Query 007247
Match_columns 611
No_of_seqs 278 out of 2993
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 20:58:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007247.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007247hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 1E-68 2.2E-73 599.2 48.0 468 81-589 478-970 (977)
2 PRK14099 glycogen synthase; Pr 100.0 3.1E-67 6.7E-72 575.1 46.8 467 82-589 1-482 (485)
3 PRK14098 glycogen synthase; Pr 100.0 1.1E-66 2.3E-71 571.4 46.9 468 84-588 5-488 (489)
4 TIGR02095 glgA glycogen/starch 100.0 5.7E-63 1.2E-67 543.8 46.5 459 85-586 1-473 (473)
5 PLN02316 synthase/transferase 100.0 3.6E-62 7.8E-67 556.6 48.1 435 77-587 580-1035(1036)
6 PRK00654 glgA glycogen synthas 100.0 5.8E-62 1.3E-66 534.1 46.6 453 85-588 1-465 (466)
7 cd03791 GT1_Glycogen_synthase_ 100.0 1.4E-58 3E-63 509.8 46.2 462 86-584 1-475 (476)
8 COG0297 GlgA Glycogen synthase 100.0 1.1E-58 2.4E-63 495.8 40.7 464 85-589 1-481 (487)
9 TIGR02094 more_P_ylases alpha- 100.0 3.4E-39 7.3E-44 357.1 38.3 473 87-583 1-598 (601)
10 TIGR02468 sucrsPsyn_pln sucros 100.0 6.6E-39 1.4E-43 365.1 40.0 453 80-589 165-674 (1050)
11 PRK10307 putative glycosyl tra 100.0 9.4E-39 2E-43 345.6 37.6 396 85-589 1-411 (412)
12 TIGR02472 sucr_P_syn_N sucrose 100.0 1.2E-38 2.6E-43 347.3 37.7 391 99-584 24-439 (439)
13 TIGR03449 mycothiol_MshA UDP-N 100.0 1E-38 2.2E-43 344.3 36.7 387 87-588 1-404 (405)
14 cd03796 GT1_PIG-A_like This fa 100.0 1.2E-38 2.6E-43 343.3 36.2 364 86-589 1-371 (398)
15 TIGR02149 glgA_Coryne glycogen 100.0 2.7E-38 5.9E-43 338.5 36.7 373 85-587 1-388 (388)
16 PLN02871 UDP-sulfoquinovose:DA 100.0 2.7E-38 5.9E-43 347.1 37.5 376 82-589 56-438 (465)
17 TIGR02470 sucr_synth sucrose s 100.0 2.8E-37 6E-42 345.9 37.4 422 84-583 255-745 (784)
18 PRK15484 lipopolysaccharide 1, 100.0 6.2E-37 1.4E-41 327.6 36.5 362 85-587 3-379 (380)
19 PRK15427 colanic acid biosynth 100.0 9.9E-37 2.1E-41 328.4 35.5 275 227-586 118-406 (406)
20 cd04962 GT1_like_5 This family 100.0 2.2E-36 4.8E-41 321.3 37.1 364 85-586 1-371 (371)
21 cd03818 GT1_ExpC_like This fam 100.0 2.6E-35 5.6E-40 317.1 36.3 373 86-581 1-396 (396)
22 PLN00142 sucrose synthase 100.0 1.2E-35 2.5E-40 332.7 33.7 322 227-583 408-768 (815)
23 TIGR03088 stp2 sugar transfera 100.0 5E-35 1.1E-39 312.1 33.0 359 85-587 2-374 (374)
24 cd03802 GT1_AviGT4_like This f 100.0 1.3E-34 2.9E-39 302.8 34.7 329 85-584 1-335 (335)
25 cd03800 GT1_Sucrose_synthase T 100.0 1.2E-34 2.5E-39 310.6 34.2 380 85-580 7-397 (398)
26 PLN02846 digalactosyldiacylgly 100.0 6.7E-35 1.4E-39 312.7 29.6 381 82-586 2-392 (462)
27 PRK10125 putative glycosyl tra 100.0 1.6E-34 3.4E-39 310.5 31.6 387 85-586 1-405 (405)
28 cd03792 GT1_Trehalose_phosphor 100.0 7.8E-34 1.7E-38 303.0 36.1 275 227-586 85-372 (372)
29 cd03805 GT1_ALG2_like This fam 100.0 1.5E-34 3.1E-39 310.1 30.4 229 309-579 147-392 (392)
30 cd04299 GT1_Glycogen_Phosphory 100.0 1.6E-33 3.4E-38 316.7 37.9 473 86-586 87-691 (778)
31 KOG1111 N-acetylglucosaminyltr 100.0 3.3E-35 7.1E-40 291.3 21.0 368 85-591 1-372 (426)
32 PRK09922 UDP-D-galactose:(gluc 100.0 8.5E-34 1.9E-38 301.3 30.3 349 85-588 1-358 (359)
33 cd04955 GT1_like_6 This family 100.0 7.2E-33 1.6E-37 292.8 37.3 356 86-584 1-363 (363)
34 cd03814 GT1_like_2 This family 100.0 7.1E-33 1.5E-37 291.3 35.0 360 86-584 1-364 (364)
35 cd03825 GT1_wcfI_like This fam 100.0 1.1E-32 2.3E-37 291.4 34.5 351 85-586 1-365 (365)
36 cd05844 GT1_like_7 Glycosyltra 100.0 1E-32 2.3E-37 292.6 33.6 272 227-581 82-366 (367)
37 cd03807 GT1_WbnK_like This fam 100.0 1.1E-32 2.4E-37 288.6 32.8 357 86-584 1-365 (365)
38 cd04951 GT1_WbdM_like This fam 100.0 2.1E-32 4.4E-37 288.7 34.3 353 86-584 1-359 (360)
39 cd03823 GT1_ExpE7_like This fa 100.0 2.1E-32 4.6E-37 286.8 34.0 357 86-584 1-358 (359)
40 cd03819 GT1_WavL_like This fam 100.0 2.1E-32 4.4E-37 288.6 33.7 268 227-575 78-355 (355)
41 cd03795 GT1_like_4 This family 100.0 5.2E-32 1.1E-36 285.3 34.1 349 86-576 1-357 (357)
42 PRK15179 Vi polysaccharide bio 100.0 6.2E-32 1.3E-36 303.4 35.8 283 227-584 400-692 (694)
43 cd03821 GT1_Bme6_like This fam 100.0 3.1E-32 6.7E-37 286.4 31.4 366 86-581 1-375 (375)
44 cd03794 GT1_wbuB_like This fam 100.0 9.9E-32 2.1E-36 283.8 34.3 382 86-580 1-394 (394)
45 cd03799 GT1_amsK_like This is 100.0 1.2E-31 2.6E-36 282.4 34.5 341 86-578 1-354 (355)
46 cd03812 GT1_CapH_like This fam 100.0 5.4E-32 1.2E-36 285.8 31.9 348 86-575 1-352 (358)
47 cd03801 GT1_YqgM_like This fam 100.0 3.8E-31 8.3E-36 276.1 35.4 367 86-584 1-374 (374)
48 cd03822 GT1_ecORF704_like This 100.0 3.1E-31 6.6E-36 279.4 34.2 349 86-584 1-366 (366)
49 cd03817 GT1_UGDG_like This fam 100.0 2.9E-31 6.4E-36 279.2 33.9 365 86-585 1-373 (374)
50 PLN02949 transferase, transfer 100.0 5.5E-31 1.2E-35 286.3 36.4 229 311-590 215-461 (463)
51 cd03809 GT1_mtfB_like This fam 100.0 1.5E-31 3.2E-36 281.7 28.5 360 86-581 1-365 (365)
52 cd03806 GT1_ALG11_like This fa 100.0 5.2E-31 1.1E-35 285.2 32.9 218 309-577 182-418 (419)
53 PRK15490 Vi polysaccharide bio 100.0 4.2E-31 9.1E-36 284.2 31.3 227 316-585 339-575 (578)
54 cd03816 GT1_ALG1_like This fam 100.0 2.1E-30 4.6E-35 280.4 36.2 284 227-578 95-409 (415)
55 cd03798 GT1_wlbH_like This fam 100.0 1.8E-30 3.9E-35 272.1 34.6 372 87-586 1-377 (377)
56 cd03813 GT1_like_3 This family 100.0 1.1E-31 2.4E-36 295.3 25.3 287 227-584 173-475 (475)
57 cd03820 GT1_amsD_like This fam 100.0 1.1E-30 2.4E-35 271.3 30.8 339 86-580 1-347 (348)
58 cd03808 GT1_cap1E_like This fa 100.0 2.5E-30 5.4E-35 269.8 33.1 352 86-580 1-358 (359)
59 PF08323 Glyco_transf_5: Starc 100.0 2.4E-32 5.3E-37 273.5 16.7 234 86-345 1-243 (245)
60 cd03793 GT1_Glycogen_synthase_ 100.0 2.5E-29 5.3E-34 270.6 32.5 447 90-588 7-589 (590)
61 TIGR03087 stp1 sugar transfera 100.0 4.7E-30 1E-34 276.4 23.7 222 308-584 164-395 (397)
62 PLN02501 digalactosyldiacylgly 100.0 4.2E-29 9.2E-34 270.9 27.3 208 317-584 499-708 (794)
63 cd03811 GT1_WabH_like This fam 100.0 3.3E-28 7.2E-33 252.9 30.1 334 86-564 1-342 (353)
64 cd03804 GT1_wbaZ_like This fam 100.0 8.6E-29 1.9E-33 261.7 26.0 205 309-579 146-350 (351)
65 TIGR02918 accessory Sec system 100.0 2E-28 4.4E-33 268.7 28.3 218 313-586 267-500 (500)
66 PHA01633 putative glycosyl tra 100.0 1.7E-27 3.7E-32 246.5 31.7 225 308-581 84-335 (335)
67 PHA01630 putative group 1 glyc 100.0 3.5E-28 7.6E-33 254.0 25.4 231 308-585 85-330 (331)
68 cd04946 GT1_AmsK_like This fam 100.0 2.2E-27 4.8E-32 256.1 29.4 220 308-580 175-406 (407)
69 PLN02275 transferase, transfer 100.0 7.7E-27 1.7E-31 249.0 27.5 245 227-550 100-371 (371)
70 cd04949 GT1_gtfA_like This fam 99.9 3.9E-26 8.4E-31 243.3 24.3 215 310-579 151-372 (372)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 1.6E-25 3.4E-30 244.6 24.8 291 228-582 132-458 (460)
72 TIGR02400 trehalose_OtsA alpha 99.9 6.4E-25 1.4E-29 238.2 24.5 292 228-583 128-454 (456)
73 PRK00726 murG undecaprenyldiph 99.9 7.2E-24 1.6E-28 224.9 31.1 342 85-584 2-356 (357)
74 cd03785 GT1_MurG MurG is an N- 99.9 8.7E-23 1.9E-27 215.7 30.2 324 86-566 1-336 (350)
75 TIGR01133 murG undecaprenyldip 99.9 1.2E-22 2.5E-27 214.5 31.0 322 85-566 1-333 (348)
76 PRK13609 diacylglycerol glucos 99.9 6.1E-22 1.3E-26 212.0 28.4 221 314-586 145-372 (380)
77 PLN03063 alpha,alpha-trehalose 99.9 3.2E-22 7E-27 229.9 26.2 298 228-588 148-480 (797)
78 cd04950 GT1_like_1 Glycosyltra 99.9 5E-21 1.1E-25 204.4 30.6 222 308-585 145-371 (373)
79 PRK14501 putative bifunctional 99.9 6.7E-22 1.4E-26 227.6 21.1 296 228-588 134-465 (726)
80 PRK05749 3-deoxy-D-manno-octul 99.9 1.3E-20 2.9E-25 204.8 26.0 234 308-588 170-422 (425)
81 PF00534 Glycos_transf_1: Glyc 99.9 4.8E-21 1E-25 181.3 19.4 164 387-566 2-170 (172)
82 PLN02605 monogalactosyldiacylg 99.9 4.5E-20 9.7E-25 197.8 27.7 216 314-582 148-378 (382)
83 KOG0853 Glycosyltransferase [C 99.9 1.9E-20 4E-25 198.4 21.8 241 312-587 205-469 (495)
84 cd01635 Glycosyltransferase_GT 99.9 9.2E-20 2E-24 178.6 22.9 118 407-524 109-229 (229)
85 PRK13608 diacylglycerol glucos 99.9 1.4E-19 3E-24 194.5 25.9 223 314-588 145-374 (391)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 2.5E-19 5.3E-24 193.7 24.4 290 229-581 134-478 (487)
87 PRK00025 lpxB lipid-A-disaccha 99.8 4.8E-17 1.1E-21 174.1 26.6 218 313-587 131-375 (380)
88 PRK09814 beta-1,6-galactofuran 99.8 1.5E-16 3.4E-21 167.2 29.4 186 307-566 114-310 (333)
89 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 9.2E-17 2E-21 170.6 27.5 216 313-582 138-361 (363)
90 PF05693 Glycogen_syn: Glycoge 99.8 7.7E-17 1.7E-21 173.1 24.9 444 91-589 3-585 (633)
91 TIGR00236 wecB UDP-N-acetylglu 99.8 1.3E-16 2.9E-21 169.9 25.8 198 316-564 141-344 (365)
92 PLN03064 alpha,alpha-trehalose 99.7 1.4E-16 3E-21 182.7 24.0 296 229-587 233-563 (934)
93 COG0438 RfaG Glycosyltransfera 99.7 1.5E-15 3.3E-20 156.5 25.1 223 316-588 150-379 (381)
94 KOG1387 Glycosyltransferase [C 99.7 1.2E-14 2.7E-19 144.3 26.0 223 315-589 221-462 (465)
95 KOG2941 Beta-1,4-mannosyltrans 99.7 7.2E-14 1.6E-18 139.1 28.1 302 227-580 103-436 (444)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 3.8E-15 8.2E-20 135.0 9.2 130 402-552 2-135 (135)
97 TIGR00215 lpxB lipid-A-disacch 99.6 2.1E-12 4.5E-17 138.4 28.2 190 311-552 133-347 (385)
98 PRK10117 trehalose-6-phosphate 99.5 1.4E-12 3E-17 140.1 21.1 296 228-587 124-455 (474)
99 TIGR03713 acc_sec_asp1 accesso 99.5 1.1E-12 2.4E-17 144.5 20.5 162 403-583 320-519 (519)
100 PF00982 Glyco_transf_20: Glyc 99.5 8.1E-12 1.8E-16 135.8 25.6 295 228-583 142-472 (474)
101 PF13439 Glyco_transf_4: Glyco 99.4 3.5E-12 7.6E-17 119.9 12.2 176 87-362 1-176 (177)
102 PLN02205 alpha,alpha-trehalose 99.4 8.5E-11 1.8E-15 136.0 23.9 298 229-587 203-553 (854)
103 PF13579 Glyco_trans_4_4: Glyc 99.3 4.2E-12 9E-17 117.3 9.2 159 101-356 1-160 (160)
104 COG0380 OtsA Trehalose-6-phosp 99.3 1.2E-09 2.7E-14 117.0 27.3 294 228-584 148-478 (486)
105 COG0058 GlgP Glucan phosphoryl 99.3 1.6E-10 3.4E-15 128.4 20.9 411 96-528 111-632 (750)
106 PRK12446 undecaprenyldiphospho 99.2 1.2E-08 2.7E-13 107.9 30.2 167 389-584 174-350 (352)
107 PRK14986 glycogen phosphorylas 99.2 3.4E-09 7.4E-14 119.4 23.4 290 229-525 314-694 (815)
108 PF13524 Glyco_trans_1_2: Glyc 99.1 2E-10 4.4E-15 96.9 9.0 89 479-581 1-92 (92)
109 TIGR02919 accessory Sec system 99.1 2.1E-09 4.5E-14 116.1 18.1 177 315-560 238-417 (438)
110 COG0707 MurG UDP-N-acetylgluco 99.1 1.8E-07 3.9E-12 98.4 31.4 342 85-586 1-354 (357)
111 PRK14985 maltodextrin phosphor 99.1 3.1E-09 6.7E-14 119.2 18.8 291 227-525 302-680 (798)
112 cd04300 GT1_Glycogen_Phosphory 99.1 1.3E-08 2.7E-13 115.1 22.9 287 227-525 300-681 (797)
113 TIGR02093 P_ylase glycogen/sta 99.0 2.5E-08 5.3E-13 112.3 20.3 288 227-525 297-678 (794)
114 PF00343 Phosphorylase: Carboh 98.9 7.3E-08 1.6E-12 107.4 21.0 288 230-525 216-595 (713)
115 KOG3742 Glycogen synthase [Car 98.8 8.5E-09 1.8E-13 106.0 8.3 321 228-587 174-614 (692)
116 PF09314 DUF1972: Domain of un 98.7 3.2E-07 7E-12 86.9 14.8 182 85-358 2-185 (185)
117 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 4.3E-06 9.2E-11 89.1 24.1 214 315-582 143-364 (365)
118 COG0763 LpxB Lipid A disacchar 98.6 1.1E-05 2.3E-10 83.7 22.4 258 197-553 64-345 (381)
119 PF04007 DUF354: Protein of un 98.6 1E-05 2.2E-10 84.4 22.2 295 85-551 1-309 (335)
120 cd03784 GT1_Gtf_like This fami 98.5 2.8E-05 6E-10 83.9 25.3 124 401-552 239-372 (401)
121 PF02350 Epimerase_2: UDP-N-ac 98.5 3.3E-05 7.2E-10 81.6 23.5 271 227-583 67-345 (346)
122 PF02684 LpxB: Lipid-A-disacch 98.5 5.7E-05 1.2E-09 79.9 24.2 192 310-552 127-340 (373)
123 TIGR03492 conserved hypothetic 98.4 6.3E-05 1.4E-09 81.0 24.9 209 314-584 158-393 (396)
124 PF13528 Glyco_trans_1_3: Glyc 98.4 2.7E-05 5.9E-10 81.1 20.9 119 401-549 192-317 (318)
125 PF13477 Glyco_trans_4_2: Glyc 98.4 5.4E-06 1.2E-10 75.2 12.2 34 86-128 1-34 (139)
126 TIGR03590 PseG pseudaminic aci 98.3 5.3E-05 1.1E-09 77.7 20.1 96 403-508 172-268 (279)
127 PRK01021 lpxB lipid-A-disaccha 98.3 0.00024 5.1E-09 78.7 24.2 205 310-562 355-579 (608)
128 COG0381 WecB UDP-N-acetylgluco 98.2 0.0033 7.2E-08 65.7 30.9 223 316-588 145-373 (383)
129 PHA03392 egt ecdysteroid UDP-g 98.0 0.0018 3.9E-08 72.0 25.4 125 402-552 297-432 (507)
130 COG1519 KdtA 3-deoxy-D-manno-o 98.0 0.0027 5.8E-08 66.9 23.8 211 307-566 168-398 (419)
131 PF13844 Glyco_transf_41: Glyc 97.9 0.00047 1E-08 74.5 16.9 178 390-587 275-468 (468)
132 COG1817 Uncharacterized protei 97.9 0.0018 4E-08 65.1 19.3 210 313-588 123-341 (346)
133 TIGR00661 MJ1255 conserved hyp 97.8 0.0023 5E-08 66.9 20.0 119 403-552 190-314 (321)
134 PRK02797 4-alpha-L-fucosyltran 97.5 0.0084 1.8E-07 60.9 18.1 165 402-587 146-318 (322)
135 PRK14089 ipid-A-disaccharide s 97.3 0.036 7.9E-07 58.4 21.8 91 403-507 169-261 (347)
136 PF12000 Glyco_trans_4_3: Gkyc 97.3 0.003 6.4E-08 59.3 11.3 130 193-362 39-170 (171)
137 TIGR01426 MGT glycosyltransfer 97.2 0.0085 1.9E-07 64.4 15.2 129 402-552 226-359 (392)
138 COG3914 Spy Predicted O-linked 97.1 0.028 6.1E-07 61.2 18.0 180 391-589 421-617 (620)
139 PF00862 Sucrose_synth: Sucros 97.0 0.0013 2.8E-08 70.4 7.1 189 85-329 273-481 (550)
140 COG4641 Uncharacterized protei 97.0 0.057 1.2E-06 56.2 18.0 211 316-588 138-364 (373)
141 PRK10017 colanic acid biosynth 96.9 0.94 2E-05 49.2 32.1 216 308-566 168-404 (426)
142 PF04464 Glyphos_transf: CDP-G 96.9 0.039 8.4E-07 58.8 16.8 193 309-552 127-336 (369)
143 PF07429 Glyco_transf_56: 4-al 96.8 0.15 3.3E-06 52.7 19.7 164 402-585 185-355 (360)
144 COG3660 Predicted nucleoside-d 96.6 0.28 6E-06 48.6 18.9 103 401-508 161-273 (329)
145 KOG1050 Trehalose-6-phosphate 96.5 0.097 2.1E-06 60.1 17.2 262 228-553 141-441 (732)
146 COG4671 Predicted glycosyl tra 96.3 1.7 3.7E-05 45.1 23.8 137 403-552 221-365 (400)
147 COG1819 Glycosyl transferases, 96.2 0.11 2.5E-06 56.1 14.9 159 401-583 237-399 (406)
148 PF06258 Mito_fiss_Elm1: Mitoc 95.4 0.68 1.5E-05 48.1 16.4 105 401-510 146-259 (311)
149 PF11997 DUF3492: Domain of un 95.1 0.033 7.1E-07 56.6 5.4 43 85-128 1-43 (268)
150 PF10087 DUF2325: Uncharacteri 94.1 0.099 2.2E-06 44.3 5.3 80 434-514 2-89 (97)
151 COG3980 spsG Spore coat polysa 93.0 5.1 0.00011 40.5 15.6 87 404-502 161-248 (318)
152 PF12038 DUF3524: Domain of un 92.8 0.44 9.4E-06 44.2 7.5 21 313-333 116-136 (168)
153 PF11440 AGT: DNA alpha-glucos 92.5 13 0.00028 37.5 21.8 137 406-552 187-353 (355)
154 PF04101 Glyco_tran_28_C: Glyc 92.3 0.017 3.7E-07 54.1 -2.5 90 458-563 56-153 (167)
155 PLN02448 UDP-glycosyltransfera 92.2 3 6.5E-05 45.9 14.6 135 401-552 274-415 (459)
156 TIGR02195 heptsyl_trn_II lipop 91.7 2.3 4.9E-05 44.5 12.5 112 388-507 162-277 (334)
157 PRK10422 lipopolysaccharide co 91.3 8.5 0.00018 40.7 16.5 103 401-508 183-289 (352)
158 PLN02562 UDP-glycosyltransfera 90.4 5.2 0.00011 43.9 14.1 130 402-552 274-413 (448)
159 PF06925 MGDG_synth: Monogalac 89.9 1.6 3.5E-05 40.9 8.4 26 314-342 135-160 (169)
160 PF01075 Glyco_transf_9: Glyco 89.7 2.8 6E-05 41.7 10.5 102 401-507 105-209 (247)
161 PLN02670 transferase, transfer 89.6 7.9 0.00017 42.7 14.7 108 472-586 351-466 (472)
162 TIGR02193 heptsyl_trn_I lipopo 89.4 8.3 0.00018 40.0 14.3 135 402-549 180-318 (319)
163 cd03789 GT1_LPS_heptosyltransf 88.8 3.1 6.7E-05 42.3 10.2 100 404-510 124-227 (279)
164 TIGR03609 S_layer_CsaB polysac 87.3 27 0.00058 35.8 16.3 100 403-507 173-276 (298)
165 COG0859 RfaF ADP-heptose:LPS h 86.4 4.7 0.0001 42.3 10.2 98 403-507 177-277 (334)
166 PLN02410 UDP-glucoronosyl/UDP- 86.2 13 0.00028 40.9 13.7 70 472-553 336-411 (451)
167 TIGR02201 heptsyl_trn_III lipo 86.0 13 0.00028 39.0 13.4 100 403-507 183-286 (344)
168 PLN02210 UDP-glucosyl transfer 84.9 14 0.00031 40.5 13.4 138 402-552 270-415 (456)
169 PF08288 PIGA: PIGA (GPI ancho 84.7 4.9 0.00011 33.1 7.0 36 227-268 50-85 (90)
170 PLN03007 UDP-glucosyltransfera 84.4 17 0.00038 40.2 13.9 141 401-552 285-440 (482)
171 PF00201 UDPGT: UDP-glucoronos 84.0 4 8.6E-05 45.3 8.7 139 388-552 264-409 (500)
172 PF05159 Capsule_synth: Capsul 83.7 5.6 0.00012 40.3 9.0 101 400-509 115-227 (269)
173 PLN02167 UDP-glycosyltransfera 82.3 22 0.00047 39.4 13.5 141 402-552 281-434 (475)
174 PRK10916 ADP-heptose:LPS hepto 81.8 16 0.00034 38.5 11.8 110 390-507 170-287 (348)
175 PLN02207 UDP-glycosyltransfera 81.6 30 0.00065 38.2 14.1 140 401-551 275-425 (468)
176 PLN02173 UDP-glucosyl transfer 81.0 27 0.00057 38.4 13.4 139 402-552 265-408 (449)
177 PLN02863 UDP-glucoronosyl/UDP- 80.9 23 0.0005 39.2 13.0 135 402-551 284-432 (477)
178 PF01113 DapB_N: Dihydrodipico 80.6 2.6 5.6E-05 37.4 4.5 45 469-513 60-104 (124)
179 PF01975 SurE: Survival protei 79.9 1.7 3.8E-05 41.9 3.4 39 85-130 1-39 (196)
180 PLN00164 glucosyltransferase; 79.8 39 0.00085 37.4 14.4 75 472-552 351-431 (480)
181 PLN02208 glycosyltransferase f 79.7 54 0.0012 35.9 15.3 74 472-553 323-402 (442)
182 KOG0780 Signal recognition par 79.1 32 0.0007 36.5 12.3 169 404-584 156-341 (483)
183 PF15024 Glyco_transf_18: Glyc 78.3 11 0.00023 41.9 9.1 160 403-585 278-455 (559)
184 PLN02764 glycosyltransferase f 77.7 31 0.00068 37.9 12.6 74 472-552 329-407 (453)
185 PLN02152 indole-3-acetate beta 77.4 42 0.00091 36.9 13.6 138 402-552 262-417 (455)
186 PLN03004 UDP-glycosyltransfera 77.2 34 0.00074 37.6 12.8 139 401-552 270-424 (451)
187 PRK10964 ADP-heptose:LPS hepto 76.2 23 0.0005 36.8 10.8 100 403-509 180-281 (322)
188 PLN02554 UDP-glycosyltransfera 76.0 50 0.0011 36.6 13.9 141 402-551 275-439 (481)
189 PF03016 Exostosin: Exostosin 75.8 9.2 0.0002 39.1 7.6 68 470-547 230-300 (302)
190 PF02951 GSH-S_N: Prokaryotic 75.1 3.3 7.2E-05 36.5 3.5 40 85-127 1-40 (119)
191 PLN02555 limonoid glucosyltran 74.8 70 0.0015 35.5 14.5 75 473-552 350-429 (480)
192 KOG1021 Acetylglucosaminyltran 73.2 29 0.00063 38.3 11.1 84 469-565 336-422 (464)
193 PLN02992 coniferyl-alcohol glu 70.4 93 0.002 34.5 14.1 73 472-552 350-427 (481)
194 PLN00414 glycosyltransferase f 67.2 1.2E+02 0.0026 33.3 14.1 74 472-552 324-402 (446)
195 PRK00207 sulfur transfer compl 66.0 8.7 0.00019 34.3 4.2 38 85-125 1-39 (128)
196 KOG2884 26S proteasome regulat 65.9 58 0.0013 31.6 9.6 119 402-552 108-229 (259)
197 PF03033 Glyco_transf_28: Glyc 65.6 7.3 0.00016 34.7 3.7 27 101-127 9-35 (139)
198 PLN00016 RNA-binding protein; 64.7 7.3 0.00016 41.6 4.1 38 84-127 52-89 (378)
199 cd06533 Glyco_transf_WecG_TagA 61.5 54 0.0012 30.8 8.9 101 412-515 27-138 (171)
200 PF04413 Glycos_transf_N: 3-De 61.2 65 0.0014 30.7 9.5 39 308-355 141-179 (186)
201 TIGR00696 wecB_tagA_cpsF bacte 60.4 40 0.00086 31.9 7.7 99 415-516 32-140 (177)
202 PF03808 Glyco_tran_WecB: Glyc 59.9 49 0.0011 31.0 8.3 103 413-516 30-141 (172)
203 COG2910 Putative NADH-flavin r 58.6 12 0.00025 35.7 3.6 33 85-127 1-33 (211)
204 PLN02534 UDP-glycosyltransfera 57.8 2.7E+02 0.0058 31.0 14.8 78 472-551 356-443 (491)
205 cd03146 GAT1_Peptidase_E Type 57.7 1.1E+02 0.0023 29.8 10.6 106 405-510 3-124 (212)
206 PRK09739 hypothetical protein; 56.1 18 0.00039 34.8 4.8 43 82-127 1-43 (199)
207 KOG2099 Glycogen phosphorylase 55.6 9.2 0.0002 42.1 2.8 138 389-526 550-715 (843)
208 PF03358 FMN_red: NADPH-depend 54.1 17 0.00037 33.0 4.1 40 85-127 1-40 (152)
209 PF08660 Alg14: Oligosaccharid 54.0 1.2E+02 0.0026 28.4 9.8 37 227-265 92-128 (170)
210 PF02826 2-Hacid_dh_C: D-isome 53.7 49 0.0011 31.2 7.2 81 431-513 36-133 (178)
211 PRK10840 transcriptional regul 53.6 2.1E+02 0.0045 27.3 12.1 110 431-552 3-126 (216)
212 COG0111 SerA Phosphoglycerate 53.3 44 0.00096 34.9 7.4 81 431-513 142-239 (324)
213 PRK06249 2-dehydropantoate 2-r 52.9 15 0.00033 38.0 4.0 35 82-127 3-37 (313)
214 COG4635 HemG Flavodoxin [Energ 52.2 18 0.00038 33.5 3.6 37 85-126 1-37 (175)
215 PRK10360 DNA-binding transcrip 51.3 1.9E+02 0.004 26.7 11.0 108 433-552 3-118 (196)
216 PRK10037 cell division protein 50.0 15 0.00033 36.7 3.3 35 85-125 1-37 (250)
217 PLN02927 antheraxanthin epoxid 49.5 26 0.00057 40.4 5.4 34 81-125 78-111 (668)
218 KOG1192 UDP-glucuronosyl and U 49.3 2.5E+02 0.0054 30.8 13.2 130 402-552 278-422 (496)
219 CHL00072 chlL photochlorophyll 48.4 16 0.00034 37.6 3.2 35 85-127 1-37 (290)
220 PRK03692 putative UDP-N-acetyl 47.7 65 0.0014 32.2 7.3 97 416-515 90-196 (243)
221 PRK08410 2-hydroxyacid dehydro 47.6 52 0.0011 34.2 6.9 81 431-513 145-238 (311)
222 PRK00048 dihydrodipicolinate r 44.9 54 0.0012 33.0 6.4 42 470-511 54-95 (257)
223 PRK13234 nifH nitrogenase redu 44.3 24 0.00053 36.3 3.8 38 82-126 1-40 (295)
224 PF09949 DUF2183: Uncharacteri 44.3 47 0.001 28.3 4.8 43 418-462 53-95 (100)
225 PRK06932 glycerate dehydrogena 44.1 61 0.0013 33.7 6.7 81 431-513 147-239 (314)
226 KOG4626 O-linked N-acetylgluco 43.8 1.8E+02 0.0038 33.1 10.1 181 390-589 749-944 (966)
227 PRK08305 spoVFB dipicolinate s 42.9 37 0.00079 32.8 4.5 37 83-127 4-42 (196)
228 PF02374 ArsA_ATPase: Anion-tr 42.9 23 0.00049 36.8 3.3 37 85-128 1-39 (305)
229 TIGR01915 npdG NADPH-dependent 42.9 25 0.00054 34.4 3.5 33 85-127 1-33 (219)
230 cd03129 GAT1_Peptidase_E_like 42.8 3.1E+02 0.0068 26.3 11.8 99 413-511 11-125 (210)
231 PRK13932 stationary phase surv 42.3 25 0.00055 35.4 3.4 39 83-129 4-42 (257)
232 COG1819 Glycosyl transferases, 42.3 21 0.00046 38.6 3.1 38 84-127 1-38 (406)
233 PF04230 PS_pyruv_trans: Polys 41.6 3.4E+02 0.0073 26.3 12.2 90 414-508 189-284 (286)
234 TIGR01007 eps_fam capsular exo 41.5 35 0.00077 32.7 4.3 40 84-127 16-55 (204)
235 PRK07236 hypothetical protein; 41.0 25 0.00054 37.5 3.4 35 81-126 3-37 (386)
236 PRK05708 2-dehydropantoate 2-r 41.0 28 0.0006 36.0 3.7 33 84-127 2-34 (305)
237 PRK09271 flavodoxin; Provision 40.7 38 0.00083 31.3 4.2 36 85-125 1-36 (160)
238 cd00027 BRCT Breast Cancer Sup 40.6 83 0.0018 23.2 5.6 64 432-507 2-65 (72)
239 PF12996 DUF3880: DUF based on 40.0 69 0.0015 25.8 5.1 44 312-366 14-57 (79)
240 PRK05718 keto-hydroxyglutarate 39.7 2.1E+02 0.0046 27.9 9.3 71 415-485 24-96 (212)
241 COG1763 MobB Molybdopterin-gua 39.5 39 0.00084 31.5 4.0 40 84-128 1-40 (161)
242 PRK13396 3-deoxy-7-phosphohept 39.5 4.9E+02 0.011 27.6 13.5 104 401-508 99-216 (352)
243 PRK06487 glycerate dehydrogena 39.3 67 0.0014 33.5 6.2 81 431-513 148-239 (317)
244 TIGR00036 dapB dihydrodipicoli 39.0 66 0.0014 32.6 5.9 37 474-510 66-102 (266)
245 PRK13398 3-deoxy-7-phosphohept 38.5 4.4E+02 0.0095 26.7 13.9 101 404-508 28-142 (266)
246 CHL00200 trpA tryptophan synth 37.9 4.4E+02 0.0096 26.6 12.7 122 401-527 91-233 (263)
247 PF02525 Flavodoxin_2: Flavodo 37.6 37 0.00079 32.5 3.7 40 85-126 1-41 (199)
248 TIGR01380 glut_syn glutathione 37.6 26 0.00057 36.4 2.9 40 85-127 1-40 (312)
249 PLN02695 GDP-D-mannose-3',5'-e 37.4 35 0.00076 36.3 3.8 36 82-127 19-54 (370)
250 PRK06756 flavodoxin; Provision 36.8 49 0.0011 29.9 4.2 37 85-126 2-38 (148)
251 TIGR00087 surE 5'/3'-nucleotid 36.6 33 0.00072 34.3 3.3 37 85-129 1-37 (244)
252 TIGR01425 SRP54_euk signal rec 36.3 5.1E+02 0.011 28.3 12.4 98 477-583 241-340 (429)
253 COG1052 LdhA Lactate dehydroge 36.1 1E+02 0.0022 32.3 6.9 44 470-513 194-242 (324)
254 PRK13397 3-deoxy-7-phosphohept 35.7 4.7E+02 0.01 26.3 12.6 91 416-508 27-130 (250)
255 PRK13243 glyoxylate reductase; 35.4 91 0.002 32.7 6.5 44 470-513 198-246 (333)
256 COG4007 Predicted dehydrogenas 35.4 16 0.00034 36.4 0.7 35 100-139 31-66 (340)
257 PLN02928 oxidoreductase family 34.5 87 0.0019 33.1 6.2 45 469-513 219-268 (347)
258 PLN03015 UDP-glucosyl transfer 34.4 6.7E+02 0.015 27.7 13.6 73 472-551 347-425 (470)
259 TIGR01281 DPOR_bchL light-inde 34.2 36 0.00079 34.2 3.2 33 85-125 1-35 (268)
260 PRK15409 bifunctional glyoxyla 33.9 1.1E+02 0.0024 32.0 6.7 44 470-513 194-242 (323)
261 PF01081 Aldolase: KDPG and KH 33.3 2.5E+02 0.0054 27.1 8.5 68 418-485 20-89 (196)
262 COG2327 WcaK Polysaccharide py 33.1 6.4E+02 0.014 27.1 27.5 122 418-552 225-350 (385)
263 COG1553 DsrE Uncharacterized c 32.9 70 0.0015 28.3 4.2 39 85-126 1-40 (126)
264 PRK13671 hypothetical protein; 32.8 1.5E+02 0.0032 30.7 7.2 35 405-439 3-39 (298)
265 PF10649 DUF2478: Protein of u 32.7 66 0.0014 29.9 4.3 38 472-509 89-132 (159)
266 PRK06015 keto-hydroxyglutarate 32.6 3.6E+02 0.0078 26.1 9.5 70 416-485 14-85 (201)
267 PF01408 GFO_IDH_MocA: Oxidore 32.5 1.8E+02 0.0039 24.7 7.0 76 421-507 16-93 (120)
268 cd01425 RPS2 Ribosomal protein 32.5 2.3E+02 0.005 27.1 8.2 40 475-515 126-166 (193)
269 PRK13849 putative crown gall t 32.3 47 0.001 32.9 3.5 37 85-127 1-39 (231)
270 TIGR02069 cyanophycinase cyano 32.2 5.2E+02 0.011 25.8 11.0 104 408-511 4-127 (250)
271 COG0300 DltE Short-chain dehyd 31.7 57 0.0012 33.0 4.0 27 100-129 15-41 (265)
272 PRK12825 fabG 3-ketoacyl-(acyl 31.3 55 0.0012 31.7 3.9 36 82-127 4-39 (249)
273 cd02040 NifH NifH gene encodes 31.1 47 0.001 33.2 3.4 28 100-127 9-38 (270)
274 PRK13869 plasmid-partitioning 31.0 47 0.001 35.9 3.5 37 83-125 119-157 (405)
275 PRK12827 short chain dehydroge 31.0 59 0.0013 31.7 4.1 34 83-126 5-38 (249)
276 COG0052 RpsB Ribosomal protein 30.9 3.4E+02 0.0073 27.2 9.0 37 477-515 157-195 (252)
277 COG1090 Predicted nucleoside-d 30.9 35 0.00076 34.6 2.3 31 99-129 3-33 (297)
278 PRK07454 short chain dehydroge 30.8 54 0.0012 32.0 3.7 35 84-127 5-39 (241)
279 TIGR01182 eda Entner-Doudoroff 30.7 4.1E+02 0.009 25.7 9.6 70 416-485 18-89 (204)
280 TIGR00288 conserved hypothetic 30.5 1.9E+02 0.0041 26.9 6.9 67 415-483 89-155 (160)
281 PF00201 UDPGT: UDP-glucoronos 30.2 16 0.00036 40.4 -0.1 27 102-128 11-37 (500)
282 TIGR03453 partition_RepA plasm 30.1 52 0.0011 35.2 3.7 40 82-127 101-142 (387)
283 PRK13933 stationary phase surv 30.1 48 0.001 33.4 3.1 38 85-130 1-38 (253)
284 PF06564 YhjQ: YhjQ protein; 29.9 63 0.0014 32.3 3.9 36 85-126 1-38 (243)
285 PLN02306 hydroxypyruvate reduc 29.8 1.2E+02 0.0026 32.6 6.4 45 469-513 229-278 (386)
286 COG0496 SurE Predicted acid ph 29.7 48 0.001 33.2 3.0 37 85-129 1-37 (252)
287 PRK14619 NAD(P)H-dependent gly 29.4 59 0.0013 33.6 3.9 34 83-127 3-36 (308)
288 PRK15438 erythronate-4-phospha 29.3 1.4E+02 0.003 32.0 6.6 81 431-513 116-213 (378)
289 COG4088 Predicted nucleotide k 29.3 39 0.00084 32.9 2.2 39 85-128 1-39 (261)
290 PRK05246 glutathione synthetas 29.1 43 0.00092 34.8 2.7 40 85-127 2-41 (316)
291 PF12683 DUF3798: Protein of u 29.0 3.1E+02 0.0067 27.8 8.5 111 388-505 23-135 (275)
292 PRK12921 2-dehydropantoate 2-r 28.9 51 0.0011 33.7 3.3 31 85-126 1-31 (305)
293 KOG1429 dTDP-glucose 4-6-dehyd 28.9 72 0.0016 32.6 4.1 38 80-127 23-60 (350)
294 PF03721 UDPG_MGDP_dh_N: UDP-g 28.7 63 0.0014 30.8 3.6 32 85-127 1-32 (185)
295 PRK13935 stationary phase surv 28.7 52 0.0011 33.1 3.1 38 85-130 1-38 (253)
296 PRK05993 short chain dehydroge 28.5 62 0.0013 32.6 3.8 34 85-127 4-37 (277)
297 PF02635 DrsE: DsrE/DsrF-like 28.3 98 0.0021 26.3 4.6 40 85-127 1-43 (122)
298 TIGR01754 flav_RNR ribonucleot 28.3 71 0.0015 28.6 3.7 35 85-124 1-35 (140)
299 PRK05866 short chain dehydroge 28.3 80 0.0017 32.2 4.6 37 81-127 37-73 (293)
300 PLN02166 dTDP-glucose 4,6-dehy 28.2 55 0.0012 35.8 3.5 35 82-126 118-152 (436)
301 PRK06522 2-dehydropantoate 2-r 28.2 57 0.0012 33.3 3.5 32 85-127 1-32 (304)
302 PRK13185 chlL protochlorophyll 27.9 57 0.0012 32.8 3.4 27 100-126 10-38 (270)
303 PF00389 2-Hacid_dh: D-isomer 27.7 3.7E+02 0.0079 23.6 8.3 80 458-546 20-101 (133)
304 COG0569 TrkA K+ transport syst 27.7 37 0.0008 33.5 1.9 26 102-127 7-32 (225)
305 PRK05282 (alpha)-aspartyl dipe 27.6 5.8E+02 0.013 25.2 10.3 105 404-510 4-123 (233)
306 TIGR00670 asp_carb_tr aspartat 27.6 5.1E+02 0.011 26.8 10.3 87 389-486 140-226 (301)
307 PRK01372 ddl D-alanine--D-alan 27.5 79 0.0017 32.3 4.4 44 82-127 2-45 (304)
308 PF02441 Flavoprotein: Flavopr 27.5 71 0.0015 28.2 3.5 36 85-127 1-36 (129)
309 COG1192 Soj ATPases involved i 27.4 67 0.0014 32.0 3.8 37 85-127 2-41 (259)
310 cd01080 NAD_bind_m-THF_DH_Cycl 27.4 4.1E+02 0.0088 24.8 8.7 78 418-500 29-109 (168)
311 PRK06753 hypothetical protein; 27.2 51 0.0011 34.8 3.0 30 85-125 1-30 (373)
312 CHL00175 minD septum-site dete 27.2 87 0.0019 31.7 4.6 37 84-126 14-52 (281)
313 PRK07308 flavodoxin; Validated 27.1 73 0.0016 28.7 3.6 26 100-125 12-37 (146)
314 PRK08163 salicylate hydroxylas 27.0 58 0.0012 34.7 3.4 33 83-126 3-35 (396)
315 PLN02572 UDP-sulfoquinovose sy 27.0 78 0.0017 34.6 4.5 35 81-125 44-78 (442)
316 PRK06436 glycerate dehydrogena 26.9 1.7E+02 0.0037 30.3 6.7 44 470-513 167-215 (303)
317 PRK05920 aromatic acid decarbo 26.6 96 0.0021 30.1 4.5 37 83-127 2-39 (204)
318 COG0716 FldA Flavodoxins [Ener 26.5 78 0.0017 28.8 3.7 36 85-125 2-37 (151)
319 PRK13232 nifH nitrogenase redu 26.5 56 0.0012 33.0 3.0 26 100-125 9-36 (273)
320 PRK11104 hemG protoporphyrinog 26.3 68 0.0015 30.2 3.4 36 85-126 1-36 (177)
321 PRK10427 putative PTS system f 26.3 1.1E+02 0.0023 26.8 4.3 38 85-127 3-42 (114)
322 TIGR03012 sulf_tusD_dsrE sulfu 26.1 96 0.0021 27.5 4.1 37 86-125 1-38 (127)
323 TIGR00959 ffh signal recogniti 26.0 8.8E+02 0.019 26.4 13.1 82 489-583 255-340 (428)
324 PRK00346 surE 5'(3')-nucleotid 25.8 64 0.0014 32.4 3.2 37 85-129 1-37 (250)
325 PF13263 PHP_C: PHP-associated 25.8 27 0.00059 26.1 0.4 45 493-547 8-52 (56)
326 PRK06180 short chain dehydroge 25.8 70 0.0015 32.1 3.6 25 100-127 13-37 (277)
327 PRK12480 D-lactate dehydrogena 25.6 1.5E+02 0.0033 31.0 6.2 44 470-513 192-240 (330)
328 PRK06179 short chain dehydroge 25.5 74 0.0016 31.7 3.7 25 100-127 13-37 (270)
329 PF09140 MipZ: ATPase MipZ; I 25.5 66 0.0014 32.2 3.1 28 100-127 9-38 (261)
330 PRK13934 stationary phase surv 25.3 65 0.0014 32.6 3.1 37 85-129 1-37 (266)
331 PF13460 NAD_binding_10: NADH( 25.3 51 0.0011 30.6 2.3 28 100-127 4-31 (183)
332 PLN02778 3,5-epimerase/4-reduc 25.2 67 0.0015 33.0 3.4 32 83-124 8-39 (298)
333 PRK05693 short chain dehydroge 25.2 67 0.0015 32.1 3.3 34 85-127 1-34 (274)
334 PRK06924 short chain dehydroge 25.0 70 0.0015 31.3 3.4 25 100-127 10-34 (251)
335 PRK06849 hypothetical protein; 25.0 73 0.0016 34.0 3.8 36 82-127 2-37 (389)
336 PF04392 ABC_sub_bind: ABC tra 24.9 4.3E+02 0.0094 26.8 9.3 93 415-507 115-218 (294)
337 PRK09730 putative NAD(P)-bindi 24.8 68 0.0015 31.2 3.2 26 102-127 9-34 (247)
338 TIGR01968 minD_bact septum sit 24.7 71 0.0015 31.6 3.4 26 100-125 10-37 (261)
339 PF00205 TPP_enzyme_M: Thiamin 24.5 1.3E+02 0.0029 26.6 4.8 18 466-483 67-84 (137)
340 COG2085 Predicted dinucleotide 24.3 50 0.0011 32.1 2.0 29 101-129 7-35 (211)
341 PRK13235 nifH nitrogenase redu 24.3 71 0.0015 32.3 3.3 27 100-126 9-37 (274)
342 PRK11790 D-3-phosphoglycerate 24.2 1.5E+02 0.0033 32.1 5.9 45 469-513 196-245 (409)
343 PF00852 Glyco_transf_10: Glyc 24.1 1E+02 0.0022 32.6 4.5 77 471-559 222-303 (349)
344 PRK15469 ghrA bifunctional gly 24.1 1.4E+02 0.0031 30.9 5.6 45 469-513 183-232 (312)
345 cd05565 PTS_IIB_lactose PTS_II 24.1 2.8E+02 0.0061 23.5 6.3 73 434-507 4-79 (99)
346 PF05686 Glyco_transf_90: Glyc 24.1 3E+02 0.0066 29.6 8.2 49 537-587 268-319 (395)
347 COG0003 ArsA Predicted ATPase 23.9 88 0.0019 32.7 3.9 75 85-178 2-79 (322)
348 PRK14618 NAD(P)H-dependent gly 23.9 78 0.0017 32.9 3.6 34 83-127 3-36 (328)
349 PRK06719 precorrin-2 dehydroge 23.8 5.7E+02 0.012 23.4 10.9 82 473-563 67-153 (157)
350 PRK02102 ornithine carbamoyltr 23.8 8.2E+02 0.018 25.7 11.1 84 389-484 145-232 (331)
351 PRK00211 sulfur relay protein 23.7 1E+02 0.0023 27.0 3.8 39 85-127 2-41 (119)
352 PRK14494 putative molybdopteri 23.3 1E+02 0.0022 30.5 4.1 38 85-127 1-38 (229)
353 PF00185 OTCace: Aspartate/orn 23.2 80 0.0017 29.2 3.1 37 83-128 1-37 (158)
354 PRK08605 D-lactate dehydrogena 23.1 2.8E+02 0.006 29.1 7.5 44 470-513 194-242 (332)
