NRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ L+ E + L+ LM N + C +L + +I I
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--------AKLTDDHVQFLIYQI 130
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T V T
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATR 182
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 299 KLGQGGFGTVYKG--VLPNGKEVAVKRLSRKSWQ---GLEEFKNEIIL--IAKLQHRNLV 351
++G+G +G V+K + G+ VA+KR+ ++ + L + +L + +H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 352 RLVG-CGI---EGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLY 406
RL C + + E KL L++E + ++ L ++ D + T +++ + +GL +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH +++HRDLKP N+L+ K++DFG+ARI+ + VV T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VVVTLWYRAPE 189
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGK 493
++ ++ D++S G I E+ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKLQH 347
+ F LG+G FG VY K + A+K L + + G+E + + E+ + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N++RL G + LI E P L + ++ + + I ++ L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H ++IHRD+KP N+LL + KI+DFG + +++T + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT----LCGTLDYLPPEM 181
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISG 492
+ K D++S GV+ E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGVLP----NGKEVAVKRLSRKSWQGLEE-FKNEIILIAKLQHR 348
F LG G F V VL GK AVK + +K+ +G E +NEI ++ K++H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 349 NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
N+V L L+ +L+ L I + + + +T +I + + YLH
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH 137
Query: 409 EDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
R+ I+HRDLKP N+L D++ ISDFG++++ K GT GY+AP
Sbjct: 138 ---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAP 191
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + +S D +S GVI ++ G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 188
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 283 HLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLE---EFKNE 338
H+ +D + LG GG V+ L + ++VAVK L + F+ E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 339 IILIAKLQHRNLVRLVGCG----IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
A L H +V + G G ++ E + +L + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAI 119
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT-ANT 453
+I + L + H++ IIHRD+KP+N+++ K+ DFG+AR ++ + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAY 510
V+GT Y++PE A +SDV+S G ++ E+++G+ TG + +AY
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAY 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 31/214 (14%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 350 LVRLVGCGI------EGEEKLLIYELMP---NRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ L+ E + L+ LM N + C +L + +I I
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--------QKLTDDHVQFLIYQI 130
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T V T
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATR 182
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----Y 187
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 103 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 202
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 102 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 150 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 201
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 299 KLGQGGFGTVYKG--VLPNGKEVAVKRLSRKSWQ---GLEEFKNEIIL--IAKLQHRNLV 351
++G+G +G V+K + G+ VA+KR+ ++ + L + +L + +H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 352 RLVG-CGI---EGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLY 406
RL C + + E KL L++E + ++ L ++ D + T +++ + +GL +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH +++HRDLKP N+L+ K++DFG+ARI+ + VV T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VVVTLWYRAPE 189
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGK 493
++ ++ D++S G I E+ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 283 HLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLE---EFKNE 338
H+ +D + LG GG V+ L + ++VAVK L + F+ E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 339 IILIAKLQHRNLVRLVGCG----IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
A L H +V + G G ++ E + +L + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAI 119
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT-ANT 453
+I + L + H++ IIHRD+KP+N+++ K+ DFG+AR ++ + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAY 510
V+GT Y++PE A +SDV+S G ++ E+++G+ TG + +AY
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPDSVAY 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----Y 187
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K ++Y N LD ++ ++ R+ +++ + I
Sbjct: 76 VRLRYFFYSSGEKKDVVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 39/212 (18%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRNLVRLVG 355
+G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 356 CGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------IIGGISK 402
P RSL+ F ++ + + N +I I +
Sbjct: 99 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 146
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T V T Y
Sbjct: 147 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATRWY 198
Query: 463 MAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
APE + + ++ D++S G I+ E+++G+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 299 KLGQGGFGTVYKG--VLPNGKEVAVKRLSRKSWQ---GLEEFKNEIIL--IAKLQHRNLV 351
++G+G +G V+K + G+ VA+KR+ ++ + L + +L + +H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 352 RLVG-CGI---EGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLY 406
RL C + + E KL L++E + ++ L ++ D + T +++ + +GL +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH +++HRDLKP N+L+ K++DFG+ARI+ + VV T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VVVTLWYRAPE 189
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISGK 493
++ ++ D++S G I E+ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 300 LGQGGFGTVYKGVLP-NGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+G G +G+V + +G++VA+K+LSR +S + E++L+ +QH N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 357 GIEGEEKLLIYE---LMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
Y+ +MP D ++ + ++ + KGL Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL- 472
++HRDLKP N+ +++D KI DFG+AR A V T Y APE + +
Sbjct: 165 -VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMH 218
Query: 473 FSVKSDVFSFGVIVLEIISGK 493
++ D++S G I+ E+++GK
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGK 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF-------------IFDSERRLQLNWNTCYNI 396
++ L+ P RSL+ F + + + +L + +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 43/246 (17%)
Query: 266 SLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRL 324
S++QE +EL I + + + + +G G +G+V G VAVK+L
Sbjct: 2 SMSQERPTFYRQELN----KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 57
Query: 325 SRKSWQGLEEFKN---EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCF--I 379
SR +Q + K E+ L+ ++H N++ L+ P RSL+ F +
Sbjct: 58 SR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDV 104
Query: 380 FDSERRLQLNWNTCYN-----------IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD 428
+ + + N +I I +GL Y+H IIHRDLKPSN+ ++
Sbjct: 105 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 161
Query: 429 KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVL 487
+D KI DFG+AR +++ T V T Y APE + + ++ D++S G I+
Sbjct: 162 EDSELKILDFGLAR-HTDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 488 EIISGK 493
E+++G+
Sbjct: 217 ELLTGR 222
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF Y+ + KEV ++ KS E+ EI + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ E+ RSL + +RR + + +G+ YLH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMA-RIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
IHRDLK N+ L+ DM KI DFG+A +I + ++ + + GT Y+APE + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEVLCKKGHS 220
Query: 475 VKSDVFSFGVIVLEIISGK 493
+ D++S G I+ ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLPNGKE----VAVKRL--SRKSWQGLE-EFKNEIILIAK 344
D F LG+G FG VY L K+ VA+K L S+ +G+E + + EI + A
Sbjct: 23 DDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSL-----DCFIFDSERRLQLNWNTCYNIIGG 399
L H N++RL + LI E P L FD +R I+
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQR--------TATIMEE 131
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
++ L+Y H K+IHRD+KP N+LL KI+DFG + + + + + GT
Sbjct: 132 LADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGT 184
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQT 506
Y+ PE + + K D++ GV+ E++ G N F H +T
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG--NPPFESASHNET 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 94 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 142 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG----Y 193
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 124
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R + I+G +S K
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------QILGKVSIAVIK 177
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 178 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 231
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 43/246 (17%)
Query: 266 SLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRL 324
S++QE +EL I + + + + +G G +G+V G VAVK+L
Sbjct: 2 SMSQERPTFYRQELN----KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 57
Query: 325 SRKSWQGLEEFKN---EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCF--I 379
SR +Q + K E+ L+ ++H N++ L+ P RSL+ F +
Sbjct: 58 SR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDV 104
Query: 380 FDSERRLQLNWNTCYN-----------IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD 428
+ + + N +I I +GL Y+H IIHRDLKPSN+ ++
Sbjct: 105 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 161
Query: 429 KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVL 487
+D KI DFG+AR +++ T V T Y APE + + ++ D++S G I+
Sbjct: 162 EDCELKILDFGLAR-HTDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 488 EIISGK 493
E+++G+
Sbjct: 217 ELLTGR 222
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF Y+ + KEV ++ KS E+ EI + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ E+ RSL + +RR + + +G+ YLH + ++
Sbjct: 94 FFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 147
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMA-RIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
IHRDLK N+ L+ DM KI DFG+A +I + ++ + + GT Y+APE + S
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPEVLCKKGHS 204
Query: 475 VKSDVFSFGVIVLEIISGK 493
+ D++S G I+ ++ GK
Sbjct: 205 FEVDIWSLGCILYTLLVGK 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGL--EEFKNEIILIAKLQHRNL 350
+ D +G G +G V V G +VA+K+L R L + E+ L+ ++H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 351 VRLVGCGIEGE---EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
+ L+ E + Y +MP D +L + ++ + KGL Y+
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKL--GEDRIQFLVYQMLKGLRYI 144
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H IIHRDLKP N+ +++D KI DFG+AR Q + V T Y APE
Sbjct: 145 HAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEV 196
Query: 468 AMEGL-FSVKSDVFSFGVIVLEIISGK 493
+ + ++ D++S G I+ E+I+GK
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW--------QGLEEFKNE 338
KA D + S LG G G V K+VA++ +S++ + + E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 339 IILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
I ++ KL H ++++ + E+ ++ ELM L + ++R L TC
Sbjct: 205 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFY 260
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRR 455
+ + YLHE+ IIHRDLKP NVLL ++D + KI+DFG ++I E T+ R
Sbjct: 261 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRT 314
Query: 456 VVGTYGYMAPEYAME---GLFSVKSDVFSFGVIVLEIISG 492
+ GT Y+APE + ++ D +S GVI+ +SG
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 43/246 (17%)
Query: 266 SLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRL 324
S++QE +EL I + + + + +G G +G+V G VAVK+L
Sbjct: 12 SMSQERPTFYRQELN----KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 67
Query: 325 SRKSWQGLEEFKN---EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCF--I 379
SR +Q + K E+ L+ ++H N++ L+ P RSL+ F +
Sbjct: 68 SR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDV 114
Query: 380 FDSERRLQLNWNTCYN-----------IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD 428
+ + + N +I I +GL Y+H IIHRDLKPSN+ ++
Sbjct: 115 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 171
Query: 429 KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVL 487
+D KI DFG+AR +++ T V T Y APE + + ++ D++S G I+
Sbjct: 172 EDCELKILDFGLAR-HTDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 488 EIISGK 493
E+++G+
Sbjct: 227 ELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 43/246 (17%)
Query: 266 SLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRL 324
S++QE +EL I + + + + +G G +G+V G VAVK+L
Sbjct: 12 SMSQERPTFYRQELN----KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 67
Query: 325 SRKSWQGLEEFKN---EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCF--I 379
SR +Q + K E+ L+ ++H N++ L+ P RSL+ F +
Sbjct: 68 SR-PFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDV 114
Query: 380 FDSERRLQLNWNTCYN-----------IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD 428
+ + + N +I I +GL Y+H IIHRDLKPSN+ ++
Sbjct: 115 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 171
Query: 429 KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVL 487
+D KI DFG+AR +++ T V T Y APE + + ++ D++S G I+
Sbjct: 172 EDCELKILDFGLAR-HTDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 488 EIISGK 493
E+++G+
Sbjct: 227 ELLTGR 232
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 27/232 (11%)
Query: 277 EELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLS----RKSWQG 331
+ELP A K + + +G+G V + V G E AVK + R S +
Sbjct: 81 DELP--DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQ 138
Query: 332 LEEFKNEI-----ILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL 386
LEE + IL H +++ L+ L+++LM R + F + +E+ +
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM--RKGELFDYLTEK-V 195
Query: 387 QLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE 446
L+ +I+ + + + +LH ++ I+HRDLKP N+LLD +M ++SDFG + C
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS---CH 249
Query: 447 NQKTANTRRVVGTYGYMAPEY---AMEGL---FSVKSDVFSFGVIVLEIISG 492
+ R + GT GY+APE +M+ + + D+++ GVI+ +++G
Sbjct: 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW--------QGLEEFKNE 338
KA D + S LG G G V K+VA++ +S++ + + E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 339 IILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
I ++ KL H ++++ + E+ ++ ELM L + ++R L TC
Sbjct: 191 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFY 246
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRR 455
+ + YLHE+ IIHRDLKP NVLL ++D + KI+DFG ++I E T+ R
Sbjct: 247 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TSLMRT 300
Query: 456 VVGTYGYMAPEYAME---GLFSVKSDVFSFGVIVLEIISG 492
+ GT Y+APE + ++ D +S GVI+ +SG
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF Y+ + KEV ++ KS E+ EI + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ E+ RSL + +RR + + +G+ YLH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMA-RIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
IHRDLK N+ L+ DM KI DFG+A +I + ++ + + GT Y+APE + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPNYIAPEVLCKKGHS 220
Query: 475 VKSDVFSFGVIVLEIISGK 493
+ D++S G I+ ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG----Y 188
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 46/290 (15%)
Query: 300 LGQGGFGTVYKGVLPNGK------EVAVKRLSRK-SWQGLEEFKNEIILIAKLQHRNLVR 352
LG+G FG V K + K VAVK L S L + +E ++ ++ H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSER---------------------RLQLNWN 391
L G + LLI E SL F+ +S + L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 392 TCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTA 451
+ IS+G+ YL E + ++HRDL N+L+ + KISDFG++R E
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 452 NTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYV 511
+ +MA E + +++ +SDV+SFGV++ EI++ N + +
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP------YPGIPPERL 261
Query: 512 WQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNV 561
+ L K G ME D + ++ R + L C +++P RP +++
Sbjct: 262 FNLLKTGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSW----QGLEEFKNEIILIAKLQHRNLVRLVG 355
LG+GGF Y+ + KEV ++ KS E+ EI + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + ++ E+ RSL + +RR + + +G+ YLH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSL---LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMA-RIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
IHRDLK N+ L+ DM KI DFG+A +I + ++ + + GT Y+APE + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLCKKGHS 220
Query: 475 VKSDVFSFGVIVLEIISGK 493
+ D++S G I+ ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 85 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 184
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 187
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 82 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 130 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 181
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 189
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 188
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 85 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 184
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----X 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 187
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 386 LQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
L L CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR
Sbjct: 197 LTLEHLICYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 251
Query: 446 ENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQ 505
++ +MAPE + +++++SDV+SFGV++ EI S G +
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 307
Query: 506 TLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ +L KEG M D + P++ + + L C +P+ RPT S +V L
Sbjct: 308 IDEEFCRRL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
Query: 566 GS 567
G+
Sbjct: 358 GN 359
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 80 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 128 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 179
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 31/214 (14%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 350 LVRLVGCGI------EGEEKLLIYELMP---NRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ L+ E + L+ LM N + C +L + +I I
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--------QKLTDDHVQFLIYQI 130
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T V T
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----YVATR 182
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 80 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 128 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 179
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 102 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 150 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 201
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 386 LQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
L L CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR
Sbjct: 195 LTLEHLICYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 249
Query: 446 ENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQ 505
++ +MAPE + +++++SDV+SFGV++ EI S G +
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 305
Query: 506 TLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ +L KEG M D + P++ + + L C +P+ RPT S +V L
Sbjct: 306 IDEEFCRRL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
Query: 566 GS 567
G+
Sbjct: 356 GN 357
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 81 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 129 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 180
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 188
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 25/218 (11%)
Query: 290 ATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR 348
+ D ++G+G +G+V K V P+G+ +AVKR+ R + E+ + ++++ + R
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVD--EKEQKQLLMDLDVVMR 76
Query: 349 N-----LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-- 401
+ +V+ G + + ELM + S D F L+ I+G I+
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELM-STSFDKFY--KYVYSVLDDVIPEEILGKITLA 133
Query: 402 --KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
K L +L E+ LKIIHRD+KPSN+LLD+ K+ DFG++ ++ A TR G
Sbjct: 134 TVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS--IAKTRD-AGC 188
Query: 460 YGYMAPEY----AMEGLFSVKSDVFSFGVIVLEIISGK 493
YMAPE A + V+SDV+S G+ + E+ +G+
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 103 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 202
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 35/210 (16%)
Query: 300 LGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRNLVRL 353
+G G +G+V Y L ++VAVK+LSR +Q L + E+ L+ L+H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 354 V-----GCGIEG-EEKLLIYELMP---NRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+ IE E L+ LM N + C S+ +Q ++ + +GL
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL-SDEHVQF-------LVYQLLRGL 136
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
Y+H IIHRDLKPSNV +++D +I DFG+AR Q V T Y A
Sbjct: 137 KYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRA 188
Query: 465 PEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
PE + + ++ D++S G I+ E++ GK
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 106 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 154 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 205
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R + I+G +S K
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------QILGKVSIAVIK 115
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 169
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R + I+G +S K
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------QILGKVSIAVIK 115
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 169
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 386 LQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
L L CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR
Sbjct: 188 LTLEHLICYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 242
Query: 446 ENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQ 505
++ +MAPE + +++++SDV+SFGV++ EI S G +
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 298
Query: 506 TLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ +L KEG M D + P++ + + L C +P+ RPT S +V L
Sbjct: 299 IDEEFCRRL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