355 PRK06732 phosphopantothenate-- 23.0 96 0.0021 30.6 3.9 25 100-127 25-49 (229)
356 PLN00198 anthocyanidin reducta 23.0 94 0.002 32.3 4.0 27 101-127 16-42 (338)
357 TIGR00639 PurN phosphoribosylg 22.9 2.4E+02 0.0052 27.0 6.4 34 85-127 1-36 (190)
358 PRK10569 NAD(P)H-dependent FMN 22.7 1.2E+02 0.0026 29.0 4.4 39 85-126 1-39 (191)
359 PRK07364 2-octaprenyl-6-methox 22.6 88 0.0019 33.5 3.8 34 83-127 17-50 (415)
360 PLN00141 Tic62-NAD(P)-related 22.5 94 0.002 30.7 3.8 34 84-127 17-50 (251)
361 PRK10446 ribosomal protein S6 22.4 81 0.0018 32.4 3.4 35 85-127 1-35 (300)
362 PRK04148 hypothetical protein; 22.3 1E+02 0.0022 27.8 3.5 31 84-126 17-47 (134)
363 COG2120 Uncharacterized protei 22.2 94 0.002 30.8 3.6 43 81-130 7-50 (237)
364 COG0718 Uncharacterized protei 22.1 3E+02 0.0065 23.7 6.0 51 500-552 30-80 (105)
365 PRK08229 2-dehydropantoate 2-r 21.9 80 0.0017 33.0 3.2 33 84-127 2-34 (341)
366 PRK13230 nitrogenase reductase 21.8 88 0.0019 31.7 3.4 27 100-126 9-37 (279)
367 PRK06703 flavodoxin; Provision 21.7 1.3E+02 0.0028 27.3 4.2 37 85-126 2-38 (151)
368 COG1922 WecG Teichoic acid bio 21.7 3.6E+02 0.0078 27.1 7.5 99 414-516 91-201 (253)
369 PRK11064 wecC UDP-N-acetyl-D-m 21.3 98 0.0021 33.6 3.8 35 82-127 1-35 (415)
370 COG3349 Uncharacterized conser 21.3 82 0.0018 34.8 3.1 32 85-127 1-32 (485)
371 TIGR03029 EpsG chain length de 21.1 1.4E+02 0.003 30.1 4.7 39 84-126 102-140 (274)
372 PLN02206 UDP-glucuronate decar 21.1 89 0.0019 34.2 3.5 33 83-125 118-150 (442)
373 PRK06719 precorrin-2 dehydroge 21.1 63 0.0014 29.8 2.0 24 104-127 22-45 (157)
374 TIGR01361 DAHP_synth_Bsub phos 21.1 8.5E+02 0.019 24.5 11.2 98 408-508 29-140 (260)
375 PF13614 AAA_31: AAA domain; P 21.1 1.2E+02 0.0026 27.2 3.9 28 100-127 11-38 (157)
376 PRK08177 short chain dehydroge 21.0 95 0.0021 30.0 3.4 34 85-127 1-34 (225)
377 PRK13304 L-aspartate dehydroge 21.0 2.5E+02 0.0055 28.3 6.5 71 431-511 26-96 (265)
378 KOG4117 Heat shock factor bind 21.0 4E+02 0.0086 20.6 7.6 54 535-589 10-63 (73)
379 TIGR03219 salicylate_mono sali 20.8 76 0.0016 34.1 2.9 30 85-125 1-31 (414)
380 PRK05647 purN phosphoribosylgl 20.8 2.3E+02 0.005 27.3 5.9 34 85-127 2-37 (200)
381 PRK00587 hypothetical protein; 20.8 3.1E+02 0.0068 23.3 5.9 48 502-552 28-75 (99)
382 TIGR00853 pts-lac PTS system, 20.8 2.6E+02 0.0057 23.3 5.5 73 434-508 7-83 (95)
383 PF01012 ETF: Electron transfe 20.7 3.3E+02 0.0073 24.8 6.9 91 416-507 16-121 (164)
384 PLN02527 aspartate carbamoyltr 20.6 9E+02 0.02 25.0 10.6 87 389-485 141-227 (306)
385 PHA02519 plasmid partition pro 20.5 1E+02 0.0022 33.2 3.6 38 82-125 103-142 (387)
386 PF09198 T4-Gluco-transf: Bact 20.5 2.1E+02 0.0045 19.1 3.6 36 85-122 1-38 (38)
387 PRK08105 flavodoxin; Provision 20.4 1.2E+02 0.0026 27.7 3.6 28 99-126 11-38 (149)
388 PRK07102 short chain dehydroge 20.3 1E+02 0.0022 30.1 3.4 22 106-127 13-34 (243)
389 cd02032 Bchl_like This family 20.1 1.1E+02 0.0025 30.6 3.8 35 85-127 1-37 (267)
390 PRK07574 formate dehydrogenase 20.1 2.8E+02 0.0061 29.8 6.9 44 470-513 242-290 (385)
391 TIGR03018 pepcterm_TyrKin exop 20.0 1.5E+02 0.0033 28.4 4.5 40 84-127 34-74 (207)
392 KOG1203 Predicted dehydrogenas 20.0 1.9E+02 0.0041 31.3 5.5 42 82-133 77-118 (411)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=1e-68 Score=599.24 Aligned_cols=468 Identities=33% Similarity=0.567 Sum_probs=394.2
Q ss_pred cCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccC-CC----ceEEEEEeCCeeeEEEEE
Q 007247 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DT----DVVIELKVGDKIEKVRFF 155 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~ 155 (611)
+.++|||+||++|+.|+.++||++++++.|+++|++.||+|.||+|.|+.....+ .. .......+++.....+++
T Consensus 478 ~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 557 (977)
T PLN02939 478 TSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIW 557 (977)
T ss_pred CCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEE
Confidence 3568999999999999999999999999999999999999999999998765221 11 112222344445567888
Q ss_pred EeeecCceEEEEeC--c-cchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEE
Q 007247 156 HCHKRGVDRVFVDH--P-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 232 (611)
Q Consensus 156 ~~~~~gv~~~~i~~--~-~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dviv 232 (611)
+...+||++|||++ | .||.+ ..+|+ +.|+..||.+||+++++++..+.+ +|| ||
T Consensus 558 ~~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~----------~PD-II 614 (977)
T PLN02939 558 TGTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSGK----------KPD-II 614 (977)
T ss_pred EEEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC----------CCC-EE
Confidence 88889999999984 3 36665 57886 689999999999999999987754 699 99
Q ss_pred EecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHH
Q 007247 233 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312 (611)
Q Consensus 233 h~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 312 (611)
|||||++++++.+++..+...+ +.++|+|+||||+.|||.|+...+..++++...+... +++... +...+|+++.
T Consensus 615 H~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 615 HCHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKG 689 (977)
T ss_pred EECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHH
Confidence 9999999998555444443333 3678999999999999999988888888887654321 221111 2356899999
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhh--ccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
++..||.|+|||+.+++++.. .+|..++..++ ..++.+|+||+|.+.|+|.++++++.+|++.++ .+|..++..+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aL 766 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAAL 766 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHH
Confidence 999999999999999999986 35555555553 468999999999999999999999999999997 5999999999
Q ss_pred HHHhCCCCC-CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-chhHHHHHHHHHHCC--CceEEecccC
Q 007247 391 QAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFN 466 (611)
Q Consensus 391 ~~~~gl~~~-~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~--~~v~~~~~~~ 466 (611)
++++|++.+ ++.|+|+|+||+.++||++.+++|+..+.+++++|+|+|+|+ ..+++.++.+...++ +++.+.+.++
T Consensus 767 RkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~d 846 (977)
T PLN02939 767 RKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYD 846 (977)
T ss_pred HHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccC
Confidence 999999864 567899999999999999999999998877789999999996 456788888888774 4688888899
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec---------CcceEEecccccccccCCcc
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPV 537 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---------g~~G~l~~~~~~~~~~v~~~ 537 (611)
....+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.+ +.|||+| ++.
T Consensus 847 e~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~ 916 (977)
T PLN02939 847 EALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTP 916 (977)
T ss_pred HHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCC
Confidence 888889999999999999999999999999999999999999999999975 5799998 999
Q ss_pred CHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 538 DVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 538 d~~~la~~i~~ll~~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
|+++++++|.+++..+ +++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 917 D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 917 DEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998743 378889999999999999999999999999999864
No 2
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=3.1e-67 Score=575.08 Aligned_cols=467 Identities=38% Similarity=0.615 Sum_probs=388.7
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCce-EEEEEeCCeeeEEEEEEeeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|++|||+||++|+.|+.++||+++++..|+++|+++||+|.|+.|.|++..+...... ...+.+.. ....++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 5689999999999999999999999999999999999999999999998754433321 12222110 114677788889
Q ss_pred CceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccc
Q 007247 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (611)
Q Consensus 161 gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~ 240 (611)
||+++|+++|.||.| .+.+|++..|.+|.||..||.+||++++++++.+.. .++|| |||+|||+++
T Consensus 80 ~v~~~~~~~~~~f~r-----~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~--------~~~pD-IiH~Hdw~~~ 145 (485)
T PRK14099 80 GLDLFVLDAPHLYDR-----PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP--------GFVPD-IVHAHDWQAG 145 (485)
T ss_pred CceEEEEeChHhhCC-----CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc--------CCCCC-EEEECCcHHH
Confidence 999999999999886 124898888888999999999999999998876521 13699 9999999999
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
++|.+++.... .++|+|+|+||..+|+.|+...+..++++...+.. ++.. +.+.+++++.++..||.|
T Consensus 146 l~~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 146 LAPAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGVE---YYGGIGYLKAGLQLADRI 213 (485)
T ss_pred HHHHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhhh---hCCCccHHHHHHHhcCee
Confidence 99998874221 36899999999999999987777777777655431 1111 123457899999999999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 398 (611)
+|||+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+..+|+..++ .+|..++..+++++|++.
T Consensus 214 itVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 291 (485)
T PRK14099 214 TTVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLDP 291 (485)
T ss_pred eecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCCc
Confidence 9999999999985 22344333333 2358999999999999999999999999999876 577788899999999987
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 399 ~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+++.++|+++||+.++||++.|++|++++.+++++|+|+|+|+..+++.++++..++++++..+.+++.++.+.++++||
T Consensus 292 ~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aD 371 (485)
T PRK14099 292 DPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGAD 371 (485)
T ss_pred ccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCC
Confidence 66788999999999999999999999999877899999999987788899999888887775566677666655567899
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC---------cceEEecccccccccCCccCHHHHHHHHHH-
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR- 548 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~- 548 (611)
++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.+
T Consensus 372 ifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~a 441 (485)
T PRK14099 372 ALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRKT 441 (485)
T ss_pred EEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999875 689987 99999999999998
Q ss_pred --HHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 549 --ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 549 --ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
++++ ++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 442 ~~l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 442 AALFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HHHhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Confidence 4444 77889999999999999999999999999999753
No 3
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-66 Score=571.43 Aligned_cols=468 Identities=29% Similarity=0.575 Sum_probs=391.9
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCccccc-CCC-c----eEEEEEeCCeeeEEEEEEe
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT-D----VVIELKVGDKIEKVRFFHC 157 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~-~~~-~----~~~~~~~~~~~~~~~~~~~ 157 (611)
+|||+||++|+.|+.|+||+++++..|+++|+++||+|.|+.|.|+...+. +.. . ..+.+.++......+....
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 399999999999999999999999999999999999999999999887653 111 1 1222333332223333222
Q ss_pred ee--cCceEEEEeCccchhhhcCCCCccccCCC-CCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEe
Q 007247 158 HK--RGVDRVFVDHPWFLAKVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVA 234 (611)
Q Consensus 158 ~~--~gv~~~~i~~~~~~~~~~~~~~~~iy~~~-~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~ 234 (611)
.. .||++++++++.||.| ..+|+.. .|.+|.||..||.+||++++++++.+.+ +|| |||+
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~----------~pD-iiH~ 147 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW----------KPD-IIHC 147 (489)
T ss_pred cccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEe
Confidence 23 3799999999999987 6799876 6788999999999999999999887654 699 9999
Q ss_pred cCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHh
Q 007247 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 314 (611)
Q Consensus 235 hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 314 (611)
|||+++++|.+++..+.....+.++|+|+|+||..+||.++...+..+ ++..+...+. .....+++++.++
T Consensus 148 hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~--------~~~~~~n~lk~~i 218 (489)
T PRK14098 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH--------REGDEVNMLYTGV 218 (489)
T ss_pred cCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh--------hcCCcccHHHHHH
Confidence 999999999999876644444568999999999999998876555443 4433321110 0124578999999
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhh--ccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHH
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (611)
..||.|+|||+.+++++.....+|..++..++ ..++.+|+||+|.+.|+|.+++.+..+|++.++ ++|..++..+++
T Consensus 219 ~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~~ 297 (489)
T PRK14098 219 EHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALLE 297 (489)
T ss_pred HhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHHH
Confidence 99999999999999999752233433444443 358999999999999999999999999999876 577788999999
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHH
Q 007247 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (611)
Q Consensus 393 ~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (611)
++|++.+++.++|+++||+.++||++.+++|++++.+++++|+|+|+|+..+++.++++..++++++.+.+.++.++++.
T Consensus 298 ~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~ 377 (489)
T PRK14098 298 EVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377 (489)
T ss_pred HhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHH
Confidence 99999888889999999999999999999999999878999999999987788899999998888899999999999999
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec----CcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
++++||++++||++|+||++++|||+||+|||++++||+.|++.+ +++|+++ ++.|+++++++|.+
T Consensus 378 ~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~~ 447 (489)
T PRK14098 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLGE 447 (489)
T ss_pred HHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999874 6899987 99999999999999
Q ss_pred HHHhc-CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 549 ALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 549 ll~~~-~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+++.+ +++.+.+++++++.++|||+.++++|+++|++++.
T Consensus 448 ~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 448 ALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence 87543 26788899999899999999999999999998864
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=5.7e-63 Score=543.82 Aligned_cols=459 Identities=45% Similarity=0.773 Sum_probs=392.1
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCC----ceEEEEEeCCeeeEEEEEEeeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|||++|++|++|+.++||+++++..|+++|+++||+|.|++|.|+...+.+.. .....+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999999887654432 23445566777778888898899
Q ss_pred CceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccc
Q 007247 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (611)
Q Consensus 161 gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~ 240 (611)
|+++++++++.++.+ .+.+|++ +|.++..||.+|+++++++++.+.+ +|| |||+|||+++
T Consensus 81 ~v~~~~i~~~~~~~r-----~~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~----------~~D-iiH~hdw~~~ 140 (473)
T TIGR02095 81 GVPVYFIDNPSLFDR-----PGGIYGD----DYPDNAERFAFFSRAAAELLSGLGW----------QPD-VVHAHDWHTA 140 (473)
T ss_pred CceEEEEECHHHcCC-----CCCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCcHHH
Confidence 999999999987764 1247865 6899999999999999999887643 699 9999999999
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
+++.+++..++. .++|+|+|+|+..+++.++...+..++++..++.. ..+. ....+++++.++..||.|
T Consensus 141 ~~~~~l~~~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 141 LVPALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGLE---FYGRVNFLKGGIVYADRV 209 (473)
T ss_pred HHHHHHHhhccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhhh---cCCchHHHHHHHHhCCcC
Confidence 999999876521 14899999999999999887777666766544321 1111 113578999999999999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 398 (611)
++||+.+++++... .+|..++..+ +..++.+|+||+|.+.|+|.+++++..+|+..++ ..+...+..+++++|++.
T Consensus 210 ~tVS~~~~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 287 (473)
T TIGR02095 210 TTVSPTYAREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPV 287 (473)
T ss_pred eecCHhHHHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCc
Confidence 99999999998752 3444443322 2458999999999999999999999999998765 466667889999999987
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 399 ~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+.+.++.+.++.++++||
T Consensus 288 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (473)
T TIGR02095 288 DDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD 367 (473)
T ss_pred cCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCC
Confidence 66789999999999999999999999999877899999999987788899999988888888888899998889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC------cceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++.
T Consensus 368 v~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~~ 437 (473)
T TIGR02095 368 FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALRL 437 (473)
T ss_pred EEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 899987 999999999999999883
Q ss_pred c--CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 553 Y--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 553 ~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
+ +++.+.+|+++++.++|||+.++++|+++|+++
T Consensus 438 ~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 438 YRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 3 267889999999989999999999999999864
No 5
>PLN02316 synthase/transferase
Probab=100.00 E-value=3.6e-62 Score=556.55 Aligned_cols=435 Identities=33% Similarity=0.559 Sum_probs=364.6
Q ss_pred cccccCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEE
Q 007247 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFH 156 (611)
Q Consensus 77 ~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
+......+|||+||++|++|+.++||+++++..|+++|+++||+|.|++|.|+...............+......+++++
T Consensus 580 g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 659 (1036)
T PLN02316 580 GGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWF 659 (1036)
T ss_pred CCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEE
Confidence 44455678999999999999999999999999999999999999999999998653322111111122222223567788
Q ss_pred eeecCceEEEEeCc-cchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEec
Q 007247 157 CHKRGVDRVFVDHP-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 235 (611)
Q Consensus 157 ~~~~gv~~~~i~~~-~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~h 235 (611)
...+||++++++++ .+|.+ ..+|+ |.|+..||.+||++++++++.+.+ +|| |||+|
T Consensus 660 ~~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~----------~PD-IIHaH 716 (1036)
T PLN02316 660 GKVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSGF----------HPD-IIHCH 716 (1036)
T ss_pred EEECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEEC
Confidence 88899999999976 36554 45775 789999999999999999887654 699 99999
Q ss_pred CCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhh
Q 007247 236 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 315 (611)
Q Consensus 236 d~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 315 (611)
||++++++.+++..++..+ +.++|+|+|+|++.++. +.++.++.
T Consensus 717 DW~talva~llk~~~~~~~-~~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l~ 760 (1036)
T PLN02316 717 DWSSAPVAWLFKDHYAHYG-LSKARVVFTIHNLEFGA-----------------------------------NHIGKAMA 760 (1036)
T ss_pred CChHHHHHHHHHHhhhhhc-cCCCCEEEEeCCcccch-----------------------------------hHHHHHHH
Confidence 9999999999987654333 26789999999865421 34667889
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhC
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 395 (611)
.+|.|+|||+.+++++... ..+.. +..++.+|+||+|++.|+|.++++++.+|++.++..+|...+..+++++|
T Consensus 761 ~AD~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG 834 (1036)
T PLN02316 761 YADKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG 834 (1036)
T ss_pred HCCEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC
Confidence 9999999999999998752 12211 12489999999999999999999999999999988888888999999999
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-chhHHHHHHHHHH----CCCceEEecccChHHH
Q 007247 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEIL----YPEKARGVAKFNIPLA 470 (611)
Q Consensus 396 l~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~----~~~~v~~~~~~~~~~~ 470 (611)
++. ++.|+|+|+|||.++||++.|++|+.++.+.+++|+|+|+|+ ..+++.+++++.. +++++.+.+.++..+.
T Consensus 835 L~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~la 913 (1036)
T PLN02316 835 LKQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLS 913 (1036)
T ss_pred CCc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHH
Confidence 983 357899999999999999999999999877789999999995 3466777777774 4567888888888888
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC-------------cceEEecccccccccCCcc
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDPV 537 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g-------------~~G~l~~~~~~~~~~v~~~ 537 (611)
+.+|++||++|+||++|+||++++|||+||+|||++++||+.|+|.++ .|||+| ++.
T Consensus 914 h~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~ 983 (1036)
T PLN02316 914 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGA 983 (1036)
T ss_pred HHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCC
Confidence 889999999999999999999999999999999999999999999884 699998 999
Q ss_pred CHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 538 DVAAVSTTVRRALATY-G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 538 d~~~la~~i~~ll~~~-~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
|+++++.+|.+++.++ + +..+.+++++++.++|||+.++++|+++|+++.
T Consensus 984 d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 984 DAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 9999999999999875 2 355688899999999999999999999999875
No 6
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=5.8e-62 Score=534.06 Aligned_cols=453 Identities=41% Similarity=0.682 Sum_probs=376.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCC-ceEEEEEeCCeeeEEEEEEe--eecC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIELKVGDKIEKVRFFHC--HKRG 161 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~g 161 (611)
|||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.... ....++ +..+++.. ..+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 89999999999999999999999999999999999999999999876543211 111111 12333333 4589
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccch
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~ 241 (611)
+++++++++.++.+ ..+|+ |.++..||.+|+++++++++.+.+ +|| |||+|||++++
T Consensus 75 v~v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~~ 131 (466)
T PRK00654 75 VPVYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTGL 131 (466)
T ss_pred ceEEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHHH
Confidence 99999999988876 46776 788999999999999999887753 699 99999999999
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (611)
++.+++..+ ..+ +.++|+|+|+|+..++|.++...+..++++..++. .+... .....++++.++..||.|+
T Consensus 132 ~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~vi 202 (466)
T PRK00654 132 IPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRVT 202 (466)
T ss_pred HHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcCe
Confidence 999998764 222 35789999999999999888776766777655432 11111 1134688999999999999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
++|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+..+|+..++ +++...+..+++++|++.
T Consensus 203 tvS~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~- 279 (466)
T PRK00654 203 TVSPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPD- 279 (466)
T ss_pred eeCHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCC-
Confidence 999999999875 12332222222 2458999999999999999999889999988775 477778889999999983
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
++.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+++.++++..+++.++.....++.+..+.++++||+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 35689999999999999999999999998779999999999877888999999998877777777888888889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecC------cceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
+++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ +++|+++++++|.++++.+
T Consensus 360 ~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~~ 429 (466)
T PRK00654 360 FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALELY 429 (466)
T ss_pred EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999988 899987 9999999999999998754
Q ss_pred C-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 554 G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 554 ~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
. ++.+.+|+++++.++|||+.++++|+++|++++.
T Consensus 430 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 430 RQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred cCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 2 5668899999988999999999999999998864
No 7
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.4e-58 Score=509.78 Aligned_cols=462 Identities=44% Similarity=0.745 Sum_probs=385.8
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceE----EEEEeCCeeeEEEEEEeeecC
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (611)
||+||++|++|+.++||+++++..|+++|+++||+|+|++|.|+...+.+..... ..+..++....++..+...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 7999999999999999999999999999999999999999999987665443222 223455566778888888999
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccch
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~ 241 (611)
|+++++++|.++.+ ..+| +..+.+|.++..+|.+|+++++++++.+.. +|| |||+|||++++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~----------~pD-viH~hd~~t~~ 142 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW----------KPD-IIHCHDWHTGL 142 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC----------CCc-EEEECchHHHH
Confidence 99999999988875 3444 444556889999999999999999887643 699 99999999999
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (611)
++.+++..+.. ..+.++|+|+|+|+..+++.++...+...+.+..... .... .......++++.++..||.|+
T Consensus 143 ~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~ad~v~ 215 (476)
T cd03791 143 VPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELF---HIDG---LEFYGQVNFLKAGIVYADAVT 215 (476)
T ss_pred HHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchh---hhcc---cccCCcccHHHHHHHhcCcCe
Confidence 99999876533 2335899999999999999887665544443321000 0111 112245688999999999999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhh--hccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
++|+.+++++.+ ..+|..++..+ +..++.+|+||+|.+.|.|..++.+...|+.. ....+...+..+++++|++.+
T Consensus 216 ~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~-~~~~~~~~k~~l~~~~g~~~~ 293 (476)
T cd03791 216 TVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSAD-DLEGKAENKAALQEELGLPVD 293 (476)
T ss_pred ecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcc-ccccHHHHHHHHHHHcCCCcC
Confidence 999999999875 22333333333 23589999999999999999888888888854 446777888999999999866
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
++.++|+|+||+.++||++.++++++++.+.+++|+|+|+|+..+++.++++..++++++.+...++.+..+.++++||+
T Consensus 294 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 294 PDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 78899999999999999999999999998777999999999877888899998887778888888888888899999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCc------ceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~------~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
+++||++|+||++++|||+||+|||++++||+.|+|.++. +|+++ ++.|+++++++|.++++.+
T Consensus 374 ~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~~ 443 (476)
T cd03791 374 FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALALY 443 (476)
T ss_pred EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 99987 9999999999999999865
Q ss_pred C-HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 554 G-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 554 ~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
. ++.+.+++++++.+.|||+.++++|+++|+
T Consensus 444 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 444 RDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred cCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 3 678899999999999999999999999996
No 8
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-58 Score=495.76 Aligned_cols=464 Identities=39% Similarity=0.640 Sum_probs=398.9
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCc----eEEEEEeCCeeeEEEEEEeeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|||+++++|+.|..++||+++++..|+++|++.||+|.|+.|.|+...+.|... ....+..++........+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999999777766653 2233334443333333333333
Q ss_pred -CceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc
Q 007247 161 -GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (611)
Q Consensus 161 -gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~ 239 (611)
|++.++++++.++.|- ....| .|.|+.+||..|++++.+........ ..|| |||+||||+
T Consensus 81 ~~v~~~lid~~~~f~r~----~~~~~------~~~d~~~Rf~~F~~a~~~~~~~~~~~--------~~pD-IvH~hDWqt 141 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----DSTLY------GYYDNAERFAFFSLAAAELAPLGLIS--------WLPD-IVHAHDWQT 141 (487)
T ss_pred CCCcEEEecChhhcCcc----ccccC------CCCcHHHHHHHHHHHHHHHhhhcCCC--------CCCC-EEEeecHHH
Confidence 3999999998888751 12333 48999999999999999988665410 2599 999999999
Q ss_pred chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccE
Q 007247 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 319 (611)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 319 (611)
+++|.+++..+. + ...+|.|||+||+.+||.|+......+++|..++..+ ....+ ..++++|.++..||.
T Consensus 142 ~L~~~~lk~~~~--~-~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~-~l~~~------~~~~~lK~gi~~ad~ 211 (487)
T COG0297 142 GLLPAYLKQRYR--S-GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASF-GLEFY------GQISFLKGGLYYADA 211 (487)
T ss_pred HHHHHHHhhccc--c-cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhc-eeeec------CcchhhhhhheeccE
Confidence 999999998641 1 1589999999999999999977778999998765521 11111 346899999999999
Q ss_pred EEecCHHHHHHHHcCcCCCcccchhhh--ccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007247 320 VLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 397 (611)
Q Consensus 320 vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ 397 (611)
|.+||+.+++++. ...+|..++..++ ..++.+|.||+|...|+|.+++++..+|+..+.. +|..++..++.++|++
T Consensus 212 vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL~ 289 (487)
T COG0297 212 VTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGLD 289 (487)
T ss_pred EEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCCC
Confidence 9999999999998 3667777666664 3688999999999999999999999999999886 5889999999999999
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHc
Q 007247 398 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 398 ~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 477 (611)
.+.+.|++.++|||..|||+|.+++++..+.+..++++++|+|+..+++.+..++..+++++.....++.+..+.++++|
T Consensus 290 ~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~aga 369 (487)
T COG0297 290 VDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGA 369 (487)
T ss_pred CCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcC
Confidence 88888999999999999999999999999999889999999999899999999999999989999999999999999999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec--------CcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--------g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
|++++||++||||+++++||++|+++|+..+||++|+|.+ ..|||+| .+.++++++.+|.++
T Consensus 370 D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~rA 439 (487)
T COG0297 370 DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRRA 439 (487)
T ss_pred CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986 5899998 888999999999999
Q ss_pred HHhcC-HHH-HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 550 LATYG-TQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 550 l~~~~-~~~-~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+.-+. ++. ++.+..++|..+|||+..+++|.++|+.++..
T Consensus 440 ~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 440 LVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred HHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhcc
Confidence 98764 344 88889999999999999999999999999864
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=3.4e-39 Score=357.13 Aligned_cols=473 Identities=18% Similarity=0.240 Sum_probs=363.9
Q ss_pred EEEEeeeec-----CccccccHHHHhccchHHHHhCCCeEEEEeecCCcc--c-------------ccCC-------C--
Q 007247 87 ILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY--K-------------DAWD-------T-- 137 (611)
Q Consensus 87 Il~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~--~-------------~~~~-------~-- 137 (611)
|++++.||. |. ..||+|.......++++..|...+.++..|... . +.|+ .
T Consensus 1 ~ayf~~E~g~~~~~p~-ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLPI-YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 455666654 42 579999999999999999999999999876421 0 1121 1
Q ss_pred -----ceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchhhhcCCCCc-cccCCCCCCCCcchHHHHHHHHHHHHHhh
Q 007247 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAP 211 (611)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~-~iy~~~~~~~~~~~~~r~~~~~~~~~~~~ 211 (611)
...+++++.+....++.+.....++++++++++..-...+.+... .+|++ |...+..++.+|+.+.++++
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l 155 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRAL 155 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHH
Confidence 123667777777888998888889999999988622122222322 46762 23445556699999999999
Q ss_pred HHhccCCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCCC-----C--CCceEEEEEecCccccc--cCccccc--
Q 007247 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDFG-- 280 (611)
Q Consensus 212 ~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~-----~--~~~k~v~~iH~~~~~~~--~~~~~~~-- 280 (611)
+.+.+ +|| |||+||||++++++.+.+.....+. + .+.+++||+|+..+||. |+...+.
T Consensus 156 ~~l~~----------~pd-viH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~ 224 (601)
T TIGR02094 156 RALGI----------DPD-VYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKY 224 (601)
T ss_pred HHcCC----------Cce-EEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHH
Confidence 88764 599 9999999999999987443111110 1 14789999999999997 9877763
Q ss_pred ------ccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhh--hccceeE
Q 007247 281 ------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKG 352 (611)
Q Consensus 281 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~v 352 (611)
.++++...+....... +-....+++++.++..||.|.+||+.+.+..... ++ ++.+.+ +..++..
T Consensus 225 ~~~~~~~~gl~~~~~~~~~~~~----~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l--~~-~l~~~~~~~~~~i~g 297 (601)
T TIGR02094 225 FGDYAANLGLPREQLLALGREN----PDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKM--WQ-FLYPGYEEEEVPIGY 297 (601)
T ss_pred hhhhhhHhCCCHHHHHhhhhhc----cCccCceeHHHHHHHhCCeeeeecHHHHHHHHHH--HH-hhhhhcccccCCccc
Confidence 3566655433221111 1001357999999999999999999999843320 11 111111 1236899
Q ss_pred eeCCcccCCcCCCCccccccccCcch---------------------hhhccHHHHHHHHH-------------------
Q 007247 353 IVNGMDVQEWNPLTDKYIGVKYDAST---------------------VMDAKPLLKEALQA------------------- 392 (611)
Q Consensus 353 I~Ngvd~~~~~p~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~------------------- 392 (611)
|.||||...|.|.+++.+..+|+..+ +.+.|..+|.++++
T Consensus 298 ItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 377 (601)
T TIGR02094 298 VTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAI 377 (601)
T ss_pred eeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchh
Confidence 99999999999999999999999877 34788888988888
Q ss_pred --HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCCch------hHHHHHHHHHH--CC
Q 007247 393 --EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YP 456 (611)
Q Consensus 393 --~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~~--~~ 456 (611)
++|++.+++.+++++++|+.++||++++++++.++.+ .++|||++|++.+. +++.+.+++.. ++
T Consensus 378 ~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 378 LMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCC
Confidence 5788888899999999999999999999999888863 48999999999854 89999999988 88
Q ss_pred CceEEecccChHHHHHHHHHccEEEe-CCC-CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecc--cccccc
Q 007247 457 EKARGVAKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS--FSVDCE 532 (611)
Q Consensus 457 ~~v~~~~~~~~~~~~~i~~~aDv~l~-pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~--~~~~~~ 532 (611)
+++.++..|+.++++.++++||++++ ||+ +|+||+..+-||..|.+.+++-.|+..|.. ++.|||.||. ...+.+
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccc
Confidence 89999999999999999999999999 999 999999999999999999999999999987 6789999962 111222
Q ss_pred cCCccCHHHHHHHHHHHH-Hhc-C------HHHHHHHHHHHHHh---hCCchHHHHHHHHHH
Q 007247 533 AVDPVDVAAVSTTVRRAL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETL 583 (611)
Q Consensus 533 ~v~~~d~~~la~~i~~ll-~~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~~~ 583 (611)
..+..|.++|-++|++.+ .-+ + +..+.++.+++|.. .|||+.++++|.++|
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 234689999999998877 322 1 45699999999987 899999999999887
No 10
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=6.6e-39 Score=365.11 Aligned_cols=453 Identities=18% Similarity=0.150 Sum_probs=290.3
Q ss_pred ccCCCceEEEEeeeecC---------ccccccHHHHhccchHHHHhCC--CeEEEEeecCCcccccCCCceEEEEEeCCe
Q 007247 80 VCGVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK 148 (611)
Q Consensus 80 ~~~~~MkIl~v~~~~~P---------~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~~~~~~~~~~~~~~~~~~~~~~ 148 (611)
...++|.|++|+.+-.| ...+||...|+.+||++|+++| |+|.++|.......-.|+.....+..-...
T Consensus 165 ~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~ 244 (1050)
T TIGR02468 165 QKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRS 244 (1050)
T ss_pred cccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccc
Confidence 34568999999875332 2367999999999999999999 999999987542221222222221110000
Q ss_pred eeEEEEEEeeecCceEEEEeCcc---chhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHH----hccCCCCC
Q 007247 149 IEKVRFFHCHKRGVDRVFVDHPW---FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRI----LNLNSNKY 221 (611)
Q Consensus 149 ~~~~~~~~~~~~gv~~~~i~~~~---~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~----l~~~~~~~ 221 (611)
.+..........|+.++.+.... ++.| ...+.....|...+++.++. |..+ .
T Consensus 245 ~~~~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~---~ 303 (1050)
T TIGR02468 245 SENDGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGEQ---I 303 (1050)
T ss_pred cccccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhh---h
Confidence 00001111123577777765321 2222 01122334455555544332 1100 0
Q ss_pred CCC-CCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCC
Q 007247 222 FSG-PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300 (611)
Q Consensus 222 ~~~-~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (611)
-.| +..|| |||+|+|..+.++..++..+ ++|+|+|.|.+.-...- ..+........ .....|.
T Consensus 304 ~~~~~~~pD-vIHaHyw~sG~aa~~L~~~l-------gVP~V~T~HSLgr~K~~-----~ll~~g~~~~~--~~~~~y~- 367 (1050)
T TIGR02468 304 GSGHPVWPY-VIHGHYADAGDSAALLSGAL-------NVPMVLTGHSLGRDKLE-----QLLKQGRMSKE--EINSTYK- 367 (1050)
T ss_pred ccccCCCCC-EEEECcchHHHHHHHHHHhh-------CCCEEEECccchhhhhh-----hhccccccccc--ccccccc-
Confidence 000 11389 99999999999999999874 89999999975321100 00000000000 0000000
Q ss_pred CCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCC-ccc--chhhh-------------ccceeEeeCCcccCCcCC
Q 007247 301 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG-VEL--DNIIR-------------KTGIKGIVNGMDVQEWNP 364 (611)
Q Consensus 301 ~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g-~~~--~~~~~-------------~~~i~vI~Ngvd~~~~~p 364 (611)
..+.+..++..+..||.||++|+..++++... |+ .++ ...++ ..++.|||||+|+..|.|
T Consensus 368 --~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~l--Y~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P 443 (1050)
T TIGR02468 368 --IMRRIEAEELSLDASEIVITSTRQEIEEQWGL--YDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVP 443 (1050)
T ss_pred --hHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHH--hccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccC
Confidence 11344566788999999999999999876653 22 111 01111 128999999999999988
Q ss_pred CCccccccccCcc-hhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc----CCcEEEEEeC
Q 007247 365 LTDKYIGVKYDAS-TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGT 439 (611)
Q Consensus 365 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~----~~~~lvivG~ 439 (611)
.....-....... ......+.....+++.+. + +++++|+|+||+.++||++.||+|+.++.+ +++. +|+|.
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~-~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~ 519 (1050)
T TIGR02468 444 HDGDMDGETEGNEEHPAKPDPPIWSEIMRFFT-N--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGN 519 (1050)
T ss_pred CCccccchhcccccccccccchhhHHHHhhcc-c--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEec
Confidence 5321000000000 000000111223343332 2 366899999999999999999999999863 3565 46687
Q ss_pred CCc---------hhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHc----cEEEeCCCCCCCcHHHHHHHHcCCceE
Q 007247 440 GKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPI 504 (611)
Q Consensus 440 g~~---------~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a----Dv~l~pS~~E~~gl~~lEAma~G~PvI 504 (611)
++. .+...+..+..++. ++|.+.+..+.+.+..+|+.| |+|++||.+|+||++++|||+||+|||
T Consensus 520 gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVV 599 (1050)
T TIGR02468 520 RDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMV 599 (1050)
T ss_pred CchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEE
Confidence 642 12344556665554 567766666777788899887 699999999999999999999999999
Q ss_pred EcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHH
Q 007247 505 VASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 582 (611)
Q Consensus 505 ~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (611)
+|+.||+.|+|.++.+|+++ ++.|+++|+++|.+++++ ++.+.+|++++. .++|||+.++++|++.
T Consensus 600 ASdvGG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~~ 667 (1050)
T TIGR02468 600 ATKNGGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLSR 667 (1050)
T ss_pred EeCCCCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99999999999999999987 999999999999999998 777788887764 4689999999999999
Q ss_pred HHHHHHc
Q 007247 583 LLNLEVA 589 (611)
Q Consensus 583 ~~~l~~~ 589 (611)
+..+...
T Consensus 668 i~~~~~~ 674 (1050)
T TIGR02468 668 IASCRPR 674 (1050)
T ss_pred HHHHhcc
Confidence 9988753
No 11
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=9.4e-39 Score=345.61 Aligned_cols=396 Identities=17% Similarity=0.193 Sum_probs=274.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++|+..|+|. .||++.++.+|+++|.++||+|+|+|+. +.+.. |..... ...........+|+.+
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~-~~~~~-~~~~~~--------~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAP-PYYPQ-WRVGEG--------YSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecC-CCCCC-CCCCcc--------cccccceeeecCCeEE
Confidence 8999999988886 7999999999999999999999999976 11111 100000 0001112223457777
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHH-hhHHhccCCCCCCCCCCCCCeEEEecCCcc--ch
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALE-APRILNLNSNKYFSGPYGEDVVFVANDWHT--SL 241 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~--~~ 241 (611)
+++........ . ..........|...... +.+.+. .+|| |||+|.+.. ..
T Consensus 69 ~r~~~~~~~~~---------~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~~ 121 (412)
T PRK10307 69 WRCPLYVPKQP---------S-------GLKRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCAP 121 (412)
T ss_pred EEccccCCCCc---------c-------HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHHH
Confidence 76632110000 0 00011111112222221 222221 1699 899986443 23
Q ss_pred HHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCC-cccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
.+..+++. .++|+++++|+..++..+. .+.. ..+ .......+++..++.+|.|
T Consensus 122 ~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~~~~~ad~i 175 (412)
T PRK10307 122 GARLLARL-------SGARTWLHIQDYEVDAAFG------LGLLKGGK-------------VARLATAFERSLLRRFDNV 175 (412)
T ss_pred HHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCccCcH-------------HHHHHHHHHHHHHhhCCEE
Confidence 33444443 4789999999754321110 0000 000 0001123456778899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|+...+.+.+ ++.+.+ ++.+||||+|.+.|.|.... ....++++++++.
T Consensus 176 i~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~-- 227 (412)
T PRK10307 176 STISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD-- 227 (412)
T ss_pred EecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC--
Confidence 9999999999875 454433 89999999999888664321 1234677788763
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCC-CceEEecccChHHHHHHHHHcc
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+.++|+|+|++.+.||++.|++|++++.+ ++++|+|+|+|+ ..+.++++...++ .++.+.+..+.+.+..+++.||
T Consensus 228 ~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aD 305 (412)
T PRK10307 228 GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMAD 305 (412)
T ss_pred CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcC
Confidence 45799999999999999999999998865 679999999997 4566776666443 3588888778888889999999
Q ss_pred EEEeCCCCCC----CcHHHHHHHHcCCceEEcCCcc--cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
++++||..|+ +|.+++|||+||+|||+|+.|| +.|++. ++|+++ +++|+++++++|.+++++
T Consensus 306 i~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~~ 373 (412)
T PRK10307 306 CHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALARQ 373 (412)
T ss_pred EeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHhC
Confidence 9999999998 5778999999999999999876 457776 589987 999999999999999987
Q ss_pred cCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHHHc
Q 007247 553 YGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+..+.+|++++. .++|||+.++++|+++|++++.+
T Consensus 374 --~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 374 --ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 666677776664 57899999999999999998753
No 12
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.2e-38 Score=347.32 Aligned_cols=391 Identities=19% Similarity=0.181 Sum_probs=255.7
Q ss_pred ccccHHHHhccchHHHHhCCC--eEEEEeecCCccc--ccCCCceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchh
Q 007247 99 KTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174 (611)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh--~V~vit~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~ 174 (611)
..||++.++.+|+++|+++|| +|+|+|..++... ..+. .......+|++++.+.....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~~~-- 85 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFGPR-- 85 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCCCC--
Confidence 479999999999999999997 9999997654211 1000 00122346787777643110
Q ss_pred hhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCC
Q 007247 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKG 254 (611)
Q Consensus 175 ~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~ 254 (611)
.+.. ..+-...+..+...+.+.++... .+|| |||+|+|..++++..++..
T Consensus 86 ---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~----------~~~D-vIH~h~~~~~~~~~~~~~~----- 135 (439)
T TIGR02472 86 ---------RYLR-----KELLWPYLDELADNLLQHLRQQG----------HLPD-LIHAHYADAGYVGARLSRL----- 135 (439)
T ss_pred ---------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC----------CCCC-EEEEcchhHHHHHHHHHHH-----
Confidence 0100 00001111234444455444321 1599 9999998877777776665
Q ss_pred CCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcC
Q 007247 255 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG 334 (611)
Q Consensus 255 ~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~ 334 (611)
.++|+|+|.|+...... ..+...++.... +...+ .....+.+++..++.+|.|+++|+.........
T Consensus 136 --~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 202 (439)
T TIGR02472 136 --LGVPLIFTGHSLGREKR---RRLLAAGLKPQQ-----IEKQY---NISRRIEAEEETLAHASLVITSTHQEIEEQYAL 202 (439)
T ss_pred --hCCCEEEecccccchhh---hhcccCCCChhh-----hhhhc---chHHHHHHHHHHHHhCCEEEECCHHHHHHHHHh
Confidence 47899999996432100 000000000000 00000 001122345678889999999998655443210
Q ss_pred cCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccc
Q 007247 335 EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 414 (611)
Q Consensus 335 ~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~ 414 (611)
..+++. .++.+||||+|.+.|.|.... ......+..+ ++.+.+ ++.++|+|+||+.+.
T Consensus 203 -~~~~~~------~ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~~ 260 (439)
T TIGR02472 203 -YDSYQP------ERMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKD--PEKPPILAISRPDRR 260 (439)
T ss_pred -ccCCCc------cceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhccc--cCCcEEEEEcCCccc
Confidence 123333 389999999999988765321 0001111222 233333 245799999999999
Q ss_pred cCHHHHHHHHHhccc--CCcEEE-EEeCCCc--hh-------HHHHHHHHHH--CCCceEEecccChHHHHHHHHHc---
Q 007247 415 KGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGA--- 477 (611)
Q Consensus 415 Kg~d~li~a~~~l~~--~~~~lv-ivG~g~~--~~-------~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~a--- 477 (611)
||++.|++|++++.. ++.+++ |+|+|+. .+ .+.+..+..+ +.+++.+.+.++.+.+..+|+.|
T Consensus 261 Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~ 340 (439)
T TIGR02472 261 KNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARS 340 (439)
T ss_pred CCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence 999999999986522 234443 5687652 11 1223333443 33567776666777788899877
Q ss_pred -cEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 478 -DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 478 -Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
|++++||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++|+++++++|.+++++ +.
T Consensus 341 ~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~ 408 (439)
T TIGR02472 341 RGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--SS 408 (439)
T ss_pred CCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--HH
Confidence 99999999999999999999999999999999999999999999987 999999999999999998 66
Q ss_pred HHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 557 ALAEMMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 557 ~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
.+.+|++++ +.++|||+.++++|+++++
T Consensus 409 ~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 409 QWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 666676665 4689999999999998863
No 13
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1e-38 Score=344.27 Aligned_cols=387 Identities=20% Similarity=0.261 Sum_probs=273.6
Q ss_pred EEEEeeeecCcc-----ccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecC
Q 007247 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 87 Il~v~~~~~P~~-----~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (611)
|++++....|+. ..||.+.++.+|+++|+++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 567777766652 259999999999999999999999999763211110 0011245
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHH-HhhHHhccCCCCCCCCCCCCCeEEEecCCccc
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~ 240 (611)
+.++.+....+... ........+..|....+ .+++... .++| |||+|+|..+
T Consensus 61 ~~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iih~h~~~~~ 113 (405)
T TIGR03449 61 VRVRNVVAGPYEGL----------------DKEDLPTQLCAFTGGVLRAEARHEP----------GYYD-LIHSHYWLSG 113 (405)
T ss_pred cEEEEecCCCcccC----------------CHHHHHHHHHHHHHHHHHHHhhccC----------CCCC-eEEechHHHH
Confidence 66655432211110 00000011111222222 2222211 2599 8999998877
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
+++.++++. .++|+|+|+|+...... ..+.....+. ......+.+..+..+|.+
T Consensus 114 ~~~~~~~~~-------~~~p~v~t~h~~~~~~~---~~~~~~~~~~----------------~~~~~~~e~~~~~~~d~v 167 (405)
T TIGR03449 114 QVGWLLRDR-------WGVPLVHTAHTLAAVKN---AALADGDTPE----------------PEARRIGEQQLVDNADRL 167 (405)
T ss_pred HHHHHHHHh-------cCCCEEEeccchHHHHH---HhccCCCCCc----------------hHHHHHHHHHHHHhcCeE
Confidence 777666654 47899999996532100 0000000000 001112335678899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|+...+.+.. .++.+.+ ++.+|+||+|.+.|.+.+ +...+++++++.
T Consensus 168 i~~s~~~~~~~~~--~~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~-- 217 (405)
T TIGR03449 168 IANTDEEARDLVR--HYDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL-- 217 (405)
T ss_pred EECCHHHHHHHHH--HcCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC--
Confidence 9999998888764 2444433 899999999998886542 334567777753
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc--CC--cEEEEEeCCCc---hhHHHHHHHHHHCC--CceEEecccChHHHH
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~--~~lvivG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (611)
+.++|+|+||+.+.||++.+++|++++.+ ++ ++|+|+|++.. ...+.++++....+ +++.+.+..+.+.+.
T Consensus 218 ~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 297 (405)
T TIGR03449 218 DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELV 297 (405)
T ss_pred CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHH
Confidence 45899999999999999999999999855 44 99999996431 24556666666554 468887777778888
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.+++.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.++++
T Consensus 298 ~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l~ 367 (405)
T TIGR03449 298 HVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLLD 367 (405)
T ss_pred HHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999987 89999999999999998
Q ss_pred hcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+ ++.+.+|+.++. .++|||+.++++|+++|.+++.
T Consensus 368 ~--~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 368 D--PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred C--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 7 666677766654 4789999999999999998763
No 14
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.2e-38 Score=343.26 Aligned_cols=364 Identities=19% Similarity=0.234 Sum_probs=256.8
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+..|.|. .||.+.++..|+++|+++||+|+|+|+.++..... ....+|+.++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999996 89999999999999999999999999864322110 0012344444
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHH--
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP-- 243 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~-- 243 (611)
.+....+... .. +. ++......+...+.. .+|| |||+|++...+..
T Consensus 58 ~~p~~~~~~~-------~~--------~~----~~~~~~~~l~~~~~~------------~~~D-iIh~~~~~~~~~~~~ 105 (398)
T cd03796 58 YLPFVVFYNQ-------ST--------LP----TFFGTFPLLRNILIR------------ERIT-IVHGHQAFSALAHEA 105 (398)
T ss_pred EecceeccCC-------cc--------cc----chhhhHHHHHHHHHh------------cCCC-EEEECCCCchHHHHH
Confidence 4422111100 00 00 001111222222222 2699 9999986654432
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
..+.+. .++|+|++.|+... .... ... ....+++..++.+|.++++
T Consensus 106 ~~~~~~-------~~~~~v~t~h~~~~-----~~~~-----~~~-----------------~~~~~~~~~~~~~d~ii~~ 151 (398)
T cd03796 106 LLHART-------MGLKTVFTDHSLFG-----FADA-----SSI-----------------HTNKLLRFSLADVDHVICV 151 (398)
T ss_pred HHHhhh-------cCCcEEEEeccccc-----ccch-----hhH-----------------HhhHHHHHhhccCCEEEEe
Confidence 222222 47899999996321 0000 000 0112445667899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+...+.+... .+.+ ..++.+||||+|...|.|...+ .+++.+
T Consensus 152 s~~~~~~~~~~--~~~~------~~k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~~ 194 (398)
T cd03796 152 SHTSKENTVLR--ASLD------PERVSVIPNAVDSSDFTPDPSK-----------------------------RDNDKI 194 (398)
T ss_pred cHhHhhHHHHH--hCCC------hhhEEEEcCccCHHHcCCCccc-----------------------------CCCCce
Confidence 99988765421 2333 2389999999999888765321 123568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++..++ .+++.+.+..+.+.+..+++.||+
T Consensus 195 ~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~ 272 (398)
T cd03796 195 TIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHI 272 (398)
T ss_pred EEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCE
Confidence 99999999999999999999998865 789999999987 345566666554 356888887788888899999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH-HH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-AL 558 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~-~~ 558 (611)
+++||..|+||++++|||+||+|||+++.||..|++.++..++ .+.|.++++++|.+++++.... ..
T Consensus 273 ~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~------------~~~~~~~l~~~l~~~l~~~~~~~~~ 340 (398)
T cd03796 273 FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILL------------AEPDVESIVRKLEEAISILRTGKHD 340 (398)
T ss_pred EEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceee------------cCCCHHHHHHHHHHHHhChhhhhhH
Confidence 9999999999999999999999999999999999998765333 4458999999999999873222 22
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 559 AEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 559 ~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
.+.+++.+.++|||+.++++|+++|++++..
T Consensus 341 ~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 341 PWSFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 3334444679999999999999999998753
No 15
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=2.7e-38 Score=338.54 Aligned_cols=373 Identities=22% Similarity=0.286 Sum_probs=266.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++|+..|+|. ..||.+.++..|+++|.++ |+|.|++...+.. ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999998885 5699999999999999987 8888887542210 0123333
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.+..+..... +... +..+.... ..... ..++| |||+|+|...+.+.
T Consensus 53 ~~~~~~~~~~~-----------------~~~~---~~~~~~~~---~~~~~---------~~~~d-ivh~~~~~~~~~~~ 99 (388)
T TIGR02149 53 KGYRPWSELKE-----------------ANKA---LGTFSVDL---AMAND---------PVDAD-VVHSHTWYTFLAGH 99 (388)
T ss_pred EEecChhhccc-----------------hhhh---hhhhhHHH---HHhhC---------CCCCC-eEeecchhhhhHHH
Confidence 32211100000 0000 00111111 11111 12699 99999988776665
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.++.. .++|+|+++|+..+....... .+ ..++ .....+.+..+..+|.++++|
T Consensus 100 ~~~~~-------~~~p~v~~~h~~~~~~~~~~~---------~~------~~~~-----~~~~~~~~~~~~~ad~vi~~S 152 (388)
T TIGR02149 100 LAKKL-------YDKPLVVTAHSLEPLRPWKEE---------QL------GGGY-----KLSSWAEKTAIEAADRVIAVS 152 (388)
T ss_pred HHHHh-------cCCCEEEEeeccccccccccc---------cc------ccch-----hHHHHHHHHHHhhCCEEEEcc
Confidence 55443 489999999975432111000 00 0000 011123466788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+.+++.+.+.. .++.. .++.+|+||+|...|.|.. ....+++++++. +.++
T Consensus 153 ~~~~~~~~~~~-~~~~~------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~ 203 (388)
T TIGR02149 153 GGMREDILKYY-PDLDP------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDR--SRPY 203 (388)
T ss_pred HHHHHHHHHHc-CCCCc------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCC--CceE
Confidence 99999887521 13332 3899999999998887642 345677888763 5579
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC--chhHHHHHHHHHHCCC---ceEEec-ccChHHHHHHHHHcc
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGAD 478 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~---~v~~~~-~~~~~~~~~i~~~aD 478 (611)
|+|+||+.+.||++.|++|++++. ++++++++|+|. ..+.+.++++...++. ++.++. ..+.+.+..+++.||
T Consensus 204 i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 204 ILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred EEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCC
Confidence 999999999999999999999984 578999988765 2345566665554432 355544 457778889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCH------HHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~------~~la~~i~~ll~~ 552 (611)
++++||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ +++|. ++++++|.+++++
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~~ 352 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLAD 352 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999987 88888 9999999999998
Q ss_pred cCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++.+.+|+.++. .++|||+.+++++.++|++++
T Consensus 353 --~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 353 --PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred --HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 777777777664 578999999999999999763
No 16
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=2.7e-38 Score=347.08 Aligned_cols=376 Identities=18% Similarity=0.245 Sum_probs=264.8
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecC
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (611)
+++|||++++... |....||.+..+.+|+++|.++||+|+++++..+. .+.+ .|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~~------------------------~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQEF------------------------HG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Cccc------------------------cC
Confidence 6789999998543 33468999999999999999999999999976321 1100 12
Q ss_pred ceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccc-
Q 007247 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS- 240 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~- 240 (611)
+.++.+.. +.. ..|.. + ...+. +...+..+++.. +|| |||+|+....
T Consensus 110 ~~v~~~~~--~~~--------~~~~~-----~---~~~~~-~~~~l~~~i~~~------------kpD-iIh~~~~~~~~ 157 (465)
T PLN02871 110 AKVIGSWS--FPC--------PFYQK-----V---PLSLA-LSPRIISEVARF------------KPD-LIHASSPGIMV 157 (465)
T ss_pred ceeeccCC--cCC--------ccCCC-----c---eeecc-CCHHHHHHHHhC------------CCC-EEEECCCchhH
Confidence 22211100 000 00000 0 00000 001122223322 699 9999975432
Q ss_pred hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEE
Q 007247 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (611)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (611)
+....+.+. .++|+|++.|+..... . ...... ......+.+++...+.+|.+
T Consensus 158 ~~~~~~ak~-------~~ip~V~~~h~~~~~~-~-----~~~~~~---------------~~~~~~~~~~r~~~~~ad~i 209 (465)
T PLN02871 158 FGALFYAKL-------LCVPLVMSYHTHVPVY-I-----PRYTFS---------------WLVKPMWDIIRFLHRAADLT 209 (465)
T ss_pred HHHHHHHHH-------hCCCEEEEEecCchhh-h-----hcccch---------------hhHHHHHHHHHHHHhhCCEE
Confidence 223333333 4899999999532200 0 000000 00001123456667899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|+...+.+.. .+.. ...++.+|+||+|.+.|.|... ....+.++... .+
T Consensus 210 i~~S~~~~~~l~~---~~~~-----~~~kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~-~~ 261 (465)
T PLN02871 210 LVTSPALGKELEA---AGVT-----AANRIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGG-EP 261 (465)
T ss_pred EECCHHHHHHHHH---cCCC-----CcCeEEEeCCccCccccCCccc-------------------cHHHHHHhcCC-CC
Confidence 9999999999885 2321 1228999999999998876532 12234443321 12
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +.+.++++.... ++.+.+..+.+.+..+|+.||++
T Consensus 262 ~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv~ 335 (465)
T PLN02871 262 EKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGDVF 335 (465)
T ss_pred CCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCEE
Confidence 557999999999999999999999987 589999999987 567777776653 48888777878888999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec---CcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 557 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~ 557 (611)
|+||..|+||++++|||+||+|||+++.||+.|++.+ +++|+++ +++|+++++++|.+++++ ++.
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~ 403 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--PEL 403 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHH
Confidence 9999999999999999999999999999999999999 9999987 999999999999999997 777
Q ss_pred HHHHHHHHH--HhhCCchHHHHHHHH-HHHHHHHc
Q 007247 558 LAEMMKNGM--AQDLSWKGPAKKWEE-TLLNLEVA 589 (611)
Q Consensus 558 ~~~~~~~~~--~~~fsw~~~a~~~~~-~~~~l~~~ 589 (611)
+.+|++++. .++|||+.+++++++ +|++++..
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 777777763 478999999999998 79988864
No 17
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=2.8e-37 Score=345.90 Aligned_cols=422 Identities=15% Similarity=0.161 Sum_probs=269.4
Q ss_pred CceEEEEeeee----cCc---cccccHHHHhccchHHH--------HhCCC----eEEEEeecCCcccccCCCceEEEEE
Q 007247 84 GLNILFVGTEV----APW---SKTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIELK 144 (611)
Q Consensus 84 ~MkIl~v~~~~----~P~---~~~GG~~~~~~~La~~L--------~~~Gh----~V~vit~~~~~~~~~~~~~~~~~~~ 144 (611)
.|||++|+.+. .|. ..+||...++.+|+++| +++|| +|.|+|...+.... .+-...++..
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~~ 333 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEKV 333 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-cccccccccc
Confidence 58999999886 221 13799999999999985 68999 77799977432211 0000000000
Q ss_pred eCCeeeEEEEEEeeecCceEEEEeCcc----chhhhcCCCCccccCCCCCCCCcchHH---HHHHHHHHHHHhhH-Hhcc
Q 007247 145 VGDKIEKVRFFHCHKRGVDRVFVDHPW----FLAKVWGKTQSKIYGPRTGEDYQDNQL---RFSLLCQAALEAPR-ILNL 216 (611)
Q Consensus 145 ~~~~~~~~~~~~~~~~gv~~~~i~~~~----~~~~~~~~~~~~iy~~~~~~~~~~~~~---r~~~~~~~~~~~~~-~l~~ 216 (611)
. ..+|+.++.+.... .+.+ |..... ....|...+.+.++ ....
T Consensus 334 ~------------~~~~~~I~rvp~g~~~~~~~~~-----------------~i~k~~l~p~l~~f~~~~~~~~~~~~~~ 384 (784)
T TIGR02470 334 Y------------GTEHAWILRVPFRTENGIILRN-----------------WISRFEIWPYLETFAEDAEKEILAELQG 384 (784)
T ss_pred c------------CCCceEEEEecCCCCccccccc-----------------ccCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 01244444432110 0000 122221 22334444444332 2221
Q ss_pred CCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCccccccccccc
Q 007247 217 NSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296 (611)
Q Consensus 217 ~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
+|| +||+|.|.+++++..++... ++|.++|.|....... .............+
T Consensus 385 ----------~pD-lIHahy~d~glva~lla~~l-------gVP~v~t~HsL~~~K~-~~~g~~~~~~e~~~-------- 437 (784)
T TIGR02470 385 ----------KPD-LIIGNYSDGNLVASLLARKL-------GVTQCTIAHALEKTKY-PDSDIYWQEFEDKY-------- 437 (784)
T ss_pred ----------CCC-EEEECCCchHHHHHHHHHhc-------CCCEEEECCcchhhcc-cccccccccchhHH--------
Confidence 599 99999999999998888774 8999999997643111 00000000000000
Q ss_pred CCCCCCCCcchhHhHHHhhhccEEEecCHHHHHH----HH---cCc------CC----CcccchhhhccceeEeeCCccc
Q 007247 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE----LV---SGE------DK----GVELDNIIRKTGIKGIVNGMDV 359 (611)
Q Consensus 297 ~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~----l~---~~~------~~----g~~~~~~~~~~~i~vI~Ngvd~ 359 (611)
. ....+.....++..||.||+.|...... +. +.. .+ |++. .+.++.+|++|+|.
T Consensus 438 ----~-~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~----~~~Ki~VVpPGVD~ 508 (784)
T TIGR02470 438 ----H-FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV----FDPKFNIVSPGADE 508 (784)
T ss_pred ----H-hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC----CcCCeEEECCCcCh
Confidence 0 0001122345678899999999754331 11 100 01 2211 12488999999999
Q ss_pred CCcCCCCccccccccC-cchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEE
Q 007247 360 QEWNPLTDKYIGVKYD-ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIV 436 (611)
Q Consensus 360 ~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvi 436 (611)
..|.|.+.+.- +.. ...-.+....++.+.++.+|+..++++++|+++||++++||++.|++|+.++.. ++++|+|
T Consensus 509 ~iF~P~~~~~~--r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVI 586 (784)
T TIGR02470 509 SIYFPYSDKEK--RLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVV 586 (784)
T ss_pred hhcCCCCchhh--hhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEE
Confidence 98877543100 000 000000001134455678887666788999999999999999999999987643 5799999
Q ss_pred EeCCCc----------hhHHHHHHHHHHCC--CceEEeccc-ChHHHHHHH---H-HccEEEeCCCCCCCcHHHHHHHHc
Q 007247 437 LGTGKK----------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMII---A-GADFILIPSRFEPCGLIQLHAMRY 499 (611)
Q Consensus 437 vG~g~~----------~~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~i~---~-~aDv~l~pS~~E~~gl~~lEAma~ 499 (611)
+|++.. ...+.+.+++.+++ +++.+.+.. +......++ + .+|++++||++|+||++++|||+|
T Consensus 587 VGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc 666 (784)
T TIGR02470 587 VAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC 666 (784)
T ss_pred EeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc
Confidence 998642 13345666776664 567766543 322233333 3 468999999999999999999999
Q ss_pred CCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh--cCHHHHHHHHHHHH---HhhCCchH
Q 007247 500 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKG 574 (611)
Q Consensus 500 G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~~---~~~fsw~~ 574 (611)
|+|||+|+.||+.|+|.++.+|+++ ++.|+++++++|.++++. .++..+.+++++++ .++|||+.
T Consensus 667 GlPVVAT~~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~ 736 (784)
T TIGR02470 667 GLPTFATRFGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKI 736 (784)
T ss_pred CCCEEEcCCCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999987 999999999999998742 13777888888775 58999999
Q ss_pred HHHHHHHHH
Q 007247 575 PAKKWEETL 583 (611)
Q Consensus 575 ~a~~~~~~~ 583 (611)
.+++++++.
T Consensus 737 ~A~~ll~l~ 745 (784)
T TIGR02470 737 YSERLLTLA 745 (784)
T ss_pred HHHHHHHHH
Confidence 999999876
No 18
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=6.2e-37 Score=327.63 Aligned_cols=362 Identities=16% Similarity=0.263 Sum_probs=259.7
Q ss_pred ceEEEEeeeecCc--cccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCc
Q 007247 85 LNILFVGTEVAPW--SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 85 MkIl~v~~~~~P~--~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (611)
-||+|+.++-.|. ...||++.++.++++.|++ +|+++|...+.+++.. ...+|+
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~---------------------~~~~~~ 58 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYT---------------------KVNDNC 58 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCchh---------------------hccCCC
Confidence 3788887764433 3689999999999999953 9999998866544320 112345
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
+++.+..+....+.. ++.+. . +...+.+.+...+..... .++| |||+|+... +.