Query: 566 GS 567
G+
Sbjct: 349 GN 350
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 20/228 (8%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPN------GKEVAVKRLSRK 327
+ +E L F +A TD + +LG+G F V + V K + K+LS +
Sbjct: 13 LGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR 72
Query: 328 SWQGLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ 387
Q LE E + L+H N+VRL E L+++L+ L I E +
Sbjct: 73 DHQKLE---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE 129
Query: 388 LNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIF 444
+ + C I I + + ++H+ I+HRDLKP N+LL K K++DFG+A I
Sbjct: 130 ADASHC---IHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLA-IE 182
Query: 445 CENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+ ++ A GT GY++PE + + D+++ GVI+ ++ G
Sbjct: 183 VQGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V G++VA+K +++K QG + EI + L+H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 73
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
+E +++ E N D + +R +++ I + Y H R
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCH---RH 126
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
KI+HRDLKP N+LLD+ + KI+DFG++ I + + G+ Y APE L+
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLY 183
Query: 474 S-VKSDVFSFGVIV 486
+ + DV+S GVI+
Sbjct: 184 AGPEVDVWSCGVIL 197
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K K QG + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQG-KAFKNRELQIMRKLDHCNI 75
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 76 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R + I+G +S K
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------QILGKVSIAVIK 115
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 169
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 111 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY 221
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 222 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V G++VA+K +++K QG + EI + L+H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 79
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
+E +++ E N D + +R +++ I + Y H R
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCH---RH 132
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
KI+HRDLKP N+LLD+ + KI+DFG++ I + + G+ Y APE L+
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLY 189
Query: 474 S-VKSDVFSFGVIV 486
+ + DV+S GVI+
Sbjct: 190 AGPEVDVWSCGVIL 203
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 386 LQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
L L CY+ ++KG+ +L + K IHRDL N+LL + V KI DFG+AR
Sbjct: 190 LTLEHLICYSF--QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
Query: 446 ENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQ 505
++ +MAPE + +++++SDV+SFGV++ EI S G +
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 300
Query: 506 TLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVALL 565
+ +L KEG M D + P++ + + L C +P+ RPT S +V L
Sbjct: 301 IDEEFCRRL-KEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
Query: 566 GS 567
G+
Sbjct: 351 GN 352
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K K QG + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQG-KAFKNRELQIMRKLDHCNI 75
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 76 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V G++VA+K +++K QG + EI + L+H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 69
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
+E +++ E N D + +R +++ I + Y H R
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCH---RH 122
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
KI+HRDLKP N+LLD+ + KI+DFG++ I + + G+ Y APE L+
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLY 179
Query: 474 S-VKSDVFSFGVIV 486
+ + DV+S GVI+
Sbjct: 180 AGPEVDVWSCGVIL 193
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 94 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR +++ T
Sbjct: 142 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG----Y 193
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQ--GLE-EFKNEIILIAKLQH 347
+ F LG+G FG VY K + A+K L + + G+E + + E+ + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
N++RL G + LI E P L + ++ + + I ++ L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H ++IHRD+KP N+LL + KI+DFG + + ++ + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISG 492
+ K D++S GV+ E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 112
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 113 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 169 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY 223
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 224 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 43/246 (17%)
Query: 266 SLTQEGDLVSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRL 324
S++QE +EL I + + + + +G G +G+V G VAVK+L
Sbjct: 12 SMSQERPTFYRQELN----KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 67
Query: 325 SRKSWQGLEEFKN---EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCF--I 379
S K +Q + K E+ L+ ++H N++ L+ P RSL+ F +
Sbjct: 68 S-KPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDV 114
Query: 380 FDSERRLQLNWNTCYN-----------IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD 428
+ + + N +I I +GL Y+H IIHRDLKPSN+ ++
Sbjct: 115 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVN 171
Query: 429 KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVL 487
+D KI DFG+AR +++ T V T Y APE + + ++ D++S G I+
Sbjct: 172 EDCELKILDFGLAR-HTDDEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 488 EIISGK 493
E+++G+
Sbjct: 227 ELLTGR 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 111 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY 221
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 222 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 140
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRK-----SWQGLEEFKNEIILIAKLQHRNLVRL 353
LG+G FG V G++VA+K +++K QG + EI + L+H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 78
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRL 413
+E +++ E N D + +R +++ I + Y H R
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCH---RH 131
Query: 414 KIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
KI+HRDLKP N+LLD+ + KI+DFG++ I + + G+ Y APE L+
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLY 188
Query: 474 S-VKSDVFSFGVIV 486
+ + DV+S GVI+
Sbjct: 189 AGPEVDVWSCGVIL 202
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 XXKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 35/210 (16%)
Query: 300 LGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRNLVRL 353
+G G +G+V Y L ++VAVK+LSR +Q L + E+ L+ L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 354 V-----GCGIEG-EEKLLIYELMP---NRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+ IE E L+ LM N + C S+ +Q ++ + +GL
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL-SDEHVQF-------LVYQLLRGL 144
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
Y+H IIHRDLKPSNV +++D +I DFG+AR Q V T Y A
Sbjct: 145 KYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRA 196
Query: 465 PEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
PE + + ++ D++S G I+ E++ GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 81
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 82 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 138 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY 192
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 193 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
Query: 283 HLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLE---EFKNE 338
H+ +D + LG GG V+ L ++VAVK L + F+ E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 339 IILIAKLQHRNLVRLVGCG----IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
A L H +V + G G ++ E + +L + +
Sbjct: 63 AQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAI 119
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN-QKTANT 453
+I + L + H++ IIHRD+KP+N+++ K+ DFG+AR ++ T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAY 510
V+GT Y++PE A +SDV+S G ++ E+++G+ TG + +AY
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAY 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 140
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 XXKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y +L + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAIL--ERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ ++ ELM + +L I D ER L Y ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLV 137
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR T VV
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVT 188
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y Y APE + + D++S GVI+ E+I G
Sbjct: 189 RY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 83
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 84 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 140 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 194
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 195 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 89
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R I+G +S K
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-------IPEQILGKVSIAVIK 142
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 143 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 196
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 104
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 105 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 161 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY 215
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 216 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 114
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 115 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 171 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY 225
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 226 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 140
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 25/219 (11%)
Query: 284 LAVIKAATDGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILI 342
+A+ + D F ++LG G G V+K P+G +A K + + + +N+II
Sbjct: 1 MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRE 57
Query: 343 AKLQHR----NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
++ H +V G E + E M SLD + + R + I+G
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------QILG 110
Query: 399 GIS----KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR 454
+S KGL YL E + KI+HRD+KPSN+L++ K+ DFG++ + + AN
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--EMAN-- 164
Query: 455 RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
VGT YM+PE +SV+SD++S G+ ++E+ G+
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R + I+G +S K
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------QILGKVSIAVIK 115
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 169
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R + I+G +S K
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-------QILGKVSIAVIK 115
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 169
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y +L + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ ++ ELM + +L I D ER L Y ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLV 137
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR T VV
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVT 188
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y Y APE + + D++S GVI+ E+I G
Sbjct: 189 RY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 94
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 95 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 151 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 205
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 206 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 88 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 144 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 198
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 199 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 350 LVRL----VGCGIEG-EEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
++ + IE ++ L+ LM D + + L N + CY + I +GL
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLM---GADLYKLLKTQHLS-NDHICY-FLYQILRGL 157
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYM 463
Y+H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y
Sbjct: 158 KYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 464 APEYAMEGLFSVKS-DVFSFGVIVLEIISGK 493
APE + KS D++S G I+ E++S +
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 76 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR ++ T
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----Y 189
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 89 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 145 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY 199
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 200 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 88
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 89 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 145 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 199
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 200 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 103 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGX 202
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 36/222 (16%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQH 347
KA F LGQG FG V+ VK++S + L + +++ A L+
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF----------LVKKISGSDARQL--YAMKVLKKATLKV 67
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQL--NWNTCYNIIGGISKGLL 405
R+ VR + E +L+ P + F +E +L L ++ ++ +SK ++
Sbjct: 68 RDRVR-----TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM 122
Query: 406 YLHEDSR---------------LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT 450
+ ED + L II+RDLKP N+LLD++ K++DFG+++ +++K
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 451 ANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
A + GT YMAPE + +D +SFGV++ E+++G
Sbjct: 183 AYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR ++ T
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----Y 189
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVK----RLSRKSWQGL--EEFKNEII 340
+ D + +LG G F V K G E A K R SR S +G+ EE + E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ ++ H N++ L + +LI EL+ L F+ E L+ + I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQI 124
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNV-LLDKDM---VAKISDFGMARIFCENQKTANTRRV 456
G+ YLH KI H DLKP N+ LLDK++ K+ DFG+A E + + +
Sbjct: 125 LDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNI 178
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
GT ++APE +++D++S GVI ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 76
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 77 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 133 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 187
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 188 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 76 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 79 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 178
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y VL + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSR-PFQNQTHAKRAYRELVLMKXVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ L+ ELM + +L I D ER L Y ++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYL----LYQMLX 137
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR TA T ++
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMT 183
Query: 459 TY----GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y Y APE + + D++S G I+ E++ K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 140
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVK----RLSRKSWQGL--EEFKNEII 340
+ D + +LG G F V K G E A K R SR S +G+ EE + E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ ++ H N++ L + +LI EL+ L F+ E L+ + I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQI 124
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRV 456
G+ YLH KI H DLKP N+ LLDK++ K+ DFG+A E + + +
Sbjct: 125 LDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNI 178
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
GT ++APE +++D++S GVI ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVK----RLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K G E A K R SR S +G+ EE + E+ ++ +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+ H N++ L + +LI EL+ L F+ E L+ + I I G+
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGV 128
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH KI H DLKP N+ LLDK++ K+ DFG+A E + + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFGTP 182
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 155
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 156 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 212 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY 266
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 267 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR ++ T
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG----Y 189
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 80
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 81 RLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 137 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY 191
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 192 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 142
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVK----RLSRKSWQGL--EEFKNEII 340
+ D + +LG G F V K G E A K R SR S +G+ EE + E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ ++ H N++ L + +LI EL+ L F+ E L+ + I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQI 124
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNV-LLDKDM---VAKISDFGMARIFCENQKTANTRRV 456
G+ YLH KI H DLKP N+ LLDK++ K+ DFG+A E + + +
Sbjct: 125 LDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNI 178
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
GT ++APE +++D++S GVI ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 293 GFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNL 350
++D+ +G G FG VY+ L +G+ VA+K++ + + FKN E+ ++ KL H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 351 VRL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS-------- 401
VRL GE+K +Y N LD ++ ++ R+ +++ + I
Sbjct: 76 VRLRYFFYSSGEKKDEVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGT 459
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N +
Sbjct: 132 FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 460 YGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y Y APE ++ DV+S G ++ E++ G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 300 LGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRNLVRL 353
+G G +G+V Y L ++VAVK+LSR +Q L + E+ L+ L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 354 V-----GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
+ IE ++ + + L+ + + L+ ++ + +GL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
IIHRDLKPSNV +++D +I DFG+AR Q V T Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIM 200
Query: 469 MEGL-FSVKSDVFSFGVIVLEIISGK 493
+ + ++ D++S G I+ E++ GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVK----RLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K G E A K R SR S +G+ EE + E+ ++ +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+ H N++ L + +LI EL+ L F+ E L+ + I I G+
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGV 128
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH KI H DLKP N+ LLDK++ K+ DFG+A E + + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFGTP 182
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 300 LGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEE--FKNEIILIAKLQHRNLVRLVGC 356
+G G +G K +GK + K L S E+ +E+ L+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 357 GIEGEEKLL--IYELMPNRSLDCFIFD-SERRLQLNWNTCYNIIGGISKGLLYLHE--DS 411
I+ L + E L I ++ R L+ ++ ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
++HRDLKP+NV LD K+ DFG+ARI N T+ + VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 472 LFSVKSDVFSFGVIVLEI 489
++ KSD++S G ++ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 19/237 (8%)
Query: 283 HLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLE---EFKNE 338
H+ +D + LG GG V+ L ++VAVK L + F+ E
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 339 IILIAKLQHRNLVRLVGCG----IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
A L H +V + G G ++ E + +L + +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAI 119
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT-ANT 453
+I + L + H++ IIHRD+KP+N+++ K+ DFG+AR ++ + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAY 510
V+GT Y++PE A +SDV+S G ++ E+++G+ TG + +AY
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAY 229
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 258 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 306
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 307 PGIPVEELFKLLKEGHRMD 325
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI D+G+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVK----RLSRKSWQGL--EEFKNEII 340
+ D + +LG G F V K G E A K R SR S +G+ EE + E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ ++ H N++ L + +LI EL+ L F+ E L+ + I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQI 124
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRV 456
G+ YLH KI H DLKP N+ LLDK++ K+ DFG+A E + + +
Sbjct: 125 LDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNI 178
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
GT ++APE +++D++S GVI ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 294 FSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
++D+ +G G FG VY+ L +G+ VA+K K QG + FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQG-KAFKNRELQIMRKLDHCNIV 76
Query: 352 RL-VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--------- 401
RL GE+K +Y N LD ++ + R+ +++ + I
Sbjct: 77 RLRYFFYSSGEKKDEVYL---NLVLD-YVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTY 460
+ L Y+H I HRD+KP N+LLD D V K+ DFG A+ + N + Y
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY 187
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
Y APE ++ DV+S G ++ E++ G+
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 126
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 180
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 36/222 (16%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQH 347
KA F LGQG FG V+ VK++S + L K ++ A L+
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF----------LVKKISGSDARQLYAMK--VLKKATLKV 68
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQL--NWNTCYNIIGGISKGLL 405
R+ VR + E +L+ P + F +E +L L ++ ++ +SK ++