T Consensus 59 ~~~~~~~~~~~~~~~----~~~~~--------~---~~~~~~~~~~~~~~~~~~---------~~~~-vi~v~~~~~-~~ 112 (380)
T PRK15484 59 DIHYIGFSRIYKRLF----QKWTR--------L---DPLPYSQRILNIAHKFTI---------TKDS-VIVIHNSMK-LY 112 (380)
T ss_pred ceEEEEeccccchhh----hhhhc--------c---CchhHHHHHHHHHHhcCC---------CCCc-EEEEeCcHH-hH
Confidence 555442221111000 00000 0 011223333333322211 1478 999997432 22
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
. .++.. ++++|+++++|+.. ....+..++.+++
T Consensus 113 ~-~~~~~------~~~~~~v~~~h~~~----------------------------------------~~~~~~~~~~ii~ 145 (380)
T PRK15484 113 R-QIRER------APQAKLVMHMHNAF----------------------------------------EPELLDKNAKIIV 145 (380)
T ss_pred H-HHHhh------CCCCCEEEEEeccc----------------------------------------ChhHhccCCEEEE
Confidence 2 22222 26889999999531 1112346799999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|++.++.+.+. .+ ..++.+||||+|...|.+.. ...++++++++. +.
T Consensus 146 ~S~~~~~~~~~~----~~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~--~~ 193 (380)
T PRK15484 146 PSQFLKKFYEER----LP------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISP--DE 193 (380)
T ss_pred cCHHHHHHHHhh----CC------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCC--CC
Confidence 999999988752 11 23789999999988776542 334566777753 44
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC-------chhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~-------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
++|+|+||+.+.||++.|++|++++.+ ++++|+|+|+|. ..+.+.++++...++.++.+.+..+.+.+..+
T Consensus 194 ~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~ 273 (380)
T PRK15484 194 TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNY 273 (380)
T ss_pred eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 789999999999999999999999865 789999999875 23566777777777777888887788888899
Q ss_pred HHHccEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 474 IAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 474 ~~~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
|+.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.+++++
T Consensus 274 ~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 274 YPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLAD 344 (380)
T ss_pred HHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcC
Confidence 9999999999986 99999999999999999999999999999999999953 3789999999999999998
Q ss_pred cCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 553 ~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++ +.++++++ ..++|||+.++++|+++|++..
T Consensus 345 --~~-~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 345 --PE-LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred --HH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 43 24555555 4689999999999999998753
No 19
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=9.9e-37 Score=328.43 Aligned_cols=275 Identities=20% Similarity=0.231 Sum_probs=219.1
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
++| +||+|.++.+.....++.... .+.|+++++|+...... . . ....
T Consensus 118 ~~d-iihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~---------~----~--------------~~~~ 164 (406)
T PRK15427 118 VAD-VFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR---------E----V--------------LNHY 164 (406)
T ss_pred CCC-EEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc---------h----h--------------hhhh
Confidence 699 999998877666666654211 24567889995432100 0 0 0011
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
...++..++++|.++++|+..++.+.+ +|++.+ ++.+|+||+|.+.|.+....
T Consensus 165 ~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~------------------ 217 (406)
T PRK15427 165 TPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK------------------ 217 (406)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc------------------
Confidence 124566788999999999999999875 565544 89999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEe
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 462 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~ 462 (611)
...+.+.|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.
T Consensus 218 -----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~ 284 (406)
T PRK15427 218 -----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP 284 (406)
T ss_pred -----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe
Confidence 01234679999999999999999999999975 589999999997 5667777776654 568888
Q ss_pred cccChHHHHHHHHHccEEEeCCCC------CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc
Q 007247 463 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 536 (611)
+..+.+.+..+++.||++++||.. |++|++++|||+||+|||+|+.||+.|++.++.+|+++ ++
T Consensus 285 G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~~ 354 (406)
T PRK15427 285 GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------PE 354 (406)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------CC
Confidence 877888888999999999999974 99999999999999999999999999999999999987 99
Q ss_pred cCHHHHHHHHHHHHH-hcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 537 VDVAAVSTTVRRALA-TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 537 ~d~~~la~~i~~ll~-~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
+|+++++++|.++++ + ++.+.+|++++ +.++|+|+..++++.++|+++
T Consensus 355 ~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 355 NDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999 7 66666666665 468999999999999999863
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.2e-36 Score=321.28 Aligned_cols=364 Identities=23% Similarity=0.247 Sum_probs=257.1
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++++. |. .||.+.++..|+++|+++||+|++++...+...... ..++..
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 89999973 43 699999999999999999999999997532111100 001111
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
..++.+.+-. .. ... . . ......+.++++. ++|| |||+|.+.....+.
T Consensus 53 ~~~~~~~~~~----------~~------~~~-~-~-~~~~~~l~~~i~~------------~~~d-ivh~~~~~~~~~~~ 100 (371)
T cd04962 53 HEVEVPQYPL----------FQ------YPP-Y-D-LALASKIAEVAKR------------YKLD-LLHVHYAVPHAVAA 100 (371)
T ss_pred EEecccccch----------hh------cch-h-H-HHHHHHHHHHHhc------------CCcc-EEeecccCCccHHH
Confidence 1111110000 00 000 0 0 0122333333332 2699 99999765544343
Q ss_pred HHHH-hccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 245 YLKT-MYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 245 ~l~~-~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
.+.. ..+. .++|+++++|+...... +.. .....+.+..++.+|.++++
T Consensus 101 ~~~~~~~~~----~~~~~i~~~h~~~~~~~---------~~~------------------~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 101 YLAREILGK----KDLPVVTTLHGTDITLV---------GQD------------------PSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHhcCc----CCCcEEEEEcCCccccc---------ccc------------------ccchHHHHHHHhhCCEEEEc
Confidence 3332 2211 37899999996432100 000 01123556778899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+...+.+... ++ . ..++.+|+||+|...+.+.. ....+++++++. +.+
T Consensus 150 s~~~~~~~~~~--~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 198 (371)
T cd04962 150 SESLRQETYEL--FD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEK 198 (371)
T ss_pred CHHHHHHHHHh--cC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCe
Confidence 99999988752 11 1 23799999999987765542 223456667653 457
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccEE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+++++||+.+.||++.++++++++.+ .+++|+|+|+|+ ..+.++++..+.+ +++.+.+.. +.+..+++.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEE
Confidence 89999999999999999999999876 579999999997 3455556555543 457766643 3466899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
++||.+|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++++ +..+.+
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 342 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQE 342 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999987 999999999999999987 667777
Q ss_pred HHHHHH---HhhCCchHHHHHHHHHHHHH
Q 007247 561 MMKNGM---AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 561 ~~~~~~---~~~fsw~~~a~~~~~~~~~l 586 (611)
|++++. .++|||+.++++|.++|+++
T Consensus 343 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 343 FSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 766653 68999999999999999864
No 21
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=2.6e-35 Score=317.10 Aligned_cols=373 Identities=17% Similarity=0.175 Sum_probs=249.5
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
|||||...||+. ...|+++|+++||+|+++|+....... . ||+++
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~~-----------------~---------~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPPP-----------------G---------GVRVV 45 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCCC-----------------C---------CeeEE
Confidence 699999987543 456999999999999999987332111 0 34444
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+..-. .....|...........+++.+.+..+..+ .++|| |||+|.... ...+
T Consensus 46 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~pd-vi~~h~~~~--~~~~ 102 (396)
T cd03818 46 RYRPPRGPT-------------SGTHPYLREFEEAVLRGQAVARALLALRAK-------GFRPD-VIVAHPGWG--ETLF 102 (396)
T ss_pred EecCCCCCC-------------CCCCccchhHHHHHHHHHHHHHHHHHHHhc-------CCCCC-EEEECCccc--hhhh
Confidence 443211100 011124444433333333344433333211 24699 899995322 2334
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCC--Cc---chhHhHHHhhhccEE
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR--GR---KINWMKAGILESDMV 320 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~k~~~~~ad~v 320 (611)
++..+ +++|+|.++|-... .. . ...+. ......... .+ ...+....+..+|.+
T Consensus 103 l~~~~------~~~~~v~~~~~~~~-~~-~----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 103 LKDVW------PDAPLIGYFEFYYR-AE-G----ADVGF----------DPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred HHHhC------CCCCEEEEEeeeec-CC-C----CCCCC----------CCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 55443 67899888763211 00 0 00000 000000000 00 011134568899999
Q ss_pred EecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007247 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (611)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 400 (611)
+++|++.++.+.+. + ..++.+|+||+|.+.|.|.... ....+...+++ +
T Consensus 161 i~~s~~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~~~~~~~--~ 209 (396)
T cd03818 161 VSPTRWQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRLPNGRVLT--P 209 (396)
T ss_pred ECCCHHHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcccccccCC--C
Confidence 99999999887641 1 1389999999999988765321 11111112222 3
Q ss_pred CCcEEEEEcC-cccccCHHHHHHHHHhccc--CCcEEEEEeCCCc-----------hhHHHHHHHHHHC-CCceEEeccc
Q 007247 401 NIPVIGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY-PEKARGVAKF 465 (611)
Q Consensus 401 ~~~~il~iGr-l~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~-----------~~~~~l~~l~~~~-~~~v~~~~~~ 465 (611)
+.++|+|+|| ++++||++.+++|++++.+ ++++|+|+|++.. ..++.++++.... .+++.+.+..
T Consensus 210 ~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v 289 (396)
T cd03818 210 GDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRV 289 (396)
T ss_pred CCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCC
Confidence 5578999998 9999999999999999875 7999999997421 1223344444321 2568888888
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
+.+.+..+|+.||++++||..|++|++++|||+||+|||+|+.||+.|++.++.+|+++ +++|+++++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~~~d~~~la~~ 359 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------DFFDPDALAAA 359 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------CCCCHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHH
Q 007247 546 VRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 546 i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
|.+++++ ++.+.+|++++ +.++|||+.++++|++
T Consensus 360 i~~ll~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 360 VIELLDD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHHHhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9999998 66666666666 4577999999999863
No 22
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.2e-35 Score=332.73 Aligned_cols=322 Identities=17% Similarity=0.182 Sum_probs=220.8
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
.|| +||+|.|.+++++..++... ++|.|+|.|...-... ...+..+-.....+ ... ..
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~-~~~~~~~~~~e~~y------------~~~-~r 465 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKY-PDSDIYWKKFDDKY------------HFS-CQ 465 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhc-cccCCcccccchhh------------hhh-hc
Confidence 599 99999999999999999875 9999999997643111 11100000001110 000 11
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHH-------HcCcCCCcc-cchhh-----hccceeEeeCCcccCCcCCCCccc--cc
Q 007247 307 INWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDKY--IG 371 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l-------~~~~~~g~~-~~~~~-----~~~~i~vI~Ngvd~~~~~p~~~~~--~~ 371 (611)
+.....++..||.||+.|......+ .++..+..+ +.+++ ...++.+|++|+|...|.|..... +.
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 2344567889999999998776422 221111111 01110 022889999999999887754210 00
Q ss_pred cccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC-c----hh
Q 007247 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K----PM 444 (611)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~-~----~~ 444 (611)
.-++.. +.........++.+|+..++++++|+++||+.++||++.|++|+.++.+ ++++|+|+|+|. + ..
T Consensus 546 ~l~n~I---~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHPSI---EELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhcccc---hhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 000000 0111123334567787666678899999999999999999999998754 579999999872 1 11
Q ss_pred -----HHHHHHHHHHCC--CceEEecccC----hHHHHHHHH-HccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc
Q 007247 445 -----EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 512 (611)
Q Consensus 445 -----~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~i~~-~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 512 (611)
.+.+.++..+++ +++.+.+... .+.+..+++ .+|++++||.+|+||++++|||+||+|||+|+.||+.
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 134556666654 5566654322 233444555 5799999999999999999999999999999999999
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh--cCHHHHHHHHHHHH---HhhCCchHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKGPAKKWEETL 583 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (611)
|+|.+|.+|+++ ++.|+++++++|.++++. .+++.+.+|+++++ .++|||+.++++++++.
T Consensus 703 EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 703 EIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999987 999999999999887641 12778888888774 47899999999998866
No 23
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=5e-35 Score=312.10 Aligned_cols=359 Identities=18% Similarity=0.181 Sum_probs=246.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCC-cccccCCCceEEEEEeCCeeeEEEEEEeeecCce
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (611)
-||++|...+ ..||++.++.+|+++|.+.||++++++.... .... .....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK----------------------RIQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH----------------------HHHhcCce
Confidence 4899999764 3699999999999999999999999984321 1110 00112444
Q ss_pred EEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHH
Q 007247 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (611)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~ 243 (611)
++.+..... ... .+...+..+++.. +|| |||+|...+.. .
T Consensus 56 ~~~~~~~~~----------------------~~~----~~~~~l~~~l~~~------------~~D-ivh~~~~~~~~-~ 95 (374)
T TIGR03088 56 FYALHKQPG----------------------KDV----AVYPQLYRLLRQL------------RPD-IVHTRNLAALE-A 95 (374)
T ss_pred EEEeCCCCC----------------------CCh----HHHHHHHHHHHHh------------CCC-EEEEcchhHHH-H
Confidence 443321100 000 1122233333332 699 99999654322 2
Q ss_pred HHHHHhccCCCCCCCceE-EEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHH-HhhhccEEE
Q 007247 244 CYLKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA-GILESDMVL 321 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~-v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~~~ad~vi 321 (611)
.++... .+.|. +++.|....... .. ......++++ ....+|.++
T Consensus 96 ~~~~~~-------~~~~~~i~~~h~~~~~~~-----------~~----------------~~~~~~~~~~~~~~~~~~~i 141 (374)
T TIGR03088 96 QLPAAL-------AGVPARIHGEHGRDVFDL-----------DG----------------SNWKYRWLRRLYRPLIHHYV 141 (374)
T ss_pred HHHHHh-------cCCCeEEEeecCcccccc-----------hh----------------hHHHHHHHHHHHHhcCCeEE
Confidence 222222 23443 445553211000 00 0011234433 334689999
Q ss_pred ecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007247 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (611)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 401 (611)
++|+...+.+.. .++++.+ ++.+|+||+|.+.|.+.... ....+++...+ ++
T Consensus 142 ~vs~~~~~~~~~--~~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~~--~~ 193 (374)
T TIGR03088 142 AVSRDLEDWLRG--PVKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILPPDFFA--DE 193 (374)
T ss_pred EeCHHHHHHHHH--hcCCChh------hEEEeccCccccccCCCccc------------------hhhhhHhhcCC--CC
Confidence 999999998875 2444433 88999999999888665311 11222222222 35
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHH
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMI 473 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i 473 (611)
.++|+++||+.++||++.+++|++++.+ ++++|+++|+|+ ..+.++++...++ +.+.+.+ + .+.+..+
T Consensus 194 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~-~~~~~~~ 269 (374)
T TIGR03088 194 SVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG-E-RDDVPAL 269 (374)
T ss_pred CeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC-C-cCCHHHH
Confidence 6899999999999999999999998864 279999999987 4456666666553 3344333 3 3446689
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
++.||++++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++
T Consensus 270 ~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~~i~~l~~~- 338 (374)
T TIGR03088 270 MQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALARALQPYVSD- 338 (374)
T ss_pred HHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999999999987 999999999999999987
Q ss_pred CHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 554 ~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 339 -~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 339 -PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred -HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 66666666555 4689999999999999998763
No 24
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=1.3e-34 Score=302.83 Aligned_cols=329 Identities=18% Similarity=0.191 Sum_probs=236.7
Q ss_pred ceEEEEeeeecC--ccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCc
Q 007247 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 85 MkIl~v~~~~~P--~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (611)
|||++|++.+.| ....||.+.++..|+.+|.++||+|+++++..+..... .. .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~~--~------ 55 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------LV--P------ 55 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------ee--e------
Confidence 899999998744 23589999999999999999999999999763321110 00 0
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
. ........ +.............+.+.++. .++| |||+|.+.....
T Consensus 56 -~--~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ivh~~~~~~~~~ 101 (335)
T cd03802 56 -V--VPEPLRLD------------------APGRDRAEAEALALAERALAA------------GDFD-IVHNHSLHLPLP 101 (335)
T ss_pred -c--cCCCcccc------------------cchhhHhhHHHHHHHHHHHhc------------CCCC-EEEecCcccchh
Confidence 0 00000000 000000111122222222222 2699 999998777655
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
+... .++|++++.|+..... ...........+.+++
T Consensus 102 ---~~~~-------~~~~~v~~~h~~~~~~----------------------------------~~~~~~~~~~~~~~~~ 137 (335)
T cd03802 102 ---FARP-------LPVPVVTTLHGPPDPE----------------------------------LLKLYYAARPDVPFVS 137 (335)
T ss_pred ---hhcc-------cCCCEEEEecCCCCcc----------------------------------cchHHHhhCcCCeEEE
Confidence 2221 5889999999643310 0012334567889999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|+...+.+.. . .++.+||||+|.+.|.+.. .+.
T Consensus 138 ~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~~ 171 (335)
T cd03802 138 ISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PKG 171 (335)
T ss_pred ecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CCC
Confidence 99999887653 1 2889999999998876532 134
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHH---CCCceEEecccChHHHHHHHHHccE
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~---~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
..++|+||+.+.||++.+++++++. +++|+|+|.|.. ...+...... ..+++.+.+..+.+.+..+++.+|+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 6899999999999999999998764 799999999963 2222222222 2467888888888888889999999
Q ss_pred EEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHH
Q 007247 480 ILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (611)
Q Consensus 480 ~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 558 (611)
+++||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. .
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~--- 309 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D--- 309 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H---
Confidence 9999985 99999999999999999999999999999999999987 44 99999999998764 2
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 559 AEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 559 ~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
.+.+++...++|||+.++++|+++|+
T Consensus 310 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 12344456799999999999999984
No 25
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=1.2e-34 Score=310.58 Aligned_cols=380 Identities=23% Similarity=0.277 Sum_probs=263.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
+++++.+...+| ..||++.++.+|+++|+++||+|+|++...+...... ....+|+.+
T Consensus 7 ~~~~~~~~~~~~--~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~ 64 (398)
T cd03800 7 LHGSPLAQPGGA--DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRV 64 (398)
T ss_pred ccccccccCCCC--CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEE
Confidence 444444443334 3799999999999999999999999997643221100 011234444
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.+....... +. .......+..+...+...++... .+|| +||+|.+..+..+.
T Consensus 65 ~~~~~~~~~~----------~~------~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~~~~~~~~~ 117 (398)
T cd03800 65 VRVPAGPAEY----------LP------KEELWPYLDEFADDLLRFLRREG----------GRPD-LIHAHYWDSGLVAL 117 (398)
T ss_pred EecccccccC----------CC------hhhcchhHHHHHHHHHHHHHhcC----------CCcc-EEEEecCccchHHH
Confidence 4443211100 00 00000011123333444333321 1599 99999888877777
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.++.. .++|+|++.|+........ ...... .........++..++.+|.++++|
T Consensus 118 ~~~~~-------~~~~~i~~~h~~~~~~~~~------~~~~~~-------------~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 118 LLARR-------LGIPLVHTFHSLGAVKRRH------LGAADT-------------YEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHhh-------cCCceEEEeecccccCCcc------cccccc-------------cchhhhhhHHHHHHhhCCEEEEcC
Confidence 66655 4899999999643211100 000000 000112234566788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+...+.+... ++.. ..++.+|+||+|...|.+... ....+++.+.+ .+.++
T Consensus 172 ~~~~~~~~~~--~~~~------~~~~~vi~ng~~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 222 (398)
T cd03800 172 PQEAEELYSL--YGAY------PRRIRVVPPGVDLERFTPYGR-------------------AEARRARLLRD--PDKPR 222 (398)
T ss_pred HHHHHHHHHH--cccc------ccccEEECCCCCccceecccc-------------------hhhHHHhhccC--CCCcE
Confidence 9998888752 2222 226899999999988765532 11113344443 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCch----hHHHHHHHHHHCC--CceEEecccChHHHHHHHHH
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~ 476 (611)
|+|+||+.+.||++.+++++.++.+ ++++|+++|++... ....++.+...+. +++.+.+..+.+.+..+++.
T Consensus 223 i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 302 (398)
T cd03800 223 ILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRA 302 (398)
T ss_pred EEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHh
Confidence 9999999999999999999999975 68999999987632 2334455555443 56888888888888899999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
||++++||..|++|++++|||+||+|||+++.+|..|++.++++|+++ +++|+++++++|.+++++ ++
T Consensus 303 adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~ 370 (398)
T cd03800 303 ADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--PA 370 (398)
T ss_pred CCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--HH
Confidence 999999999999999999999999999999999999999999999987 899999999999999988 77
Q ss_pred HHHHHHHHHH---HhhCCchHHHHHHH
Q 007247 557 ALAEMMKNGM---AQDLSWKGPAKKWE 580 (611)
Q Consensus 557 ~~~~~~~~~~---~~~fsw~~~a~~~~ 580 (611)
.+.++++++. .++|||+.++++|+
T Consensus 371 ~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 371 LRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7777777764 48999999999986
No 26
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=6.7e-35 Score=312.68 Aligned_cols=381 Identities=14% Similarity=0.093 Sum_probs=236.4
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCC-CeEEEEeecCCcccc--cCCCceEEEEEeCCeeeEEEEEEee
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKD--AWDTDVVIELKVGDKIEKVRFFHCH 158 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (611)
.++|||++++..|.|| .+|+...+..++..|+++| |+|+||+|.++...+ .|... +.+....+.....+.
T Consensus 2 ~~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~----~~f~~~~~~e~~~~~- 74 (462)
T PLN02846 2 QKKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNK----ITFSSPSEQEAYVRQ- 74 (462)
T ss_pred CCCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCcccccccccccc----ccccCchhhhhhhhh-
Confidence 3579999999999998 8999999999999999999 899999998753211 01100 000000000000000
Q ss_pred ecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCc
Q 007247 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 238 (611)
Q Consensus 159 ~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~ 238 (611)
..+-.++++....+ ..|...-+.+ .+.......+.+.++.+ +|| |||+|+..
T Consensus 75 ~~~~~v~r~~s~~~----------p~yp~r~~~~-----~r~~~~~~~i~~~l~~~------------~pD-VIHv~tP~ 126 (462)
T PLN02846 75 WLEERISFLPKFSI----------KFYPGKFSTD-----KRSILPVGDISETIPDE------------EAD-IAVLEEPE 126 (462)
T ss_pred hccCeEEEeccccc----------ccCccccccc-----ccccCChHHHHHHHHhc------------CCC-EEEEcCch
Confidence 00111112211110 0011000000 01111123333444433 699 99998733
Q ss_pred -cchH--HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHh-
Q 007247 239 -TSLI--PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI- 314 (611)
Q Consensus 239 -~~~~--~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~- 314 (611)
.+++ +..+... .+. +|.+.|.... ..+ ...+. +... ....+++...+
T Consensus 127 ~LG~~~~g~~~~~k-------~~~-vV~tyHT~y~-~Y~-----~~~~~------------g~~~---~~l~~~~~~~~~ 177 (462)
T PLN02846 127 HLTWYHHGKRWKTK-------FRL-VIGIVHTNYL-EYV-----KREKN------------GRVK---AFLLKYINSWVV 177 (462)
T ss_pred hhhhHHHHHHHHhc-------CCc-EEEEECCChH-HHH-----HHhcc------------chHH---HHHHHHHHHHHH
Confidence 3443 2222221 133 7889996221 100 00000 0000 00111122222
Q ss_pred -hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 315 -LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 315 -~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
..+|.++++|....+ +.. .+...++|+|.+.|.|... ..++.
T Consensus 178 r~~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~~~ 220 (462)
T PLN02846 178 DIYCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLEQQ 220 (462)
T ss_pred HHhcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHhhh
Confidence 248999999986655 442 2333458999998876632 11222
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 471 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 471 (611)
.+ +.+.-.+.++|+|||.++||++.|++|++++.+ ++++|+|+|+|+ ..+.+++++.+++..+..+.++... .
T Consensus 221 ~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~--~ 295 (462)
T PLN02846 221 KN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHA--D 295 (462)
T ss_pred cC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCH--H
Confidence 22 211113479999999999999999999999865 689999999998 5677888877766434444444332 2
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.+++.+|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+++ .|.++++++|..++.
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l~ 362 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKALA 362 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHHc
Confidence 599999999999999999999999999999999999998 5999999999964 689999999999998
Q ss_pred hcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
+. +..+ ... ..+.|||+..+++++++|+--
T Consensus 363 ~~-~~~~---~~~-a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 363 EE-PAPL---TDA-QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred cC-chhH---HHH-HHHhCCHHHHHHHHHHHhccC
Confidence 62 2222 222 236999999999999999743
No 27
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.6e-34 Score=310.53 Aligned_cols=387 Identities=16% Similarity=0.126 Sum_probs=233.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
||||+|...+ ..||+|.++.+|++.|.++||+|.++..+........ ..+++..
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~----------------------~~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESV----------------------SHQNYPQ 54 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCccccc----------------------ccCCcce
Confidence 8999999753 4699999999999999999999999988733222100 0001111
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHH--HHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF--SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
.....+.+-.. + .....|+ ...+....++.+.+.+ .++|| |||.|..+..++
T Consensus 55 ~~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~pD-viHlH~~~~~~~ 108 (405)
T PRK10125 55 VIKHTPRMTAM--------A---------NIALFRLFNRDLFGNFNELYRTITR--------TPGPV-VLHFHVLHSYWL 108 (405)
T ss_pred EEEecccHHHH--------H---------HHHHHHhcchhhcchHHHHHHHHhh--------ccCCC-EEEEecccCcee
Confidence 11111111110 0 0000000 0011111111211111 13799 999998887533
Q ss_pred HHH--HHHhccCCCCCCCceEEEEEecCcc-ccccCcccccccCCCccccccc-cc--ccCCCCCCCC-------cchhH
Q 007247 243 PCY--LKTMYKPKGMYKSAKVVFCIHNIAY-QGRFAFEDFGLLNLPAQFKSSF-DF--IDGYNKPVRG-------RKINW 309 (611)
Q Consensus 243 ~~~--l~~~~~~~~~~~~~k~v~~iH~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~-------~~~~~ 309 (611)
... ++.....+..-+++|+|+|.|+... .|.+.... ....|.... .+ ..+|...... ++...
T Consensus 109 ~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~-----~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~ 183 (405)
T PRK10125 109 NLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTD-----GCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQL 183 (405)
T ss_pred cHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCc-----ccccccccCCCCCCccCCCCCccchHHHHHHHHHHH
Confidence 221 1110000000157899999998753 33333211 011111100 00 1111111011 11222
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 389 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (611)
.+.....++.++++|++.++.+.+. ++. .++.+|+||+|+..+.+.... ..
T Consensus 184 ~~~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~~-------------------~~ 234 (405)
T PRK10125 184 FREMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAEL-------------------PP 234 (405)
T ss_pred HHHHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCcccccccccc-------------------cc
Confidence 2333345689999999999988752 332 289999999997533221110 00
Q ss_pred HHHHhCCCCCCCCcEEEEEcCc--ccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-C
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-N 466 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl--~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~ 466 (611)
.+ ..+++++|+++|+. .+.||++.|++|++++. ++++|+|+|+|+... ..++...+.. +
T Consensus 235 ~~------~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~~g~~~~ 296 (405)
T PRK10125 235 VR------ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVNHGFETD 296 (405)
T ss_pred cc------cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEEecCcCC
Confidence 00 11255789999994 36899999999999874 589999999986311 1235554433 4
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
...+..+|+.||++++||.+|+||++++|||+||+|||+|+.||++|++.++ +|+++ +++|+++||+.+
T Consensus 297 ~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~~~La~~~ 365 (405)
T PRK10125 297 KRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEVLQLAQLS 365 (405)
T ss_pred HHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCHHHHHhcc
Confidence 4566789999999999999999999999999999999999999999999875 89987 999999999865
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 547 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
...+.+..-....+.+++.+.++|||+.++++|+++|+++
T Consensus 366 ~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 366 KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 4333220000011223444578899999999999999864
No 28
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=7.8e-34 Score=303.00 Aligned_cols=275 Identities=18% Similarity=0.175 Sum_probs=203.7
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
++| |||+|++....++...+ . .++|+|++.|+..... ....
T Consensus 85 ~~D-vv~~h~~~~~~~~~~~~-~-------~~~~~i~~~H~~~~~~------------------------------~~~~ 125 (372)
T cd03792 85 DAD-VVVIHDPQPLALPLFKK-K-------RGRPWIWRCHIDLSSP------------------------------NRRV 125 (372)
T ss_pred CCC-EEEECCCCchhHHHhhh-c-------CCCeEEEEeeeecCCC------------------------------cHHH
Confidence 699 99999887543332222 1 3789999999532100 0122
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCC-cCCCCccccccccCcchhhhccHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPL 385 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 385 (611)
+.+++..+..+|.+++.|..+.. .++.. .++ +||||+|... +... ++ +.
T Consensus 126 ~~~~~~~~~~~d~~i~~~~~~~~-------~~~~~------~~~-vipngvd~~~~~~~~--------~~--------~~ 175 (372)
T cd03792 126 WDFLQPYIEDYDAAVFHLPEYVP-------PQVPP------RKV-IIPPSIDPLSGKNRE--------LS--------PA 175 (372)
T ss_pred HHHHHHHHHhCCEEeecHHHhcC-------CCCCC------ceE-EeCCCCCCCccccCC--------CC--------HH
Confidence 34567778899999998843321 22221 144 9999999642 1111 10 12
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc---hhHHHHHHHHHH--CCCc
Q 007247 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEK 458 (611)
Q Consensus 386 ~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~--~~~~ 458 (611)
....+++++|++. +.++|+++||+.++||++.+++|++.+.+ ++++|+|+|+|+. +..+.++++... ..++
T Consensus 176 ~~~~~~~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 176 DIEYILEKYGIDP--ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HHHHHHHHhCCCC--CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCC
Confidence 2445677888764 56899999999999999999999998865 6899999999863 233344444422 3345
Q ss_pred eEEeccc--ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc
Q 007247 459 ARGVAKF--NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (611)
Q Consensus 459 v~~~~~~--~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 536 (611)
+.+.+.. +.+.+..+++.||++++||.+|+||++++|||+||+|||+|+.||..+++.++.+|+++ +
T Consensus 254 v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~- 322 (372)
T cd03792 254 IHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D- 322 (372)
T ss_pred eEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C-
Confidence 6666554 66778889999999999999999999999999999999999999999999999999975 3
Q ss_pred cCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 537 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 537 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
+.++++.+|.+++.+ ++.+.+|++++ +.++|||+.++++|+++|+.+
T Consensus 323 -~~~~~a~~i~~ll~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 323 -TVEEAAVRILYLLRD--PELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred -CcHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 567889999999987 66677777666 357999999999999999863
No 29
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=1.5e-34 Score=310.14 Aligned_cols=229 Identities=16% Similarity=0.179 Sum_probs=181.7
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
+.+..++.+|.|+++|+...+.+.+. ++.. ....+.+|+||+|.+.+.+.... .
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~-----~~~~~~vi~n~vd~~~~~~~~~~-------------------~ 200 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKT--FPSL-----AKNPREVVYPCVDTDSFESTSED-------------------P 200 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHH--hccc-----ccCCcceeCCCcCHHHcCccccc-------------------c
Confidence 34556788999999999999988752 2211 11234689999999888664321 0
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-----CCcEEEEEeCCCc------hhHHHHHHHHHH-C-
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 455 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~-----~~~~lvivG~g~~------~~~~~l~~l~~~-~- 455 (611)
.......+ ++.++|+++||+.+.||++.+++|++++.+ ++++|+++|+|+. .+.+.++++..+ +
T Consensus 201 -~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 201 -DPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred -cccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 11112222 355899999999999999999999999865 4899999999863 244667777665 3
Q ss_pred -CCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccC
Q 007247 456 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 534 (611)
Q Consensus 456 -~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v 534 (611)
.+++.+.+..+.+.+..+++.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 357888888888888899999999999999999999999999999999999999999999999999986
Q ss_pred CccCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHH
Q 007247 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 579 (611)
Q Consensus 535 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~ 579 (611)
++ |+++++++|.+++++ ++.+.++++++ +.++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 55 899999999999998 55666666665 46899999998764
No 30
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=1.6e-33 Score=316.70 Aligned_cols=473 Identities=19% Similarity=0.245 Sum_probs=349.6
Q ss_pred eEEEEeeeec-----CccccccHHHHhccchHHHHhCCCeEEEEeecCCccc---------------ccC-------CC-
Q 007247 86 NILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK---------------DAW-------DT- 137 (611)
Q Consensus 86 kIl~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~---------------~~~-------~~- 137 (611)
-+++++.||. |. ..||+|...+...++++..|...+-++..|.+.- +.| +.
T Consensus 87 ~~aYFs~E~gl~~~lpi-YsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLPI-YSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 3558888875 53 6799999999999999999999999988764210 112 11
Q ss_pred ------ceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchhhhcCCCCc-cccCCCCCCCCcchHHH---HHHHHHHH
Q 007247 138 ------DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLR---FSLLCQAA 207 (611)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~-~iy~~~~~~~~~~~~~r---~~~~~~~~ 207 (611)
...+.+++.+....++.+.....+|+.+++|++......+.+... .+|++ ++..| +.+|+.+.
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~ag 238 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-------DQETRIQQEILLGIGG 238 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-------cHHHHHHHHHHHHHHH
Confidence 235566777777788888888889999999988743222333322 46763 45667 58999999
Q ss_pred HHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH-----HHHHh-ccCCC--CCCCceEEEEEecCcccc--ccCcc
Q 007247 208 LEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-----YLKTM-YKPKG--MYKSAKVVFCIHNIAYQG--RFAFE 277 (611)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~-----~l~~~-~~~~~--~~~~~k~v~~iH~~~~~~--~~~~~ 277 (611)
+++++.+.+ +|| |||+||||++++++ +++.. +.... -..+.++|||+|+..++| +|+.+
T Consensus 239 l~~Lr~lg~----------~pd-ViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~ 307 (778)
T cd04299 239 VRALRALGI----------KPT-VYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPD 307 (778)
T ss_pred HHHHHHhCC----------CCe-EEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHH
Confidence 999988764 599 99999999999998 44321 10000 012578999999999999 99987
Q ss_pred cccc--------cCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHH---HHHHHcCcCCCcccchhhh
Q 007247 278 DFGL--------LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIR 346 (611)
Q Consensus 278 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~~ 346 (611)
.+.. ++++...+........-. ....+++++.++..|+.+.+||+-+ .+++......|.++ +
T Consensus 308 l~~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~----~ 380 (778)
T cd04299 308 LVERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV----E 380 (778)
T ss_pred HHHHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc----c
Confidence 7733 566654433222211100 0134799999999999999999988 44443321223332 2
Q ss_pred ccceeEeeCCcccCCcC-CCCccccccccC---------------------cchhhhccHHHHHHHHHHh----------
Q 007247 347 KTGIKGIVNGMDVQEWN-PLTDKYIGVKYD---------------------ASTVMDAKPLLKEALQAEV---------- 394 (611)
Q Consensus 347 ~~~i~vI~Ngvd~~~~~-p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~---------- 394 (611)
..++..|.||||...|. |..++.+ .+|. ...+...|..+|.++.+.+
T Consensus 381 ~~~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 EVPIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred cCceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34799999999999998 7666655 3331 1233456777777766654
Q ss_pred -----------CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC------chhHHHHHHH
Q 007247 395 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQL 451 (611)
Q Consensus 395 -----------gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~------~~~~~~l~~l 451 (611)
+.+.+++.++|+|++|+.++||.+++++.+.++.+ .++|||++|++. +.+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 55667888999999999999999999999888744 479999999987 4566788888
Q ss_pred HH--HCCCceEEecccChHHHHHHHHHccEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEeccc
Q 007247 452 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 527 (611)
Q Consensus 452 ~~--~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~ 527 (611)
.. .+++++.++..|+..+++.++++||++++||+ +|+||++.+-||..|.+-+++-.|...|.. ++.|||.+|.-
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 87 67789999999999999999999999999999 899999999999999999999999999987 78999999742
Q ss_pred c--cccccCCccCHHHHHHHHHHHHH-hc-C------HHHHHHHHHHHHHh---hCCchHHHHHHHH-HHHHH
Q 007247 528 S--VDCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEE-TLLNL 586 (611)
Q Consensus 528 ~--~~~~~v~~~d~~~la~~i~~ll~-~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~-~~~~l 586 (611)
. .+.+.-+..|.++|-++|++.+- -+ + +..+.+|.+++|.+ .|||+.++++|.+ +|.-+
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~ 691 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPA 691 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHH
Confidence 1 11222244677788888866544 22 1 46799999999987 9999999999965 44443
No 31
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-35 Score=291.35 Aligned_cols=368 Identities=20% Similarity=0.259 Sum_probs=269.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
++|+.|+.+|+|. .||++..++.|++.|.+.||.|.++|-.|++... +| ..-+|+++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------ir---ylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------IR---YLTNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------ee---eecCCceE
Confidence 5799999999996 9999999999999999999999999998865322 22 22356888
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
|+++....+.. .|--.+|+ .+.++.... ++. +.. |||.|...+.+.--
T Consensus 58 yylp~~v~~n~---tT~ptv~~------------~~Pllr~i~---lrE-------------~I~-ivhghs~fS~lahe 105 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFS------------DFPLLRPIL---LRE-------------RIE-IVHGHSPFSYLAHE 105 (426)
T ss_pred EEEeeeeeecc---cchhhhhc------------cCcccchhh---hhh-------------ceE-EEecCChHHHHHHH
Confidence 87754433321 01111121 111111111 111 356 89998755555433
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+.... ..|.++|||-|. .|.+.++.....+ +.+...+...|++||+|
T Consensus 106 ~l~har-----tMGlktVfTdHS-----lfGfad~~si~~n----------------------~ll~~sL~~id~~IcVs 153 (426)
T KOG1111|consen 106 ALMHAR-----TMGLKTVFTDHS-----LFGFADIGSILTN----------------------KLLPLSLANIDRIICVS 153 (426)
T ss_pred HHHHHH-----hcCceEEEeccc-----cccccchhhhhhc----------------------ceeeeeecCCCcEEEEe
Confidence 333221 158999999995 3443333221111 23445677899999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
...++...- + ..+.+.++.+|||.++...|.|.+.. . ...+..+
T Consensus 154 htskentvl---r-----~~L~p~kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~~ 197 (426)
T KOG1111|consen 154 HTSKENTVL---R-----GALAPAKVSVIPNAVVTHTFTPDAAD---------------------------K-PSADIIT 197 (426)
T ss_pred ecCCCceEE---E-----eccCHhHeeeccceeeccccccCccc---------------------------c-CCCCeeE
Confidence 987765442 1 12334599999999999999985321 0 2234478
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc--hhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
|+.++||..+||+|.|+++++++.+ ++++|+|+|+|++ .+++.++++..+ +++...+..+.+.+.+.|.+-|+|
T Consensus 198 ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~--~rV~~lG~v~h~~Vr~vl~~G~IF 275 (426)
T KOG1111|consen 198 IVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQ--DRVVMLGTVPHDRVRDVLVRGDIF 275 (426)
T ss_pred EEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhcc--CceEEecccchHHHHHHHhcCcEE
Confidence 9999999999999999999999987 8999999999994 577777777655 569999999999999999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
+.||..|+|+++++|||+||+|||+++.||++|++.++ .-++ ...++++++++++.++...... -+
T Consensus 276 lntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~~-----------~~~~~~dl~~~v~~ai~~~~~~--p~ 341 (426)
T KOG1111|consen 276 LNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MITL-----------GEPGPDDLVGAVEKAITKLRTL--PL 341 (426)
T ss_pred eccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-ceec-----------cCCChHHHHHHHHHHHHHhccC--ch
Confidence 99999999999999999999999999999999999876 2222 6678899999999998864321 12
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHcCC
Q 007247 561 MMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 591 (611)
Q Consensus 561 ~~~~~~~~~fsw~~~a~~~~~~~~~l~~~~~ 591 (611)
-..+.+.+.|+|+.++++.+++|.++....+
T Consensus 342 ~~h~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 342 EFHDRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred hHHHHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 2345567889999999999999999987654
No 32
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=8.5e-34 Score=301.31 Aligned_cols=349 Identities=15% Similarity=0.165 Sum_probs=239.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhC--CCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCc
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (611)
|||++++..++. .||++.++..|+++|.++ ||+|.++++....... |. ....+. .....+
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~-~~-------------~~~~~~-~~~~~~ 62 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMDKA-WL-------------KEIKYA-QSFSNI 62 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChH-HH-------------Hhcchh-cccccc
Confidence 899999875433 599999999999999999 8999999976331111 10 000000 000000
Q ss_pred eEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchH
Q 007247 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (611)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~ 242 (611)
... +.... .....+.+.++. .+|| +||+|+....+.
T Consensus 63 ~~~---------------------------~~~~~----~~~~~l~~~l~~------------~~~D-ii~~~~~~~~~~ 98 (359)
T PRK09922 63 KLS---------------------------FLRRA----KHVYNFSKWLKE------------TQPD-IVICIDVISCLY 98 (359)
T ss_pred hhh---------------------------hhccc----HHHHHHHHHHHh------------cCCC-EEEEcCHHHHHH
Confidence 000 00000 011122223332 2699 999997655454
Q ss_pred HHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 243 ~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
...++.... ...+++.+.|.... ... ...+ ..+..+|.+++
T Consensus 99 ~~~~~~~~~-----~~~~~~~~~h~~~~---------------~~~-----------------~~~~--~~~~~~d~~i~ 139 (359)
T PRK09922 99 ANKARKKSG-----KQFKIFSWPHFSLD---------------HKK-----------------HAEC--KKITCADYHLA 139 (359)
T ss_pred HHHHHHHhC-----CCCeEEEEecCccc---------------ccc-----------------hhhh--hhhhcCCEEEE
Confidence 444444321 23456666673211 000 0001 12368999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|+..++.+.. +|++.+ ++.+|+||+|.+.+..... ...+.
T Consensus 140 ~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~------------------------------~~~~~ 180 (359)
T PRK09922 140 ISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP------------------------------ERDKP 180 (359)
T ss_pred cCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc------------------------------ccCCC
Confidence 99999999885 455543 8999999999654421110 11245
Q ss_pred cEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccCh--HHHHHHHHH
Q 007247 403 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNI--PLAHMIIAG 476 (611)
Q Consensus 403 ~~il~iGrl~--~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~--~~~~~i~~~ 476 (611)
++++++||+. ++||++.+++++.++. ++++|+|+|+|+ ..+.++++..++ ++++.+.+..+. +.+..+++.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhc
Confidence 7899999996 4699999999999885 489999999997 355667766654 356777765533 667788999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~ 555 (611)
||++++||.+|+||++++|||+||+|||+++ .||..|+|.++.+|+++ +++|+++++++|.++++++
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~i~~l~~~~-- 325 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGKLNKVISGE-- 325 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHHHHHHHhCc--
Confidence 9999999999999999999999999999999 89999999999999987 9999999999999999984
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 556 QALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 556 ~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+.+..........+|+-+...+++.++|..+..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 326 VKYQHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 321112222235788889999999999988753
No 33
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.2e-33 Score=292.80 Aligned_cols=356 Identities=18% Similarity=0.187 Sum_probs=240.5
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+.+++|. ..||++.++.+|+++|.++||+|+|+++....... .....|++++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 799998775553 58999999999999999999999999976322110 1112466665
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+.... ...+...........+ . ++| ++|+|.+.....+..
T Consensus 58 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~--~-----------~~~-~~~i~~~~~~~~~~~ 101 (363)
T cd04955 58 HIPAPEIGG----------------------LGTIIYDILAILHALF--V-----------KRD-IDHVHALGPAIAPFL 101 (363)
T ss_pred EcCCCCccc----------------------hhhhHHHHHHHHHHHh--c-----------cCC-eEEEEecCccHHHHH
Confidence 543221000 0000001111111111 1 244 444443333222222
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh-HhHHHhhhccEEEecC
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVLTVS 324 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~ad~vi~vS 324 (611)
..... .+.|+++++|+..+... .+.. + ..+... ..+..+..+|.++++|
T Consensus 102 ~~~~~------~~~~~v~~~h~~~~~~~---------~~~~--------------~-~~~~~~~~~~~~~~~ad~ii~~s 151 (363)
T cd04955 102 PLLRL------KGKKVVVNMDGLEWKRA---------KWGR--------------P-AKRYLKFGEKLAVKFADRLIADS 151 (363)
T ss_pred HHHHh------cCCCEEEEccCcceeec---------cccc--------------c-hhHHHHHHHHHHHhhccEEEeCC
Confidence 11111 37899999996533110 0000 0 001122 2355678999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..++.+... +|.. . .+|+||+|...+.+. ....++.+++ +.+.
T Consensus 152 ~~~~~~~~~~--~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~~ 195 (363)
T cd04955 152 PGIKEYLKEK--YGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGRY 195 (363)
T ss_pred HHHHHHHHHh--cCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCcE
Confidence 9999998642 4432 3 889999998765431 1233444544 2346
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC--chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
++|+||+.+.||++.+++|++++.. +++|+|+|+|+ ..+.+.+++. ....+++.+.+..+.+....++..||++++
T Consensus 196 i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 273 (363)
T cd04955 196 YLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFYL 273 (363)
T ss_pred EEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEEe
Confidence 8899999999999999999999865 89999999985 2344444431 223457888888888888889999999999
Q ss_pred CCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 483 PSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 483 pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
||.. |+||++++|||+||+|||+|+.|+..|++++ +|+++ +++|. ++++|.+++++ ++.+.++
T Consensus 274 ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~~ 337 (363)
T cd04955 274 HGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSAM 337 (363)
T ss_pred CCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHHH
Confidence 9999 9999999999999999999999999999976 67776 66665 99999999998 5666666
Q ss_pred HHHH---HHhhCCchHHHHHHHHHHH
Q 007247 562 MKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 562 ~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
++++ ..++|||+.++++|+++|+
T Consensus 338 ~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 338 AKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6655 3567999999999999984
No 34
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.1e-33 Score=291.33 Aligned_cols=360 Identities=23% Similarity=0.266 Sum_probs=252.5
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+..|+|. .||.+..+..|+++|+++||+|+++++.......... ..+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999998885 5999999999999999999999999987432111100 000000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-chHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPC 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~~~~ 244 (611)
....+.+ .. .. +. ... .......++. .+|| +||+|.... .....
T Consensus 56 ~~~~~~~-~~------~~---------~~--~~~----~~~~~~~~~~------------~~pd-ii~~~~~~~~~~~~~ 100 (364)
T cd03814 56 SVPLPGY-PE------IR---------LA--LPP----RRRVRRLLDA------------FAPD-VVHIATPGPLGLAAL 100 (364)
T ss_pred ccccCcc-cc------eE---------ec--ccc----hhhHHHHHHh------------cCCC-EEEEeccchhhHHHH
Confidence 0000000 00 00 00 000 0111111222 2699 888875433 22233
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+... .++|+++++|+...+-. ... ... ..........+..+..+|.++++|
T Consensus 101 ~~~~~-------~~~~~i~~~~~~~~~~~------~~~-~~~--------------~~~~~~~~~~~~~~~~~d~i~~~s 152 (364)
T cd03814 101 RAARR-------LGIPVVTSYHTDFPEYL------RYY-GLG--------------PLSWLAWAYLRWFHNRADRVLVPS 152 (364)
T ss_pred HHHHH-------cCCCEEEEEecChHHHh------hhc-ccc--------------hHhHhhHHHHHHHHHhCCEEEeCC
Confidence 33322 48999999996432100 000 000 000011345566788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+...+.+.. .+.. ++.+++||+|...+.+... ....+.+++ ..+.++
T Consensus 153 ~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~---~~~~~~ 199 (364)
T cd03814 153 PSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG---PPDRPV 199 (364)
T ss_pred HHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC---CCCCeE
Confidence 999986654 2222 7889999999988866532 122333444 134578
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
|+|+|++.+.||++.++++++++.+ ++++|+|+|.|+. ...++ ...+++.+.+..+.+.+..+++.||++++|
T Consensus 200 i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~ 273 (364)
T cd03814 200 LLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFP 273 (364)
T ss_pred EEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEEC
Confidence 9999999999999999999999976 5899999999873 33333 344568888877888888999999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHH
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 563 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 563 (611)
|..|+||++++|||+||+|||+++.++..|++.++++|+++ ++.|.++++++|.+++++ ++.+.++++
T Consensus 274 s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~ 341 (364)
T cd03814 274 SRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMAA 341 (364)
T ss_pred cccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 99999999999999999999999999999999999999987 999999999999999998 777777777
Q ss_pred HHH--HhhCCchHHHHHHHHHHH
Q 007247 564 NGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 564 ~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
++. .++|+|+.++++++++|+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 342 RARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHhhcCHHHHHHHHHHhhC
Confidence 764 368999999999999873
No 35
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.1e-32 Score=291.42 Aligned_cols=351 Identities=19% Similarity=0.232 Sum_probs=246.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++++.. + ..||.+.++..++.+|.++||+|++++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 3 3699999999999999999999999986511
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
.+.. .++. .++| |||+|.+.......
T Consensus 42 ------~~~~-----------------------------------~~~~------------~~~d-iih~~~~~~~~~~~ 67 (365)
T cd03825 42 ------ALIS-----------------------------------KIEI------------INAD-IVHLHWIHGGFLSI 67 (365)
T ss_pred ------hhhh-----------------------------------Chhc------------ccCC-EEEEEccccCccCH
Confidence 0000 0000 2699 89999866654443
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCccccc-c--cccccCCCC-CCCCcchhHhHHHh-hhccE
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS-S--FDFIDGYNK-PVRGRKINWMKAGI-LESDM 319 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~-~~~~~~~~~~k~~~-~~ad~ 319 (611)
.+..... .++|+|+++|+..+...-.. + ......+.. . ..+...+.. ......+.+.+..+ ..++.
T Consensus 68 ~~~~~~~-----~~~~~v~~~hd~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (365)
T cd03825 68 EDLSKLL-----DRKPVVWTLHDMWPFTGGCH--Y--PGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLT 138 (365)
T ss_pred HHHHHHH-----cCCCEEEEcccCcccccccC--C--ccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcE
Confidence 3332220 38899999997643211000 0 000000000 0 000000000 00001112222223 45788
Q ss_pred EEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 320 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 320 vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
++++|++..+.+.+. +.++ ..++.+|+||+|.+.|.|.. +...++.++++.
T Consensus 139 ~v~~s~~~~~~~~~~--~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~- 189 (365)
T cd03825 139 IVAPSRWLADCARSS--SLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPA- 189 (365)
T ss_pred EEehhHHHHHHHHhc--cccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCC-
Confidence 999999999888752 2222 23899999999998886543 345566777764
Q ss_pred CCCcEEEEEcCccc--ccCHHHHHHHHHhccc---CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC-hHHHHHH
Q 007247 400 RNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHMI 473 (611)
Q Consensus 400 ~~~~~il~iGrl~~--~Kg~d~li~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-~~~~~~i 473 (611)
+.+++++.|+... .||++.++++++.+.+ ++++++++|.++..... ....++.+.+..+ .+.+..+
T Consensus 190 -~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 261 (365)
T cd03825 190 -DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALI 261 (365)
T ss_pred -CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHH
Confidence 3466777777665 8999999999999975 68999999998742211 2334577777777 6778889
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
++.||++++||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 262 ~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~- 330 (365)
T cd03825 262 YSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD- 330 (365)
T ss_pred HHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999999999987 889999999999999987
Q ss_pred CHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 554 ~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
++.+.++++++ ..++|||+.++++|+++|+++
T Consensus 331 -~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 331 -PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred -HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 55556665554 468899999999999999864
No 36
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1e-32 Score=292.62 Aligned_cols=272 Identities=22% Similarity=0.276 Sum_probs=212.3
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+|| +||+|....++....+.+. .++|++++.|+......... ... . . ....
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~---------~~~-~----------~-~~~~ 132 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLAL---------LLR-S----------R-WALY 132 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchh---------hcc-c----------c-hhHH
Confidence 699 9999976555555444443 48999999996432110000 000 0 0 0011
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
....+..++.+|.++++|+..++.+.. +|.+.+ ++.+++||+|.+.+.+...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 234456678999999999999999886 455433 7999999999887765321
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHH--CCCceEEe
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGV 462 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~ 462 (611)
..+.++++|+|++.+.||++.+++|++++.+ ++++|+|+|.|+ +.+.++++... ..+++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1245689999999999999999999999875 689999999886 55667777766 34678888
Q ss_pred cccChHHHHHHHHHccEEEeCCC------CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc
Q 007247 463 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 536 (611)
+..+.+.+..+++.||++++||. .|+||++++|||+||+|||+++.+|..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 88888888899999999999997 499999999999999999999999999999999999987 89
Q ss_pred cCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHH
Q 007247 537 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 537 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
.|+++++++|.+++++ ++.+.+++.++ +.++|||+..++++++
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999997 66666666655 4689999999999875
No 37
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.1e-32 Score=288.62 Aligned_cols=357 Identities=20% Similarity=0.212 Sum_probs=253.6
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... . ....|++++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~----------------~-----~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE----------------E-----LEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH----------------H-----HHhcCCeEE
Confidence 68999987644 9999999999999999999999998652211100 0 001244544
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+.... .. .....+.++++.. +|| +||+|.+........
T Consensus 56 ~~~~~~~~~---------------------~~----~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~~ 97 (365)
T cd03807 56 CLGKRPGRP---------------------DP----GALLRLYKLIRRL------------RPD-VVHTWMYHADLYGGL 97 (365)
T ss_pred EEecccccc---------------------cH----HHHHHHHHHHHhh------------CCC-EEEeccccccHHHHH
Confidence 443221100 00 1112222333322 699 899988776665555
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
..... .+.+++++.|+...... .+. ........+.....+|.++++|+
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~-------------~~~-------------~~~~~~~~~~~~~~~~~~i~~s~ 145 (365)
T cd03807 98 AARLA------GVPPVIWGIRHSDLDLG-------------KKS-------------TRLVARLRRLLSSFIPLIVANSA 145 (365)
T ss_pred HHHhc------CCCcEEEEecCCccccc-------------chh-------------HhHHHHHHHHhccccCeEEeccH
Confidence 55432 47899999996543210 000 00112233445567899999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.. ++.+.+ ++.+++||+|...+.+.... ...++++++++. +.++|
T Consensus 146 ~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~i 196 (365)
T cd03807 146 AAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLPE--DTFLI 196 (365)
T ss_pred HHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCCC--CCeEE
Confidence 99999885 344433 88999999998877654321 344566778763 55789
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHH-H--CCCceEEecccChHHHHHHHHHccEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-L--YPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~--~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
+++|++.+.||++.+++++.++.+ ++++|+|+|.+.. ...++.... . ..+++.+.+. .+.+..+++.||++
T Consensus 197 ~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 272 (365)
T cd03807 197 GIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDVF 272 (365)
T ss_pred EEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCEE
Confidence 999999999999999999999876 6899999999873 222333322 2 2344555543 23466899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
++||..|++|++++|||+||+|||+++.|+..|++.+ +|+++ +++|+++++++|..++++ ++.+.+
T Consensus 273 v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 338 (365)
T cd03807 273 VLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQA 338 (365)
T ss_pred EeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHHH
Confidence 9999999999999999999999999999999999987 78887 889999999999999998 566666
Q ss_pred HHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 561 MMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 561 ~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
+++++ ..++|||+.++++|+++|+
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 339 LGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 66555 4688999999999999984
No 38
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.1e-32 Score=288.74 Aligned_cols=353 Identities=19% Similarity=0.246 Sum_probs=248.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+++++.+ ..||.+.++.+|+++|.++||+|++++........... .+....
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588888653 46999999999999999999999999865221111000 000000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+... . ....+......+.++++.. +|| |||+|..++.++...
T Consensus 54 ~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~------------~pd-iv~~~~~~~~~~~~l 96 (360)
T cd04951 54 NLNMS---K---------------------NPLSFLLALWKLRKILRQF------------KPD-VVHAHMFHANIFARL 96 (360)
T ss_pred Eeccc---c---------------------cchhhHHHHHHHHHHHHhc------------CCC-EEEEcccchHHHHHH
Confidence 11000 0 0001111112222333332 699 999998877666666
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
++... .+.+++++.|+....+.. .....+.....++.++++|+
T Consensus 97 ~~~~~------~~~~~v~~~h~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~s~ 139 (360)
T cd04951 97 LRLFL------PSPPLICTAHSKNEGGRL-------------------------------RMLAYRLTDFLSDLTTNVSK 139 (360)
T ss_pred HHhhC------CCCcEEEEeeccCchhHH-------------------------------HHHHHHHHhhccCceEEEcH
Confidence 65542 578999999964321110 01122333446788999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+... .+.+ ..++.+||||+|...+.+... ....++++++++. +.+++
T Consensus 140 ~~~~~~~~~--~~~~------~~~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~--~~~~~ 191 (360)
T cd04951 140 EALDYFIAS--KAFN------ANKSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVKN--DTFVI 191 (360)
T ss_pred HHHHHHHhc--cCCC------cccEEEEccccchhhcCcchH------------------HHHHHHHHcCcCC--CCEEE
Confidence 999988752 2222 238999999999887765421 2445677777753 55899
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+++||+.+.||++.+++++.++.+ ++++|+|+|+|+ ..+.+++....++ +++.+.+.. +.+..+++.||+++
T Consensus 192 l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v 267 (360)
T cd04951 192 LAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFV 267 (360)
T ss_pred EEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEE
Confidence 999999999999999999999876 589999999987 3455555555443 457666543 34567999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+||..|++|++++|||++|+|||+++.|+..|++.+ +|+++ +++|+++++++|.+++++. +.....+
T Consensus 268 ~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~~ 334 (360)
T cd04951 268 LSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDII 334 (360)
T ss_pred ecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHHH
Confidence 999999999999999999999999999999999987 67776 8999999999999999652 3333333
Q ss_pred HH--HHHHhhCCchHHHHHHHHHHH
Q 007247 562 MK--NGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 562 ~~--~~~~~~fsw~~~a~~~~~~~~ 584 (611)
.. +.+.++|||+.++++|+++|+
T Consensus 335 ~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 335 GARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 33 346799999999999999996
No 39
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=2.1e-32 Score=286.82 Aligned_cols=357 Identities=18% Similarity=0.208 Sum_probs=245.3
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..++|. ..||.+.++..|+++|+++||+|+++++............ ....... ...
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~------------~~~~~~~-----~~~ 62 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVI------------GVVVYGR-----PID 62 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccc------------cceeecc-----ccc
Confidence 799999988774 6799999999999999999999999998743222110000 0000000 000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.......... . +.........+...+.+.++.. +|| +||+|.+........
T Consensus 63 ~~~~~~~~~~--------~--------~~~~~~~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 113 (359)
T cd03823 63 EVLRSALPRD--------L--------FHLSDYDNPAVVAEFARLLEDF------------RPD-VVHFHHLQGLGVSIL 113 (359)
T ss_pred cccCCCchhh--------h--------hHHHhccCHHHHHHHHHHHHHc------------CCC-EEEECCccchHHHHH
Confidence 0000000000 0 0000000011222333333332 699 899987643322222
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
..... .++|+++++|+...... .........|.++++|+
T Consensus 114 ~~~~~------~~~~~i~~~hd~~~~~~-----------------------------------~~~~~~~~~d~ii~~s~ 152 (359)
T cd03823 114 RAARD------RGIPIVLTLHDYWLICP-----------------------------------RQGLFKKGGDAVIAPSR 152 (359)
T ss_pred HHHHh------cCCCEEEEEeeeeeecc-----------------------------------hhhhhccCCCEEEEeCH
Confidence 11111 47899999996432110 00001112399999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.. ++.. ..++.+|+||+|...+.+... +. ..+.++|
T Consensus 153 ~~~~~~~~---~~~~------~~~~~vi~n~~~~~~~~~~~~---------------------------~~--~~~~~~i 194 (359)
T cd03823 153 FLLDRYVA---NGLF------AEKISVIRNGIDLDRAKRPRR---------------------------AP--PGGRLRF 194 (359)
T ss_pred HHHHHHHH---cCCC------ccceEEecCCcChhhcccccc---------------------------CC--CCCceEE
Confidence 99999886 3322 238999999999887754321 11 1355789
Q ss_pred EEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCC
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 485 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~ 485 (611)
+|+|++.+.||++.++++++++.+++++|+++|.+.......... ....++.+.+..+.+.+..+++.||++++||.
T Consensus 195 ~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~ 271 (359)
T cd03823 195 GFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSI 271 (359)
T ss_pred EEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCc
Confidence 999999999999999999999976799999999987433222221 34456888888888888899999999999998
Q ss_pred -CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 007247 486 -FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 564 (611)
Q Consensus 486 -~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~ 564 (611)
.|++|++++|||+||+|||+++.++..|++.++.+|+++ +++|+++++++|.+++++ +..+.+++++
T Consensus 272 ~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~~ 339 (359)
T cd03823 272 WPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRAG 339 (359)
T ss_pred ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHh
Confidence 699999999999999999999999999999999999987 999999999999999997 7777777777
Q ss_pred HHHhhCCchHHHHHHHHHHH
Q 007247 565 GMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 565 ~~~~~fsw~~~a~~~~~~~~ 584 (611)
+.. .++.+.++++|+++|+
T Consensus 340 ~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 340 IEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred HHH-hhhHHHHHHHHHHHhh
Confidence 643 3445999999999886
No 40
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.1e-32 Score=288.62 Aligned_cols=268 Identities=23% Similarity=0.283 Sum_probs=204.3
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+|| +||+|.....+...++... .++|+++++|+.....
T Consensus 78 ~~d-ii~~~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~---------------------------------- 115 (355)
T cd03819 78 KVD-IVHARSRAPAWSAYLAARR-------TRPPFVTTVHGFYSVN---------------------------------- 115 (355)
T ss_pred CCC-EEEECCCchhHHHHHHHHh-------cCCCEEEEeCCchhhH----------------------------------
Confidence 699 8999987665555544433 4899999999543200
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
.+.+..+..+|.++++|+...+.+.. .++.+.+ ++.+|+||+|...|.+.... ...
T Consensus 116 -~~~~~~~~~~~~vi~~s~~~~~~~~~--~~~~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~ 171 (355)
T cd03819 116 -FRYNAIMARGDRVIAVSNFIADHIRE--NYGVDPD------RIRVIPRGVDLDRFDPGAVP---------------PER 171 (355)
T ss_pred -HHHHHHHHhcCEEEEeCHHHHHHHHH--hcCCChh------hEEEecCCccccccCccccc---------------hHH
Confidence 13445577899999999999999874 2555433 89999999999887654221 111
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc--hhHHHHHHHHHHCC--CceE
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKAR 460 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~--~~v~ 460 (611)
...++++++++ ++.++++|+||+.+.||++.+++++.++.+ ++++|+|+|.++. .+.+.+.+...++. +++.
T Consensus 172 ~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (355)
T cd03819 172 ILALAREWPLP--KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVT 249 (355)
T ss_pred HHHHHHHcCCC--CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEE
Confidence 22356677665 355899999999999999999999999977 6899999999863 34455555555433 4566
Q ss_pred EecccChHHHHHHHHHccEEEeCC-CCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCH
Q 007247 461 GVAKFNIPLAHMIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 539 (611)
Q Consensus 461 ~~~~~~~~~~~~i~~~aDv~l~pS-~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~ 539 (611)
+.+. .+.+..+++.||++++|| ..|++|++++|||+||+|||+++.||..|++.++.+|+++ +++|+
T Consensus 250 ~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~ 317 (355)
T cd03819 250 FVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDA 317 (355)
T ss_pred EcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCH
Confidence 6655 445668999999999999 7899999999999999999999999999999999999987 99999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHH
Q 007247 540 AAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGP 575 (611)
Q Consensus 540 ~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~ 575 (611)
++++++|..++.. +++.+.++++++ +.++|||+.+
T Consensus 318 ~~l~~~i~~~~~~-~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 318 EALAQALDQILSL-LPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred HHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999766653 155555555554 5799999863
No 41
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.2e-32 Score=285.29 Aligned_cols=349 Identities=20% Similarity=0.251 Sum_probs=243.7
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+.+|+|. .||.+.++..|+++|.++||+|++++.......... ...+..++
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----------------------~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE----------------------ERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh----------------------hccCceEE
Confidence 799999998885 899999999999999999999999997633211100 00111222
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+.. +.. ++. .... .......+ +. ..++| +||+|..........
T Consensus 57 ~~~~--~~~---------~~~-------~~~~-------~~~~~~~~-~~---------~~~~D-ii~~~~~~~~~~~~~ 100 (357)
T cd03795 57 RAPS--LLN---------VAS-------TPFS-------PSFFKQLK-KL---------AKKAD-VIHLHFPNPLADLAL 100 (357)
T ss_pred Eeec--ccc---------ccc-------cccc-------HHHHHHHH-hc---------CCCCC-EEEEecCcchHHHHH
Confidence 1111 000 000 0000 00000011 11 12699 899886443222222
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
.... .+.|+++++|+...... . .......+++..+..+|.++++|+
T Consensus 101 ~~~~-------~~~~~i~~~h~~~~~~~--------------~-------------~~~~~~~~~~~~~~~~d~vi~~s~ 146 (357)
T cd03795 101 LLLP-------RKKPVVVHWHSDIVKQK--------------L-------------LLKLYRPLQRRFLRRADAIVATSP 146 (357)
T ss_pred HHhc-------cCceEEEEEcChhhccc--------------h-------------hhhhhhHHHHHHHHhcCEEEeCcH
Confidence 2111 37899999995322110 0 000112345667889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
.+.+.+.....+. .++.+||||+|...+.+.... .. .....+ .+.++|
T Consensus 147 ~~~~~~~~~~~~~---------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~i 194 (357)
T cd03795 147 NYAETSPVLRRFR---------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPFF 194 (357)
T ss_pred HHHHHHHHhcCCc---------cceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcEE
Confidence 9999776421111 278999999999887654210 00 111222 355799
Q ss_pred EEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEEEeC
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
+|+||+.+.||++.+++|++++. +++|+|+|+|+ ....++++..+. ..++.+.+..+.+.+..+++.||++++|
T Consensus 195 ~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 195 LFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred EEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeC
Confidence 99999999999999999999996 89999999987 455666665433 3578888888888888999999999999
Q ss_pred CC--CCCCcHHHHHHHHcCCceEEcCCcccccceec-CcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHH
Q 007247 484 SR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (611)
Q Consensus 484 S~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 560 (611)
|. .|+||++++|||+||+|||+++.++..+.+.+ +++|+++ +++|+++++++|..++++ ++.+.+
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~~ 338 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRER 338 (357)
T ss_pred CcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHHH
Confidence 96 49999999999999999999999999998886 8999987 899999999999999998 666666
Q ss_pred HHHHH---HHhhCCchHHH
Q 007247 561 MMKNG---MAQDLSWKGPA 576 (611)
Q Consensus 561 ~~~~~---~~~~fsw~~~a 576 (611)
|++++ +.+.|||+.++
T Consensus 339 ~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 339 LGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHhcchHhhC
Confidence 66665 46899999763
No 42
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=6.2e-32 Score=303.44 Aligned_cols=283 Identities=14% Similarity=0.135 Sum_probs=200.8
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEE-EEecCccccccCcccccccCCCcccccccccccCCCCCCCCc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~-~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
+|| |||+|.....++....... .++|+|+ +.|+..... . +..+ ..
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~~~-~----------~~~~---------------~~ 445 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPPVD-R----------PDRY---------------RV 445 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcccc-c----------hhHH---------------HH
Confidence 699 9999987776666665554 3678776 556432100 0 0000 00
Q ss_pred chhHhHHHhh--hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhcc
Q 007247 306 KINWMKAGIL--ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (611)
Q Consensus 306 ~~~~~k~~~~--~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (611)
.+......+. .++.++++|...++.+.. .+|++.+ ++.+||||+|...|.+.+.
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~---------------- 501 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDA---------------- 501 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCch----------------
Confidence 0111111222 345777778888777764 2455544 8999999999887764321
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--Cce
Q 007247 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 459 (611)
Q Consensus 384 ~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v 459 (611)
....+..+.....++.++|+++||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++
T Consensus 502 ---~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 502 ---CTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 0111111111112345789999999999999999999998865 789999999987 5667777777654 556
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccC-
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD- 538 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d- 538 (611)
.+.+. .. .+..+|+.+|++++||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|+++ +++|
T Consensus 577 ~flG~-~~-dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~ 644 (694)
T PRK15179 577 LFTGL-SR-RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTV 644 (694)
T ss_pred EEcCC-cc-hHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCC
Confidence 66554 33 45679999999999999999999999999999999999999999999999999987 7766
Q ss_pred -HHHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 539 -VAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 539 -~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
.++++++|.+++.+.. .+.+.+.+++...++|||+.++++|+++|+
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4689999988887532 233444444445689999999999999995
No 43
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=3.1e-32 Score=286.38 Aligned_cols=366 Identities=22% Similarity=0.244 Sum_probs=246.9
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|++.++| ..||.+.++.+|+++|+++||+|+++++............ .....
T Consensus 1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 79999998876 4899999999999999999999999997643222110000 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCC-ccchHH-
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIP- 243 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~-~~~~~~- 243 (611)
..... ... ......+ .+............ .++| +||+|+. ......
T Consensus 57 ~~~~~--~~~------------------~~~~~~~-~~~~~~~~~~~~~~----------~~~d-ii~~~~~~~~~~~~~ 104 (375)
T cd03821 57 LFSIN--VAY------------------GLNLARY-LFPPSLLAWLRLNI----------READ-IVHVHGLWSYPSLAA 104 (375)
T ss_pred ecccc--hhh------------------hhhhhhh-ccChhHHHHHHHhC----------CCCC-EEEEecccchHHHHH
Confidence 00000 000 0000000 00001111111111 2589 8999873 322222
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
..+... .+.|++++.|+........ ...+.. . .......+..+..++.++++
T Consensus 105 ~~~~~~-------~~~~~i~~~~~~~~~~~~~---------~~~~~~----------~--~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 105 ARAARK-------YGIPYVVSPHGMLDPWALP---------HKALKK----------R--LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHH-------hCCCEEEEccccccccccc---------cchhhh----------H--HHHHHHHHHHHhcCCEEEEC
Confidence 222222 4889999999643211100 000000 0 00112234566789999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|.......... . ...++.+||||+|...+.+... ... ++..+.+ .+.+
T Consensus 157 s~~~~~~~~~~----~------~~~~~~vi~~~~~~~~~~~~~~-------------------~~~-~~~~~~~--~~~~ 204 (375)
T cd03821 157 SEQEAAEIRRL----G------LKAPIAVIPNGVDIPPFAALPS-------------------RGR-RRKFPIL--PDKR 204 (375)
T ss_pred CHHHHHHHHhh----C------CcccEEEcCCCcChhccCcchh-------------------hhh-hhhccCC--CCCc
Confidence 98877766531 1 1237999999999988765431 111 4444443 3568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+|+|+||+.+.||++.+++++.++.+ ++++|+|+|.+...+...++.+..++ .+++.+.+..+.+.+..+++.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999987 69999999998766666666654433 356888888887888889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
+++||..|+||++++|||+||+|||+++.||..|++.+ .+|++. +.+.++++++|.+++++ +..+.
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~ 350 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLK 350 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999999999999999999999998 788874 45669999999999998 55555
Q ss_pred HHHHHH---HHhhCCchHHHHHHHH
Q 007247 560 EMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 560 ~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
++++++ +.++|||+.++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 565554 4799999999998863
No 44
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=9.9e-32 Score=283.78 Aligned_cols=382 Identities=20% Similarity=0.208 Sum_probs=257.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ .......|++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999988775 499999999999999999999999997633222110000 011123455555
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-ch-HH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SL-IP 243 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~-~~ 243 (611)
.+........ . +.....++..+.......... .. .+|| +||+|.+.. .. ..
T Consensus 64 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~-~~---------~~~D-~v~~~~~~~~~~~~~ 116 (394)
T cd03794 64 RVPLPPYKKN-------G---------LLKRLLNYLSFALSALLALLK-RR---------RRPD-VIIATSPPLLIALAA 116 (394)
T ss_pred EEecCCCCcc-------c---------hHHHHHhhhHHHHHHHHHHHh-cc---------cCCC-EEEEcCChHHHHHHH
Confidence 4432211110 0 111112222222222222221 11 2699 888886322 22 22
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
..++.. .++|+++++|+..+....... ..... .........+++..+..+|.++++
T Consensus 117 ~~~~~~-------~~~~~i~~~h~~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 117 LLLARL-------KGAPFVLEVRDLWPESAVALG-----LLKNG------------SLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred HHHHHh-------cCCCEEEEehhhcchhHHHcc-----Ccccc------------chHHHHHHHHHHHHHhcCCEEEEE
Confidence 223322 488999999975432111000 00000 000011223456678899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+..++.+.. ++.. ..++.+|+||+|...+.+.... .. +..... ..+.+
T Consensus 173 s~~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~--~~~~~ 221 (394)
T cd03794 173 SPGMREYLVR---RGVP------PEKISVIPNGVDLELFKPPPAD-------------------ES-LRKELG--LDDKF 221 (394)
T ss_pred CHHHHHHHHh---cCCC------cCceEEcCCCCCHHHcCCccch-------------------hh-hhhccC--CCCcE
Confidence 9999998873 3333 2389999999998877654321 01 222222 23567
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHH-CCCceEEecccChHHHHHHHHHccEEE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+|+|++.++||++.+++++.++.+ ++++|+|+|.|+ ..+.++++... ...++.+.+..+.+.+..+++.||+++
T Consensus 222 ~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 299 (394)
T cd03794 222 VVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGL 299 (394)
T ss_pred EEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeE
Confidence 99999999999999999999999976 489999999987 34444443322 235688888778888889999999999
Q ss_pred eCCCCCCC-----cHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 482 IPSRFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 482 ~pS~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
+||..|++ |++++|||+||+|||+++.++..+.+.++.+|+++ +++|+++++++|.+++.+ ++
T Consensus 300 ~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~ 367 (394)
T cd03794 300 VPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PE 367 (394)
T ss_pred EeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hH
Confidence 99998875 88899999999999999999999999998999987 889999999999999987 66
Q ss_pred HHHHHHHHH---HHhhCCchHHHHHHH
Q 007247 557 ALAEMMKNG---MAQDLSWKGPAKKWE 580 (611)
Q Consensus 557 ~~~~~~~~~---~~~~fsw~~~a~~~~ 580 (611)
.+.++++++ ..++|||+.++++|+
T Consensus 368 ~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 368 ERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 666666665 357999999998873
No 45
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=1.2e-31 Score=282.38 Aligned_cols=341 Identities=21% Similarity=0.240 Sum_probs=246.1
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+|++..|+| |.+.++.+++.+|.++||+|.++++........... ..