Sbjct: 69 RDRVR-----TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM 123
Query: 406 YLHEDSR---------------LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT 450
+ ED + L II+RDLKP N+LLD++ K++DFG+++ +++K
Sbjct: 124 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 183
Query: 451 ANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
A + GT YMAPE + +D +SFGV++ E+++G
Sbjct: 184 AYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 36/256 (14%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ 448
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 449 KTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--HAQT 506
NT +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGI 263
Query: 507 LLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 264 PVEELFKLLKEGHRMD 279
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 160
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF-------------IFDSERRLQLNWNTCYNI 396
++ L+ P RSL+ F + + + +L + +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+ R +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 126
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 180
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 232
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 233 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 267
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V+K P+G +A K + + + +N+II ++ H
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 81
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + + R I+G +S K
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-------IPEQILGKVSIAVIK 134
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + KI+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 135 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 188
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
M+PE +SV+SD++S G+ ++E+ G+
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 300 LGQGGFGTVYKGVLPNGK---EVAVKRLSR-KSWQGLEEFKNEIILIAKL-QHRNLVRLV 354
+G+G FG V K + + A+KR+ S +F E+ ++ KL H N++ L+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 355 G-CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ--------------LNWNTCYNIIGG 399
G C G L I E P+ +L F+ S R L+ L+ +
Sbjct: 83 GACEHRGYLYLAI-EYAPHGNLLDFLRKS-RVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
+++G+ YL S+ + IHRDL N+L+ ++ VAKI+DFG++R + ++ +G
Sbjct: 141 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGR 192
Query: 460 YG--YMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+MA E +++ SDV+S+GV++ EI+S
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 300 LGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEE--FKNEIILIAKLQHRNLVRLVGC 356
+G G +G K +GK + K L S E+ +E+ L+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 357 GIEGEEKLL--IYELMPNRSLDCFIFD-SERRLQLNWNTCYNIIGGISKGLLYLHE--DS 411
I+ L + E L I ++ R L+ ++ ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
++HRDLKP+NV LD K+ DFG+ARI N T+ + VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 472 LFSVKSDVFSFGVIVLEI 489
++ KSD++S G ++ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 36/222 (16%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQH 347
KA F LGQG FG V+ VK++S + L K ++ A L+
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF----------LVKKISGSDARQLYAMK--VLKKATLKV 67
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQL--NWNTCYNIIGGISKGLL 405
R+ VR + E +L+ P + F +E +L L ++ ++ +SK ++
Sbjct: 68 RDRVR-----TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM 122
Query: 406 YLHEDSR---------------LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT 450
+ ED + L II+RDLKP N+LLD++ K++DFG+++ +++K
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 451 ANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
A + GT YMAPE + +D +SFGV++ E+++G
Sbjct: 183 AYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 148
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 149 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 140
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 19/162 (11%)
Query: 333 EEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWN- 391
++FKNE+ +I +++ + G +E +IYE M N S+ F E L+ N
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF---DEYFFVLDKNY 144
Query: 392 TCY---NIIGGISKGLL----YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF 444
TC+ +I I K +L Y+H + I HRD+KPSN+L+DK+ K+SDFG + +
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESE-Y 201
Query: 445 CENQKTANTRRVVGTYGYMAPE-YAMEGLFS-VKSDVFSFGV 484
++K +R GTY +M PE ++ E ++ K D++S G+
Sbjct: 202 MVDKKIKGSR---GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 300 LGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEE--FKNEIILIAKLQHRNLVRLVGC 356
+G+G +G V K + G+ VA+K+ + + EI L+ +L+H NLV L+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 357 GIEGEEKLLIYELMPNRSLDCF-IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
+ + L++E + + LD +F + Q+ + II GI G + H I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--GFCHSH-----NI 145
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL-FS 474
IHRD+KP N+L+ + V K+ DFG AR + + V T Y APE + + +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLVGDVKYG 203
Query: 475 VKSDVFSFGVIVLEIISGK 493
DV++ G +V E+ G+
Sbjct: 204 KAVDVWAIGCLVTEMFMGE 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 298 NKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLE-EFKNEIILIAKLQHRNLVRLVG 355
+KLG+G + TVYKG VA+K + + +G E+ L+ L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
I E+ L L++E + ++ L ++ D +N + + + +GL Y H R K
Sbjct: 68 I-IHTEKSLTLVFEYL-DKDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCH---RQK 120
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL-F 473
++HRDLKP N+L+++ K++DFG+AR KT + V T Y P+ + +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDY 178
Query: 474 SVKSDVFSFGVIVLEIISGK 493
S + D++ G I E+ +G+
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 300 LGQGGFGTVYKGVLPNGK---EVAVKRLSR-KSWQGLEEFKNEIILIAKL-QHRNLVRLV 354
+G+G FG V K + + A+KR+ S +F E+ ++ KL H N++ L+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 355 G-CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ--------------LNWNTCYNIIGG 399
G C G L I E P+ +L F+ S R L+ L+ +
Sbjct: 93 GACEHRGYLYLAI-EYAPHGNLLDFLRKS-RVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
+++G+ YL S+ + IHRDL N+L+ ++ VAKI+DFG++R + ++ +G
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGR 202
Query: 460 Y--GYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+MA E +++ SDV+S+GV++ EI+S
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSW---QGLE-EFKNEIILIA 343
K D F LG+G FG VY K + ++ KS +G+E + + EI + +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKG 403
L+H N++R+ + + L+ E P L + ++ + + + ++
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEELADA 126
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L Y HE K+IHRD+KP N+L+ KI+DFG + + + R + GT Y+
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYL 179
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
PE K D++ GV+ E + G
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSW---QGLE-EFKNEIILIA 343
K D F LG+G FG VY K + ++ KS +G+E + + EI + +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKG 403
L+H N++R+ + + L+ E P L + ++ + + + ++
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEELADA 127
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L Y HE K+IHRD+KP N+L+ KI+DFG + + + R + GT Y+
Sbjct: 128 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYL 180
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
PE K D++ GV+ E + G
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 28/206 (13%)
Query: 299 KLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNL-----VR 352
+LG+G +G V K +P+G+ +AVKR+ R + E+ +++ + R + V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQ--KRLLMDLDISMRTVDCPFTVT 114
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----KGLLYLH 408
G + + ELM + SLD F ++ + +I+G I+ K L +LH
Sbjct: 115 FYGALFREGDVWICMELM-DTSLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN-QKTANTRRVVGTYGYMAPEY 467
S+L +IHRD+KPSNVL++ K+ DFG++ ++ KT + G YMAPE
Sbjct: 171 --SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA----GCKPYMAPER 224
Query: 468 AMEGL----FSVKSDVFSFGVIVLEI 489
L +SVKSD++S G+ ++E+
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 297 SNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLE---EFKNEIILIAKLQHRNLVR 352
+ LG G FG V G G +VAVK L+R+ + L+ + K EI + +H ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSR 412
L + ++ E + L +I R ++ + I + Y H R
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCH---R 129
Query: 413 LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
++HRDLKP NVLLD M AKI+DFG++ + + + R G+ Y APE L
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRL 186
Query: 473 FS-VKSDVFSFGVIVLEIISG 492
++ + D++S GVI+ ++ G
Sbjct: 187 YAGPEVDIWSCGVILYALLCG 207
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 106 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DFG+AR
Sbjct: 154 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGY 205
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKE 520
++APE +++D++S GVI ++SG + +L Q LA V +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG---ASPFLGDTKQETLANVSAV-----N 233
Query: 521 MEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSN 560
EF D +S++ + I L V+ DP R T+ +
Sbjct: 234 YEFEDEYFSNTSALAKDF----IRRLLVK-DPKKRMTIQD 268
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 144
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIGG 399
N++ L+ E ++ L+ ELM + +L I D ER L Y ++ G
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYL----LYQMLCG 138
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I +LH IIHRDLKPSN+++ D KI DFG+AR TA T ++
Sbjct: 139 IK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTP 184
Query: 460 Y----GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y Y APE + + D++S G I+ E++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 297 SNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLE---EFKNEIILIAKLQHRNLVR 352
+ LG G FG V G G +VAVK L+R+ + L+ + K EI + +H ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 353 LVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSR 412
L + ++ E + L +I R ++ + I + Y H R
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCH---R 129
Query: 413 LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
++HRDLKP NVLLD M AKI+DFG++ + + + R G+ Y APE L
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRL 186
Query: 473 FS-VKSDVFSFGVIVLEIISG 492
++ + D++S GVI+ ++ G
Sbjct: 187 YAGPEVDIWSCGVILYALLCG 207
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 144
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVK-----RLSRKSWQGLEEFKNEIILIAK 344
TD + +G+G F V + V L G E A K +LS + Q LE E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
L+H N+VRL E L+++L+ L I E + + + C I I + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC---IQQILEAV 116
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
L+ H+ + ++HRDLKP N+LL K K++DFG+A +Q+ GT G
Sbjct: 117 LHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPG 171
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + + D+++ GVI+ ++ G
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V +I+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 142
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
Query: 283 HLAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLE---EFKNE 338
H+ +D + LG GG V+ L ++VAVK L + F+ E
Sbjct: 20 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 79
Query: 339 IILIAKLQHRNLVRLVGCG----IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
A L H +V + G G ++ E + +L + +
Sbjct: 80 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAI 136
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN-QKTANT 453
+I + L + H++ IIHRD+KP+N+++ K+ DFG+AR ++ T
Sbjct: 137 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAY 510
V+GT Y++PE A +SDV+S G ++ E+++G+ TG + +AY
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAY 246
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSW---QGLE-EFKNEIILIA 343
K D F LG+G FG VY K + ++ KS +G+E + + EI + +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKG 403
L+H N++R+ + + L+ E P L + ++ + + + ++
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFDEQRSATFMEELADA 126
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
L Y HE K+IHRD+KP N+L+ KI+DFG + + + R + GT Y+
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYL 179
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
PE K D++ GV+ E + G
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 34/231 (14%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLEEFKNEIILIAKL 345
++ A+D F + LGQG FG V K + + A+K++ R + + L +E++L+A L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASL 59
Query: 346 QHRNLVRLVGCGIE------------GEEKLLI-YELMPNRSLDCFIFDSERRLQLNWNT 392
H+ +VR +E + L I E N +L I L +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDE 117
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR--------IF 444
+ + I + L Y+H IIHRDLKP N+ +D+ KI DFG+A+ +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 445 CENQK----TANTRRVVGTYGYMAPE-YAMEGLFSVKSDVFSFGVIVLEII 490
++Q + N +GT Y+A E G ++ K D++S G+I E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 299 KLGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFK-NEIILIAKLQHRNLVRLVG 355
K+G+G +GTV+K E VA+KR+ +G+ EI L+ +L+H+N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
++ L++E ++ L + FDS L+ + + + KGL + H SR +
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFLFQLLKGLGFCH--SR-NV 122
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG-LFS 474
+HRDLKP N+L++++ K++DFG+AR F + + V T Y P+ L+S
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE--VVTLWYRPPDVLFGAKLYS 180
Query: 475 VKSDVFSFGVIVLEIISGKR 494
D++S G I E+ + R
Sbjct: 181 TSIDMWSAGCIFAELANAAR 200
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
++ +G+G +G V Y V VA+K++S Q + EI ++ + +H N
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 350 LVR----LVGCGIEG-EEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
++ L +E + ++ +LM D + ++L N + CY + I +GL
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLM---ETDLYKLLKSQQLS-NDHICY-FLYQILRGL 157
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYM 463
Y+H + ++HRDLKPSN+L++ KI DFG+ARI E+ T V T Y
Sbjct: 158 KYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 464 APEYAMEGLFSVKS-DVFSFGVIVLEIISGK 493
APE + KS D++S G I+ E++S +
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y VL + VA+K+LSR +Q K E++L+ + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 75
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ L+ ELM + +L I D ER L Y ++
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYL----LYQMLX 130
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR TA T ++
Sbjct: 131 GIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMT 176
Query: 459 TY----GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y Y APE + + D++S G I+ E++ K
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y V N VA+K++S Q + EI ++ +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 142
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI DF +AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHR-- 348
D F ++LG G G V K P+G +A K + + + +N+II ++ H
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAI---RNQIIRELQVLHECN 72
Query: 349 --NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS----K 402
+V G E + E M SLD + +++R I+G +S +
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-------IPEEILGKVSIAVLR 125
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL YL E + +I+HRD+KPSN+L++ K+ DFG++ ++ AN+ VGT Y
Sbjct: 126 GLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS--FVGTRSY 179
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
MAPE +SV+SD++S G+ ++E+ G+
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 204 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 252
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 253 PGIPVEELFKLLKEGHRMD 271
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y VL + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ L+ ELM + +L I D ER L Y ++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYL----LYQMLX 137
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR TA T ++
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMT 183
Query: 459 TY----GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y Y APE + + D++S G I+ E++ K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 199 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 247
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 248 PGIPVEELFKLLKEGHRMD 266
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 300 LGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHRNLVRLV 354
+G G G V + VL G VAVK+LSR ++ + E++L+ + H+N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 355 GCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
E ++ L+ ELM + +L C + E + Y ++ GI +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELM-DANL-CQVIHMELDHERMSYLLYQMLCGIK----HLH 141
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
IIHRDLKPSN+++ D KI DFG+AR N T VV Y Y APE
Sbjct: 142 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FMMTPYVVTRY-YRAPEVI 195
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ + D++S G I+ E++ G
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 34/231 (14%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQGLEEFKNEIILIAKL 345
++ A+D F + LGQG FG V K + + A+K++ R + + L +E+ L+A L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASL 59
Query: 346 QHRNLVRLVGCGIE------------GEEKLLI-YELMPNRSLDCFIFDSERRLQLNWNT 392
H+ +VR +E + L I E NR+L I L +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN--LNQQRDE 117
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR--------IF 444
+ + I + L Y+H IIHR+LKP N+ +D+ KI DFG+A+ +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 445 CENQK----TANTRRVVGTYGYMAPE-YAMEGLFSVKSDVFSFGVIVLEII 490
++Q + N +GT Y+A E G ++ K D +S G+I E I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 144
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-----GVLPNGKEVAVKRLSRKSWQGL--EEFKNEIILIAK 344
D + +LG G F V K L + KR ++ S +G+ E+ + E+ ++ +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
+QH N++ L + +LI EL+ L F+ + E L + I G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGV 127
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDMVA---KISDFGMARIFCENQKTANTRRVVGTY 460
YLH L+I H DLKP N+ LLD+++ KI DFG+A + N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTP 181
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 145
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I E +L ++ +D R Q+
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 201 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 249
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 250 PGIPVEELFKLLKEGHRMD 268
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 145
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 146
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 147 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 137
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 138 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 144
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 138
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 139 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 138
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 139 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 140
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 141 ---HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 298 NKLGQGGFGTVYKGV-LPNGKEVAVK-----RLSRKSWQGLEEFKNEIILIAKLQHRNLV 351
+LG+G F V + V + G+E A K +LS + Q LE E + L+H N+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIV 84
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
RL E LI++L+ L I E + + + C I I + +L+ H+
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHC---IQQILEAVLHCHQ-- 139
Query: 412 RLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
+ ++HRDLKP N+LL K K++DFG+A I E ++ A GT GY++PE
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQA-WFGFAGTPGYLSPEVL 196
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ + D+++ GVI+ ++ G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 422
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 423 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 478
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 479 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 536 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 298 NKLGQGGFGTVYKGVLPNGKEVAVKRL---SRKSWQGLEEFK-NEIILIAKLQHRNLVRL 353
++G+G +G V+ G G++VAVK SW F+ EI ++H N++
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASW-----FRETEIYQTVLMRHENILGF 96
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED--- 410
+ I+G L+ + + ++D + L+ + + GL +LH +
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 411 --SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTA----NTRRVVGTYGYMA 464
+ I HRDLK N+L+ K+ I+D G+A F + NTR VGT YM
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR--VGTKRYMP 214
Query: 465 PEYAMEGLFS------VKSDVFSFGVIVLEI 489
PE E L + +D++SFG+I+ E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 423
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 424 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 479
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 480 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 537 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 78
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 79 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 134
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 135 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 192 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 80
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 81 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 136
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 137 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 194 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 80
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 81 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 136
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 137 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 194 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 30/224 (13%)
Query: 290 ATDGFSDSNK----LGQGGFGTVYKGVL-PNGKEVAVK--------RLSRKSWQGLEEFK 336
+T GF ++ + LG+G V + + P KE AVK S + Q L E
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 337 -NEIILIAKLQ-HRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
E+ ++ K+ H N+++L L+++LM L F + +E+ + L+
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEK-VTLSEKETR 127
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR 454
I+ + + + LH +L I+HRDLKP N+LLD DM K++DFG + C+ R
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLR 181
Query: 455 RVVGTYGYMAPEYAMEGL------FSVKSDVFSFGVIVLEIISG 492
V GT Y+APE + + + D++S GVI+ +++G