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~--------------~~------------ 49 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPE--------------DR------------ 49 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccccc--------------cc------------
Confidence 79999998644 377899999999999999999999874322111000 00
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
..+.... +... .+ ........+.+.+.. .++| +||+|..........
T Consensus 50 --~~~~~~~------------------~~~~--~~-~~~~~~~~~~~~~~~---------~~~D-ii~~~~~~~~~~~~~ 96 (355)
T cd03799 50 --AELARTR------------------YLAR--SL-ALLAQALVLARELRR---------LGID-HIHAHFGTTPATVAM 96 (355)
T ss_pred --ccccchH------------------HHHH--HH-HHHHHHHHHHHHHHh---------cCCC-EEEECCCCchHHHHH
Confidence 0000000 0000 11 111111222222211 2699 999997655444444
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+.... .+.|+++++|+...... ....+++..+..+|.++++|+
T Consensus 97 ~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 97 LASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAISE 139 (355)
T ss_pred HHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECCH
Confidence 44332 37899999995322100 001356777889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
..++.+.+. ++... .++.+|+||+|...+.+... ....+.+.|
T Consensus 140 ~~~~~l~~~--~~~~~------~~~~vi~~~~d~~~~~~~~~-----------------------------~~~~~~~~i 182 (355)
T cd03799 140 YNRQQLIRL--LGCDP------DKIHVVHCGVDLERFPPRPP-----------------------------PPPGEPLRI 182 (355)
T ss_pred HHHHHHHHh--cCCCc------ccEEEEeCCcCHHHcCCccc-----------------------------cccCCCeEE
Confidence 999999862 23332 28999999999887765420 011245789
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+|++.+.||++.+++++.++.+ ++++|+++|.++ ..+.++++..++ +.++.+.+..+.+.+..+++.||+++
T Consensus 183 ~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l 260 (355)
T cd03799 183 LSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFV 260 (355)
T ss_pred EEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEE
Confidence 999999999999999999999876 589999999987 344555555543 45688888888888889999999999
Q ss_pred eCCCC------CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCH
Q 007247 482 IPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555 (611)
Q Consensus 482 ~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~ 555 (611)
+||.. |++|++++|||++|+|+|+++.|+..|+++++.+|+++ +++|+++++++|.+++++ +
T Consensus 261 ~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~ 328 (355)
T cd03799 261 LPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD--P 328 (355)
T ss_pred ecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 99999 99999999999999999999999999999999999987 889999999999999998 6
Q ss_pred HHHHHHHHHH---HHhhCCchHHHHH
Q 007247 556 QALAEMMKNG---MAQDLSWKGPAKK 578 (611)
Q Consensus 556 ~~~~~~~~~~---~~~~fsw~~~a~~ 578 (611)
..+.++++++ +.++|||+..+++
T Consensus 329 ~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 329 ELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 6677777665 4689999998875
No 46
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=5.4e-32 Score=285.78 Aligned_cols=348 Identities=15% Similarity=0.116 Sum_probs=235.8
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+++++.+ + .||.+.++.+++++|.+.||+|+++++..... .+.. .....|+.++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 799999875 3 69999999999999999999999999874321 0000 0011133333
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+... . .+..+ +...+.++++. .+|| +||+|......++..
T Consensus 57 ~~~~~--~---------------------~~~~~---~~~~~~~~~~~------------~~~D-vv~~~~~~~~~~~~~ 97 (358)
T cd03812 57 YIPAR--K---------------------KNPLK---YFKKLYKLIKK------------NKYD-IVHVHGSSASGFILL 97 (358)
T ss_pred EecCC--C---------------------ccHHH---HHHHHHHHHhc------------CCCC-EEEEeCcchhHHHHH
Confidence 22110 0 00111 11122222222 2699 999998765555554
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+.... ....++++.|+..+...+.. .. .....+.+.....+|.++++|+
T Consensus 98 ~~~~~------~~~~~v~~~~~~~~~~~~~~-----------------------~~--~~~~~~~~~~~~~~~~~i~~s~ 146 (358)
T cd03812 98 AAKKA------GVKVRIAHSHNTSDSHDKKK-----------------------KI--LKYKVLRKLINRLATDYLACSE 146 (358)
T ss_pred HHhhC------CCCeEEEEeccccccccccc-----------------------hh--hHHHHHHHHHHhcCCEEEEcCH
Confidence 44432 23445777886443211100 00 0001233456678999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+... .. ..++.+||||+|.+.+.+.... .+. +++.+.. .+.++|
T Consensus 147 ~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~--~~~~~i 195 (358)
T cd03812 147 EAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGIL--EDKFVI 195 (358)
T ss_pred HHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCC--CCCEEE
Confidence 999988751 11 2389999999999877654320 111 3444443 356899
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+||+.++||++.+++++..+.+ ++++++|+|+|+ ..+.++++..++ .+++.+.+. .+.+..+++.||+++
T Consensus 196 ~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v 271 (358)
T cd03812 196 GHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFL 271 (358)
T ss_pred EEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEE
Confidence 999999999999999999999976 699999999988 445555555444 356766655 344667999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+||++|++|++++|||++|+|||+|+.||..|++.++ .|++. .++++++++++|.+++++ ++....+
T Consensus 272 ~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~~ 338 (358)
T cd03812 272 FPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL-VKFLS----------LDESPEIWAEEILKLKSE--DRRERSS 338 (358)
T ss_pred ecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEe----------CCCCHHHHHHHHHHHHhC--cchhhhh
Confidence 9999999999999999999999999999999999984 55554 677899999999999998 6666666
Q ss_pred HHHHHHhhCCchHH
Q 007247 562 MKNGMAQDLSWKGP 575 (611)
Q Consensus 562 ~~~~~~~~fsw~~~ 575 (611)
..++..+..+++..
T Consensus 339 ~~~~~~~~~~~~~~ 352 (358)
T cd03812 339 ESIKKKGLDADDEA 352 (358)
T ss_pred hhhhhccchhhhhh
Confidence 66655444444443
No 47
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=3.8e-31 Score=276.06 Aligned_cols=367 Identities=26% Similarity=0.364 Sum_probs=260.6
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..++|. .||.+.++..|+++|.+.||+|.++++........... . .....
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~---------------~-------~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV---------------G-------GIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee---------------c-------Cccee
Confidence 799999987774 79999999999999999999999999874432221000 0 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
. .... . . .........+.......++. .++| +||+|.+........
T Consensus 57 ~--~~~~-~--------~----------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~~ 102 (374)
T cd03801 57 R--PPPL-L--------R----------VRRLLLLLLLALRLRRLLRR------------ERFD-VVHAHDWLALLAAAL 102 (374)
T ss_pred c--CCcc-c--------c----------cchhHHHHHHHHHHHHHhhh------------cCCc-EEEEechhHHHHHHH
Confidence 0 0000 0 0 00000111112222222222 1599 899988777655543
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+... .++|+++++|+..+...... .. ........+.+..+..+|.++++|+
T Consensus 103 ~~~~-------~~~~~i~~~h~~~~~~~~~~---------~~-------------~~~~~~~~~~~~~~~~~d~~i~~s~ 153 (374)
T cd03801 103 AARL-------LGIPLVLTVHGLEFGRPGNE---------LG-------------LLLKLARALERRALRRADRIIAVSE 153 (374)
T ss_pred HHHh-------cCCcEEEEeccchhhccccc---------hh-------------HHHHHHHHHHHHHHHhCCEEEEecH
Confidence 3332 58999999997654221100 00 0001122345667889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.+. ++.+. .++.+++||+|...+.+.. ...+..... ..+.++|
T Consensus 154 ~~~~~~~~~--~~~~~------~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~--~~~~~~i 202 (374)
T cd03801 154 ATREELREL--GGVPP------EKITVIPNGVDTERFRPAP---------------------RAARRRLGI--PEDEPVI 202 (374)
T ss_pred HHHHHHHhc--CCCCC------CcEEEecCcccccccCccc---------------------hHHHhhcCC--cCCCeEE
Confidence 999999862 23221 2899999999988775431 111222222 2355799
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHH--CCCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+|+|++.+.||++.+++++..+.+ ++++|+++|.+. ....++++..+ .++++.+.+..+.+.+..+++.||+++
T Consensus 203 ~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 280 (374)
T cd03801 203 LFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFV 280 (374)
T ss_pred EEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEE
Confidence 999999999999999999999876 589999999776 45555555432 345688888888788889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+|+..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++
T Consensus 281 ~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~ 348 (374)
T cd03801 281 LPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRRL 348 (374)
T ss_pred ecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHHH
Confidence 9999999999999999999999999999999999999999987 899999999999999988 6667777
Q ss_pred HHHHH---HhhCCchHHHHHHHHHHH
Q 007247 562 MKNGM---AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 562 ~~~~~---~~~fsw~~~a~~~~~~~~ 584 (611)
++++. .+.|+|+..++++.++|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 77654 799999999999999873
No 48
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=3.1e-31 Score=279.41 Aligned_cols=349 Identities=21% Similarity=0.258 Sum_probs=240.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||+||++. +|. .||.+.++..|+++|++.||+|.+++........ .... .. .+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~~~~-----------~~-------~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSL--LYGG-----------EQ-------EVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcc--cCCC-----------cc-------cceeee
Confidence 79999875 553 7999999999999999999999999876321111 0000 00 000000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH-
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC- 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~- 244 (611)
.. + +. .....+.+.++. .+|| +||+|.|...+.+.
T Consensus 58 ~~-----------------~----------~~----~~~~~~~~~~~~------------~~~d-ii~~~~~~~~~~~~~ 93 (366)
T cd03822 58 VL-----------------D----------NP----LDYRRAARAIRL------------SGPD-VVVIQHEYGIFGGEA 93 (366)
T ss_pred ec-----------------C----------Cc----hhHHHHHHHHhh------------cCCC-EEEEeeccccccchh
Confidence 00 0 00 001112222222 1699 88888755432222
Q ss_pred --HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEe
Q 007247 245 --YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (611)
Q Consensus 245 --~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (611)
.+....+ ..+.|+|+++|+...... ......+++..+..+|.+++
T Consensus 94 ~~~~~~~~~----~~~~~~i~~~h~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~ii~ 140 (366)
T cd03822 94 GLYLLLLLR----GLGIPVVVTLHTVLLHEP-----------------------------RPGDRALLRLLLRRADAVIV 140 (366)
T ss_pred hHHHHHHHh----hcCCCEEEEEecCCcccc-----------------------------chhhhHHHHHHHhcCCEEEE
Confidence 2221110 148999999997511000 00122455667889999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 402 (611)
+|....+.+... .+ ..++.+|+||+|...+.+.. .. ++...+ .+.
T Consensus 141 ~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~---------------------~~--~~~~~~--~~~ 185 (366)
T cd03822 141 MSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPE---------------------SL--KALGGL--DGR 185 (366)
T ss_pred eeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCch---------------------hh--HhhcCC--CCC
Confidence 974444444321 11 13899999999976654331 01 222222 356
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHH-------HHHHHHHCCCceEEecc-cChHHHHH
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQ-------LEQLEILYPEKARGVAK-FNIPLAHM 472 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~-------l~~l~~~~~~~v~~~~~-~~~~~~~~ 472 (611)
++|+|+|++.+.||++.+++|++++.+ ++++|+|+|.+....... ++++ ....++.+.+. .+.+.+..
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~--~~~~~v~~~~~~~~~~~~~~ 263 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERL--GLADRVIFINRYLPDEELPE 263 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhc--CCCCcEEEecCcCCHHHHHH
Confidence 799999999999999999999999976 689999999986433222 2222 23456888877 56778888
Q ss_pred HHHHccEEEeCCCCC--CCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 473 i~~~aDv~l~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
+++.||++++||.+| ++|++++|||+||+|||+++.|+ .+.+.++.+|+++ +++|+++++++|..++
T Consensus 264 ~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 264 LFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRLL 332 (366)
T ss_pred HHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999 7878888899987 8999999999999999
Q ss_pred HhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 551 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 551 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
++ +..+.+|++++. .++|||+.++++|.++|+
T Consensus 333 ~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 333 AD--PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred cC--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 97 666777777663 355999999999999873
No 49
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=2.9e-31 Score=279.15 Aligned_cols=365 Identities=23% Similarity=0.295 Sum_probs=252.4
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..|+|. .||.+..+..++++|+++||+|+++++........... . ++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~--------------~--------~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV--------------V--------VVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc--------------c--------ccccc
Confidence 799999988885 89999999999999999999999999875433221000 0 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-chHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPC 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~~~~ 244 (611)
..... +..+ ....+ .+...+...++. .+|| +||+|.... .....
T Consensus 57 ~~~~~-~~~~--------------------~~~~~-~~~~~~~~~~~~------------~~~D-iv~~~~~~~~~~~~~ 101 (374)
T cd03817 57 RVPTF-KYPD--------------------FRLPL-PIPRALIIILKE------------LGPD-IVHTHTPFSLGLLGL 101 (374)
T ss_pred ccccc-hhhh--------------------hhccc-cHHHHHHHHHhh------------cCCC-EEEECCchhhhhHHH
Confidence 00000 0000 00000 111122222222 2699 888886433 33333
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch-hHhHHHhhhccEEEec
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTV 323 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~v 323 (611)
.+.+. .++|+++++|+....- .......... ...... .+++..+..+|.++++
T Consensus 102 ~~~~~-------~~~~~i~~~~~~~~~~------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 102 RVARK-------LGIPVVATYHTMYEDY------THYVPLGRLL-------------ARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HHHHH-------cCCCEEEEecCCHHHH------HHHHhcccch-------------hHHHHHHHHHHHHhhhCCEEEec
Confidence 33333 4899999999653200 0000000000 000111 4567778899999999
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
|+..++.+.. ++.. .++.+++||+|...+.+... ...++++++. .+.+
T Consensus 156 s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~~ 203 (374)
T cd03817 156 SEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVDG--------------------DDERRKLGIP--EDEP 203 (374)
T ss_pred cHHHHHHHHh---cCCC-------CceEEcCCccchhccCccch--------------------hHHHHhcCCC--CCCe
Confidence 9999888875 3322 26899999999887765431 1224455544 3557
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+|+++|++.+.||++.++++++++.+ ++++|+++|.|+ ..+.++++..++ .+++.+.+..+.+.+..+++.||+
T Consensus 204 ~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (374)
T cd03817 204 VLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAADL 281 (374)
T ss_pred EEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCE
Confidence 89999999999999999999999876 689999999987 455566655443 356888888888888899999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
+++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++ ++.|. +++++|.+++++ ++.+.
T Consensus 282 ~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~~ 348 (374)
T cd03817 282 FVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELRR 348 (374)
T ss_pred EEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHHH
Confidence 999999999999999999999999999999999999999999987 77777 999999999998 66667
Q ss_pred HHHHHHH--HhhCCchHHHHHHHHHHHH
Q 007247 560 EMMKNGM--AQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 560 ~~~~~~~--~~~fsw~~~a~~~~~~~~~ 585 (611)
+|++++. .++++ .+++++++|++
T Consensus 349 ~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 349 RLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 7777764 34444 67777777765
No 50
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.5e-31 Score=286.31 Aligned_cols=229 Identities=14% Similarity=0.106 Sum_probs=181.5
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
+.....+|.|+++|++.++.+.+. ++. ..++.+++||+|...+...+.
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~-------~~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRI-------PERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCC-------CCCeEEEcCCCCHHHcccCCc-----------------------
Confidence 344578999999999999988752 222 127889999998765532110
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----chhHHHHHHHHHHC--CCc
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEK 458 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~ 458 (611)
....+.+.++++||++++||++.+|+|+.++.+ ++++|+|+|++. .++.+.++++..++ .++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 011244689999999999999999999988643 589999999974 23456677777665 467
Q ss_pred eEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc-cceec---CcceEEecccccccccC
Q 007247 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 534 (611)
Q Consensus 459 v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~l~~~~~~~~~~v 534 (611)
+.+.+..+.+++..+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 888888888888899999999999999999999999999999999999999965 77765 6789964
Q ss_pred CccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHcC
Q 007247 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 590 (611)
Q Consensus 535 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~~~ 590 (611)
.|+++++++|.+++++ +++.+.+|++++. .++|||+.++++|++.++++++.+
T Consensus 407 --~~~~~la~ai~~ll~~-~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 --TTVEEYADAILEVLRM-RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred --CCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 4999999999999985 2455566666653 477999999999999999988754
No 51
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.5e-31 Score=281.69 Aligned_cols=360 Identities=19% Similarity=0.195 Sum_probs=251.4
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..+.|. ..||+++++.+|+++|++.||+|+++++............ .. ...
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~-------------~~--------~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR-------------AA--------LRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch-------------hc--------ccc-
Confidence 689999887772 4899999999999999999999999998744322211000 00 000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
...... .....++............. .++| +||+|.+.....
T Consensus 58 -~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~--- 99 (365)
T cd03809 58 -LLRLPR---------------------RLLWGLLFLLRAGDRLLLLL------------LGLD-LLHSPHNTAPLL--- 99 (365)
T ss_pred -cccccc---------------------ccccchhhHHHHHHHHHhhh------------cCCC-eeeecccccCcc---
Confidence 000000 00000111111111111111 1699 899987665544
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+ ..++|+++++|+..+.... ..... ........+++..+..+|.++++|+
T Consensus 100 -~--------~~~~~~i~~~hd~~~~~~~-----------~~~~~----------~~~~~~~~~~~~~~~~~d~~i~~s~ 149 (365)
T cd03809 100 -R--------LRGVPVVVTIHDLIPLRFP-----------EYFSP----------GFRRYFRRLLRRALRRADAIITVSE 149 (365)
T ss_pred -c--------CCCCCEEEEeccchhhhCc-----------ccCCH----------HHHHHHHHHHHHHHHHcCEEEEccH
Confidence 1 1589999999976432110 00000 0001123455778889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
..++.+.+. ++.+. .++.+++||+|...+.+... . . +...... .+.++|
T Consensus 150 ~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~-------------------~-~-~~~~~~~--~~~~~i 198 (365)
T cd03809 150 ATKRDLLRY--LGVPP------DKIVVIPLGVDPRFRPPPAE-------------------A-E-VLRALYL--LPRPYF 198 (365)
T ss_pred HHHHHHHHH--hCcCH------HHEEeeccccCccccCCCch-------------------H-H-HHHHhcC--CCCCeE
Confidence 999998862 33322 38999999999887765432 1 1 2222222 355799
Q ss_pred EEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCCchhHHHHHHHH-HHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~-~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+|+|++.+.||++.+++++.++.+. +++|+++|.+........+.+. ....+++.+.+..+.+.+..+++.||++++
T Consensus 199 ~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 278 (365)
T cd03809 199 LYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVF 278 (365)
T ss_pred EEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcc
Confidence 9999999999999999999999874 6999999987654444433321 224467888888888888899999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~ 562 (611)
||.+|++|++++|||++|+|||+++.|++.|++.+ +|+++ ++.|.++++++|.+++.+ ++.+.+++
T Consensus 279 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~ 344 (365)
T cd03809 279 PSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREELR 344 (365)
T ss_pred cchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHHH
Confidence 99999999999999999999999999999999854 57765 889999999999999987 77777777
Q ss_pred HHH--HHhhCCchHHHHHHHH
Q 007247 563 KNG--MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 563 ~~~--~~~~fsw~~~a~~~~~ 581 (611)
+++ ..++|||+..++++++
T Consensus 345 ~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 345 ERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHHHhCCHHHHHHHHhC
Confidence 766 4688999999998863
No 52
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=5.2e-31 Score=285.19 Aligned_cols=218 Identities=17% Similarity=0.143 Sum_probs=172.3
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
+++..+..+|.++++|++..+.+.+. ++. ..++.+|+||+|++.+.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~-------~~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKR-------NTKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCc-------CCCcEEEcCCCCHHHhccccc---------------------
Confidence 45667789999999999999998752 221 127899999999877654321
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C-----CcEEEEEeCCCc----hhHHHHHHHHHHC--
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILY-- 455 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~-----~~~lvivG~g~~----~~~~~l~~l~~~~-- 455 (611)
. ...+.++|+|+||+++.||++.+++|++++.+ + +++|+|+|++.. .+.+.+++++.++
T Consensus 232 ------~--~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 ------D--EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred ------c--cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 0 11245799999999999999999999999875 2 599999998742 3566777777664
Q ss_pred CCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccc-cccee---cCcceEEeccccccc
Q 007247 456 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 531 (611)
Q Consensus 456 ~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~v~---~g~~G~l~~~~~~~~ 531 (611)
.+++.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 35788888888888889999999999999999999999999999999999999875 57887 89999985
Q ss_pred ccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHH
Q 007247 532 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAK 577 (611)
Q Consensus 532 ~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~ 577 (611)
.|+++++++|.+++++. +..+..+.+++ ..++|||+...+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 39999999999999973 22333333322 468899998653
No 53
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4.2e-31 Score=284.18 Aligned_cols=227 Identities=12% Similarity=0.173 Sum_probs=174.3
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH--
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE-- 393 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 393 (611)
.+| ++++|....+.+.+. ++++.+ ++.+||||+|...|.|.... ....+..
T Consensus 339 ~sd-~v~~s~~v~~~l~~~--lgip~~------KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~ 391 (578)
T PRK15490 339 GVD-FMSNNHCVTRHYADW--LKLEAK------HFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFT 391 (578)
T ss_pred cch-hhhccHHHHHHHHHH--hCCCHH------HEEEEeCCcchhhcCccchh------------------hHHHHHHhh
Confidence 445 677888888887652 455544 89999999999888765321 1112222
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPL 469 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~ 469 (611)
.+++ ++.++|+++||+.++||++.+++++.++.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+. .+.
T Consensus 392 ~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~FlG~--~~D 465 (578)
T PRK15490 392 QKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFVGA--SRD 465 (578)
T ss_pred hccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEECCC--hhh
Confidence 2333 244789999999999999999999988765 689999999997 5667777776654 55766654 344
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHH-
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR- 548 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~- 548 (611)
+..+|+.+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ +++|++++++++..
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV----------p~~D~~aLa~ai~lA 535 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL----------DDAQTVNLDQACRYA 535 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE----------CCCChhhHHHHHHHH
Confidence 6679999999999999999999999999999999999999999999999999987 88998888887633
Q ss_pred --HHHhcC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 549 --ALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 549 --ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
+.+... ...+.+.+++.+.++|||+.++++|+++|.+
T Consensus 536 ~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 536 EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 333211 1123334444467899999999999999974
No 54
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2.1e-30 Score=280.36 Aligned_cols=284 Identities=15% Similarity=0.128 Sum_probs=196.1
Q ss_pred CCCeEEEecCCcc---chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCC
Q 007247 227 GEDVVFVANDWHT---SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 303 (611)
Q Consensus 227 ~~Dvivh~hd~~~---~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (611)
+|| +||+|.... +.++.+++.. .++|+|+++|+..+. .. .++... ..+..
T Consensus 95 ~~D-vi~~~~~~~~~~~~~a~~~~~~-------~~~~~V~~~h~~~~~-~~------~~~~~~------------~~~~~ 147 (415)
T cd03816 95 PAD-YILIQNPPSIPTLLIAWLYCLL-------RRTKLIIDWHNYGYT-IL------ALKLGE------------NHPLV 147 (415)
T ss_pred CCC-EEEEeCCCCchHHHHHHHHHHH-------hCCeEEEEcCCchHH-HH------hcccCC------------CCHHH
Confidence 699 888886333 2233333443 488999999965321 00 000000 00000
Q ss_pred CcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhcc
Q 007247 304 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (611)
Q Consensus 304 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (611)
.....+.+..++.+|.|+++|+.+++.+.+ +|.+.+ ++.+|+||. ...|.|....
T Consensus 148 ~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~--------------- 202 (415)
T cd03816 148 RLAKWYEKLFGRLADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE--------------- 202 (415)
T ss_pred HHHHHHHHHHhhcCCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH---------------
Confidence 011223355667899999999999999875 454433 899999994 4556554311
Q ss_pred HHHHHHHHH-------------HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--------CCcEEEEEeCCCc
Q 007247 384 PLLKEALQA-------------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKK 442 (611)
Q Consensus 384 ~~~~~~~~~-------------~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--------~~~~lvivG~g~~ 442 (611)
.....+.+ ..++.. ++.++++++||+.++||++.|++|++.+.+ ++++|+|+|+|+
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~- 279 (415)
T cd03816 203 -EKHELFLKLAKTFLTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP- 279 (415)
T ss_pred -HHHHHHHhccccccccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc-
Confidence 00111111 112222 234678889999999999999999999853 479999999998
Q ss_pred hhHHHHHHHHHHCC-CceEEecc-cChHHHHHHHHHccEEEeCCC---CCCCcHHHHHHHHcCCceEEcCCcccccceec
Q 007247 443 PMEKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 517 (611)
Q Consensus 443 ~~~~~l~~l~~~~~-~~v~~~~~-~~~~~~~~i~~~aDv~l~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 517 (611)
..+.++++..+++ .++.++.+ .+.+.+..+|+.||+++.|+. .|++|++++|||+||+|||+++.||..|++++
T Consensus 280 -~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~ 358 (415)
T cd03816 280 -LKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH 358 (415)
T ss_pred -cHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC
Confidence 4667777766654 34665543 577888899999999987533 47899999999999999999999999999999
Q ss_pred CcceEEecccccccccCCccCHHHHHHHHHHHHHhc-CHHHHHHHHHHHHH-hhCCchHHHHH
Q 007247 518 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMA-QDLSWKGPAKK 578 (611)
Q Consensus 518 g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~-~~fsw~~~a~~ 578 (611)
+.+|+++ + |+++++++|..++++. .++.+.+|++++.+ .+++|+...++
T Consensus 359 ~~~G~lv----------~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~ 409 (415)
T cd03816 359 GENGLVF----------G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDENWDR 409 (415)
T ss_pred CCCEEEE----------C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHHHHH
Confidence 9999986 3 8999999999999862 25677888888753 45666654443
No 55
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.8e-30 Score=272.08 Aligned_cols=372 Identities=23% Similarity=0.303 Sum_probs=257.0
Q ss_pred EEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007247 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (611)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (611)
|++++..++|. ..||.+.++..++.+|.+.||+|+++++............... .. ....
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~------------~~-----~~~~-- 60 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL------------VG-----VERL-- 60 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc------------cc-----cccc--
Confidence 67888876552 4699999999999999999999999997633222210000000 00 0000
Q ss_pred EeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCcc-chHHHH
Q 007247 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPCY 245 (611)
Q Consensus 167 i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~-~~~~~~ 245 (611)
........ ..........+...+...++... +++| +||+|.... ..+...
T Consensus 61 -~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~----------~~~d-ii~~~~~~~~~~~~~~ 111 (377)
T cd03798 61 -PVLLPVVP-----------------LLKGPLLYLLAARALLKLLKLKR----------FRPD-LIHAHFAYPDGFAAAL 111 (377)
T ss_pred -ccCcchhh-----------------ccccchhHHHHHHHHHHHHhccc----------CCCC-EEEEeccchHHHHHHH
Confidence 00000000 00011112223333333333111 2699 788874332 333333
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+... .++|+++++|+........ .......++..+..+|.++++|+
T Consensus 112 ~~~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 112 LKRK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred HHHh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCCH
Confidence 3333 4689999999754421100 00123456777889999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
..++.+.+ .+.. ..++.+++||+|...+.+.... . . ...+. ..+.+++
T Consensus 158 ~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~------------------~-~--~~~~~--~~~~~~i 205 (377)
T cd03798 158 ALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA------------------E-A--RKLGL--PEDKKVI 205 (377)
T ss_pred HHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH------------------H-H--HhccC--CCCceEE
Confidence 99999886 2222 2389999999999888765321 0 0 22222 2356799
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHH--CCCceEEecccChHHHHHHHHHccEEE
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
+++|++.+.||++.++++++.+.+ ++++|+|+|.++ ..+.++++... ...++...+..+.+.+..+++.||+++
T Consensus 206 ~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 206 LFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred EEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeee
Confidence 999999999999999999999976 589999999987 33445454443 235688888888888889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 561 (611)
+||..|++|++++|||++|+|||+++.|+..+++.++.+|+++ ++.|+++++++|.+++++... .....
T Consensus 284 ~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~~ 352 (377)
T cd03798 284 LPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGRA 352 (377)
T ss_pred cchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhHH
Confidence 9999999999999999999999999999999999999999987 999999999999999998332 23333
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 562 MKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 562 ~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
+.....+.|||+..++++.++|+++
T Consensus 353 ~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 353 ARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 4444679999999999999999764
No 56
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.1e-31 Score=295.30 Aligned_cols=287 Identities=17% Similarity=0.209 Sum_probs=215.6
Q ss_pred CCCeEEEecCCcc-chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCc
Q 007247 227 GEDVVFVANDWHT-SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (611)
Q Consensus 227 ~~Dvivh~hd~~~-~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
++| |+|+|.... +++++.++.. .++|+|+|.|++....+.. ++....+...... ..+...
T Consensus 173 ~~d-viH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~~~~~~~~~~~~---------~~~~~~ 233 (475)
T cd03813 173 KAD-VYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--ELLQADWEMSYFR---------RLWIRF 233 (475)
T ss_pred CCC-EEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HHHhcccchHHHH---------HHHHHH
Confidence 689 999996432 3444555544 4899999999764422110 0000000000000 000001
Q ss_pred chhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHH
Q 007247 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (611)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 385 (611)
...+.+..++.||.|+++|+...+.+.. +|.+.+ ++.+||||+|.+.|.+....
T Consensus 234 ~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~----------------- 287 (475)
T cd03813 234 FESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA----------------- 287 (475)
T ss_pred HHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc-----------------
Confidence 1123456778999999999999887764 565544 89999999999888664210
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC--chhHHHHHHHHHHCC--Cce
Q 007247 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EKA 459 (611)
Q Consensus 386 ~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~--~~~~~~l~~l~~~~~--~~v 459 (611)
. ..++.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+++ +.+.+.++++..+++ +++
T Consensus 288 ---------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V 356 (475)
T cd03813 288 ---------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNV 356 (475)
T ss_pred ---------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeE
Confidence 0 12356899999999999999999999999876 799999999984 457777888777654 567
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec------CcceEEeccccccccc
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEA 533 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~~ 533 (611)
.+.+ .+.+..+++.+|++++||..|+||++++|||+||+|||+|+.||+.|++.+ |.+|+++
T Consensus 357 ~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv--------- 424 (475)
T cd03813 357 KFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV--------- 424 (475)
T ss_pred EEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE---------
Confidence 7776 344567999999999999999999999999999999999999999999998 6799987
Q ss_pred CCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 534 VDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 534 v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|.++|+
T Consensus 425 -~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 -PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred -CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 66666776665 4688999999999999984
No 57
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=1.1e-30 Score=271.31 Aligned_cols=339 Identities=21% Similarity=0.221 Sum_probs=234.2
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..+.| .||.+.++..|+++|++.||+|++++..... ...+. ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 69999987655 6999999999999999999999999987432 11000 01122222
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+...... + .+ ........+...++. .+|| +|++|++.. ..+
T Consensus 56 ~~~~~~~~-~--------~~-------------~~~~~~~~~~~~l~~------------~~~d-~i~~~~~~~---~~~ 97 (348)
T cd03820 56 DLGDKRDS-K--------LL-------------ARFKKLRRLRKLLKN------------NKPD-VVISFLTSL---LTF 97 (348)
T ss_pred eccccccc-c--------hh-------------ccccchHHHHHhhcc------------cCCC-EEEEcCchH---HHH
Confidence 22111000 0 00 000011122222222 2699 788876551 122
Q ss_pred HHHhccCCCCCCC-ceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 246 LKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 246 l~~~~~~~~~~~~-~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
+.... .+ +|++++.|+........ .......+..++.+|.++++|
T Consensus 98 ~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~s 143 (348)
T cd03820 98 LASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVLT 143 (348)
T ss_pred HHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEeC
Confidence 22211 23 49999999643211000 011113677788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..+.... ... ..++.+|+||++...+.+. ...+.+.
T Consensus 144 ~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~--------------------------------~~~~~~~ 180 (348)
T cd03820 144 EEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPS--------------------------------SDLKSKR 180 (348)
T ss_pred HHHHHHhh-----ccC------CCCeEEecCCcChhhcccc--------------------------------CCCCCcE
Confidence 99972222 111 2389999999997765432 0124578
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccEE
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
++|+|++.+.||++.++++++++.+ ++++|+|+|.+. ....++++...++ .++.+.+. .+.+..+++.||++
T Consensus 181 i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~ 256 (348)
T cd03820 181 ILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIF 256 (348)
T ss_pred EEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEE
Confidence 9999999999999999999999974 789999999987 3445555555443 34544443 45677899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCc-ccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 559 (611)
++||.+|++|++++|||+||+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~~ 324 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELRK 324 (348)
T ss_pred EeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 99999999999999999999999999965 566777777799987 999999999999999998 77777
Q ss_pred HHHHHH--HHhhCCchHHHHHHH
Q 007247 560 EMMKNG--MAQDLSWKGPAKKWE 580 (611)
Q Consensus 560 ~~~~~~--~~~~fsw~~~a~~~~ 580 (611)
++++++ +.++|+|+.++++|.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 325 RMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHHhCHHHHHHHhc
Confidence 777776 468999999999986
No 58
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=2.5e-30 Score=269.83 Aligned_cols=352 Identities=20% Similarity=0.215 Sum_probs=243.7
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++|+.. .||...++..|+++|.+.||+|+++++...... .....|+..+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999875 488999999999999999999999997632211 0112244444
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+...... ......+ .....+.++++. .+|| +||+|.+........
T Consensus 52 ~~~~~~~~--------------------~~~~~~~-~~~~~~~~~~~~------------~~~d-vv~~~~~~~~~~~~~ 97 (359)
T cd03808 52 PIPLDRRG--------------------INPFKDL-KALLRLYRLLRK------------ERPD-IVHTHTPKPGILGRL 97 (359)
T ss_pred eccccccc--------------------cChHhHH-HHHHHHHHHHHh------------cCCC-EEEEccccchhHHHH
Confidence 33211100 0000011 111222222222 2699 899997666665555
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
..... ...++++++|+..+...... + .........+..+..+|.++++|+
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~d~ii~~s~ 147 (359)
T cd03808 98 AARLA------GVPKVIYTVHGLGFVFTSGG-----------L-------------KRRLYLLLERLALRFTDKVIFQNE 147 (359)
T ss_pred HHHHc------CCCCEEEEecCcchhhccch-----------h-------------HHHHHHHHHHHHHhhccEEEEcCH
Confidence 55422 46788888886543111000 0 000112334666778999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+.+ ++... ....+.+++||+|...+.+.... ...+.+.|
T Consensus 148 ~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~i 191 (359)
T cd03808 148 DDRDLALK---LGIIK----KKKTVLIPGSGVDLDRFSPSPEP-----------------------------IPEDDPVF 191 (359)
T ss_pred HHHHHHHH---hcCCC----cCceEEecCCCCChhhcCccccc-----------------------------cCCCCcEE
Confidence 99999886 22211 02267778899998776554210 11356799
Q ss_pred EEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHH-HCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+|+|++.+.||++.++++++.+.+ ++++|+|+|.+..........+.. ....++.+.+. .+.+..+++.||++++
T Consensus 192 ~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ 269 (359)
T cd03808 192 LFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVL 269 (359)
T ss_pred EEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEe
Confidence 999999999999999999999974 689999999987432222111111 22345666655 3446689999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~ 562 (611)
||..|++|++++|||+||+|||+++.++..|++.++.+|+++ +++|+++++++|..++.+ ++.+.+++
T Consensus 270 ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~ 337 (359)
T cd03808 270 PSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARMG 337 (359)
T ss_pred cCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHHH
Confidence 999999999999999999999999999999999999999987 899999999999999988 66666666
Q ss_pred HHH---HHhhCCchHHHHHHH
Q 007247 563 KNG---MAQDLSWKGPAKKWE 580 (611)
Q Consensus 563 ~~~---~~~~fsw~~~a~~~~ 580 (611)
+++ +.++|||+.++++|+
T Consensus 338 ~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 338 QAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHhcCHHHHHHHhh
Confidence 665 468999999999886
No 59
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=100.00 E-value=2.4e-32 Score=273.46 Aligned_cols=234 Identities=40% Similarity=0.679 Sum_probs=175.1
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCC-ceEEE--------EEeCCeeeEEEEEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIE--------LKVGDKIEKVRFFH 156 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~ 156 (611)
||++|++|++|+.++||+++++..|+++|+++||+|.|++|.|+...+.... ....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 7999999999999999999999999999999999999999999776665421 11112 22222 25678888
Q ss_pred eeecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecC
Q 007247 157 CHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236 (611)
Q Consensus 157 ~~~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd 236 (611)
...+|+++++++++.++.+ ..+|++. +.+|.++..||.+|+++++++++.+.+ +|| |||+||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~hD 141 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCHD 141 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEEC
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEecC
Confidence 8889999999999998876 5699877 778999999999999999999998765 599 999999
Q ss_pred CccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhh
Q 007247 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILE 316 (611)
Q Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 316 (611)
|+++++|.+++..++..+.+.++|+++|+||+.+||.++...+..+++|...+..... ......+++++.++..
T Consensus 142 W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~------~~~~~~in~lk~gi~~ 215 (245)
T PF08323_consen 142 WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDE------YEFYGQINFLKAGIVY 215 (245)
T ss_dssp GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTT------TEETTEEEHHHHHHHH
T ss_pred chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccc------cccccccCHHHHHHHh
Confidence 9999999999998877777789999999999999999998888888888754322111 1123578999999999
Q ss_pred ccEEEecCHHHHHHHHcCcCCCcccchhh
Q 007247 317 SDMVLTVSPHYAQELVSGEDKGVELDNII 345 (611)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~ 345 (611)
||.|+|||+.+++++.+ ..+|..++.++
T Consensus 216 AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l 243 (245)
T PF08323_consen 216 ADKVTTVSPTYAREIQT-PEFGEGLEGLL 243 (245)
T ss_dssp SSEEEESSHHHHHHTTS-HHHHTT-HHHH
T ss_pred cCEeeeCCHHHHHHHhC-cccCCChHHHh
Confidence 99999999999999986 33444555444
No 60
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.97 E-value=2.5e-29 Score=270.60 Aligned_cols=447 Identities=17% Similarity=0.202 Sum_probs=265.2
Q ss_pred EeeeecCccccccHHHHhccchHHHHh-CCCeEEEEeecCCccc-ccCCC-ceE---EEE---EeCCeeeEEEEEEeeec
Q 007247 90 VGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYDQYK-DAWDT-DVV---IEL---KVGDKIEKVRFFHCHKR 160 (611)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~~~~~-~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~ 160 (611)
+++|... +.||+=+++..=|+.+++ .|-+..++.|...+.. ...+. ... +.. ......-.+++-+..+.
T Consensus 7 ~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 4455433 789999999998888765 5889999988754211 11100 000 000 00111234556666677
Q ss_pred CceEEE-EeCccch-------hhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhh-HHhccCCCCCCCCCCCCCeE
Q 007247 161 GVDRVF-VDHPWFL-------AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAP-RILNLNSNKYFSGPYGEDVV 231 (611)
Q Consensus 161 gv~~~~-i~~~~~~-------~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~Dvi 231 (611)
|-+++. +|...++ ...|...+ +-++..+.||.+-. -|.+.+...++.+ +.+.. -++| |
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~lW~~~~--i~s~~~~~d~nea~-~fgy~~~~~i~~~~~~~~~---------~~~d-V 151 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGELWELCG--IGSPEGDRETNDAI-IFGFLVAWFLGEFAEQFDD---------EPAV-V 151 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHHHHHHcC--CCCCCCCCcchHHH-HHHHHHHHHHHHHHhhccC---------CCCe-E
Confidence 877664 4543333 34664443 44445555565443 3444444444322 22111 2589 9
Q ss_pred EEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCcccccc-CcccccccCCCcccccccccccCCC---CCCCCcch
Q 007247 232 FVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYN---KPVRGRKI 307 (611)
Q Consensus 232 vh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 307 (611)
+|+|||+++.....++... .++|.|+|+|.... ||. ..+ . ..+...+...++.. +.....+.
T Consensus 152 iH~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g------~-~~~y~~l~~~~~d~eA~~~~I~~r~ 217 (590)
T cd03793 152 AHFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAG------N-VDFYNNLDYFDVDKEAGKRGIYHRY 217 (590)
T ss_pred EEEcchhHhHHHHHHHHhC------CCCCEEEEeccccc-ccccccC------C-cccchhhhhcchhhhhhcccchHHH
Confidence 9999999999999999633 58999999997665 553 111 0 11111111111110 00011233
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchh-hhccHH-
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAKPL- 385 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~-~~~~~~- 385 (611)
..++.+...||.+++||+.++.++.. .++.+++ + +||||+|+..|.+..+. ..+ ..+|..
T Consensus 218 ~iE~~aa~~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~ki 279 (590)
T cd03793 218 CIERAAAHCAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKEKI 279 (590)
T ss_pred HHHHHHHhhCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhhhh
Confidence 46778889999999999999999986 3666655 3 89999999998765321 000 011111
Q ss_pred ---HHHHHHHHhCCCCCCCCcEEEE-EcCccc-ccCHHHHHHHHHhccc------CC---cEEEEEeCCC----------
Q 007247 386 ---LKEALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------EN---VQIIVLGTGK---------- 441 (611)
Q Consensus 386 ---~~~~~~~~~gl~~~~~~~~il~-iGrl~~-~Kg~d~li~a~~~l~~------~~---~~lvivG~g~---------- 441 (611)
....++..++++ +++++++| +||++. +||+|.+|+|+++|.. .+ +-|+|+=.+.
T Consensus 280 ~~f~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g 357 (590)
T cd03793 280 NEFVRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKG 357 (590)
T ss_pred hHHHHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcc
Confidence 122345556654 34567777 799998 9999999999999865 12 2244433321
Q ss_pred ----chhHHHHHHHHH----------------------------------------------------------------
Q 007247 442 ----KPMEKQLEQLEI---------------------------------------------------------------- 453 (611)
Q Consensus 442 ----~~~~~~l~~l~~---------------------------------------------------------------- 453 (611)
+.+.+.++++..
T Consensus 358 ~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~ 437 (590)
T cd03793 358 QAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRR 437 (590)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHH
Confidence 011111111100
Q ss_pred ---HC--C--CceEEecccC-------hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccc----ccce
Q 007247 454 ---LY--P--EKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTV 515 (611)
Q Consensus 454 ---~~--~--~~v~~~~~~~-------~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v 515 (611)
-. . .++.++..|- +....+++++||++++||.+||||++++|||+||+|+|+|+.+|+ .|++
T Consensus 438 ~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 438 IQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred hcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 00 0 1333333331 122447999999999999999999999999999999999999998 4555
Q ss_pred ecC-cceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHH-HHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 516 EEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 516 ~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~-~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
.++ ..|+.+-+... .--+.++++++++|.++++....+.....+. ...++.|+|++.++.|.+.|+.++.
T Consensus 518 ~~~~~~gi~V~~r~~---~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 518 EDPESYGIYIVDRRF---KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred ccCCCceEEEecCCc---cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 444 35666511000 0014668889999998885411122222211 1346889999999999999998764
No 61
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.97 E-value=4.7e-30 Score=276.37 Aligned_cols=222 Identities=15% Similarity=0.131 Sum_probs=169.1
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..++.+|.++++|+..++.+.+. .+.. ..++.+||||+|.+.|.+....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~------~~~v~vipngvd~~~f~~~~~~------------------- 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEA------AGRITAFPNGVDADFFSPDRDY------------------- 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCC------CCCeEEeecccchhhcCCCccc-------------------
Confidence 345677889999999999999998752 1222 2278999999999888764321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHH----HHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEE
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA----AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li----~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 461 (611)
.... ..+.++|+|+|++.+.||++.++ ++++.+.+ ++++|+|+|+|+. +.++++... .++.+
T Consensus 217 -----~~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 217 -----PNPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred -----cCCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 0001 12457899999999999999988 45555543 7899999999873 345555433 34776
Q ss_pred ecccChHHHHHHHHHccEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHH
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
.+..+ + +..+++.||++++||+. ||+|++++|||+||+|||+|+.++. .+..++++|+++ + +|++
T Consensus 285 ~G~v~-~-~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA-D-VRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC-C-HHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe----------C-CCHH
Confidence 66555 3 55799999999999985 9999999999999999999997542 333345678875 5 8999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007247 541 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 541 ~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (611)
+++++|.+++++ ++.+.+|++++ +.++|||+..+++++++|+
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999987 66667777666 3589999999999999885
No 62
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=4.2e-29 Score=270.93 Aligned_cols=208 Identities=16% Similarity=0.120 Sum_probs=158.7
Q ss_pred ccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCC
Q 007247 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 396 (611)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 396 (611)
||.|+++|....+ +.. . .+. ..||||.+.|.|... ...++++|+
T Consensus 499 cD~VIaPS~atq~-L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQD-LPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHHH-hcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 8999999977763 321 0 222 227999999988642 122245666
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH
Q 007247 397 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (611)
Q Consensus 397 ~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 474 (611)
+..+ +.++|+||+.++||++.|++|++.+.+ ++++|+|+|+|+ ..+.++++..+++.++.+.+.. +....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGR--DHADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCC--CCHHHHH
Confidence 5332 458999999999999999999998865 589999999998 5667777777665445544432 2234699
Q ss_pred HHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcC
Q 007247 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 554 (611)
+.+|+||+||.+|+||++++||||||+|||+++.+|. +++.++.+|++ .+|.++++++|.+++++
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd-- 681 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALAN-- 681 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhC--
Confidence 9999999999999999999999999999999999985 45777888885 38999999999999997
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 555 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
++....+.. ...|||+.+++++++.-+
T Consensus 682 ~~~rl~~~a---~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 682 EPQPLTPEQ---RYNLSWEAATQRFMEYSD 708 (794)
T ss_pred chhhhHHHH---HhhCCHHHHHHHHHHhhc
Confidence 332222222 458999999999988654
No 63
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=3.3e-28 Score=252.86 Aligned_cols=334 Identities=22% Similarity=0.252 Sum_probs=224.3
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
||++++..+. .||.+.++..|+++|.+.||+|.+++............. ... .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~------------~~~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPS------------NVK-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccccc------------chh-------hhcee
Confidence 6899998642 599999999999999999999999997643222110000 000 00000
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCC-ccchHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIPC 244 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~-~~~~~~~ 244 (611)
..... . + ..........++++.. ++| +||+|.. .+.++..
T Consensus 58 ~~~~~---~----------~-------------~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 98 (353)
T cd03811 58 VLKLK---S----------L-------------RDLLAILRLRRLLRKE------------KPD-VVISHLTTTPNVLAL 98 (353)
T ss_pred eeecc---c----------c-------------cchhHHHHHHHHHHhc------------CCC-EEEEcCccchhHHHH
Confidence 00000 0 0 0001122233333332 599 8888876 3333332
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
+... .++|+++++|+......... . ......+..+..+|.++++|
T Consensus 99 ~~~~--------~~~~~i~~~~~~~~~~~~~~-----------~----------------~~~~~~~~~~~~~d~ii~~s 143 (353)
T cd03811 99 LAAR--------LGTKLIVWEHNSLSLELKRK-----------L----------------RLLLLIRKLYRRADKIVAVS 143 (353)
T ss_pred HHhh--------cCCceEEEEcCcchhhhccc-----------h----------------hHHHHHHhhccccceEEEec
Confidence 2221 26899999997544211000 0 00024566788999999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..++.+.+. ++.+ ..++.+|+||+|...+.+...+ .. ..+. ..+.++
T Consensus 144 ~~~~~~~~~~--~~~~------~~~~~vi~~~~~~~~~~~~~~~-------------------~~---~~~~--~~~~~~ 191 (353)
T cd03811 144 EGVKEDLLKL--LGIP------PDKIEVIYNPIDIEEIRALAEE-------------------PL---ELGI--PPDGPV 191 (353)
T ss_pred cchhhhHHHh--hcCC------ccccEEecCCcChhhcCcccch-------------------hh---hcCC--CCCceE
Confidence 9999998862 2221 2389999999998877654321 00 1222 235689
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEecccChHHHHHHHHHccEE
Q 007247 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
|+++||+.+.||++.++++++++.+ ++++|+|+|.++ ....++++...+ .+++.+.+..+ .+..+++.||++
T Consensus 192 i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~~d~~ 267 (353)
T cd03811 192 ILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQS--NPYPYLKAADLF 267 (353)
T ss_pred EEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEecccC--CHHHHHHhCCEE
Confidence 9999999999999999999999976 589999999887 334444444443 24566655432 355799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHH---HHHHHHHHhcCHHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYGTQA 557 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la---~~i~~ll~~~~~~~ 557 (611)
++||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ +++|.++++ +.+..++++ ++.
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~~ 335 (353)
T cd03811 268 VLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PEL 335 (353)
T ss_pred EeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hHH
Confidence 99999999999999999999999999999999999999999987 899999994 455555444 455
Q ss_pred HHHHHHH
Q 007247 558 LAEMMKN 564 (611)
Q Consensus 558 ~~~~~~~ 564 (611)
+.+++.+
T Consensus 336 ~~~~~~~ 342 (353)
T cd03811 336 RERLAAA 342 (353)
T ss_pred HHHHHHH
Confidence 5556553
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=8.6e-29 Score=261.73 Aligned_cols=205 Identities=20% Similarity=0.247 Sum_probs=169.8
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
+.+..++.+|.++++|+..++.+.+. ++ .+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~--~~---------~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKY--YG---------RDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHH--hC---------CCcEEECCCCCHhhcCcCC----------------------
Confidence 44566789999999999999998752 22 1467899999988776542
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChH
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (611)
...+.++|+||+.+.||++.+++|+.++. ++|+|+|+|+ ..+.+++ ...+++.+.+..+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCHH
Confidence 12357999999999999999999999883 8999999987 3444444 445679999988998
Q ss_pred HHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
.+..+++.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|.+
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHHH
Confidence 88899999999999999 99999999999999999999999999999999999987 99999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHhhCCchHHHHHH
Q 007247 549 ALATYGTQALAEMMKNGMAQDLSWKGPAKKW 579 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~ 579 (611)
+++++. ....++.++ .++|+|+...+++
T Consensus 323 l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 999842 233334333 3679999998875
No 65
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.97 E-value=2e-28 Score=268.72 Aligned_cols=218 Identities=17% Similarity=0.127 Sum_probs=172.8
Q ss_pred HhhhccEEEecCHHHHHHHHcCc-CCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~-~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (611)
....+|.++++|+..++.+.+.. .++.. ..++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~------~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNI------EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCC------CCcEEEEcCCCcccccCccc-------------------------
Confidence 35578999999999888876421 12211 23789999998654333211
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccCh
Q 007247 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 467 (611)
Q Consensus 392 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~ 467 (611)
.++...|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+. .
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G~-~- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKGH-R- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcCC-C-
Confidence 1234689999999999999999999999875 799999999997 4567777776653 45666653 2
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc-ccccceecCcceEEecccccccccCCc----cC----
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDP----VD---- 538 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~----~d---- 538 (611)
.+..+++.||++++||..|+||++++|||+||+|||+++.+ |.+|+|.+|.+|+++ ++ +|
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv----------~~~~~~~d~~~~ 453 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLI----------PIDEEEDDEDQI 453 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEE----------eCCccccchhHH
Confidence 24579999999999999999999999999999999999986 899999999999997 42 23
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l 586 (611)
++++|++|.++++ ++.+.+|++++. +++|||+.++++|+++++++
T Consensus 454 ~~~la~~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 454 ITALAEKIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 8999999999994 345677777774 68999999999999999764
No 66
>PHA01633 putative glycosyl transferase group 1
Probab=99.96 E-value=1.7e-27 Score=246.47 Aligned_cols=225 Identities=16% Similarity=0.225 Sum_probs=170.0
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
++..+.+.+.+.++++|+..++.+.+ .|++. .+ .|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 45566677788999999999999986 45542 23 47899999988765321 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCCchhHHHHHHHHHHCCCceEE
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 461 (611)
..++++++.... +.++|+++||+.++||++.|++|++++.+ + +++++++|.+ .++++ ..++++.+
T Consensus 135 ~~~r~~~~~~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l--~l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDFP-DTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQL--EVPANVHF 205 (335)
T ss_pred HHHHHHhCcCCC-CCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHc--CCCCcEEE
Confidence 345556654322 45789999999999999999999999865 3 4688888742 23332 24556777
Q ss_pred eccc---ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec------------------Ccc
Q 007247 462 VAKF---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------------------GFT 520 (611)
Q Consensus 462 ~~~~---~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------------------g~~ 520 (611)
.+.+ +.+.+..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.+ .++
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 6432 4667788999999999999999999999999999999999999999997552 234
Q ss_pred eEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHH
Q 007247 521 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 581 (611)
Q Consensus 521 G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 581 (611)
||++ +..|+++++++|.++++..+++.+ .+.....+++|+|+.+.++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 5654 889999999999999776434333 2333346799999999999974
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=3.5e-28 Score=254.00 Aligned_cols=231 Identities=14% Similarity=0.153 Sum_probs=171.4
Q ss_pred hHhHHH-hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 308 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 308 ~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
.++... ...+|.++++|+..++.+.+ .|.+. +.++.+||||+|.+.|.+....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 345555 57899999999999999875 34321 1278999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
..+.+++++.|++.++||++.|++|++++.+ ++++++|+|++..+ ..+. ...+ + .+.
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~~-~--~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLNG-V--KTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----cccc-e--ecc
Confidence 1134577788899999999999999999976 68999999976521 1111 1111 1 233
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEeccc-cc--------ccccCC
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF-SV--------DCEAVD 535 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~-~~--------~~~~v~ 535 (611)
.+.+.+..+|+.||++++||++|+||++++|||+||+|||+|+.||+.|++.++.+|+++..- .+ .|=++-
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 456778889999999999999999999999999999999999999999999999999886210 00 001112
Q ss_pred ccCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHH
Q 007247 536 PVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 536 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~ 585 (611)
+.|.+++++++.+++.+.+++.+.++..++ ..++|||+.++++|+++|++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 347788999999999874334444433332 47999999999999999975
No 68
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=2.2e-27 Score=256.15 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=179.5
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+.+..+..+|.++++|+..++.+.+. ++...+ ++.+++||++...+.+..
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC---------------------
Confidence 344556789999999999999998752 444333 889999999876553321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C--CcEEEEEeCCCchhHHHHHHHHHHCC--CceEE
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 461 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~ 461 (611)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.++++....+ +++.+
T Consensus 226 ----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f 293 (407)
T cd04946 226 ----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNF 293 (407)
T ss_pred ----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEE
Confidence 11245789999999999999999999999976 2 57788899987 4566666665443 45778
Q ss_pred ecccChHHHHHHHHH--ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCc-cC
Q 007247 462 VAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VD 538 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~--aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~-~d 538 (611)
.+..+.+.+..+++. +|++++||..|++|++++|||+||+|||+|+.||..|++.++.+|+++ ++ +|
T Consensus 294 ~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~ 363 (407)
T cd04946 294 TGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPT 363 (407)
T ss_pred ecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCC
Confidence 888888777788875 789999999999999999999999999999999999999999999987 55 58
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 580 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~ 580 (611)
+++++++|.+++++ ++.+.+|++++ +.++|||+...+++.
T Consensus 364 ~~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999997 67777777766 469999999998875
No 69
>PLN02275 transferase, transferring glycosyl groups
Probab=99.96 E-value=7.7e-27 Score=248.99 Aligned_cols=245 Identities=15% Similarity=0.103 Sum_probs=173.2
Q ss_pred CCCeEEEecCCccc---hHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCC
Q 007247 227 GEDVVFVANDWHTS---LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 303 (611)
Q Consensus 227 ~~Dvivh~hd~~~~---~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (611)
+|| +||+|..... +.+..+.+. .++|+++++|+..+. .+. .+... .....
T Consensus 100 ~~D-vV~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~~------~~~~~------------~~~~~ 152 (371)
T PLN02275 100 RPD-VFLVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LLA------LSLGR------------SHPLV 152 (371)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HHh------cccCC------------CCHHH
Confidence 699 8999864432 223333333 478999999975321 000 00000 00000
Q ss_pred CcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhcc
Q 007247 304 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (611)
Q Consensus 304 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (611)
.....+++..++.+|.++++|+.+.+.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~--------------- 205 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE--------------- 205 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch---------------
Confidence 1122334666788999999999999998751 232 268899984 4556554210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc-------------------cCCcEEEEEeCCCchh
Q 007247 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKPM 444 (611)
Q Consensus 384 ~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~-------------------~~~~~lvivG~g~~~~ 444 (611)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ .
T Consensus 206 --------~--~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~ 272 (371)
T PLN02275 206 --------I--RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--Q 272 (371)
T ss_pred --------h--cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--C
Confidence 0 0111 13357889999999999999999998872 2689999999998 4
Q ss_pred HHHHHHHHHHCC-CceEEecc-cChHHHHHHHHHccEEEeCC--C-CCCCcHHHHHHHHcCCceEEcCCcccccceecCc
Q 007247 445 EKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPS--R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF 519 (611)
Q Consensus 445 ~~~l~~l~~~~~-~~v~~~~~-~~~~~~~~i~~~aDv~l~pS--~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~ 519 (611)
.+.++++..+++ .++.+.+. .+.+.+..+|+.||++++|+ . .|++|++++|||+||+|||+++.||..|+|.++.
T Consensus 273 ~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~ 352 (371)
T PLN02275 273 KAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGK 352 (371)
T ss_pred HHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCC
Confidence 566777766554 34666664 56788889999999999864 2 3899999999999999999999999999999999
Q ss_pred ceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 520 TGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 520 ~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
+|+++ + |+++++++|.+++
T Consensus 353 ~G~lv----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 353 NGLLF----------S--SSSELADQLLELL 371 (371)
T ss_pred CeEEE----------C--CHHHHHHHHHHhC
Confidence 99987 4 6999999998864
No 70
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.95 E-value=3.9e-26 Score=243.31 Aligned_cols=215 Identities=20% Similarity=0.217 Sum_probs=173.4
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 389 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (611)
+...+..+|.++++|+..++.+... ++.. .++.+||||++...+.+...
T Consensus 151 ~~~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 151 VFENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred HHhChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch----------------------
Confidence 3344678999999999999988752 2211 14889999999876654310
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC--CCceEEeccc
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKF 465 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~ 465 (611)
.....+.++++||+.+.||++.+++++.++.+ ++++|+|+|.|.. ...++++.... ++++.+.+ +
T Consensus 200 --------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~g-~ 268 (372)
T cd04949 200 --------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE--EEKLKELIEELGLEDYVFLKG-Y 268 (372)
T ss_pred --------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch--HHHHHHHHHHcCCcceEEEcC-C
Confidence 01244689999999999999999999999975 7899999999873 44455554443 34555554 4
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc-ccccceecCcceEEecccccccccCCccCHHHHHH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 544 (611)
. +.+..+++.||++++||..|+||++++|||++|+|||+++.+ |..+++.++.+|+++ +++|++++++
T Consensus 269 ~-~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~ 337 (372)
T cd04949 269 T-RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAE 337 (372)
T ss_pred C-CCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHH
Confidence 3 346679999999999999999999999999999999999987 899999999999987 8999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHH
Q 007247 545 TVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 579 (611)
Q Consensus 545 ~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~ 579 (611)
+|..++++ ++.+.++++++. .++|||+.++++|
T Consensus 338 ~i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999998 777888887775 5899999999876
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=1.6e-25 Score=244.64 Aligned_cols=291 Identities=16% Similarity=0.190 Sum_probs=203.1
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
.| +|++||+|..++|.+++... +++|++|.+|... |... .+..+ | ..
T Consensus 132 ~d-~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hipf-----P~~e---------~~~~l--------p----~~ 178 (460)
T cd03788 132 GD-LVWVHDYHLLLLPQMLRERG------PDARIGFFLHIPF-----PSSE---------IFRCL--------P----WR 178 (460)
T ss_pred CC-EEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCCC-----CChH---------HHhhC--------C----Ch
Confidence 57 99999999999999998764 6889999999432 2111 11000 0 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccch--------hhhccceeEeeCCcccCCcCCCCccccccccCcchh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN--------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~--------~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (611)
..+-.++..+|.|.+.+..+...+.+....-..++. .-+..++.+||||+|++.|.+...
T Consensus 179 ~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~------------ 246 (460)
T cd03788 179 EELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAA------------ 246 (460)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhc------------
Confidence 233456778999999998877665542211111100 011247899999999988865421
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeCCC-------chhHH
Q 007247 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPMEK 446 (611)
Q Consensus 380 ~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~----~~lvivG~g~-------~~~~~ 446 (611)
.+..+..+++..+.. ++.++|+++||+++.||++.+++|++++.+ ++ ++|+++|.+. ..+.+
T Consensus 247 ---~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~ 321 (460)
T cd03788 247 ---SPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRR 321 (460)
T ss_pred ---CchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHH
Confidence 111122233333333 256899999999999999999999999865 33 6788887542 13455
Q ss_pred HHHHHHHHC----C----CceEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCccccc
Q 007247 447 QLEQLEILY----P----EKARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVD 513 (611)
Q Consensus 447 ~l~~l~~~~----~----~~v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e 513 (611)
+++++..+. + ..+.++. ..+.+.+..+|+.||++++||..|+||++++|||+||+| +|+|+.+|..+
T Consensus 322 ~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~ 401 (460)
T cd03788 322 EVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE 401 (460)
T ss_pred HHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchh
Confidence 555554331 1 1244443 447788889999999999999999999999999999999 99999888887
Q ss_pred ceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHH
Q 007247 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEET 582 (611)
Q Consensus 514 ~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 582 (611)
. +.+|+++ +|.|+++++++|.++++++ ++.+..+.+++ ...+|||+..+++++.-
T Consensus 402 ~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 402 E---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred h---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 7 4678887 9999999999999999973 34444454443 24789999999988754
No 72
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=6.4e-25 Score=238.22 Aligned_cols=292 Identities=17% Similarity=0.209 Sum_probs=204.2
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|.+||+|..++|.+++... ++.++.|..|-. ||..+ .+..+ | ..
T Consensus 128 ~d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHip-----fP~~e---------~f~~l--------p----~r 174 (456)
T TIGR02400 128 GD-IVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIP-----FPSSE---------IYRTL--------P----WR 174 (456)
T ss_pred CC-EEEEecchhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChH---------HHhhC--------C----cH
Confidence 36 99999999999999999875 688999999932 33211 11100 0 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccch-----hhhccceeEeeCCcccCCcCCCCccccccccCcchhh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 380 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~ 380 (611)
..+-.++..+|.|-+.+..+++.+.+... .|.+... .-+..++.++|||+|++.|.+....
T Consensus 175 ~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~------------ 242 (456)
T TIGR02400 175 RELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK------------ 242 (456)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC------------
Confidence 34556788999999999999988775322 1221110 0134578999999999988654211
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeC-----CC--chhHHH
Q 007247 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPMEKQ 447 (611)
Q Consensus 381 ~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~-----g~--~~~~~~ 447 (611)
.........++++++ ++++|+++||+++.||++.+++|++++.+ + ++.|+++|. ++ ..++++
T Consensus 243 ~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~ 317 (456)
T TIGR02400 243 PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQ 317 (456)
T ss_pred hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHH
Confidence 000111224555553 55799999999999999999999999865 3 366887753 22 124445
Q ss_pred HHHHHHH----CCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCcccccc
Q 007247 448 LEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDT 514 (611)
Q Consensus 448 l~~l~~~----~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~ 514 (611)
++++... +.. .+.++ ..++.+.+..+|+.||++++||..||||++++|||+||+| +|+|+.+|..+.
T Consensus 318 i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~ 397 (456)
T TIGR02400 318 VEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE 397 (456)
T ss_pred HHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH
Confidence 5555321 110 12222 2446778889999999999999999999999999999999 999999898888
Q ss_pred eecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007247 515 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 515 v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (611)
+. +|+++ +|.|++++|++|.++++++ ++.+.++.+.. ....||+...++++++-+
T Consensus 398 l~---~gllV----------nP~d~~~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 398 LN---GALLV----------NPYDIDGMADAIARALTMP-LEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred hC---CcEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 74 68876 9999999999999999974 23333333222 246699999999887654
No 73
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.93 E-value=7.2e-24 Score=224.91 Aligned_cols=342 Identities=16% Similarity=0.054 Sum_probs=223.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++++.. .||...+...|+++|.++||+|.+++........ .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 899999864 4888888899999999999999999875311000 001136666
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.++.+..... . ..........+...+..+.+.+.. ++|| |||+|.+...+.+.
T Consensus 54 ~~~~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~~~~~ik~---------~~pD-vv~~~~~~~~~~~~ 107 (357)
T PRK00726 54 HFIPSGGLRRK-------G---------SLANLKAPFKLLKGVLQARKILKR---------FKPD-VVVGFGGYVSGPGG 107 (357)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEECCCcchhHHH
Confidence 66643321110 0 011111222233333333333322 2699 99999877766555
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+.+. .++|++++.|+..+ . ...+..+..+|.+++.+
T Consensus 108 ~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 108 LAARL-------LGIPLVIHEQNAVP----------------------------------G--LANKLLARFAKKVATAF 144 (357)
T ss_pred HHHHH-------cCCCEEEEcCCCCc----------------------------------c--HHHHHHHHHhchheECc
Confidence 54443 48899987763211 0 11233466899999998
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+..... .+ ..++.+|+||+|...+.+.. .+.+++++ ++.++
T Consensus 145 ~~~~~~--------~~------~~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~--~~~~~ 185 (357)
T PRK00726 145 PGAFPE--------FF------KPKAVVTGNPVREEILALAA-----------------------PPARLAGR--EGKPT 185 (357)
T ss_pred hhhhhc--------cC------CCCEEEECCCCChHhhcccc-----------------------hhhhccCC--CCCeE
Confidence 843211 12 23899999999987654321 11234443 24578
Q ss_pred EEEEcCcccccCHHHHH-HHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 405 IGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 405 il~iGrl~~~Kg~d~li-~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
|+++|+....|+...++ +|++++.+....++++|.|. .++..+.+ . .+.++.+. .|. +....+++.||+++.+
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~-g~~-~~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVV-PFI-DDMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEe-ehH-hhHHHHHHhCCEEEEC
Confidence 89999988888865555 99988865335577889887 34444444 3 44334443 333 4466899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcc--------cccceecCcceEEecccccccccCCccC--HHHHHHHHHHHHHhc
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 553 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~i~~ll~~~ 553 (611)
|- +++++|||++|+|+|++..++ ..+.+.+.++|+++ ++.| +++++++|.+++++
T Consensus 260 ~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~- 324 (357)
T PRK00726 260 AG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD- 324 (357)
T ss_pred CC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC-
Confidence 62 689999999999999987643 23567778899987 7777 99999999999998
Q ss_pred CHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 554 ~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
++.+.+|++++. .+.++-+.+++.|+++.+
T Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 -PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred -HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777788888774 467888888888877654
No 74
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.92 E-value=8.7e-23 Score=215.68 Aligned_cols=324 Identities=15% Similarity=0.071 Sum_probs=207.4
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEE
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (611)
+|++.+.+ .||-..++..|+++|.++||+|.+++.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 46666654 5888888899999999999999999876321111 0011355555
Q ss_pred EEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHH
Q 007247 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (611)
Q Consensus 166 ~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~ 245 (611)
.+..+.+..+ . .......+..+.+...++.+.+.. .+|| +||+|.....+....
T Consensus 53 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~i~~---------~~pD-vI~~~~~~~~~~~~~ 106 (350)
T cd03785 53 TIPVGGLRRK-------G---------SLKKLKAPFKLLKGVLQARKILKK---------FKPD-VVVGFGGYVSGPVGL 106 (350)
T ss_pred EEEecCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEECCCCcchHHHH
Confidence 5543221110 0 011111111222333333333321 2699 888887655444444
Q ss_pred HHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCH
Q 007247 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (611)
Q Consensus 246 l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (611)
+.+. .++|++++.|+... . .+.+.....+|.++++|+
T Consensus 107 ~a~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 107 AAKL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVALSFP 143 (350)
T ss_pred HHHH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEEEcch
Confidence 4433 47888876653110 0 112334556999999999
Q ss_pred HHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEE
Q 007247 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
...+.+ .+.++.+|+||+|...+.+.. . +++++++. +.+++
T Consensus 144 ~~~~~~--------------~~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~~--~~~~i 184 (350)
T cd03785 144 ETAKYF--------------PKDKAVVTGNPVREEILALDR----------------------E-RARLGLRP--GKPTL 184 (350)
T ss_pred hhhhcC--------------CCCcEEEECCCCchHHhhhhh----------------------h-HHhcCCCC--CCeEE
Confidence 877641 122889999999976654321 1 55666653 45678
Q ss_pred EEEcCcccccCHHH-HHHHHHhcccCCcEE-EEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 406 GFIGRLEEQKGSDI-LAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 406 l~iGrl~~~Kg~d~-li~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
++.|+....|+.+. ++++++.+.++++++ +++|+|. . +.+++...++.+++.+.+.. +.+..+|+.||+++.+
T Consensus 185 ~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~-~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 185 LVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--L-EEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred EEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--H-HHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEEC
Confidence 88888777777654 568888887666764 4778773 3 44555544444567665544 4566899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcc--------cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHHHhc
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 553 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~ 553 (611)
|- +++++|||++|+|+|++..++ ..+.+.+.++|+++ +++ |+++++++|.+++++
T Consensus 260 sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 260 AG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHHhcC-
Confidence 62 689999999999999987654 24667777899987 666 899999999999986
Q ss_pred CHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGM 566 (611)
Q Consensus 554 ~~~~~~~~~~~~~ 566 (611)
++.+.+|++++.
T Consensus 325 -~~~~~~~~~~~~ 336 (350)
T cd03785 325 -PERLKAMAEAAR 336 (350)
T ss_pred -HHHHHHHHHHHH
Confidence 777788887764
No 75
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.92 E-value=1.2e-22 Score=214.54 Aligned_cols=322 Identities=14% Similarity=0.081 Sum_probs=201.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||+|++.+ .||-......|+++|.++||+|++++.......+ . ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~--~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------L--VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------c--cccCCCce
Confidence 689988865 3444445568999999999999999864221000 0 01135566
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
+.++...+... . .......+..+.....++.+.+.. .+|| +||+|.+...+.+.
T Consensus 53 ~~i~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~l~~~i~~---------~~pD-vVi~~~~~~~~~~~ 106 (348)
T TIGR01133 53 YFIPVGGLRRK-------G---------SFRLIKTPLKLLKAVFQARRILKK---------FKPD-AVIGFGGYVSGPAG 106 (348)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEEcCCcccHHHH
Confidence 55543221110 0 111111112223333333333332 2699 88988765555444
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
.+... .++|++++.|+..+ . ...+...+.+|.++++|
T Consensus 107 ~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~d~ii~~~ 143 (348)
T TIGR01133 107 LAAKL-------LGIPLFHHEQNAVP----------------------------------G--LTNKLLSRFAKKVLISF 143 (348)
T ss_pred HHHHH-------cCCCEEEECCCCCc----------------------------------c--HHHHHHHHHhCeeEECc
Confidence 44443 36788754332110 0 11233466899999999
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 404 (611)
+...+.+ +..+|+||+|...+.+... +++++++ ++.++
T Consensus 144 ~~~~~~~-----------------~~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~--~~~~~ 181 (348)
T TIGR01133 144 PGAKDHF-----------------EAVLVGNPVRQEIRSLPVP-----------------------RERFGLR--EGKPT 181 (348)
T ss_pred hhHhhcC-----------------CceEEcCCcCHHHhcccch-----------------------hhhcCCC--CCCeE
Confidence 9876543 2368999998765543210 2245665 35578
Q ss_pred EEEEcCcccccCHHH-HHHHHHhcccCCcEEEEE-eCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 405 IGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 405 il~iGrl~~~Kg~d~-li~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
|+++|+....|+... ++++++++.+++++++++ |++. . +.+++...+++ +...+.|....+..+|+.||+++.
T Consensus 182 i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v~ 256 (348)
T TIGR01133 182 ILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVIS 256 (348)
T ss_pred EEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEEE
Confidence 999998888888655 568888886656777544 4333 2 45666555544 222222333256689999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCcc-------cccceecCcceEEecccccccccCCccC--HHHHHHHHHHHHHhc
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 553 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~i~~ll~~~ 553 (611)
+| + |++++|||++|+|+|+++.++ ..+++.++++|+++ ++.| +++++++|.+++++
T Consensus 257 ~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~- 321 (348)
T TIGR01133 257 RA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD- 321 (348)
T ss_pred CC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC-
Confidence 65 2 789999999999999998654 23578888999986 7766 99999999999987
Q ss_pred CHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGM 566 (611)
Q Consensus 554 ~~~~~~~~~~~~~ 566 (611)
++.+.+|++++.
T Consensus 322 -~~~~~~~~~~~~ 333 (348)
T TIGR01133 322 -PANLEAMAEAAR 333 (348)
T ss_pred -HHHHHHHHHHHH
Confidence 777788877763
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=6.1e-22 Score=212.02 Aligned_cols=221 Identities=13% Similarity=0.085 Sum_probs=159.2
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
..++|.++++|+...+.+.+ +|++.+ ++.++.|.++.. |.+..+ ...++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 55899999999999999886 566544 677665555432 222111 3346778
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
+|++.+ ...++++.|++...|+++.+++++.+. ++++++++|++.....+.++++...+++++.+.+..+ .+.++
T Consensus 196 ~~l~~~-~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~--~~~~l 270 (380)
T PRK13609 196 YQLCPN-KKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVE--NIDEL 270 (380)
T ss_pred cCCCCC-CcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechh--hHHHH
Confidence 888743 233556678898899999999998754 6899988764443456777777666665677765442 35679
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-Ccccc----cceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
++.||+++. ++.|++++|||+||+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999874 466999999999999999986 55532 23333 34433 45799999999999
Q ss_pred HHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHH
Q 007247 549 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l 586 (611)
++++ ++.+.+|++++. ...++++.+++.+++++...