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 292 DGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSR-KSWQGLEEFKNEIILIAKLQHRN 349
D F KLG G FG V+ +G E +K +++ +S +E+ + EI ++ L H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ-LNWNTCYNIIGGISKGLLYLH 408
++++ + ++ E L I ++ R + L+ ++ + L Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 409 EDSRLKIIHRDLKPSNVLLDK---DMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
++H+DLKP N+L KI DFG+A +F ++ + N GT YMAP
Sbjct: 142 SQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALYMAP 195
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + + K D++S GV++ +++G
Sbjct: 196 EVFKRDV-TFKCDIWSAGVVMYFLLTG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y +L + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ ++ ELM + +L I D ER L Y ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLV 137
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR T VV
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVT 188
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y Y APE + + D++S G I+ E+I G
Sbjct: 189 RY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 64
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 65 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 120
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 121 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 178 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV--AVKRLSRKSWQGLEEFKNEIILIAKLQHRNLV 351
++ N +G+G +G V K + G + A K++ + + ++ FK EI ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
RL + + L+ EL L F +R+ + I+ + + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGEL--FERVVHKRV-FRESDAARIMKDVLSAVAYCH--- 123
Query: 412 RLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
+L + HRDLKP N L D K+ DFG+A F + R VGT Y++P+
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF---KPGKMMRTKVGTPYYVSPQ-V 179
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+EGL+ + D +S GV++ ++ G
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 299 KLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFK----NEIILIAKLQHRNLVRL 353
K+GQG FG V+K G++VA+K++ ++ + E F EI ++ L+H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNL 82
Query: 354 VG-CGIEGEE----KLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
+ C + K IY + D S ++ + ++ + GL Y+H
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR---RVVGTYGYMAP 465
R KI+HRD+K +NVL+ +D V K++DFG+AR F + + R RVV T Y P
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 466 EYAM-EGLFSVKSDVFSFGVIVLEI 489
E + E + D++ G I+ E+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI FG+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 60
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 61 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 116
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 117 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 174 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 30/224 (13%)
Query: 290 ATDGFSDSNK----LGQGGFGTVYKGVL-PNGKEVAVK--------RLSRKSWQGLEEFK 336
+T GF ++ + LG+G V + + P KE AVK S + Q L E
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 337 -NEIILIAKLQ-HRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCY 394
E+ ++ K+ H N+++L L+++LM L F + +E+ + L+
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEK-VTLSEKETR 127
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR 454
I+ + + + LH +L I+HRDLKP N+LLD DM K++DFG + C+ R
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLR 181
Query: 455 RVVGTYGYMAPEYAMEGL------FSVKSDVFSFGVIVLEIISG 492
V GT Y+APE + + + D++S GVI+ +++G
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 300 LGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEE--FKNEIILIAKLQHRNLVRLVGC 356
+G G +G K +GK + K L S E+ +E+ L+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 357 GIEGEEKLL--IYELMPNRSLDCFIFD-SERRLQLNWNTCYNIIGGISKGLLYLHE--DS 411
I+ L + E L I ++ R L+ ++ ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
++HRDLKP+NV LD K+ DFG+ARI ++ A + VGT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRM 191
Query: 472 LFSVKSDVFSFGVIVLEI 489
++ KSD++S G ++ E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI D G+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV--AVKRLSRKSWQGLEEFKNEIILIAKLQHRNLV 351
++ N +G+G +G V K + G + A K++ + + ++ FK EI ++ L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
RL + + L+ EL L F +R+ + I+ + + Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGEL--FERVVHKRV-FRESDAARIMKDVLSAVAYCH--- 140
Query: 412 RLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
+L + HRDLKP N L D K+ DFG+A F + R VGT Y++P+
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF---KPGKMMRTKVGTPYYVSPQ-V 196
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+EGL+ + D +S GV++ ++ G
Sbjct: 197 LEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 58
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 59 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 114
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 115 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 172 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA++++S Q + EI ++ + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 350 LVRL--VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
++ + + E+ +Y + D + + L N + CY + I +GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-NDHICY-FLYQILRGLKYI 144
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGYMAPE 466
H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 467 YAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ KS D++S G I+ E++S +
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGL-EEFKNEIILIAKLQHRN 349
+++ + +G+G +G V Y + N VA+K++S Q + EI ++ + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSL--DCFIFDSERRLQL----NWNTCYNIIGGISKG 403
++ GI + E M + + D D + L+ N + CY + I +G
Sbjct: 87 II-----GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-FLYQILRG 140
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF-CENQKTANTRRVVGTYGY 462
L Y+H + ++HRDLKPSN+LL+ KI DFG+AR+ ++ T V T Y
Sbjct: 141 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 463 MAPEYAMEGLFSVKS-DVFSFGVIVLEIISGK 493
APE + KS D++S G I+ E++S +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 70
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 71 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 126
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 127 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 184 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 41/218 (18%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y +L + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ ++ ELM + +L I D ER L Y ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLC 137
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR TA T ++
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMT 183
Query: 459 TY----GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y Y APE + + D++S G I+ E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 178
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 179 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 225
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 296 DSNKLGQGGFGTVYKG--------------VLPN-GKEVAVKRLSRKSWQGLEEFKNEII 340
+ +LG G FGTV KG +L N + A+K +E E
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----------DELLAEAN 64
Query: 341 LIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
++ +L + +VR++G E E +L+ E+ L+ ++ ++ + ++ +
Sbjct: 65 VMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQV 120
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--CENQKTANTRRVVG 458
S G+ YL E + +HRDL NVLL AKISDFG+++ EN A T
Sbjct: 121 SMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
Y APE FS KSDV+SFGV++ E S
Sbjct: 178 VKWY-APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSW---QGLEEFKNEIILI 342
I + FS +G+GGFG VY + GK A+K L +K QG NE I++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 343 AKLQHRN--LVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFD----SERRLQLNWNTCYN 395
+ + + + + +KL I +LM L + SE ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------- 296
Query: 396 IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR 455
I GL ++H +R +++RDLKP+N+LLD+ +ISD G+A F + + A+
Sbjct: 297 YAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 456 VVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISG 492
VGT+GYMAPE +G+ + +D FS G ++ +++ G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSW---QGLEEFKNEIILI 342
I + FS +G+GGFG VY + GK A+K L +K QG NE I++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 343 AKLQHRN--LVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFD----SERRLQLNWNTCYN 395
+ + + + + +KL I +LM L + SE ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------- 296
Query: 396 IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR 455
I GL ++H +R +++RDLKP+N+LLD+ +ISD G+A F + + A+
Sbjct: 297 YAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 456 VVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISG 492
VGT+GYMAPE +G+ + +D FS G ++ +++ G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 332 LEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLL--IYELMPNRSLDCFIFDSERRLQLN 389
+E+ EI ++ KL H N+V+LV + E L ++EL+ + + L+
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKPLS 135
Query: 390 WNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQK 449
+ + KG+ YLH KIIHRD+KPSN+L+ +D KI+DFG++ F
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGS 190
Query: 450 TANTRRVVGTYGYMAPEYAME--GLFSVKS-DVFSFGVIVLEIISGK 493
A VGT +MAPE E +FS K+ DV++ GV + + G+
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI D G+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y VL + VA+K+LSR +Q K E++L+ + H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 120
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS 401
+N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK 178
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 179 ----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 224
Query: 461 ---GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 134
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 135 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 181
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 182 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRK----SWQGL--EEFKNEIILIAK 344
D + +LG G F V K GKE A K + ++ S +G+ EE + E+ ++ +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
++H N++ L + +LI EL+ L F+ + E L + + I G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGV 121
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDM---VAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH +I H DLKP N+ LLDK++ K+ DFG+A + N + GT
Sbjct: 122 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTP 175
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 299 KLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFK----NEIILIAKLQHRNLVRL 353
K+GQG FG V+K G++VA+K++ ++ + E F EI ++ L+H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNL 82
Query: 354 VG-CGIEGEE----KLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
+ C + K IY + D S ++ + ++ + GL Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR---RVVGTYGYMAP 465
R KI+HRD+K +NVL+ +D V K++DFG+AR F + + R RVV T Y P
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 466 EYAM-EGLFSVKSDVFSFGVIVLEI 489
E + E + D++ G I+ E+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSW---QGLEEFKNEIILI 342
I + FS +G+GGFG VY + GK A+K L +K QG NE I++
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 343 AKLQHRN--LVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFD----SERRLQLNWNTCYN 395
+ + + + + +KL I +LM L + SE ++
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------- 295
Query: 396 IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR 455
I GL ++H +R +++RDLKP+N+LLD+ +ISD G+A F + + A+
Sbjct: 296 YAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 349
Query: 456 VVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISG 492
VGT+GYMAPE +G+ + +D FS G ++ +++ G
Sbjct: 350 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 133
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 134 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 180
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 26/218 (11%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSW---QGLEEFKNEIILI 342
I + FS +G+GGFG VY + GK A+K L +K QG NE I++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 343 AKLQHRN--LVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFD----SERRLQLNWNTCYN 395
+ + + + + +KL I +LM L + SE ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------- 296
Query: 396 IIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRR 455
I GL ++H +R +++RDLKP+N+LLD+ +ISD G+A F + + A+
Sbjct: 297 YAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 456 VVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISG 492
VGT+GYMAPE +G+ + +D FS G ++ +++ G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVK-----RLSRKSWQGLEEFKNEIILIAK 344
TD + +LG+G F V + + +P G+E A K +LS + Q LE E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
L+H N+VRL E L+++L+ L I E + + + C I I + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC---IQQILESV 116
Query: 405 LYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
+ H + I+HRDLKP N+LL K K++DFG+A +Q+ GT G
Sbjct: 117 NHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPG 171
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + + D+++ GVI+ ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 134
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 135 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 181
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 182 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRK----SWQGL--EEFKNEIILIAK 344
D + +LG G F V K GKE A K + ++ S +G+ EE + E+ ++ +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
++H N++ L + +LI EL+ L F+ + E L + + I G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGV 128
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDM---VAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH +I H DLKP N+ LLDK++ K+ DFG+A + N + GT
Sbjct: 129 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTP 182
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 300 LGQGGFGTVYKGVLPNGK---EVAVKRLSR-KSWQGLEEFKNEIILIAKL-QHRNLVRLV 354
+G+G FG V K + + A+KR+ S +F E+ ++ KL H N++ L+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 355 G-CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQ--------------LNWNTCYNIIGG 399
G C G L I E P+ +L F+ S R L+ L+ +
Sbjct: 90 GACEHRGYLYLAI-EYAPHGNLLDFLRKS-RVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
+++G+ YL S+ + IHR+L N+L+ ++ VAKI+DFG++R + ++ +G
Sbjct: 148 VARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGR 199
Query: 460 Y--GYMAPEYAMEGLFSVKSDVFSFGVIVLEIIS 491
+MA E +++ SDV+S+GV++ EI+S
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 28/218 (12%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKL 345
++ D +LG+G +G V K +P+G+ +AVKR+ R + E+ +++ +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQ--KRLLMDLDI 58
Query: 346 QHRNL-----VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGI 400
R + V G + + ELM + SLD F ++ + +I+G I
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFY---KQVIDKGQTIPEDILGKI 114
Query: 401 S----KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN-QKTANTRR 455
+ K L +LH S+L +IHRD+KPSNVL++ K+ DFG++ ++ K +
Sbjct: 115 AVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA-- 170
Query: 456 VVGTYGYMAPEYAMEGL----FSVKSDVFSFGVIVLEI 489
G YMAPE L +SVKSD++S G+ ++E+
Sbjct: 171 --GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 289 AATDGFSDSNKLGQGGFGTVY----KGVL-PNGKEVAVKRLSRKSWQGLEEFKNEIILIA 343
A +D F ++LG+G VY KG P +V K + +K + EI ++
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI------VRTEIGVLL 103
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFD----SERRLQLNWNTCYNIIGG 399
+L H N+++L E L+ EL+ L I + SER + +
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER-------DAADAVKQ 156
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDK---DMVAKISDFGMARIFCENQKTANTRRV 456
I + + YLHE+ I+HRDLKP N+L D KI+DFG+++I E+Q T V
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKT--V 210
Query: 457 VGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
GT GY APE + + D++S G+I ++ G
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGV-LPNGKEVA-----VKRLSRKSWQGLEEFKNEIILIAK 344
T+ + +LG+G F V + V + G+E A K+LS + Q LE E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
L+H N+VRL E LI++L+ L I E + + + C I I + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHC---IQQILEAV 123
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
L+ H+ + ++HR+LKP N+LL K K++DFG+A I E ++ A GT G
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQA-WFGFAGTPG 178
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + + D+++ GVI+ ++ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 140
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 141 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 139
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 140 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 186
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 187 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQHRN 349
+ + + +G G +G+V G VAVK+LSR +Q + K E+ L+ ++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYN-----------I 396
++ L+ P RSL+ F ++ + + N +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV 456
I I +GL Y+H IIHRDLKPSN+ +++D KI D G+AR +++ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDEMTG----Y 182
Query: 457 VGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
V T Y APE + + ++ D++S G I+ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVK-----RLSRKSWQGLEEFKNEIILIAK 344
TD + +LG+G F V + + +P G+E A K +LS + Q LE E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
L+H N+VRL E L+++L+ L I E + + + C I I + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC---IQQILESV 116
Query: 405 LYLHEDSRLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
+ H + I+HRDLKP N+LL K K++DFG+A +Q+ GT G
Sbjct: 117 NHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPG 171
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y++PE + + D+++ GVI+ ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 141
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 142 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 188
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y VL + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS 401
+N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK 140
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 141 ----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 461 ---GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 41/218 (18%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
+ + +G G G V Y +L + VA+K+LSR +Q K E++L+ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 82
Query: 348 RNLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIG 398
+N++ L+ E ++ ++ ELM + +L I D ER L Y ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLC 137
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
GI +LH IIHRDLKPSN+++ D KI DFG+AR TA T ++
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMT 183
Query: 459 TY----GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y Y APE + + D++S G I+ E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y VL + VA+K+LSR ++ + E++L+ + H+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ L+ ELM + +L C + E + Y ++ GI
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 141
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 142 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 188
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 42/259 (16%)
Query: 292 DGFSDSNKLGQGGFGTVY--------KGVLPNGKEVAVKRLSRKSWQ-GLEEFKNEIILI 342
D + LG+G FG V K VAVK L + + L + +E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 343 AKL-QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFI-----------FDSER--RLQL 388
+ +H+N++ L+G + +I +L ++ +D R Q+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 389 NWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCE-- 446
+ + +++G+ YL + K IHRDL NVL+ ++ V KI+DFG+AR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 447 -NQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTG--H 503
+KT N R V +MAPE + +++ +SDV+SFGV++ EI F L G +
Sbjct: 212 YYKKTTNGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPY 260
Query: 504 AQTLLAYVWQLWKEGKEME 522
+ +++L KEG M+
Sbjct: 261 PGIPVEELFKLLKEGHRMD 279
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 140
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
+LH IIHRDLKPSN+++ D KI DFG+AR T VV Y Y
Sbjct: 141 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRY-Y 191
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + + D++S G I+ E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRK----SWQGL--EEFKNEIILIAK 344
D + +LG G F V K GKE A K + ++ S +G+ EE + E+ ++ +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
++H N++ L + +LI EL+ L F+ + E L + + I G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGV 142
Query: 405 LYLHEDSRLKIIHRDLKPSNV-LLDKDM---VAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH +I H DLKP N+ LLDK++ K+ DFG+A + N + GT
Sbjct: 143 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTP 196
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE +++D++S GVI ++SG
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 26/210 (12%)
Query: 300 LGQGGFGTVYKGVL-PNGKEVAVK--------RLSRKSWQGLEEFK-NEIILIAKLQ-HR 348
LG+G V + + P KE AVK S + Q L E E+ ++ K+ H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 349 NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
N+++L L+++LM L F + +E+ + L+ I+ + + + LH
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEK-VTLSEKETRKIMRALLEVICALH 128
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
+L I+HRDLKP N+LLD DM K++DFG + C+ R V GT Y+APE
Sbjct: 129 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREVCGTPSYLAPEII 182
Query: 469 MEGL------FSVKSDVFSFGVIVLEIISG 492
+ + + D++S GVI+ +++G
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQGLEEFK----NEIIL 341
IK + F LG+G FG V+ + A+K L + ++ + + +L
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS 401
+H L + C + +E L N + S + L+ T Y I
Sbjct: 73 SLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEII 129
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ-KTANTRRVVGTY 460
GL +LH I++RDLK N+LLDKD KI+DFGM + EN A T GT
Sbjct: 130 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFCGTP 183
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + ++ D +SFGV++ E++ G+
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFI---FDSERRLQLNWNTCYNIIGG 399
N++ L+ E ++ ++ ELM + +L I D ER L Y ++ G
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYL----LYQMLCG 138
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I +LH IIHRDLKPSN+++ D KI DFG+AR TA T ++
Sbjct: 139 IK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTP 184
Query: 460 Y----GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y Y APE + + D++S G I+ E+I G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 299 KLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFK----NEIILIAKLQHRNLVRL 353
K+GQG FG V+K G++VA+K++ ++ + E F EI ++ L+H N+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNL 82
Query: 354 VG-CGIEGEE----KLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
+ C + K IY + D S ++ + ++ + GL Y+H
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR---RVVGTYGYMAP 465
R KI+HRD+K +NVL+ +D V K++DFG+AR F + + R RVV T Y P
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 198
Query: 466 EYAM-EGLFSVKSDVFSFGVIVLEI 489
E + E + D++ G I+ E+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNL 350
D + +LG G FG V++ G A K + E + EI ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
V L + E ++IYE M L + D ++ + Y + + KGL ++HE+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN 274
Query: 411 SRLKIIHRDLKPSNVLL--DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
+ +H DLKP N++ + K+ DFG+ Q T GT + APE A
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVA 328
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+D++S GV+ ++SG
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 275 SSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQGLE 333
+E++ F H +++A +G+G FG V + K++ A+K ++++
Sbjct: 8 ENEDVNFDHFEILRA----------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERN 57
Query: 334 EFKN---EIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNW 390
E +N E+ ++ L+H LV L + E+ ++ +L+ L + ++ +
Sbjct: 58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL---QQNVHFKE 114
Query: 391 NTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC-ENQK 449
T I + L YL +IIHRD+KP N+LLD+ I+DF +A + E Q
Sbjct: 115 ETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI 171
Query: 450 TANTRRVVGTYGYMAPEY--AMEGL-FSVKSDVFSFGVIVLEIISGKR 494
T + GT YMAPE + +G +S D +S GV E++ G+R
Sbjct: 172 TT----MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 299 KLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFK----NEIILIAKLQHRNLVRL 353
K+GQG FG V+K G++VA+K++ ++ + E F EI ++ L+H N+V L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNL 81
Query: 354 VG-CGIEGEE----KLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLH 408
+ C + K IY + D S ++ + ++ + GL Y+H
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 409 EDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTR---RVVGTYGYMAP 465
R KI+HRD+K +NVL+ +D V K++DFG+AR F + + R RVV T Y P
Sbjct: 142 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPP 197
Query: 466 EYAM-EGLFSVKSDVFSFGVIVLEI 489
E + E + D++ G I+ E+
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 12/200 (6%)
Query: 299 KLGQGGFGTVYKGVLPNGKE-VAVKRLS-RKSWQGLEEFK-NEIILIAKLQHRNLVRLVG 355
K+G+G +GTV+K E VA+KR+ +G+ EI L+ +L+H+N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
++ L++E ++ L + FDS L+ + + + KGL + H + +
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 416 IHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG-LFS 474
+HRDLKP N+L++++ K+++FG+AR F + + V T Y P+ L+S
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 475 VKSDVFSFGVIVLEIISGKR 494
D++S G I E+ + R
Sbjct: 181 TSIDMWSAGCIFAELANAGR 200
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 292 DGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNL 350
D + +LG G FG V++ G A K + E + EI ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
V L + E ++IYE M L + D ++ + Y + + KGL ++HE+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN 168
Query: 411 SRLKIIHRDLKPSNVLL--DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
+ +H DLKP N++ + K+ DFG+ Q T GT + APE A
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVA 222
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+D++S GV+ ++SG
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 140
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 141 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y APE + + D++S G I+ E+I G
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 140
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 141 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y APE + + D++S G I+ E+I G
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 141
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 142 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 188
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y APE + + D++S G I+ E+I G
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVGCG 357
LG G F V+ K L GK A+K + + +NEI ++ K++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDS--ERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKI 415
L+ +L+ L FD ER + + +I + + YLHE+ I
Sbjct: 76 ESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDASL-VIQQVLSAVKYLHENG---I 127
Query: 416 IHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
+HRDLKP N+L +++ I+DFG++++ ++ GT GY+APE +
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 473 FSVKSDVFSFGVIVLEIISG 492
+S D +S GVI ++ G
Sbjct: 184 YSKAVDCWSIGVITYILLCG 203
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQH 347
K + + + LG+G FG V++ V + K+ + + + K EI ++ +H
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
RN++ L EE ++I+E + LD F + +LN + + + + L +L
Sbjct: 61 RNILHLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 408 HEDSRLKIIHRDLKPSNVLLD--KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
H + I H D++P N++ + KI +FG AR + + N R + Y AP
Sbjct: 119 HSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFTAPEYYAP 172
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + S +D++S G +V ++SG
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 287 IKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQGLEEFK----NEIIL 341
IK + F LG+G FG V+ + A+K L + ++ + + +L
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS 401
+H L + C + +E L N + S + L+ T Y I
Sbjct: 72 SLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEII 128
Query: 402 KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ-KTANTRRVVGTY 460
GL +LH I++RDLK N+LLDKD KI+DFGM + EN A T GT
Sbjct: 129 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFCGTP 182
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + ++ D +SFGV++ E++ G+
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 33/214 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 142
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV----VG 458
+LH IIHRDLKPSN+++ D KI DFG+AR TA T + V
Sbjct: 143 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMVPFVV 189
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
T Y APE + + D++S G I+ E+I G
Sbjct: 190 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I GL LH R +I++RDLKP N+LLD +ISD G+A E Q VGT
Sbjct: 295 ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGT 348
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
GYMAPE ++ D ++ G ++ E+I+G+
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 300 LGQGGFGTVYK----GVLPNGKEVAVKRLSR----KSWQGLEEFKNEIILIAKLQHRNLV 351
LG+GG+G V++ GK A+K L + ++ + K E ++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
L+ G + LI E + L ER +T + IS L +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
II+RDLKP N++L+ K++DFG+ + + +T GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAPEILMRS 196
Query: 472 LFSVKSDVFSFGVIVLEIISG 492
+ D +S G ++ ++++G
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
GL LH R +I++RDLKP N+LLD +ISD G+A E Q VGT GY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGY 351
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
MAPE ++ D ++ G ++ E+I+G+
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQGLEE---FKNEIILIAKL 345
+D + KLG G +G V K L G E A+K + + S +E+ ++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSL-DCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+++L + L+ E+ L D I R + + I+ + G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSGT 134
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
YLH+ + I+HRDLKP N+LL+ +D + KI DFG++ F + + +GT
Sbjct: 135 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 188
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + + K DV+S GVI+ ++ G
Sbjct: 189 YIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVK-----RLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+G+G F V + + G++ AVK + + E+ K E + L+H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ +++E M L CF + ++ + + + I + L Y H+++
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL-CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 412 RLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
IIHRD+KP NVLL + K+ DFG+A E+ A R VGT +MAPE
Sbjct: 151 ---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPEVV 205
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ DV+ GVI+ ++SG
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSG 229
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G E +I EL L F+ R+ L+ + +S L YL +
Sbjct: 75 GVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G E +I EL L F+ R+ L+ + +S L YL +
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ + K+ DFG++R + E+ + +MAPE F+
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G I +I EL L F+ R+ L+ + +S L YL +
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ K+ DFG++R + E+ + +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 284 LAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGL----------- 332
+A + A ++ + G +G V GV G VA+KR+ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 333 EEFKNEIILIAKLQHRNLVRLVGCGIEGEE----KL-LIYELMPNRSLDCFIFDSERRLQ 387
+ EI L+ H N++ L + EE KL L+ ELM L I D +R+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHD--QRIV 130
Query: 388 LNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN 447
++ + I GL LHE ++HRDL P N+LL + I DF +AR E+
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---ED 184
Query: 448 QKTANTRRVVGTYGYMAPEYAMEGL-FSVKSDVFSFGVIVLEIISGK---RNSGFY 499
AN V Y APE M+ F+ D++S G ++ E+ + K R S FY
Sbjct: 185 TADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQ--GLEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L G+EVA+K + + L++ E+ ++ L H N+V+L
Sbjct: 20 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L LI E + ++ R + + + I + Y H+ +
Sbjct: 79 V-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK---R 131
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G+ Y APE LF
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPE-----LFQ 183
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQG--LEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L GKEVAVK + + L++ E+ ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L L+ E + ++ R + + I + Y H+
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF--- 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G+ Y APE LF
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE-----LFQ 185
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQG--LEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L GKEVAVK + + L++ E+ ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L L+ E + ++ R + + I + Y H+
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF--- 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G+ Y APE LF
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE-----LFQ 185
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 17/216 (7%)
Query: 284 LAVIKAATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLE---EFKNEI 339
+A+ K + LG+G FG V ++VA+K +SR+ + + + EI
Sbjct: 1 MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI 60
Query: 340 ILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYN-IIG 398
+ L+H ++++L + +++ E D +I + +R + + II
Sbjct: 61 SYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQQIIC 119
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
I Y H R KI+HRDLKP N+LLD ++ KI+DFG++ I + + G
Sbjct: 120 AIE----YCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CG 169
Query: 459 TYGYMAPEYAMEGLFS-VKSDVFSFGVIVLEIISGK 493
+ Y APE L++ + DV+S G+++ ++ G+
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 284 LAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGL----------- 332
+A + A ++ + G +G V GV G VA+KR+ G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 333 EEFKNEIILIAKLQHRNLVRLVGCGIEGEE----KL-LIYELMPNRSLDCFIFDSERRLQ 387
+ EI L+ H N++ L + EE KL L+ ELM L I D +R+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHD--QRIV 130
Query: 388 LNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN 447
++ + I GL LHE ++HRDL P N+LL + I DF +AR E+
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---ED 184
Query: 448 QKTANTRRVVGTYGYMAPEYAME-GLFSVKSDVFSFGVIVLEIISGK---RNSGFY 499
AN V Y APE M+ F+ D++S G ++ E+ + K R S FY
Sbjct: 185 TADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 300 LGQGGFGTVYK----GVLPNGKEVAVKRLSR----KSWQGLEEFKNEIILIAKLQHRNLV 351
LG+GG+G V++ GK A+K L + ++ + K E ++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
L+ G + LI E + L ER +T + IS L +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
II+RDLKP N++L+ K++DFG+ + + T GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THXFCGTIEYMAPEILMRS 196
Query: 472 LFSVKSDVFSFGVIVLEIISG 492
+ D +S G ++ ++++G
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLS-RKSWQGLEEFK-NEIILIAKL 345
+ D + KLG+G +G VYK + + VA+KR+ +G+ E+ L+ +L
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
QHRN++ L LI+E N + + +++ + Y +I G++
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN---- 146
Query: 406 YLHEDSRLKIIHRDLKPSNVLL-----DKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
+ H SR + +HRDLKP N+LL + V KI DFG+AR F + T ++ T
Sbjct: 147 FCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF-THEII-TL 201
Query: 461 GYMAPEYAMEGL-FSVKSDVFSFGVIVLEII 490
Y PE + +S D++S I E++
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQ--GLEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + VL G+EVAVK + + L++ E+ ++ L H N+V+L
Sbjct: 23 IGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L L+ E + ++ R + + I + Y H+
Sbjct: 82 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKY--- 134
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G+ Y APE LF
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPE-----LFQ 186
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 291 TDGFSDSNKLGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQGLEE---FKNEIILIAKL 345
+D + KLG G +G V K L G E A+K + + S +E+ ++ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 346 QHRNLVRLVGCGIEGEEKLLIYELMPNRSL-DCFIFDSERRLQLNWNTCYNIIGGISKGL 404
H N+++L + L+ E+ L D I R + + I+ + G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSGT 117
Query: 405 LYLHEDSRLKIIHRDLKPSNVLLD---KDMVAKISDFGMARIFCENQKTANTRRVVGTYG 461
YLH+ + I+HRDLKP N+LL+ +D + KI DFG++ F + + +GT
Sbjct: 118 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 171
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + + K DV+S GVI+ ++ G
Sbjct: 172 YIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 393 CYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKT-- 450
C +I I++ + +LH ++HRDLKPSN+ D V K+ DFG+ ++++
Sbjct: 166 CLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 451 --------ANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
A VGT YM+PE +S K D+FS G+I+ E++
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 300 LGQGGFGTVYKGVLP-NGKEVAVKRLSRKSWQ-GLEEFKNEIILIAKLQHRNLVRLVGCG 357
+G+GGFG V++ + A+KR+ + + E+ E+ +AKL+H +VR
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 358 IE 359
+E
Sbjct: 74 LE 75
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQ--GLEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L G+EVA+K + + L++ E+ ++ L H N+V+L
Sbjct: 23 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L LI E + ++ R + + + I + Y H+ +
Sbjct: 82 V-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK---R 134
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G Y APE LF
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPE-----LFQ 186
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRK---SWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
+G+G +G V++G L +G+ VAVK S + SW E N ++L +H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIAS 70
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED-----S 411
+ L+ + ++D +R L + + + GL +LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ---KTANTRRVVGTYGYMAPEYA 468
+ I HRD K NVL+ ++ I+D G+A + + N R VGT YMAPE
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR-VGTKRYMAPEVL 189
Query: 469 MEGLFS------VKSDVFSFGVIVLEI 489
E + + +D+++FG+++ EI
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 300 LGQGGFGTVYKGVL--PNGKEVAVKRLSRKSWQG---LEEFKNEIILIAKLQHRNLVRLV 354
+G+G FG V++G+ P +AV + K+ E+F E + + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
G E +I EL L F+ R+ L+ + +S L YL +
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
+HRD+ NVL+ K+ DFG++R + E+ + +MAPE F+
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 475 VKSDVFSFGVIVLEII 490
SDV+ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 299 KLGQGGFGTVYKGV-LPNGKEVAVKRLS---RKSWQGLEEFKNEIILIAKLQHRNLVRLV 354
KLG+G +G V+K + G+ VAVK++ + S F+ +IL H N+V L+
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 355 GC--GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSR 412
+ L+++ M L I + Y +I K + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLI----KVIKYLHSGG- 129
Query: 413 LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT------------------- 453
++HRD+KPSN+LL+ + K++DFG++R F ++ N
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 454 RRVVGTYGYMAPEYAMEGLFSVKS-DVFSFGVIVLEIISGK 493
V T Y APE + K D++S G I+ EI+ GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQG--LEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L GKEVAV+ + + L++ E+ ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L L+ E + ++ R + + I + Y H+
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF--- 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G+ Y APE LF
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE---FCGSPPYAAPE-----LFQ 185
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQG--LEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L GKEVAV+ + + L++ E+ ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L L+ E + ++ R + + I + Y H+
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF--- 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G+ Y APE LF
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE-----LFQ 185
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 134
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 135 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 181
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 182 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 140
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV----VG 458
+LH IIHRDLKPSN+++ D KI DFG+AR TA T + V
Sbjct: 141 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMEPEVV 187
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
T Y APE + + D++S G I+ E++ K
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 145
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY-- 460
+LH IIHRDLKPSN+++ D KI DFG+AR TA T ++ Y
Sbjct: 146 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 192
Query: 461 --GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y APE + + D++S G I+ E++ K
Sbjct: 193 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQG--LEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L GKEVAVK + + L++ E+ ++ L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L L+ E + ++ R + + I + Y H+
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF--- 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD DM KI+DFG + F K G Y APE LF
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPE-----LFQ 185
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
+ D LG GG G V+ V + K VA+K++ Q ++ EI +I +L H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 353 L--------------VGCGIEGEEKLLIYELMPNRSLDCF----IFDSERRLQLNWNTCY 394
+ VG E ++ E M + + + RL + Y
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFM-----Y 127
Query: 395 NIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLD-KDMVAKISDFGMARIFCEN-QKTAN 452
++ +GL Y+H + ++HRDLKP+N+ ++ +D+V KI DFG+ARI + +
Sbjct: 128 QLL----RGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVKS-DVFSFGVIVLEIISGK 493
+ T Y +P + K+ D+++ G I E+++GK
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 25/202 (12%)
Query: 299 KLGQGGFGTVYKGVLPNGK------EVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVR 352
++G+G F TVYKG+ E+ ++L++ Q FK E + LQH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIVR 89
Query: 353 LVG---CGIEGEE-KLLIYELMPNRSLDCFIFDSE-RRLQLNWNTCYNIIGGISKGLLYL 407
++G++ +L+ EL + +L ++ + ++++ + C I+ KGL +L
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL----KGLQFL 145
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
H + IIHRDLK N+ + KI D G+A + ++ + + V+GT + APE
Sbjct: 146 HTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPE 200
Query: 467 YAMEGLFSVKSDVFSFGVIVLE 488
E + DV++FG LE
Sbjct: 201 -XYEEKYDESVDVYAFGXCXLE 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 13/210 (6%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQGLEEFK----NEIILI 342
+ D F LG+G FG V V G AVK L + ++ + + IL
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 343 AKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
H L +L C + + E + L F RR Y I
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL-MFHIQKSRRFDEARARFY--AAEIIS 135
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
L++LH+ II+RDLK NVLLD + K++DFGM + N T T GT Y
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT--FCGTPDY 190
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+APE E L+ D ++ GV++ E++ G
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 294 FSDSNKLGQGGFGTV---YKGVLPNGKEVAVKRLSR--KSWQGLEEFKNEIILIAKLQHR 348
+ + +G G G V Y +L + VA+K+LSR ++ + E++L+ + H+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 349 NLVRLVGCGI------EGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
N++ L+ E ++ ++ ELM + +L C + E + Y ++ GI
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQMELDHERMSYLLYQMLCGIK- 140
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRV----VG 458
+LH IIHRDLKPSN+++ D KI DFG+AR TA T + V
Sbjct: 141 ---HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMEPEVV 187
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
T Y APE + + D++S G I+ E++ K
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQG--LEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L GKEVAVK + + L++ E+ ++ L H N+V+L
Sbjct: 15 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 356 CGIEGEEKLLIYELMPNRS----LDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
IE E+ L Y +M S D + + + I+ + Y H+
Sbjct: 74 V-IETEKTL--YLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ----YCHQKF 126
Query: 412 RLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEG 471
I+HRDLK N+LLD DM KI+DFG + F K G+ Y APE
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE----- 175
Query: 472 LFSVKS------DVFSFGVIVLEIISG 492
LF K DV+S GVI+ ++SG
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKN-EIILIAKLQHRNLVRLVG 355
+G+G FG V++G G+EVAVK S +SW F+ EI L+H N++ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-----FREAEIYQTVMLRHENILGFIA 103
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED----- 410
+ L+ + +FD R + + + GL +LH +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT--RRVVGTYGYMAPEYA 468
+ I HRDLK N+L+ K+ I+D G+A T + VGT YMAPE
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 469 -----MEGLFSVK-SDVFSFGVIVLEI 489
M+ S K +D+++ G++ EI
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKN-EIILIAKLQHRNLVRLVG 355
+G+G FG V++G G+EVAVK S +SW F+ EI L+H N++ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-----FREAEIYQTVMLRHENILGFIA 90
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED----- 410
+ L+ + +FD R + + + GL +LH +
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT--RRVVGTYGYMAPEYA 468
+ I HRDLK N+L+ K+ I+D G+A T + VGT YMAPE
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 469 -----MEGLFSVK-SDVFSFGVIVLEI 489
M+ S K +D+++ G++ EI
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKN-EIILIAKLQHRNLVRLVG 355
+G+G FG V++G G+EVAVK S +SW F+ EI L+H N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-----FREAEIYQTVMLRHENILGFIA 65
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED----- 410
+ L+ + +FD R + + + GL +LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT--RRVVGTYGYMAPEY- 467
+ I HRDLK N+L+ K+ I+D G+A T + VGT YMAPE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 468 ----AMEGLFSVK-SDVFSFGVIVLEI 489
M+ S K +D+++ G++ EI
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 40/261 (15%)
Query: 258 ELAGPISVSLTQEGDLVSSEELPFVHLAVIKAAT--------DGFSDSNKLGQGGFGTVY 309
E GP+ V+++ +LA++KA + D + +G G +G V
Sbjct: 18 EPPGPVKAEPAHTAASVAAK-----NLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVS 72
Query: 310 KGVLP-NGKEVAVKRLSR------------KSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
G++VA+K++ + + L+ FK++ I+ K +++R
Sbjct: 73 SARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK----DILRPTVP 128
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
E + ++ +LM L I S+ L + + +GL Y+H ++I
Sbjct: 129 YGEFKSVYVVLDLM-ESDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHS---AQVI 181
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN--TRRVVGTYGYMAPEYAME-GLF 473
HRDLKPSN+L++++ KI DFGMAR C + V T Y APE + +
Sbjct: 182 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY 241
Query: 474 SVKSDVFSFGVIVLEIISGKR 494
+ D++S G I E+++ ++
Sbjct: 242 TQAIDLWSVGCIFGEMLARRQ 262
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKN-EIILIAKLQHRNLVRLVG 355
+G+G FG V++G G+EVAVK S +SW F+ EI L+H N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-----FREAEIYQTVMLRHENILGFIA 64
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED----- 410
+ L+ + +FD R + + + GL +LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT--RRVVGTYGYMAPEYA 468
+ I HRDLK N+L+ K+ I+D G+A T + VGT YMAPE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 469 -----MEGLFSVK-SDVFSFGVIVLEI 489
M+ S K +D+++ G++ EI
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKN-EIILIAKLQHRNLVRLVG 355
+G+G FG V++G G+EVAVK S +SW F+ EI L+H N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-----FREAEIYQTVMLRHENILGFIA 70
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED----- 410
+ L+ + +FD R + + + GL +LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT--RRVVGTYGYMAPEY- 467
+ I HRDLK N+L+ K+ I+D G+A T + VGT YMAPE
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 468 ----AMEGLFSVK-SDVFSFGVIVLEI 489
M+ S K +D+++ G++ EI
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLS---RKSWQGLEEFKN-EIILIAKLQHRNLVRLVG 355
+G+G FG V++G G+EVAVK S +SW F+ EI L+H N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW-----FREAEIYQTVMLRHENILGFIA 67
Query: 356 CGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED----- 410
+ L+ + +FD R + + + GL +LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANT--RRVVGTYGYMAPEY- 467
+ I HRDLK N+L+ K+ I+D G+A T + VGT YMAPE
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 468 ----AMEGLFSVK-SDVFSFGVIVLEI 489
M+ S K +D+++ G++ EI
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
IS GL +LH + II+RDLK NV+LD + KI+DFGM + + T TR GT
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT--TREFCGT 183
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + D +++GV++ E+++G+
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F +G G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E MP + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ K++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F +G G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E MP + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ K++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 40/261 (15%)
Query: 258 ELAGPISVSLTQEGDLVSSEELPFVHLAVIKAAT--------DGFSDSNKLGQGGFGTVY 309
E GP+ V+++ +LA++KA + D + +G G +G V
Sbjct: 17 EPPGPVKAEPAHTAASVAAK-----NLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVS 71
Query: 310 KGVLP-NGKEVAVKRL------------SRKSWQGLEEFKNEIILIAKLQHRNLVRLVGC 356
G++VA+K++ + + + L+ FK++ I+ K +++R
Sbjct: 72 SARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK----DILRPTVP 127
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
E + ++ +LM L I S+ L + + +GL Y+H ++I
Sbjct: 128 YGEFKSVYVVLDLM-ESDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHS---AQVI 180
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTAN--TRRVVGTYGYMAPEYAME-GLF 473
HRDLKPSN+L++++ KI DFGMAR C + V T Y APE + +
Sbjct: 181 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY 240
Query: 474 SVKSDVFSFGVIVLEIISGKR 494
+ D++S G I E+++ ++
Sbjct: 241 TQAIDLWSVGCIFGEMLARRQ 261
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 22/237 (9%)
Query: 285 AVIKAATDGFSDSNKLGQGGFGT-VYKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIA 343
+V+ F + LG G GT VY+G+ N ++VAVKR+ + + + + +L
Sbjct: 17 SVVIVGKISFCPKDVLGHGAEGTIVYRGMFDN-RDVAVKRILPECFSFAD--REVQLLRE 73
Query: 344 KLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSE-RRLQLNWNTCYNIIGGISK 402
+H N++R + + + + EL +L ++ + L L T ++ +
Sbjct: 74 SDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPIT---LLQQTTS 129
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDK-----DMVAKISDFGMARIFCENQKTANTRR-V 456
GL +LH L I+HRDLKP N+L+ + A ISDFG+ + + + + R V
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 457 VGTYGYMAPEYAMEGLF---SVKSDVFSFGVIVLEIIS-GKRNSGFYLTGHAQTLLA 509
GT G++APE E + D+FS G + +IS G G L A LL
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG 243
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 297 SNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQ-HRNLVRLV 354
S LG+G + V V L NGKE AVK + +++ E+ + + Q ++N++ L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
+ L++E + S+ I +++ N ++ ++ L +LH
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTKG--- 131
Query: 415 IIHRDLKPSNVLL---DKDMVAKISDFGMARIF-----CENQKTANTRRVVGTYGYMAPE 466
I HRDLKP N+L +K KI DF + C T G+ YMAPE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 467 YA-----MEGLFSVKSDVFSFGVIVLEIISG 492
+ + D++S GV++ ++SG
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L+E + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ K++DFG+A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I K L YL E + +IHRD+KPSN+LLD+ K+ DFG++ +++ R G
Sbjct: 133 IVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGC 187
Query: 460 YGYMAPEY-----AMEGLFSVKSDVFSFGVIVLEIISGK 493
YMAPE + + +++DV+S G+ ++E+ +G+
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 293 GFSDSNKLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFKN-EIILIAKLQHRNLV 351
+++ +G G FG V++ L EVA+K++ + + FKN E+ ++ ++H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVV 95
Query: 352 RLVGC----GIEGEEKL--LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL 405
L G + +E L+ E +P ++ + + + + + L
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDM-VAKISDFGMARIFCENQKTANTRRVVGTYGYMA 464
Y+H + I HRD+KP N+LLD V K+ DFG A+I + N + Y Y A
Sbjct: 156 YIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY-YRA 209
Query: 465 PEYAMEGL-FSVKSDVFSFGVIVLEIISGK 493
PE ++ D++S G ++ E++ G+
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 25/172 (14%)
Query: 285 AVIK--AATDGFSDSNKLGQGGFGTVYKGVLPNG-KEVAVKRLSRKSWQGLEEFKN---E 338
A+IK D + + +G+G +G VY N K VA+K+++R ++ L + K E
Sbjct: 19 AIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR-MFEDLIDCKRILRE 77
Query: 339 IILIAKLQHRNLVRLVGCGI-----EGEEKLLIYELMPNRSLDCF---IFDSERRLQLNW 390
I ++ +L+ ++RL I + +E ++ E+ + F IF +E+ ++
Sbjct: 78 ITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVK--- 134
Query: 391 NTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMAR 442
YN++ G ++HE IIHRDLKP+N LL++D KI DFG+AR
Sbjct: 135 TILYNLLLGEK----FIHESG---IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 300 LGQGGFGTVY--KGVLPNGKEVAVKRLSRKSWQG--LEEFKNEIILIAKLQHRNLVRLVG 355
+G+G F V + +L GKEVAVK + + L++ E+ + L H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
IE E+ L L+ E + ++ R + + I + Y H+
Sbjct: 81 V-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQKF--- 133
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFS 474
I+HRDLK N+LLD D KI+DFG + F K G Y APE LF
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPE-----LFQ 185
Query: 475 VKS------DVFSFGVIVLEIISG 492
K DV+S GVI+ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 331 GLEEFKNEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCF-----IFDSERR 385
G K EI L+ +L+H+N+++LV + EEK +Y +M C + DS
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDV-LYNEEKQKMYMVMEY----CVCGMQEMLDSVPE 103
Query: 386 LQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFC 445
+ + + GL YLH I+H+D+KP N+LL KIS G+A
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 446 ENQKTANTRRVVGTYGYMAPEYA--MEGLFSVKSDVFSFGVIVLEIISG 492
R G+ + PE A ++ K D++S GV + I +G
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 27/266 (10%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRLVGCG 357
+G GGF V + G+ VA+K + + + L K EI + L+H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 358 IEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIH 417
+ ++ E P L +I +R L+ + I + Y+H H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAYVHSQG---YAH 131
Query: 418 RDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM-EGLFSVK 476
RDLKP N+L D+ K+ DFG+ + K + + G+ Y APE + +
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 477 SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQ 536
+DV+S G+++ ++ G +L ++A L+K+ ++ P + SSI
Sbjct: 191 ADVWSMGILLYVLMCG------FLPFDDDNVMA----LYKKIMRGKYDVPKWLSPSSILL 240
Query: 537 VVRCIHIGLLCVQEDPAVRPTMSNVV 562
+ + + Q DP R +M N++
Sbjct: 241 LQQML-------QVDPKKRISMKNLL 259
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRN 349
D +LG+G +G V K +P+G+ AVKR+ R + E+ ++ + R
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRI-RATVNSQEQ--KRLLXDLDISXRT 89
Query: 350 L-----VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGIS--- 401
+ V G + + EL + SLD F ++ + +I+G I+
Sbjct: 90 VDCPFTVTFYGALFREGDVWICXELX-DTSLDKFY---KQVIDKGQTIPEDILGKIAVSI 145
Query: 402 -KGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
K L +LH S+L +IHRD+KPSNVL++ K DFG++ ++ G
Sbjct: 146 VKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKDIDAGCK 200
Query: 461 GYMAPEYAMEGL----FSVKSDVFSFGVIVLEI 489
Y APE L +SVKSD++S G+ +E+
Sbjct: 201 PYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L+E + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ +++DFG+A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN- 349
+S ++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 350 -LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YL 407
++RL I + IY +M ++D + +++ W K +L +
Sbjct: 73 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAV 124
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H + I+H DLKP+N L+ M+ K+ DFG+A + + VGT YM PE
Sbjct: 125 HTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE- 182
Query: 468 AMEGLFSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQ 513
A++ + S + DV+S G I+ + GK T Q + ++ +
Sbjct: 183 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHA 235
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
+ E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 236 IIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 276
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEF--KNEIILIAKLQHRNLVRLVGC 356
+LG G FG V++ V V V + + L+++ KNEI ++ +L H L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFD--SERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
+ E +LI E + L FD + +++ N + +GL ++HE S
Sbjct: 117 FEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 415 IIHRDLKPSNVLLD--KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
I+H D+KP N++ + K KI DFG+A ++ T T + APE
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT---TATAEFAAPEIVDREP 226
Query: 473 FSVKSDVFSFGVIVLEIISG 492
+D+++ GV+ ++SG
Sbjct: 227 VGFYTDMWAIGVLGYVLLSG 246
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 42/315 (13%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYK----GVLPN--GKEVAVKRLSRK 327
+ +LP+ H + + S LG G FG V + G++ + VAVK L
Sbjct: 7 IDPTQLPYDH--KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS 64
Query: 328 S-WQGLEEFKNEIILIAKL-QHRNLVRLVGCGIEGEEKLLIYEL--------MPNRSLDC 377
+ E +E+ +++ L H N+V L+G G L+I E R D
Sbjct: 65 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 124
Query: 378 FIFDSERRLQLNWNTCYNIIGG-------ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKD 430
FI + + + ++KG+ +L + IHRDL N+LL
Sbjct: 125 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHG 181
Query: 431 MVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
+ KI DFG+AR + +MAPE +++ +SDV+S+G+ + E+
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
Query: 491 SGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQE 550
S S Y + + +++ KEG M + P I C
Sbjct: 242 S--LGSSPY---PGMPVDSKFYKMIKEGFRM-------LSPEHAP--AEMYDIMKTCWDA 287
Query: 551 DPAVRPTMSNVVALL 565
DP RPT +V L+
Sbjct: 288 DPLKRPTFKQIVQLI 302
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 24 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + + I
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 139
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 140 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYL 191
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 292 DGFSDSNKLGQGGFGTVYKGVLPNG-KEVAVKRLSRKSWQGLEEFKN---EIILIAKLQH 347
D + + +G+G +G VY N K VA+K+++R ++ L + K EI ++ +L+
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-MFEDLIDCKRILREITILNRLKS 84
Query: 348 RNLVRLVGCGIEGE-----EKLLIYELMPNRSLDCF---IFDSERRLQLNWNTCYNIIGG 399
++RL I + E ++ E+ + F IF +E ++ YN++ G
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK---TILYNLLLG 141
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIF--------------- 444
+ ++HE IIHRDLKP+N LL++D K+ DFG+AR
Sbjct: 142 EN----FIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 445 ------CENQKTANTRRVVGTYGYMAPEYAMEGLFSVKS-DVFSFGVIVLEIIS 491
+N K T VV T Y APE + KS D++S G I E+++
Sbjct: 195 EEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F +G G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ K++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN- 349
+S ++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 350 -LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YL 407
++RL I + IY +M ++D + +++ W K +L +
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAV 168
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H + I+H DLKP+N L+ M+ K+ DFG+A + + VGT YM PE
Sbjct: 169 HTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE- 226
Query: 468 AMEGLFSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQ 513
A++ + S + DV+S G I+ + GK T Q + ++ +
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHA 279
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
+ E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 280 IIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 320
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 42/315 (13%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYK----GVLPN--GKEVAVKRLSRK 327
+ +LP+ H + + S LG G FG V + G++ + VAVK L
Sbjct: 30 IDPTQLPYDH--KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS 87
Query: 328 S-WQGLEEFKNEIILIAKL-QHRNLVRLVGCGIEGEEKLLIYEL--------MPNRSLDC 377
+ E +E+ +++ L H N+V L+G G L+I E R D
Sbjct: 88 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 147
Query: 378 FIFDSERRLQLNWNTCYNIIGG-------ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKD 430
FI + + + ++KG+ +L + IHRDL N+LL
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHG 204
Query: 431 MVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
+ KI DFG+AR + +MAPE +++ +SDV+S+G+ + E+
Sbjct: 205 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 491 SGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQE 550
S S Y + + +++ KEG M + P I C
Sbjct: 265 S--LGSSPY---PGMPVDSKFYKMIKEGFRM-------LSPEHAP--AEMYDIMKTCWDA 310
Query: 551 DPAVRPTMSNVVALL 565
DP RPT +V L+
Sbjct: 311 DPLKRPTFKQIVQLI 325
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 206
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYL 206
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 42/315 (13%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYK----GVLPN--GKEVAVKRLSRK 327
+ +LP+ H + + S LG G FG V + G++ + VAVK L
Sbjct: 30 IDPTQLPYDH--KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS 87
Query: 328 S-WQGLEEFKNEIILIAKL-QHRNLVRLVGCGIEGEEKLLIYEL--------MPNRSLDC 377
+ E +E+ +++ L H N+V L+G G L+I E R D
Sbjct: 88 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 147
Query: 378 FIFDSERRLQLNWNTCYNIIGG-------ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKD 430
FI + + + ++KG+ +L + IHRDL N+LL
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHG 204
Query: 431 MVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
+ KI DFG+AR + +MAPE +++ +SDV+S+G+ + E+
Sbjct: 205 RITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 491 SGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQE 550
S S Y + + +++ KEG M + P I C
Sbjct: 265 S--LGSSPY---PGMPVDSKFYKMIKEGFRM-------LSPEHAP--AEMYDIMKTCWDA 310
Query: 551 DPAVRPTMSNVVALL 565
DP RPT +V L+
Sbjct: 311 DPLKRPTFKQIVQLI 325
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN- 349
+S ++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 350 -LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YL 407
++RL I + IY +M ++D + +++ W K +L +
Sbjct: 89 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAV 140
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H + I+H DLKP+N L+ M+ K+ DFG+A + + VGT YM PE
Sbjct: 141 HTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE- 198
Query: 468 AMEGLFSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQ 513
A++ + S + DV+S G I+ + GK T Q + ++ +
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHA 251
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
+ E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 252 IIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 292
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN- 349
+S ++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 350 -LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YL 407
++RL I + IY +M ++D + +++ W K +L +
Sbjct: 69 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAV 120
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H + I+H DLKP+N L+ M+ K+ DFG+A + + VGT YM PE
Sbjct: 121 HTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE- 178
Query: 468 AMEGLFSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQ 513
A++ + S + DV+S G I+ + GK T Q + ++ +
Sbjct: 179 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHA 231
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
+ E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 232 IIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 272
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 42/315 (13%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYK----GVLPN--GKEVAVKRLSRK 327
+ +LP+ H + + S LG G FG V + G++ + VAVK L
Sbjct: 25 IDPTQLPYDH--KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS 82
Query: 328 S-WQGLEEFKNEIILIAKL-QHRNLVRLVGCGIEGEEKLLIYEL--------MPNRSLDC 377
+ E +E+ +++ L H N+V L+G G L+I E R D
Sbjct: 83 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 142
Query: 378 FIFDSERRLQLNWNTCYNIIGG-------ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKD 430
FI + + + ++KG+ +L + IHRDL N+LL
Sbjct: 143 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHG 199
Query: 431 MVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
+ KI DFG+AR + +MAPE +++ +SDV+S+G+ + E+
Sbjct: 200 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
Query: 491 SGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQE 550
S S Y + + +++ KEG M + P I C
Sbjct: 260 S--LGSSPY---PGMPVDSKFYKMIKEGFRM-------LSPEHAP--AEMYDIMKTCWDA 305
Query: 551 DPAVRPTMSNVVALL 565
DP RPT +V L+
Sbjct: 306 DPLKRPTFKQIVQLI 320
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ K++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 299 KLGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQHRNLVRLVGCG 357
K+G+G +G VYK +GK+ L + G+ EI L+ +L+H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 358 IEGEEK--LLIYELMPNRSLDCFIFD-----SERRLQLNWNTCYNIIGGISKGLLYLHED 410
+ ++ L+++ + F +++ +QL +++ I G+ YLH +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 411 SRLKIIHRDLKPSNVLL----DKDMVAKISDFGMARIFCENQKT-ANTRRVVGTYGYMAP 465
++HRDLKP+N+L+ + KI+D G AR+F K A+ VV T+ Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 466 EYAMEGLFSVKS-DVFSFGVIVLEIISGK 493
E + K+ D+++ G I E+++ +
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 379 IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDF 438
+F +R+ +L IS L YLHE II+RDLK NVLLD + K++D+
Sbjct: 141 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 197
Query: 439 GMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGF 498
GM + T +T GT Y+APE + D ++ GV++ E+++G+ S F
Sbjct: 198 GMCKEGLRPGDTTST--FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR--SPF 253
Query: 499 YLTGHA----QTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
+ G + Q Y++Q+ E K++ L +K++S+
Sbjct: 254 DIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKAASV 292
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 42/315 (13%)
Query: 274 VSSEELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYK----GVLPN--GKEVAVKRLSRK 327
+ +LP+ H + + S LG G FG V + G++ + VAVK L
Sbjct: 23 IDPTQLPYDH--KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS 80
Query: 328 S-WQGLEEFKNEIILIAKL-QHRNLVRLVGCGIEGEEKLLIYEL--------MPNRSLDC 377
+ E +E+ +++ L H N+V L+G G L+I E R D
Sbjct: 81 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 140
Query: 378 FIFDSERRLQLNWNTCYNIIGG-------ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKD 430
FI + + + ++KG+ +L + IHRDL N+LL
Sbjct: 141 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHG 197
Query: 431 MVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEII 490
+ KI DFG+AR + +MAPE +++ +SDV+S+G+ + E+
Sbjct: 198 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
Query: 491 SGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQE 550
S S Y + + +++ KEG M + P I C
Sbjct: 258 S--LGSSPY---PGMPVDSKFYKMIKEGFRM-------LSPEHAP--AEMYDIMKTCWDA 303
Query: 551 DPAVRPTMSNVVALL 565
DP RPT +V L+
Sbjct: 304 DPLKRPTFKQIVQLI 318
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 286 VIKAATDGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLS--RKSWQGLEEFKNEIILI 342
++ + F + LG+G +G V P G+ VA+K++ K L + EI ++
Sbjct: 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKIL 63
Query: 343 AKLQHRNLVRLVGCGIEGE-----EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
+H N++ + E +I ELM D R + + +I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQ 115
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--------K 449
I + L + +IHRDLKPSN+L++ + K+ DFG+ARI E+ +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 450 TANTRRVVGTYGYMAPEYAM-EGLFSVKSDVFSFGVIVLEI 489
+ V T Y APE + +S DV+S G I+ E+
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 286 VIKAATDGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLS--RKSWQGLEEFKNEIILI 342
++ + F + LG+G +G V P G+ VA+K++ K L + EI ++
Sbjct: 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKIL 63
Query: 343 AKLQHRNLVRLVGCGIEGE-----EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
+H N++ + E +I ELM D R + + +I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQ 115
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--------K 449
I + L + +IHRDLKPSN+L++ + K+ DFG+ARI E+ +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 450 TANTRRVVGTYGYMAPEYAM-EGLFSVKSDVFSFGVIVLEI 489
+ V T Y APE + +S DV+S G I+ E+
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN- 349
+S ++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 350 -LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YL 407
++RL I + IY +M ++D + +++ W K +L +
Sbjct: 70 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAV 121
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H + I+H DLKP+N L+ M+ K+ DFG+A + + VGT YM PE
Sbjct: 122 HTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE- 179
Query: 468 AMEGLFSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQ 513
A++ + S + DV+S G I+ + GK T Q + ++ +
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHA 232
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
+ E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 233 IIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 273
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 47/285 (16%)
Query: 299 KLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN--LVRL 353
++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ + ++RL
Sbjct: 63 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YLHEDSR 412
I + IY +M ++D + +++ W K +L +H +
Sbjct: 122 YDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAVHTIHQ 173
Query: 413 LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
I+H DLKP+N L+ M+ K+ DFG+A + + VGT YM PE A++ +
Sbjct: 174 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDM 231
Query: 473 FSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQLWKEG 518
S + DV+S G I+ + GK T Q + ++ + +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHAIIDPN 284
Query: 519 KEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 285 HEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 320
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 292 DGFSDSNKLGQGGFGTVYK-GVLPNGKEVAVKR-LSRKSWQGLEEFK-NEIILIAKLQHR 348
+ + K+G+G +G V+K G+ VA+K+ L + +++ EI ++ +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 349 NLVRLVGCGIEGEEKLLIYELMPN---RSLDCFIFDSERRL--QLNWNTCYNIIGGISKG 403
NLV L+ L++E + LD + L + W T +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTL--------QA 114
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
+ + H+ + IHRD+KP N+L+ K V K+ DFG AR+ + V T Y
Sbjct: 115 VNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYR 169
Query: 464 APEYAM-EGLFSVKSDVFSFGVIVLEIISG 492
+PE + + + DV++ G + E++SG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 206
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E P + F RR+ + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ K++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E +P + F RR+ + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 286 VIKAATDGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLS--RKSWQGLEEFKNEIILI 342
++ + F + LG+G +G V P G+ VA+K++ K L + EI ++
Sbjct: 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKIL 63
Query: 343 AKLQHRNLVRLVGCGIEGE-----EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
+H N++ + E +I ELM D R + + +I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQ 115
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQ--------K 449
I + L + +IHRDLKPSN+L++ + K+ DFG+ARI E+ +
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 450 TANTRRVVGTYGYMAPEYAM-EGLFSVKSDVFSFGVIVLEI 489
+ V T Y APE + +S DV+S G I+ E+
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 300 LGQGGFGTVYKG-VLPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKL----QHR 348
LG+GGFGTV+ G L + +VA+K + R G + E+ L+ K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 349 NLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSER-RLQLNWNTCYNIIGGISKGLLYL 407
++RL+ E +E ++ P + D F + +E+ L + C+ G + + +
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCF--FGQVVAAIQHC 155
Query: 408 HEDSRLKIIHRDLKPSNVLLD-KDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
H ++HRD+K N+L+D + AK+ DFG + + T GT Y PE
Sbjct: 156 HSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----GTRVYSPPE 208
Query: 467 Y-AMEGLFSVKSDVFSFGVIVLEIISG 492
+ + ++ + V+S G+++ +++ G
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVK-----RLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+G+G F V + + G++ AVK + + E+ K E + L+H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ +++E M L CF + ++ + + + I + L Y H+++
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL-CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 412 RLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
IIHRD+KP VLL + K+ FG+A E+ A R VGT +MAPE
Sbjct: 151 ---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVV 205
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ DV+ GVI+ ++SG
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSG 229
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 47/290 (16%)
Query: 294 FSDSNKLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN- 349
+S ++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 350 -LVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YL 407
++RL I + IY +M ++D + +++ W K +L +
Sbjct: 89 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAV 140
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H + I+H DLKP+N L+ M+ K+ DFG+A + VGT YM PE
Sbjct: 141 HTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE- 198
Query: 468 AMEGLFSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQ 513
A++ + S + DV+S G I+ + GK T Q + ++ +
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHA 251
Query: 514 LWKEGKEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
+ E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 252 IIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 292
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVK-----RLSRKSWQGLEEFKNEIILIAKLQHRNLVRL 353
+G+G F V + + G++ AVK + + E+ K E + L+H ++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCF--IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
+ +++E M L CF + ++ + + + I + L Y H+++
Sbjct: 94 LETYSSDGMLYMVFEFMDGADL-CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 412 RLKIIHRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
IIHRD+KP VLL + K+ FG+A E+ A R VGT +MAPE
Sbjct: 153 ---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVV 207
Query: 469 MEGLFSVKSDVFSFGVIVLEIISG 492
+ DV+ GVI+ ++SG
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSG 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 31 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 143
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 144 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 195
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 37/210 (17%)
Query: 300 LGQGGFGTVYKGVLPNGKEV--AVKRLSRKSWQGLEEFKNEI----ILIAKLQHRNLVRL 353
+G+G FG V +EV AVK L +K+ +E K+ + +L+ ++H LV L
Sbjct: 46 IGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 354 VGCGIEGEEKL-----------LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISK 402
+ +KL L Y L R CF+ E R + I+
Sbjct: 105 -HFSFQTADKLYFVLDYINGGELFYHLQRER---CFL---EPRARF-------YAAEIAS 150
Query: 403 GLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGY 462
L YLH L I++RDLKP N+LLD ++DFG+ + E+ T +T GT Y
Sbjct: 151 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST--FCGTPEY 205
Query: 463 MAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
+APE + + D + G ++ E++ G
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQ-HRNLVRLVGCG 357
L +GGF VY+ + +G+E A+KRL + E+ + KL H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 358 IEGEEK--------LLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHE 409
G+E+ LL+ EL + ++ F+ E R L+ +T I + + ++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVE-FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 410 DSRLKIIHRDLKPSNVLLDKDMVAKISDFGMA---------------RIFCENQKTANTR 454
+ IIHRDLK N+LL K+ DFG A R E + T NT
Sbjct: 155 Q-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT- 212
Query: 455 RVVGTYGYMAPEYA-MEGLFSV--KSDVFSFGVIV 486
T Y PE + F + K D+++ G I+
Sbjct: 213 ----TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 39 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 39 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ LV+L + ++ E P + F RR+ + + I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ +++DFG A+ + T + GT Y+
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 205
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 39 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E P + F RR+ + + I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+++D+ K++DFG A+ + T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 38 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 39 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 38 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 132/323 (40%), Gaps = 54/323 (16%)
Query: 278 ELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKE-VAVKRLSRKSWQGLEEFK 336
++P +H +D + +G G FG KE VAVK + R + E +
Sbjct: 12 DMPIMH------DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQ 64
Query: 337 NEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
EII L+H N+VR + +I E L I ++ R + +
Sbjct: 65 REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR---FSEDEARFF 121
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVA--KISDFGMARIFCENQKTANTR 454
+ G+ Y H ++I HRDLK N LLD KI DFG ++ + + +T
Sbjct: 122 FQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 177
Query: 455 RVVGTYGYMAPEYAMEGLFSVK-SDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQ 513
VGT Y+APE + + K +DV+S GV + ++ G AY ++
Sbjct: 178 --VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG----------------AYPFE 219
Query: 514 LWKEGKEM-EFVDPLLMKSSSIPQVVR----CIHIGLLCVQEDPAVRPT----------M 558
+E ++ + + +L SIP +R C H+ DPA R + +
Sbjct: 220 DPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFL 279
Query: 559 SNVVALLGSES---IALSEPRQP 578
N+ A L +ES EP QP
Sbjct: 280 KNLPADLMNESNTGSQFQEPEQP 302
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 43/228 (18%)
Query: 300 LGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKL-----QHRNLVRL 353
LG G GTV ++G G+ VAVKR+ L +F + ++ KL H N++R
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFI-----FDSERRLQLNWNTCYNIIGGISKGLLYLH 408
C + L I + N +L + D +LQ +N +++ I+ G+ +LH
Sbjct: 93 Y-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH 150
Query: 409 EDSRLKIIHRDLKPSNVLL--------DKDMVAK-----ISDFGMARIFCENQKT--ANT 453
LKIIHRDLKP N+L+ D+ A+ ISDFG+ + Q N
Sbjct: 151 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 454 RRVVGTYGYMAPEYAMEGL---FSVKSDVFSFGVIVLEIIS-GKRNSG 497
GT G+ APE E + D+FS G + I+S GK G
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 59 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 171
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 172 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 223
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 38 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + + I
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 43/228 (18%)
Query: 300 LGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKL-----QHRNLVRL 353
LG G GTV ++G G+ VAVKR+ L +F + ++ KL H N++R
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFI-----FDSERRLQLNWNTCYNIIGGISKGLLYLH 408
C + L I + N +L + D +LQ +N +++ I+ G+ +LH
Sbjct: 93 Y-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH 150
Query: 409 EDSRLKIIHRDLKPSNVLL--------DKDMVAK-----ISDFGMARIFCENQKT--ANT 453
LKIIHRDLKP N+L+ D+ A+ ISDFG+ + Q N
Sbjct: 151 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 454 RRVVGTYGYMAPEYAMEGL---FSVKSDVFSFGVIVLEIIS-GKRNSG 497
GT G+ APE E + D+FS G + I+S GK G
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 289 AATDGFSDSNKLGQGGFGTVYKGVLPNGKEV----AVKRLSRKSWQGLEEFK---NEIIL 341
A D F LG G FG V +L KE A+K L ++ L++ + NE +
Sbjct: 31 AHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 342 IAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGI 400
+ + LV+L + ++ E +P + F RR+ + I
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQI 143
Query: 401 SKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTY 460
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT
Sbjct: 144 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 195
Query: 461 GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
Y+APE + ++ D ++ GV++ E+ +G
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 294 FSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKL----QHR 348
F ++LG G +G V+K +G+ AVKR S ++G ++ ++ + QH
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 349 NLVRLVGCGIEGEEKLLIYELM-PNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYL 407
VRL EG L EL P+ C + + W + + L +L
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTL----LALAHL 173
Query: 408 HEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY 467
H ++H D+KP+N+ L K+ DFG + E G YMAPE
Sbjct: 174 HSQG---LVHLDVKPANIFLGPRGRCKLGDFG---LLVELGTAGAGEVQEGDPRYMAPEL 227
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPL 527
++G + +DVFS G+ +LE+ N G WQ ++G ++ P
Sbjct: 228 -LQGSYGTAADVFSLGLTILEVAC---NMELPHGGEG-------WQQLRQG----YLPPE 272
Query: 528 LMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVAL 564
++ + +R + + + ++ DP +R T ++AL
Sbjct: 273 F--TAGLSSELRSVLV--MMLEPDPKLRATAEALLAL 305
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ L +L + ++ E P + F RR+ + + I
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ K++DFG A+ + T + GT Y+
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYL 206
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 47/232 (20%)
Query: 300 LGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKL-----QHRNLVRL 353
LG G GTV ++G G+ VAVKR+ L +F + ++ KL H N++R
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 74
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFI-----FDSERRLQLNWNTCYNIIGGISKGLLYLH 408
C + L I + N +L + D +LQ +N +++ I+ G+ +LH
Sbjct: 75 Y-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH 132
Query: 409 EDSRLKIIHRDLKPSNVLL--------DKDMVAK-----ISDFGMARIFCENQKT--ANT 453
LKIIHRDLKP N+L+ D+ A+ ISDFG+ + Q + N
Sbjct: 133 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 454 RRVVGTYGYMAPEYAMEG-------LFSVKSDVFSFGVIVLEIIS-GKRNSG 497
GT G+ APE E + D+FS G + I+S GK G
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ L +L + ++ E P + F RR+ + + I
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ K++DFG A+ + T + GT Y+
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYL 206
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH S +++RDLK N++LDKD KI+DFG+ + ++ T T GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGT 312
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 379 IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDF 438
+F +R+ +L IS L YLHE II+RDLK NVLLD + K++D+
Sbjct: 98 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 154
Query: 439 GMARIFCENQKTANTRRVV-GTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSG 497
GM + E + +T GT Y+APE + D ++ GV++ E+++G+ S
Sbjct: 155 GMCK---EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR--SP 209
Query: 498 FYLTGHA----QTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
F + G + Q Y++Q+ E K++ L +K++S+
Sbjct: 210 FDIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKAASV 249
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 379 IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDF 438
+F +R+ +L IS L YLHE II+RDLK NVLLD + K++D+
Sbjct: 94 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 150
Query: 439 GMARIFCENQKTANTRRVV-GTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSG 497
GM + E + +T GT Y+APE + D ++ GV++ E+++G+ S
Sbjct: 151 GMCK---EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR--SP 205
Query: 498 FYLTGHA----QTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
F + G + Q Y++Q+ E K++ L +K++S+
Sbjct: 206 FDIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKAASV 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH S +++RDLK N++LDKD KI+DFG+ + ++ T T GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGT 315
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 35/256 (13%)
Query: 297 SNKLGQGGFGTVYKGVLPN-GKEVAVKRLS--RKSWQGLEEFKNEIILI--AKLQHRNLV 351
S +LG+G F V + + + G+E A K L R+ E +EI ++ AK R ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR-VI 92
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
L E +LI E + E ++ N +I I +G+ YLH+++
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCL-PELAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 412 RLKIIHRDLKPSNVLLDK-----DMVAKISDFGMARIF---CENQKTANTRRVVGTYGYM 463
I+H DLKP N+LL D+ KI DFGM+R CE R ++GT Y+
Sbjct: 152 ---IVHLDLKPQNILLSSIYPLGDI--KIVDFGMSRKIGHACE------LREIMGTPEYL 200
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIIS------GKRNSGFYLTGHAQTLLAYVWQLWKE 517
APE + +D+++ G+I +++ G+ N YL +Q + Y + +
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI-SQVNVDYSEETFSS 259
Query: 518 GKEM--EFVDPLLMKS 531
++ +F+ LL+K+
Sbjct: 260 VSQLATDFIQSLLVKN 275
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN-QKTANTRRVVG 458
I+ GL +L II+RDLK NV+LD + KI+DFGM + EN T+ G
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCG 504
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
T Y+APE + D ++FGV++ E+++G+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRN 349
TDG+ +G G + + + E AVK + + EE + IL+ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFI----FDSERRLQLNWNTCYNIIGGISKGLL 405
++ L +G+ ++ ELM L I F SER ++ I+K +
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSERE-------ASAVLFTITKTVE 130
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDM----VAKISDFGMARIFCENQKTANTRRVVGTY- 460
YLH ++HRDLKPSN+L + +I DFG F + + N + Y
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG----FAKQLRAENGLLMTPCYT 183
Query: 461 -GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE + D++S GV++ +++G
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 294 FSDSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKS-----W---QGLEEFKNEIILIAK 344
+S + LG G FG V+ V KEV VK + ++ W L + EI ++++
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGL 404
++H N+++++ E + + LD F F +R +L+ I + +
Sbjct: 86 VEHANIIKVLDI-FENQGFFQLVMEKHGSGLDLFAF-IDRHPRLDEPLASYIFRQLVSAV 143
Query: 405 LYLHEDSRLK-IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YL RLK IIHRD+K N+++ +D K+ DFG A + E K T GT Y
Sbjct: 144 GYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA-YLERGKLFYT--FCGTIEYC 196
Query: 464 APEYAMEGLF-SVKSDVFSFGVIVLEII 490
APE M + + +++S GV + ++
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 298 NKLGQGGFGTV--YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRNLVRLVG 355
KLG+GGF V +G L +G A+KR+ Q EE + E + H N++RLV
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 356 -CGIEGEEKLLIYELMPNRSLDCFIFDSER-RLQLNWNTCYNIIG---GISKGLLYLHED 410
C E K + L+P + ER + + N+ T I+ GI +GL +H
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 411 SRLKIIHRDLKPSNVLLDKDMVAKISDFG---MARIFCENQKTANTRRVVG----TYGYM 463
HRDLKP+N+LL + + D G A I E + A T + T Y
Sbjct: 154 G---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 464 APEYAMEGLFSVKS--------DVFSFGVIVLEIISGK 493
APE LFSV+S DV+S G ++ ++ G+
Sbjct: 211 APE-----LFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 379 IFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDF 438
+F +R+ +L IS L YLHE II+RDLK NVLLD + K++D+
Sbjct: 109 MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 165
Query: 439 GMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGKRNSGF 498
GM + T T GT Y+APE + D ++ GV++ E+++G+ S F
Sbjct: 166 GMCKEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR--SPF 221
Query: 499 YLTGHA----QTLLAYVWQLWKEGKEMEFVDPLLMKSSSI 534
+ G + Q Y++Q+ E K++ + +K++S+
Sbjct: 222 DIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSMSVKAASV 260
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ K++DFG A+ + T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 299 KLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQHRNLVRLVGC 356
+LG+G FG V++ G + AVK++ LE F+ E++ A L +V L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGA 132
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + EL+ SL I ++ L + +G +GL YLH +I+
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RIL 186
Query: 417 HRDLKPSNVLLDKDMV-AKISDFGMARIFCEN---QKTANTRRVVGTYGYMAPEYAMEGL 472
H D+K NVLL D A + DFG A + + + GT +MAPE M
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 473 FSVKSDVFSFGVIVLEIISG 492
K D++S ++L +++G
Sbjct: 247 CDAKVDIWSSCCMMLHMLNG 266
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQH 347
A D F LG G FG V + G A+K L ++ L++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 348 RNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKGLLY 406
N LV ++ +Y +M + +F RR+ + + I Y
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVA-GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 407 LHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
LH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 467 YAMEGLFSVKSDVFSFGVIVLEIISG 492
+ ++ D ++ GV++ E+ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTVY-KGVLPNGKEVAVKRLSRKSWQGLEEFK---NEIILIAK 344
A D F LG G FG V + G A+K L ++ L++ + NE ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
+ L +L + ++ E P + F RR+ + I
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+++D+ K++DFG A+ + T + GT Y+
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYL 206
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 289 AATDGFS---------DSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNE 338
+TD FS + LG+G V + L +E AVK + ++ E
Sbjct: 1 GSTDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFRE 60
Query: 339 IILIAKLQ-HRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
+ ++ + Q HRN++ L+ E + L++E M S+ I +R N ++
Sbjct: 61 VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI---HKRRHFNELEASVVV 117
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDK-DMVA--KISDFGMARIF-----CENQK 449
++ L +LH I HRDLKP N+L + + V+ KI DFG+ C
Sbjct: 118 QDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 450 TANTRRVVGTYGYMAPE----YAMEG-LFSVKSDVFSFGVIVLEIISG 492
T G+ YMAPE ++ E ++ + D++S GVI+ ++SG
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCEN-QKTANTRRVVG 458
I+ GL +L II+RDLK NV+LD + KI+DFGM + EN T+ G
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCG 183
Query: 459 TYGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
T Y+APE + D ++FGV++ E+++G+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 125/307 (40%), Gaps = 61/307 (19%)
Query: 299 KLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQHRNLVRLVGC 356
+LG+G FG V++ G + AVK++ LE F+ E++ A L +V L G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGA 134
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + EL+ SL + + + L + +G +GL YLH SR +I+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--SR-RIL 188
Query: 417 HRDLKPSNVLLDKDMV-AKISDFGMARIFCEN---QKTANTRRVVGTYGYMAPEYAMEGL 472
H D+K NVLL D A + DFG A + + + GT +MAPE +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 473 FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSS 532
K DV+S ++L +++G + W + F PL +K +
Sbjct: 249 CDAKVDVWSSCCMMLHMLNG----------------CHPWTQF-------FRGPLCLKIA 285
Query: 533 SIPQVVR-----CIHIGLLCVQEDPAVRPTMSNVVALLGSE-SIALS------------- 573
S P VR C + +QE P A LG + + AL
Sbjct: 286 SEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEY 345
Query: 574 -EPRQPP 579
EPR PP
Sbjct: 346 KEPRHPP 352
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 46/281 (16%)
Query: 299 KLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQHRNLVRLVGC 356
+LG+G FG V++ G + AVK++ LE F+ E++ A L +V L G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGA 153
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
EG + EL+ SL + + + L + +G +GL YLH SR +I+
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--SR-RIL 207
Query: 417 HRDLKPSNVLLDKDMV-AKISDFGMARIFCEN---QKTANTRRVVGTYGYMAPEYAMEGL 472
H D+K NVLL D A + DFG A + + + GT +MAPE +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 473 FSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLMKSS 532
K DV+S ++L +++G + W + F PL +K +
Sbjct: 268 CDAKVDVWSSCCMMLHMLNG----------------CHPWTQF-------FRGPLCLKIA 304
Query: 533 SIPQVVR-----CIHIGLLCVQEDPAVRPTMSNVVALLGSE 568
S P VR C + +QE P A LG +
Sbjct: 305 SEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGK 345
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 47/285 (16%)
Query: 299 KLGQGGFGTVYKGVLPNGKEV-AVK--RLSRKSWQGLEEFKNEIILIAKLQHRN--LVRL 353
++G GG V++ VL K++ A+K L Q L+ ++NEI + KLQ + ++RL
Sbjct: 63 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLL-YLHEDSR 412
I + IY +M ++D + +++ W K +L +H +
Sbjct: 122 YDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER-----KSYWKNMLEAVHTIHQ 173
Query: 413 LKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGL 472
I+H DLKP+N L+ M+ K+ DFG+A + + VG YM PE A++ +
Sbjct: 174 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE-AIKDM 231
Query: 473 FSVKS------------DVFSFGVIVLEIISGKRNSGFYLTGHAQTL--LAYVWQLWKEG 518
S + DV+S G I+ + GK T Q + ++ + +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-------TPFQQIINQISKLHAIIDPN 284
Query: 519 KEMEFVDPLLMKSSSIPQVVRCIHIGLLCVQEDPAVRPTMSNVVA 563
E+EF D + + V++C C++ DP R ++ ++A
Sbjct: 285 HEIEFPD---IPEKDLQDVLKC------CLKRDPKQRISIPELLA 320
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 297 SNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRLV 354
S+ LGQG V++G G A+K + S+ + ++ E ++ KL H+N+V+L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 355 GCGIEG--EEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSR 412
E K+LI E P SL + + L + ++ + G+ +L E+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 413 LKIIHRDLKPSNVLL----DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYA 468
I+HR++KP N++ D V K++DFG AR ++++ + + GT Y+ P+
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPDMY 187
Query: 469 MEGL--------FSVKSDVFSFGVIVLEIISG 492
+ + D++S GV +G
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 103/232 (44%), Gaps = 47/232 (20%)
Query: 300 LGQGGFGTV-YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAKL-----QHRNLVRL 353
LG G GTV ++G G+ VAVKR+ L +F + ++ KL H N++R
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 74
Query: 354 VGCGIEGEEKLLIYELMPNRSLDCFI-----FDSERRLQLNWNTCYNIIGGISKGLLYLH 408
C + L I + N +L + D +LQ +N +++ I+ G+ +LH
Sbjct: 75 Y-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH 132
Query: 409 EDSRLKIIHRDLKPSNVLL--------DKDMVAK-----ISDFGMARIFCENQKT--ANT 453
LKIIHRDLKP N+L+ D+ A+ ISDFG+ + Q N
Sbjct: 133 S---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 454 RRVVGTYGYMAPEYAMEG-------LFSVKSDVFSFGVIVLEIIS-GKRNSG 497
GT G+ APE E + D+FS G + I+S GK G
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 294 FSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQHRNLV 351
+ ++G+G FG V++ G + AVK++ LE F+ E++ A L +V
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 113
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
L G EG + EL+ SL I ++ L + +G +GL YLH
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR- 169
Query: 412 RLKIIHRDLKPSNVLLDKDMV-AKISDFGMARIFCEN---QKTANTRRVVGTYGYMAPEY 467
+I+H D+K NVLL D A + DFG A + + + GT +MAPE
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISG 492
M K D++S ++L +++G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 294 FSDSNKLGQGGFGTVYK-GVLPNGKEVAVKRLSRKSWQGLEEFK-NEIILIAKLQHRNLV 351
+ ++G+G FG V++ G + AVK++ LE F+ E++ A L +V
Sbjct: 76 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 129
Query: 352 RLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDS 411
L G EG + EL+ SL I ++ L + +G +GL YLH
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR- 185
Query: 412 RLKIIHRDLKPSNVLLDKDMV-AKISDFGMARIFCEN---QKTANTRRVVGTYGYMAPEY 467
+I+H D+K NVLL D A + DFG A + + + GT +MAPE
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 468 AMEGLFSVKSDVFSFGVIVLEIISG 492
M K D++S ++L +++G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 228
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRN 349
+DG+ +G G + + V E AVK + + EE + IL+ QH N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFI----FDSERRLQLNWNTCYNIIGGISKGLL 405
++ L +G+ L+ ELM L I F SER +T I K +
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-------IGKTVE 135
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDM----VAKISDFGMARIFCENQKTANTRRVVGTY- 460
YLH ++HRDLKPSN+L + +I DFG F + + N + Y
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFG----FAKQLRAENGLLMTPCYT 188
Query: 461 -GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE + D++S G+++ +++G
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 208
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 151 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 202
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRN 349
+DG+ +G G + + V E AVK + + EE + IL+ QH N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPN 82
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFI----FDSERRLQLNWNTCYNIIGGISKGLL 405
++ L +G+ L+ ELM L I F SER +T I K +
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-------IGKTVE 135
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDM----VAKISDFGMARIFCENQKTANTRRVVGTY- 460
YLH ++HRDLKPSN+L + +I DFG F + + N + Y
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFG----FAKQLRAENGLLMTPCYT 188
Query: 461 -GYMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE + D++S G+++ +++G
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH S +++RDLK N++LDKD KI+DFG+ + ++ A + GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGT 174
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 289 AATDGFSDSNKLGQGGFGTV----YKGVLPNGKEVAVKRLSRKSWQGLEEFKNEIILIAK 344
A D F LG G FG V +K +G A+K L ++ L++ ++ +
Sbjct: 25 AQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 81
Query: 345 LQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRL-QLNWNTCYNIIGGISKG 403
LQ N LV ++ +Y +M + +F RR+ + + I
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVA-GGEMFSHLRRIGRFSEPHARFYAAQIVLT 140
Query: 404 LLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYM 463
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+
Sbjct: 141 FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYL 192
Query: 464 APEYAMEGLFSVKSDVFSFGVIVLEIISG 492
APE + ++ D ++ GV++ E+ +G
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH S +++RDLK N++LDKD KI+DFG+ + ++ A + GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGT 172
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 300 LGQGGFGTVYKGVLPNGKEVAVKRLSRKSWQGLEE-----FKNEIILIAKLQHRNLVRLV 354
+G+G FG V L N +V ++ K W+ L+ F+ E ++ + + L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNK-WEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 355 GCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
+ L+ + L + E RL Y +++ ++ + +L
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY-----LAEMVIAIDSVHQLH 195
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE--YAME-- 470
+HRD+KP N+L+D + +++DFG E+ T + VGT Y++PE AME
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED-GTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 471 -GLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQTLLAYVWQLWKEGKEMEFVDPLLM 529
G + + D +S GV + E++ G+ + FY A++L+ ++ + +F +
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGE--TPFY----AESLVETYGKIMNHKERFQFPTQVTD 308
Query: 530 KSSSIPQVVRCIHIGLLCVQE 550
S + ++R L+C +E
Sbjct: 309 VSENAKDLIR----RLICSRE 325
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH S +++RDLK N++LDKD KI+DFG+ + ++ A + GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGT 173
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 297 SNKLGQGGFGTVYKGVLPN-GKEVAVKRLSRKSW-QGLEEFKNEIILIAKLQHRNLVRLV 354
S+ LGQG V++G G A+K + S+ + ++ E ++ KL H+N+V+L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 355 GCGIEGE----EKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
IE E K+LI E P SL + + L + ++ + G+ +L E+
Sbjct: 74 A--IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 411 SRLKIIHRDLKPSNVLL----DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPE 466
I+HR++KP N++ D V K++DFG AR ++++ + GT Y+ P+
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX---LYGTEEYLHPD 185
Query: 467 YAMEGL--------FSVKSDVFSFGVIVLEIISG 492
+ + D++S GV +G
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAP 228
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 300 LGQGGFGTVYKGVLPNGKEV-AVKRLSRKSWQGLEEFKNEIILIAKL--QHRNLVRLVGC 356
LG+G F K V + AVK +S++ +E + I KL H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 357 GIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLKII 416
+ L+ EL+ L I +++ + I+ + + ++H+ + ++
Sbjct: 75 FHDQLHTFLVMELLNGGELFERI---KKKKHFSETEASYIMRKLVSAVSHMHD---VGVV 128
Query: 417 HRDLKPSNVLL---DKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLF 473
HRDLKP N+L + ++ KI DFG AR+ + + T T Y APE + +
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFTLHYAAPELLNQNGY 186
Query: 474 SVKSDVFSFGVIVLEIISGK 493
D++S GVI+ ++SG+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+++D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 289 AATDGFS---------DSNKLGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKNE 338
+TD FS + LG+G V + L +E AVK + ++ E
Sbjct: 1 GSTDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFRE 60
Query: 339 IILIAKLQ-HRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNII 397
+ ++ + Q HRN++ L+ E + L++E M S+ I +R N ++
Sbjct: 61 VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHI---HKRRHFNELEASVVV 117
Query: 398 GGISKGLLYLHEDSRLKIIHRDLKPSNVLLDK-DMVA--KISDFGMARIF-----CENQK 449
++ L +LH I HRDLKP N+L + + V+ KI DF + C
Sbjct: 118 QDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 450 TANTRRVVGTYGYMAPE----YAMEG-LFSVKSDVFSFGVIVLEIISG 492
T G+ YMAPE ++ E ++ + D++S GVI+ ++SG
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 24/211 (11%)
Query: 291 TDGFSDSNKLGQGGFGTVYKGVL-PNGKEVAVKRLSRKSWQGLEEFKNEIILIAKLQHRN 349
TDG+ +G G + + + E AVK + + EE + IL+ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 350 LVRLVGCGIEGEEKLLIYELMPNRSLDCFI----FDSERRLQLNWNTCYNIIGGISKGLL 405
++ L +G+ ++ EL L I F SER ++ I+K +
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASA-------VLFTITKTVE 130
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDM----VAKISDFGMARIFCENQKTANTRRVVGTYG 461
YLH ++HRDLKPSN+L + +I DFG A+ T T
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP--CYTAN 185
Query: 462 YMAPEYAMEGLFSVKSDVFSFGVIVLEIISG 492
++APE + D++S GV++ ++G
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH SR +++RD+K N++LDKD KI+DFG+ + + T T GT
Sbjct: 117 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 171
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH SR +++RD+K N++LDKD KI+DFG+ + + T T GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH SR +++RD+K N++LDKD KI+DFG+ + + T T GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 278 ELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKE-VAVKRLSRKSWQGLEEFK 336
+LP +H +D + +G G FG E VAVK + R + E K
Sbjct: 11 DLPIMH------DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE-KIDENVK 63
Query: 337 NEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
EII L+H N+VR + ++ E L I ++ R + +
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFF 120
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVA--KISDFGMAR--IFCENQKTAN 452
+ G+ Y H +++ HRDLK N LLD KI+DFG ++ + K+A
Sbjct: 121 FQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA- 176
Query: 453 TRRVVGTYGYMAPEYAMEGLFSVK-SDVFSFGVIVLEIISG 492
VGT Y+APE ++ + K +DV+S GV + ++ G
Sbjct: 177 ----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT Y+AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
+ ++ D ++ GV++ E+ +G
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 288 KAATDGFSDSNKLGQGGFGTVYK----GVLPNGKEVAVKRLSR----KSWQGLEEFKNEI 339
K + F LG G +G V+ GK A+K L + + + E + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 340 ILIAKLQHRNLVRLVGCGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIG 398
++ ++ + + + E KL LI + + L + ER + +G
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVG 166
Query: 399 GISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVG 458
I L +LH +L II+RD+K N+LLD + ++DFG+++ F ++ T G
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-TERAYDFCG 222
Query: 459 TYGYMAPEYAMEGL--FSVKSDVFSFGVIVLEIISG 492
T YMAP+ G D +S GV++ E+++G
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH SR +++RD+K N++LDKD KI+DFG+ + + A + GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I + +L + +L +HRD+KP NVLLD + +++DFG + + T + VGT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 239
Query: 460 YGYMAPEY--AME---GLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQT 506
Y++PE AME G + + D +S GV + E++ G+ + FY +T
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 289
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 278 ELPFVHLAVIKAATDGFSDSNKLGQGGFGTVYKGVLPNGKE-VAVKRLSRKSWQGLEEFK 336
+LP +H +D + +G G FG E VAVK + R + E K
Sbjct: 10 DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDENVK 62
Query: 337 NEIILIAKLQHRNLVRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNI 396
EII L+H N+VR + ++ E L I ++ R + +
Sbjct: 63 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFF 119
Query: 397 IGGISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVA--KISDFGMARIFCENQKTANTR 454
+ G+ Y H +++ HRDLK N LLD KI DFG ++ + + +T
Sbjct: 120 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 175
Query: 455 RVVGTYGYMAPEYAMEGLFSVK-SDVFSFGVIVLEIISG 492
VGT Y+APE ++ + K +DV+S GV + ++ G
Sbjct: 176 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH SR +++RD+K N++LDKD KI+DFG+ + + A + GT
Sbjct: 119 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 173
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I + +L + +L +HRD+KP NVLLD + +++DFG + + T + VGT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 255
Query: 460 YGYMAPEY--AME---GLFSVKSDVFSFGVIVLEIISGKRNSGFYLTGHAQT 506
Y++PE AME G + + D +S GV + E++ G+ + FY +T
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 305
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH SR +++RD+K N++LDKD KI+DFG+ + + A + GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 400 ISKGLLYLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGT 459
I L YLH SR +++RD+K N++LDKD KI+DFG+ + + A + GT
Sbjct: 114 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 460 YGYMAPEYAMEGLFSVKSDVFSFGVIVLEIISGK 493
Y+APE + + D + GV++ E++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 161
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 215
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 160
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 214
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 161
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 215
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 147
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 148 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 201
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 147
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 148 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 201
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 160
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 214
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 161
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 215
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNX 129
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 182
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 161
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 215
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 160
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 214
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 175
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 176 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 229
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 148
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 202
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 160
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 214
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 356 CGIEGEEKL-LIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHEDSRLK 414
C + ++ L ++ E MP L + S + W Y ++ +L L +
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYT-----AEVVLALDAIHSMG 194
Query: 415 IIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEY----AME 470
+IHRD+KP N+LLDK K++DFG E + VGT Y++PE +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET-GMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 471 GLFSVKSDVFSFGVIVLEIISGKRNSGFY 499
G + + D +S GV + E++ G ++ FY
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVG--DTPFY 280
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 175
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 176 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 229
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 148
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 202
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 406 YLHEDSRLKIIHRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAP 465
YLH L +I+RDLKP N+L+D+ +++DFG A+ + T + GT +AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAP 207
Query: 466 EYAMEGLFSVKSDVFSFGVIVLEIISG 492
E + ++ D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 148
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 202
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 167
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 168 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 221
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH-- 132
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 133 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 187
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 132
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 133 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 186
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 133
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 134 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 187
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQH--RNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 180
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 181 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 234
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 128
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 129 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 182
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH-- 132
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 133 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 187
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 131
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 132 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 185
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 417 HRDLKPSNVLLDKDMVAKISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAMEGLFSVK 476
HRD+KP N+L+ D A + DFG+A ++K VGT Y APE E + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASA-TTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 477 SDVFSFGVIVLEIISG 492
+D+++ ++ E ++G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN- 128
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 129 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 182
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 300 LGQGGFGTVYKGV-LPNGKEVAVKRLSRKSWQGLEEFKN------EIILIAKLQ--HRNL 350
LG GGFG+VY G+ + + VA+K + + E N E++L+ K+ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 351 VRLVGCGIEGEEKLLIYELMPNRSLDCFIFDSERRLQLNWNTCYNIIGGISKGLLYLHED 410
+RL+ + +LI E P D F F +ER L + + + + + H
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH-- 154
Query: 411 SRLKIIHRDLKPSNVLLDKDMVA-KISDFGMARIFCENQKTANTRRVVGTYGYMAPEYAM 469
++HRD+K N+L+D + K+ DFG + + T GT Y PE+
Sbjct: 155 -NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIR 209
Query: 470 EGLFSVKS-DVFSFGVIVLEIISG 492
+ +S V+S G+++ +++ G
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCG 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,745,386
Number of Sequences: 62578
Number of extensions: 725889
Number of successful extensions: 3957
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 1525
Number of HSP's gapped (non-prelim): 1164
length of query: 611
length of database: 14,973,337
effective HSP length: 105
effective length of query: 506
effective length of database: 8,402,647
effective search space: 4251739382
effective search space used: 4251739382
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)