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9987 777888887764 46689999999998877643
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=3.2e-22 Score=229.88 Aligned_cols=298 Identities=17% Similarity=0.242 Sum_probs=205.8
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... +++++.|..|.. ||... .+..+ | ..
T Consensus 148 ~d-~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiP-----FPs~e---------~fr~l--------p----~r 194 (797)
T PLN03063 148 GD-VVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTP-----FPSSE---------IYKTL--------P----SR 194 (797)
T ss_pred CC-EEEEecchhhhHHHHHHHhC------CCCcEEEEecCC-----CCCHH---------HHhhC--------C----CH
Confidence 36 99999999999999999875 799999999943 33211 11100 0 01
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCccc--chhh---hccceeEeeCCcccCCcCCCCccccccccCcchhh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 380 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~ 380 (611)
..+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..++.+||||+|+..|.+....
T Consensus 195 ~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~------------ 262 (797)
T PLN03063 195 SELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL------------ 262 (797)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC------------
Confidence 23446788999999999999988775221 12111 0111 22478899999999887643210
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeCC-----C--chhHHH
Q 007247 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTG-----K--KPMEKQ 447 (611)
Q Consensus 381 ~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~----~~lvivG~g-----~--~~~~~~ 447 (611)
..-......+++.++ ++++|+++||+++.||++.+++|++++.+ ++ +.|++++.. + ..++++
T Consensus 263 ~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~ 337 (797)
T PLN03063 263 PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQ 337 (797)
T ss_pred hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHH
Confidence 000011223444433 45799999999999999999999999865 44 445544422 1 124445
Q ss_pred HHHHHHHCCCc--------eEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCcccccc
Q 007247 448 LEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDT 514 (611)
Q Consensus 448 l~~l~~~~~~~--------v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~ 514 (611)
++++......+ +.+.. .++.+.+..+|+.||++++||..||+|++.+|||+||+| +|+|..+|..+.
T Consensus 338 v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~ 417 (797)
T PLN03063 338 VHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS 417 (797)
T ss_pred HHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh
Confidence 55554221111 11121 346677888999999999999999999999999999999 999999999887
Q ss_pred eecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHH
Q 007247 515 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 515 v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+ +.+|+++ +|.|++++|++|.++|+.. ++++.+..+.. ....++|...++.+++.|+++..
T Consensus 418 l--~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 418 L--GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred h--cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 6 4468876 9999999999999999953 33333333322 35789999999999998887764
No 78
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=5e-21 Score=204.43 Aligned_cols=222 Identities=16% Similarity=0.160 Sum_probs=162.4
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..++.+|.|+++|+...+.+.. ++ .++.+|+||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~---------~~i~~i~ngvd~~~f~~~~~~~------------------ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN---------PNVVLVPNGVDYEHFAAARDPP------------------ 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC---------CCEEEcccccCHHHhhcccccC------------------
Confidence 56788899999999999999988775 33 1789999999998887643210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
...+.. ...+.++|+|+|++.+.++++.+.++++.. ++++|+|+|.++... ....+. ...++.+.+..+.
T Consensus 195 ~~~~~~----~~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADL----AALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHH----hcCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 000000 112558999999999988888777666543 789999999983211 111221 1246888888888
Q ss_pred HHHHHHHHHccEEEeCCCC-----CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHH
Q 007247 468 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 542 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 542 (611)
+.+..+++.+|++++|+.. +++|++++|||+||+|||+++.+.+.+ .+..+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEE-----------eCCCHHHH
Confidence 8899999999999999864 468999999999999999998655443 3333443 56799999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 543 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 543 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
+++|.+++.+..+....+ ..+ +.+++||+..++++++.+++
T Consensus 331 ~~ai~~~l~~~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999999877643333322 222 67899999999999976654
No 79
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.88 E-value=6.7e-22 Score=227.56 Aligned_cols=296 Identities=18% Similarity=0.231 Sum_probs=204.3
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... ++.++.|..|-..+... .+.. +| ..
T Consensus 134 ~d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~pfP~~~----~f~~--lp--------------------~~ 180 (726)
T PRK14501 134 GD-VVWVHDYQLMLLPAMLRERL------PDARIGFFLHIPFPSFE----VFRL--LP--------------------WR 180 (726)
T ss_pred CC-EEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCCCCChH----HHhh--CC--------------------Ch
Confidence 36 99999999999999999875 68999999994433211 0111 11 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccc--hh---hhccceeEeeCCcccCCcCCCCccccccccCcchhh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 380 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~---~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~ 380 (611)
..+-.++..+|.|-+.+..+++.+.+... .+.+.. .+ -+..++.++|||+|++.|.+....
T Consensus 181 ~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------ 248 (726)
T PRK14501 181 EEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------ 248 (726)
T ss_pred HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------
Confidence 23456788999999999998887665221 111100 00 022368999999999988654210
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCC----c---hhHHH
Q 007247 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PMEKQ 447 (611)
Q Consensus 381 ~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~----~---~~~~~ 447 (611)
..-....+.+++.. .++++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + ++++.
T Consensus 249 ~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~ 323 (726)
T PRK14501 249 PEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKRE 323 (726)
T ss_pred chHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHH
Confidence 00001122344442 255799999999999999999999999865 3 37899887431 1 34445
Q ss_pred HHHHHHHC----CC----ceE-EecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCccccc
Q 007247 448 LEQLEILY----PE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLVD 513 (611)
Q Consensus 448 l~~l~~~~----~~----~v~-~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~e 513 (611)
++++..+. .. .+. +...++.+.+..+|+.||++++||..||||++++|||+||+ ||++...|+..+
T Consensus 324 ~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~ 403 (726)
T PRK14501 324 IDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE 403 (726)
T ss_pred HHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH
Confidence 55554321 11 122 33455778888999999999999999999999999999954 666666788777
Q ss_pred ceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHH--HHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM--MKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 514 ~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~--~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
++ .|+++ +|.|++++|++|.+++.++..++...+ .++ ....|||+..++++++.|.++..
T Consensus 404 l~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~-~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 404 LA----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERMQAMQE-RLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred hC----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHh
Confidence 75 37876 999999999999999986423322222 222 24789999999999999998864
No 80
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.87 E-value=1.3e-20 Score=204.76 Aligned_cols=234 Identities=17% Similarity=0.131 Sum_probs=163.2
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..+..+|.|+++|+..++.+.+ +|++ +. +.+++|+ +.+.+.+.. .....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHH
Confidence 35566788899999999999999986 5543 22 6777874 222222111 01123
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCce-E----
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA-R---- 460 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v-~---- 460 (611)
..++++++ + +.+++++.|+. .|+.+.+++|++++.+ ++++|+|+|+|+.. .+.++++..+.+-.. .
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45666666 3 44688888874 6889999999999865 79999999998732 245666655543211 1
Q ss_pred ---------EecccChHHHHHHHHHccEEEe-CCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecC-cceEEecccc
Q 007247 461 ---------GVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 528 (611)
Q Consensus 461 ---------~~~~~~~~~~~~i~~~aDv~l~-pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G~l~~~~~ 528 (611)
.++. ....+..+|+.||++++ +|..|++|.+++|||+||+|||++.. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 1111 12456689999999655 67779999999999999999999864 6666665542 457765
Q ss_pred cccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 529 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 529 ~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
.++|+++++++|.+++++ ++.+.+|++++...--+.....+++.+++++.+.
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 789999999999999987 7777888877743111225778888888877654
No 81
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.87 E-value=4.8e-21 Score=181.30 Aligned_cols=164 Identities=27% Similarity=0.445 Sum_probs=138.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc---cCCcEEEEEeCCCchhHHHHHHHHHHC--CCceEE
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILY--PEKARG 461 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~---~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~ 461 (611)
++..+...+.+ .+.++|+|+||+.+.||++.+++++..+. .++++|+|+|++. +...+..+...+ ..++.+
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 44556666655 35689999999999999999999999996 4799999999766 555566655543 357888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHH
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 541 (611)
.+....+.+..+++.||++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 888787788899999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 542 VSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 542 la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
++++|.+++++ ++.+..|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999998 678888887764
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.87 E-value=4.5e-20 Score=197.76 Aligned_cols=216 Identities=16% Similarity=0.131 Sum_probs=156.8
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
...+|.++++|+..++.+.+ +|++.+ ++.+++++++.+.+.+... +.+++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 46899999999999999886 676654 8888888888765443221 5568889
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc------cCCcE-EEEEeCCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~------~~~~~-lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
+|++. +.++|+++|+....|++..+++++..+. .++.+ ++++|.+. ...+.++++.. ..++.+.+..+
T Consensus 200 ~gl~~--~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~~ 274 (382)
T PLN02605 200 LGMDE--DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFVT 274 (382)
T ss_pred cCCCC--CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEeccc
Confidence 99974 4589999999999999999999998753 35676 56777663 34455555422 23465554443
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC------cccccceecCcceEEecccccccccCCccCHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
.++++|+.||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|++
T Consensus 275 --~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 275 --NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred --cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 4668999999999865 48899999999999999983 444 34445566764 38999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHH
Q 007247 541 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 582 (611)
Q Consensus 541 ~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (611)
+++++|.+++.+ +++.+.+|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~-~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGD-KSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999986 2566777777764 2445556666555443
No 83
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.86 E-value=1.9e-20 Score=198.43 Aligned_cols=241 Identities=18% Similarity=0.181 Sum_probs=175.4
Q ss_pred HHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHH
Q 007247 312 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (611)
Q Consensus 312 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (611)
.....+|++++.|......+.. .-+.++ ...+.+.+.++|.+.+.+.-- +.+...+...+
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~---~~~~L~----~~d~~~~y~ei~~s~~~~~~~-------------~~~~~~~~~~r 264 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKA---TFVSLS----NSDITSTYPEIDGSWFTYGQY-------------ESHLELRLPVR 264 (495)
T ss_pred hhhhccceEecchhhhhhhhhh---hhhhcC----CCCcceeeccccchhcccccc-------------ccchhcccccc
Confidence 3556789999999999888775 122222 225888888998877654210 00111111222
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-------CCcEEEEEeCC--------CchhHHHHHHHHHHCC
Q 007247 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--------KKPMEKQLEQLEILYP 456 (611)
Q Consensus 392 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~-------~~~~lvivG~g--------~~~~~~~l~~l~~~~~ 456 (611)
...+.. .....+..+.++++.||++++++++.++.. .+.+++++|+. ...+.+.+.++..++.
T Consensus 265 ~~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~ 342 (495)
T KOG0853|consen 265 LYRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD 342 (495)
T ss_pred eeeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC
Confidence 222322 224678889999999999999999998865 25788888832 1246777778887764
Q ss_pred ---CceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEeccccccccc
Q 007247 457 ---EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 533 (611)
Q Consensus 457 ---~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~ 533 (611)
+.+.+....+......+++.+...+.....|+||++.+|||+||+|||+++.||..|+|.++.|||++
T Consensus 343 l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~--------- 413 (495)
T KOG0853|consen 343 LLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI--------- 413 (495)
T ss_pred ccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee---------
Confidence 33333344455444567788888777666699999999999999999999999999999999999987
Q ss_pred CCccCHH---HHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007247 534 VDPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 534 v~~~d~~---~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+| +.+ .+|+++..+..+ ++.+.+|++++ +.+.|||+.+.+++.++.....
T Consensus 414 -dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 414 -DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred -CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 77 555 699999999998 77788888777 4677999999999988887554
No 84
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.85 E-value=9.2e-20 Score=178.56 Aligned_cols=118 Identities=28% Similarity=0.443 Sum_probs=96.9
Q ss_pred EEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHHHHHHHccEEEeC
Q 007247 407 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 483 (611)
Q Consensus 407 ~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~~~aDv~l~p 483 (611)
|+|++.+.||++.+++++..+.+ ++++++++|.+.+...............++...+.+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987432222111222334567777776 455666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEe
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 524 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~ 524 (611)
|..|++|++++|||++|+|+|+|+.++..|++.++++|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999863
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.85 E-value=1.4e-19 Score=194.49 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=157.6
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
...+|.+++.|+..++.+.+ .|++.+ ++.++.|+++..+..+. + +...+++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~-~-------------------~~~~~~~ 195 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI-D-------------------QKQWLID 195 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc-c-------------------HHHHHHH
Confidence 45799999999999999885 566544 77777776664332211 1 3456778
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
+|++.+ ...++++.|++...||++.+++++.+. .+++++++++++.....+.+++.... .+++.+.+ |. +.++.+
T Consensus 196 ~~l~~~-~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~-~~~~~~ 270 (391)
T PRK13608 196 NNLDPD-KQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YT-KHMNEW 270 (391)
T ss_pred cCCCCC-CCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-cc-chHHHH
Confidence 888743 234566789999899999999986432 26789876654332333444433222 23465544 33 346689
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-Cccc----ccceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
|+.||+++. ++.|++++|||++|+|+|+++ .+|. ...+.+.+.|+. ..|.++++++|.+
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~ 334 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVAS 334 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHH
Confidence 999999996 456899999999999999996 3431 123335555653 4699999999999
Q ss_pred HHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007247 549 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 549 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
++++ ++.+.+|++++. ...++++.+++++++++..+..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 335 LTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 9987 778888888875 4679999999999998876654
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.84 E-value=2.5e-19 Score=193.74 Aligned_cols=290 Identities=16% Similarity=0.148 Sum_probs=204.0
Q ss_pred CeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh
Q 007247 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 308 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
| +|-.||+|..++|.+|+... +++++-|..|.. ||... .+..+ | ...
T Consensus 134 d-~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiP-----FPs~e---------ifr~L--------P----~r~ 180 (487)
T TIGR02398 134 A-TVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTP-----FPSAD---------VFNIL--------P----WRE 180 (487)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCeEEEEeeCC-----CCChH---------HHhhC--------C----chH
Confidence 6 99999999999999999875 689999999943 33221 11110 0 113
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccch-----------------------h---hhccceeEeeCCcccC
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----------------------I---IRKTGIKGIVNGMDVQ 360 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----------------------~---~~~~~i~vI~Ngvd~~ 360 (611)
.+-.++..+|.|-+.+..+++.+.+... .|.+... + -+..++.++|.|+|++
T Consensus 181 ~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~ 260 (487)
T TIGR02398 181 QIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPE 260 (487)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHH
Confidence 3456788999999999999987765321 1211100 0 1223588999999998
Q ss_pred CcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEE
Q 007247 361 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQI 434 (611)
Q Consensus 361 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~l 434 (611)
.|.+.... ..-....+.++++++ ++++|++++|++..||+...++|++++.+ | ++.|
T Consensus 261 ~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~L 323 (487)
T TIGR02398 261 RIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTL 323 (487)
T ss_pred HHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEE
Confidence 88543210 001122445777776 45799999999999999999999999865 4 5799
Q ss_pred EEEeCCC-------chhHHHHHHHHHHCCC--------c-eEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHH
Q 007247 435 IVLGTGK-------KPMEKQLEQLEILYPE--------K-ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 498 (611)
Q Consensus 435 vivG~g~-------~~~~~~l~~l~~~~~~--------~-v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma 498 (611)
+++|.+. .++.+++++++..... . +.+...++.+.+..+|+.||+++++|..||++++..|+|+
T Consensus 324 vqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva 403 (487)
T TIGR02398 324 VTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVA 403 (487)
T ss_pred EEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHh
Confidence 9999864 2355666666554211 1 2333445778888899999999999999999999999999
Q ss_pred cCC----ceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCch
Q 007247 499 YGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWK 573 (611)
Q Consensus 499 ~G~----PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~ 573 (611)
|+. |+|.|..+|..+.+. .++++ +|.|++++|++|.++|+.+..++..++.+.. ....++..
T Consensus 404 ~~~~~~GvLILSefaGaa~~l~---~AllV----------NP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~ 470 (487)
T TIGR02398 404 AQGLLDGVLVLSEFAGAAVELK---GALLT----------NPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQ 470 (487)
T ss_pred hhcCCCCCEEEeccccchhhcC---CCEEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHH
Confidence 998 999999999887763 36765 9999999999999999985444433332221 23556655
Q ss_pred HHHHHHHH
Q 007247 574 GPAKKWEE 581 (611)
Q Consensus 574 ~~a~~~~~ 581 (611)
.-++.+++
T Consensus 471 ~W~~~fl~ 478 (487)
T TIGR02398 471 RWADEFLA 478 (487)
T ss_pred HHHHHHHH
Confidence 55555443
No 87
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.78 E-value=4.8e-17 Score=174.05 Aligned_cols=218 Identities=17% Similarity=0.125 Sum_probs=144.7
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (611)
..+.+|.++++|+...+.+.. +|. ++.++.|.+.... .+.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~-~~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAI-PLLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhc-cccc-------------------ChHHHHH
Confidence 466889999999998887764 332 2334444432211 1100 1445677
Q ss_pred HhCCCCCCCCcEE-EEEc-Ccccc-cCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHC-CCceEEecccC
Q 007247 393 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 466 (611)
Q Consensus 393 ~~gl~~~~~~~~i-l~iG-rl~~~-Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~ 466 (611)
+++++.+ .+++ ++.| |..+. ++.+.++++++.+.+ ++++++++|.+. ...+.++++..++ +.++.. +.
T Consensus 179 ~l~~~~~--~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPD--ARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---Ec
Confidence 8888643 3554 4445 44444 457899999998865 589999998632 2455566655554 323322 22
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-----------------CCcccccceecCc--ceEEeccc
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 527 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~v~~g~--~G~l~~~~ 527 (611)
+.+..+|+.||+++.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++.
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 323 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQ--- 323 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcC---
Confidence 34567999999999987 88889999999999987 4566777777654 44543
Q ss_pred ccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHH
Q 007247 528 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 528 ~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+..|++++++.+.++++| ++.+.+|++++ ..+.. -...+++..+.+.+++
T Consensus 324 -------~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 324 -------EEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred -------CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 778999999999999998 77777777775 23333 3345666666665554
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=1.5e-16 Score=167.16 Aligned_cols=186 Identities=16% Similarity=0.092 Sum_probs=134.8
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
..+++..++.+|.++++|+.+++.+.+ +|++.+ ++.++++..+.....+.
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~--------------------- 163 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELV--------------------- 163 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEeccccccccccccc---------------------
Confidence 356788899999999999999999986 565433 56555554332111000
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
. ..+..+.|+|+|++....++ .+ ..++++|+|+|+|+... ...+++.+.+.++
T Consensus 164 -----~-----~~~~~~~i~yaG~l~k~~~l---~~-----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 164 -----K-----TPSFQKKINFAGNLEKSPFL---KN-----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----c-----cccCCceEEEecChhhchHH---Hh-----cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 0 01134689999999954321 11 23679999999997311 2345799999999
Q ss_pred hHHHHHHHHHccEEEeCCCC-----------CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCC
Q 007247 467 IPLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 535 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~-----------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 535 (611)
.+.+..+++. |+.+++... -++|.++.|+|+||+|||+++.+++.|+|+++++|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9999888888 776665421 25789999999999999999999999999999999986 4
Q ss_pred ccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 536 PVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 536 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
+.+++++.|..+. ++.+.+|++++.
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~~ 310 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENVK 310 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHHH
Confidence 7889999998853 356677777763
No 89
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.78 E-value=9.2e-17 Score=170.62 Aligned_cols=216 Identities=17% Similarity=0.153 Sum_probs=144.4
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (611)
..+.+|.++++|+..++.+.+ +|++.+ ++.+++|++ |...+.+... .....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhh
Confidence 345789999999999999886 676654 899999985 5432221110 011123
Q ss_pred HHhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC---CCceEEeccc
Q 007247 392 AEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKF 465 (611)
Q Consensus 392 ~~~gl~~~~~~~~il~iGrl~~---~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~---~~~v~~~~~~ 465 (611)
+.++++. +.+++++.||... .||++.++++++++.++++.+++.|.+. ..+.+++...++ .+++.+....
T Consensus 191 ~~~~~~~--~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~ 266 (363)
T cd03786 191 ELLGLLP--KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPL 266 (363)
T ss_pred hhcccCC--CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCc
Confidence 4566652 3456778999875 7999999999999865457776666554 444555554443 2456666544
Q ss_pred ChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHHHH
Q 007247 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 544 (611)
....+..+++.||+++.+|- | ++.|||++|+|+|+++. +...+.+++|. ++. ...|++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~ 329 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILA 329 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHH
Confidence 55667789999999999984 4 57999999999999975 44566665442 332 2247999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 007247 545 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 582 (611)
Q Consensus 545 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 582 (611)
+|..++++ +..+..|. ...|.-...+++..++
T Consensus 330 ~i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 330 AIEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 99999987 54444443 2334434455555444
No 90
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.77 E-value=7.7e-17 Score=173.10 Aligned_cols=444 Identities=19% Similarity=0.239 Sum_probs=226.6
Q ss_pred eeeecCccccccHHHHhccchHHHHh-CCCeEEEEeecCCcccc----cCCC-ceEEEE---EeCCeeeEEEEEEeeecC
Q 007247 91 GTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYDQYKD----AWDT-DVVIEL---KVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 91 ~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~~~~~~----~~~~-~~~~~~---~~~~~~~~~~~~~~~~~g 161 (611)
++|... +.||+=+|+..=|+.+++ .|-+..+|.|...+... ..+. ...+.. ......-.+++-+..+.|
T Consensus 3 sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~G 80 (633)
T PF05693_consen 3 SWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIPG 80 (633)
T ss_dssp ETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESSTT
T ss_pred hhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeECC
Confidence 444433 789999999998888765 58899999886443210 0000 000000 000011345555666778
Q ss_pred ceEEE-EeCccch-------hhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEE
Q 007247 162 VDRVF-VDHPWFL-------AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233 (611)
Q Consensus 162 v~~~~-i~~~~~~-------~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh 233 (611)
.+++. +|...++ ..+|...+ +=++..+.||.+ ..-|.+.+...++.+...... ++.||.|
T Consensus 81 ~P~vIL~D~~s~~~~ldeik~~lW~~~g--IdS~~~~~dyne-a~~Fgyava~fi~~f~~~~~~---------~~~ViaH 148 (633)
T PF05693_consen 81 RPIVILFDFGSFFWKLDEIKGELWELFG--IDSPHGDGDYNE-AVMFGYAVAWFIEEFYKFYEE---------KPKVIAH 148 (633)
T ss_dssp --EEEEEEGGGGGGGHHHHHHHHHHHH-------TT-HHHHH-HHHHHHHHHHHHHHHHHH-S----------SEEEEEE
T ss_pred cCeEEEEeCchHHHHHHHHHHHHHHHcC--CCCCCCCcchhH-HHHHHHHHHHHHHHHHHhhcC---------CCcEEEE
Confidence 77664 4544333 23553322 112222222221 123333333333333322211 4788999
Q ss_pred ecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCC---CCCCCCcchhHh
Q 007247 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY---NKPVRGRKINWM 310 (611)
Q Consensus 234 ~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 310 (611)
+|+|+++...++++... ..+..|||.|.... ||+-- +-...++..+...++- .+.-...+...+
T Consensus 149 fHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~------~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iE 215 (633)
T PF05693_consen 149 FHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYLA------ANNKDFYNNLDKFNGDQEAGERNIYHKHSIE 215 (633)
T ss_dssp EESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHHT------TTSS-TTTSGTTS-HHHHHHHTT-HHHHHHH
T ss_pred echHhHhHHHHHHhccC------CCeeEEEEecccch-hhHhh------cCCCcHHHHhhccCccccccCccchHHHHHH
Confidence 99999999888888765 68999999997654 43200 0011111111111110 000011245667
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
+.+...||.+.|||+-.+.+... ++.+..=.|+|||++...+...... ..-+...++.+
T Consensus 216 raaA~~AdvFTTVSeITa~Ea~~----------LL~r~pDvV~pNGl~v~~~~~~~ef-----------qnl~~~~k~ki 274 (633)
T PF05693_consen 216 RAAAHYADVFTTVSEITAKEAEH----------LLKRKPDVVTPNGLNVDKFPALHEF-----------QNLHAKAKEKI 274 (633)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHH----------HHSS--SEE----B-GGGTSSTTHH-----------HHHHHHHHHHH
T ss_pred HHHHHhcCeeeehhhhHHHHHHH----------HhCCCCCEEcCCCccccccccchHH-----------HHHHHHHHHHH
Confidence 88889999999999999888663 1222233678999998877543210 01111223332
Q ss_pred ----HHH-hC-CCCCC-CCcEEEEEcCcc-cccCHHHHHHHHHhccc------CC---cEEEEEeCCC------------
Q 007247 391 ----QAE-VG-LPVDR-NIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTGK------------ 441 (611)
Q Consensus 391 ----~~~-~g-l~~~~-~~~~il~iGrl~-~~Kg~d~li~a~~~l~~------~~---~~lvivG~g~------------ 441 (611)
+.. +| +.-+. +...|..+||.+ .+||+|.+|+|+.+|.. .+ +-|+|+=...
T Consensus 275 ~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a 354 (633)
T PF05693_consen 275 HEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQA 354 (633)
T ss_dssp HHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHH
T ss_pred HHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHH
Confidence 322 23 22222 345677789998 69999999999998843 12 3344443321
Q ss_pred --chhHH-------------------------------------------------------------------HHHHHH
Q 007247 442 --KPMEK-------------------------------------------------------------------QLEQLE 452 (611)
Q Consensus 442 --~~~~~-------------------------------------------------------------------~l~~l~ 452 (611)
+.+.+ .++++.
T Consensus 355 ~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~ 434 (633)
T PF05693_consen 355 VTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLG 434 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCC
Confidence 00000 111111
Q ss_pred HH----CCCceEEecccC-------hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec----
Q 007247 453 IL----YPEKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---- 517 (611)
Q Consensus 453 ~~----~~~~v~~~~~~~-------~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---- 517 (611)
.. ...++.++..|. .-...+++.+||+.|+||.+||+|.+.+|+.++|+|.|+|+..|+...+.+
T Consensus 435 L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~ 514 (633)
T PF05693_consen 435 LFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIED 514 (633)
T ss_dssp ----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-H
T ss_pred CCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhcc
Confidence 00 011344444331 112346999999999999999999999999999999999999887765553
Q ss_pred -CcceEEecccccccccCCccCHHHHHHHHHHHHHhc---CHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHHc
Q 007247 518 -GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 518 -g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
...|+.+-.. ...+.++.++.|.+.+.++ ...++..+..++ +++.++|+.....|.+.|+.++..
T Consensus 515 ~~~~GV~VvdR-------~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 515 PEEYGVYVVDR-------RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp HGGGTEEEE-S-------SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred CcCCcEEEEeC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 3456654111 2344566666666555543 123333333333 468999999999999999987753
No 91
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.76 E-value=1.3e-16 Score=169.88 Aligned_cols=198 Identities=20% Similarity=0.161 Sum_probs=139.6
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
.+|.++++|+..++.+.+ .|++.+ +|.+++|++ |...+.+.. .....+++++
T Consensus 141 ~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~------------------~~~~~~~~~~ 193 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI------------------AYSSPVLSEF 193 (365)
T ss_pred HHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh------------------ccchhHHHhc
Confidence 589999999999999986 577655 899999996 432221110 0023345555
Q ss_pred CCCCCCCCcEEEEEc-Ccc-cccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHH
Q 007247 395 GLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (611)
Q Consensus 395 gl~~~~~~~~il~iG-rl~-~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (611)
+. +.+++++.+ |.+ ..||++.+++|+.++.+ ++++++++|.+.....+.+.+.. ...+++.+.........
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 52 224555555 543 45899999999999864 58899988765433333333322 23345777766666666
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
..+++.||+++.+| |..++|||+||+|+|++ +.|+..+++.++ +++++ +.|++++++++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~l 331 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKRL 331 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHHH
Confidence 67999999999887 56789999999999996 678888888766 45543 47999999999999
Q ss_pred HHhcCHHHHHHHHHH
Q 007247 550 LATYGTQALAEMMKN 564 (611)
Q Consensus 550 l~~~~~~~~~~~~~~ 564 (611)
+++ ++.+.+++.+
T Consensus 332 l~~--~~~~~~~~~~ 344 (365)
T TIGR00236 332 LTD--PDEYKKMSNA 344 (365)
T ss_pred HhC--hHHHHHhhhc
Confidence 987 6666666554
No 92
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.74 E-value=1.4e-16 Score=182.70 Aligned_cols=296 Identities=17% Similarity=0.235 Sum_probs=199.1
Q ss_pred CeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh
Q 007247 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 308 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
| +|.+||+|..++|.+++... +++++-|.+|.. ||... ++..+ | ...
T Consensus 233 D-~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiP-----FPs~E---------ifr~L--------P----~r~ 279 (934)
T PLN03064 233 D-VVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTP-----FPSSE---------IHRTL--------P----SRS 279 (934)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCcEEEEecCC-----CCChH---------HHhhC--------C----cHH
Confidence 6 99999999999999999875 789999999943 33211 11111 0 112
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcC--CCccc--chhh---hccceeEeeCCcccCCcCCCCccccccccCcchhhh
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 381 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~ 381 (611)
-+-.++..||.|-+.+..++..+.+.+. .|.+. ..+. +..++.++|-|||+..|...... .
T Consensus 280 elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~------------~ 347 (934)
T PLN03064 280 ELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET------------P 347 (934)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC------------h
Confidence 3456788999999999999988775321 12211 1110 12356778999998877533110 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeC-----CCc--hhHHHH
Q 007247 382 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGT-----GKK--PMEKQL 448 (611)
Q Consensus 382 ~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~----~~lvivG~-----g~~--~~~~~l 448 (611)
.-....+.+++.++ ++.+|+.++|++..||+...++|++++.+ |+ +.|+-+.. ++. .+..++
T Consensus 348 ~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V 422 (934)
T PLN03064 348 QVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQV 422 (934)
T ss_pred hHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHH
Confidence 00112345666654 45699999999999999999999999765 44 34443332 221 233344
Q ss_pred HHHHHH----CCC----ceEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC----ceEEcCCcccccce
Q 007247 449 EQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLVDTV 515 (611)
Q Consensus 449 ~~l~~~----~~~----~v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~e~v 515 (611)
.++... ++. -+.+.. .++.+.+..+|+.||++++||..||++++.+|||+|+. ++|.|...|..+.+
T Consensus 423 ~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L 502 (934)
T PLN03064 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL 502 (934)
T ss_pred HHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh
Confidence 444332 321 022221 24667777899999999999999999999999999954 45558888888877
Q ss_pred ecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHH
Q 007247 516 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 516 ~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+..++++ +|.|.+++|++|.++|... ++++.+..+.. ....+||...++.+++-+....
T Consensus 503 --~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 503 --GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred --CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 3347776 9999999999999999852 33333333333 3577999999998887776654
No 93
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=1.5e-15 Score=156.50 Aligned_cols=223 Identities=28% Similarity=0.449 Sum_probs=168.9
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhC
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 395 (611)
..+.+++.++.....+.. ... ..++..++|+++...+.+. ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~---------------------------~~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPA---------------------------RIG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCcc---------------------------ccC
Confidence 478899999987665553 111 1157889999998776542 011
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHH
Q 007247 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (611)
Q Consensus 396 l~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (611)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.+... ...+..+..++. .++.+.+..+.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136899999999999999999999999763 4899999999753 233333444432 457776666645666
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.+++.||++++||.+|++|++++|||++|+|||+++.++..+++.++.+|+++ .+.|.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999988778854 66689999999999998
Q ss_pred hcCHHHHHHHHH---HHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 552 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 552 ~~~~~~~~~~~~---~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+ .+.+..+.. +.....|+|+..++++.+++.....
T Consensus 342 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 D--PELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred C--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 8 344444443 2234799999999999999988754
No 94
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.69 E-value=1.2e-14 Score=144.32 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=168.3
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
..+|.+++.|.+....+.+. ++. ..+.+|+...+++.+ .+..
T Consensus 221 ~~ad~vm~NssWT~nHI~qi--W~~--------~~~~iVyPPC~~e~l----------------------------ks~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQI--WQS--------NTCSIVYPPCSTEDL----------------------------KSKF 262 (465)
T ss_pred ccceEEEecchhhHHHHHHH--hhc--------cceeEEcCCCCHHHH----------------------------HHHh
Confidence 37899999999999888763 222 156777766665432 2223
Q ss_pred CCCCCCCCcEEEEEcCcccccCHH-HHHHHHHhccc------CCcEEEEEeCCC----chhHHHHHHHHHHC--CCceEE
Q 007247 395 GLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEKARG 461 (611)
Q Consensus 395 gl~~~~~~~~il~iGrl~~~Kg~d-~li~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~v~~ 461 (611)
+. .+.+.+.++++|.+.|+|++. +-++|+-.... .+++|+|+|+-. .+..+.++.++.++ ++++.+
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 32 334568899999999999999 33444444333 479999999843 24555666666654 467888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc-cccceec---CcceEEecccccccccCCcc
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE---GFTGFQMGSFSVDCEAVDPV 537 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~---g~~G~l~~~~~~~~~~v~~~ 537 (611)
....+-+.+-.++..|.+.+..-..|.||+.+.|+||+|+-+|+.+.|| .-|+|.+ ..+||+. .
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------~ 409 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------P 409 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------C
Confidence 8777888888999999999999999999999999999999999999877 4566664 4679974 6
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHc
Q 007247 538 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 538 d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+.++.|+++..++.. +.+.+..|++++. ..+|+-....+.|...+..++.+
T Consensus 410 t~~EYaE~iLkIv~~-~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 410 TDEEYAEAILKIVKL-NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ChHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 788999999999987 3455667777665 47899999999999888888753
No 95
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=7.2e-14 Score=139.10 Aligned_cols=302 Identities=17% Similarity=0.183 Sum_probs=190.6
Q ss_pred CCCeEEEecCCcc--chHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCC
Q 007247 227 GEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 304 (611)
Q Consensus 227 ~~Dvivh~hd~~~--~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
.+| +|..++... .++.+++.... .++|.+++.||..|.-. + .+.-|...++..
T Consensus 103 ~~~-~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ysl~--------l----------~~~~g~~h~lV~ 157 (444)
T KOG2941|consen 103 PPD-IILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYSLQ--------L----------KLKLGFQHPLVR 157 (444)
T ss_pred CCc-EEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHHHH--------H----------HhhcCCCCchHH
Confidence 589 677766554 44555555443 69999999999877200 0 011222223332
Q ss_pred cchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcc-----cCC----cCCCCccccccccC
Q 007247 305 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD-----VQE----WNPLTDKYIGVKYD 375 (611)
Q Consensus 305 ~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd-----~~~----~~p~~~~~~~~~~~ 375 (611)
-....++..-+.||.-+||++.+++++.+. +|+. +..+++.--. .++ |.+.... ...|-
T Consensus 158 l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~~d--~~~f~ 225 (444)
T KOG2941|consen 158 LVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLAGD--HSPFR 225 (444)
T ss_pred HHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhccc--cchhh
Confidence 333344555668999999999999999863 5643 4445543111 000 1111000 00010
Q ss_pred cchhhhccHHHHHHHHHHhC---CCCCCCC-cEEEEEcCcccccCHHHHHHHHHhcc-----c----CCcEEEEEeCCCc
Q 007247 376 ASTVMDAKPLLKEALQAEVG---LPVDRNI-PVIGFIGRLEEQKGSDILAAAIPHFI-----K----ENVQIIVLGTGKK 442 (611)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~g---l~~~~~~-~~il~iGrl~~~Kg~d~li~a~~~l~-----~----~~~~lvivG~g~~ 442 (611)
+- ..+.+..+..++-++.. ..-.++. .+++..-..++..++.+|++|+...- + |.+-++|.|.|+
T Consensus 226 ar-~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP- 303 (444)
T KOG2941|consen 226 AR-EPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP- 303 (444)
T ss_pred hc-ccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-
Confidence 11 22334444444444433 0001122 46777778999999999999998431 1 578888899888
Q ss_pred hhHHHHHHHHHHCC-CceEEec-ccChHHHHHHHHHccEEEeC--CCC-CCCcHHHHHHHHcCCceEEcCCcccccceec
Q 007247 443 PMEKQLEQLEILYP-EKARGVA-KFNIPLAHMIIAGADFILIP--SRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 517 (611)
Q Consensus 443 ~~~~~l~~l~~~~~-~~v~~~~-~~~~~~~~~i~~~aDv~l~p--S~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 517 (611)
..+...+...+++ .++.... ....++.+.+++.||+.|+- |.. =-.|+++++..-||+||++-+...+.|+|++
T Consensus 304 -lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh 382 (444)
T KOG2941|consen 304 -LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH 382 (444)
T ss_pred -hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc
Confidence 3333333333322 3454443 44777888999999987654 433 2479999999999999999999999999999
Q ss_pred CcceEEecccccccccCCccCHHHHHHHHHHHHHhcC--HHHHHHHHHHHH-HhhCCchHHHHHHH
Q 007247 518 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKKWE 580 (611)
Q Consensus 518 g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~--~~~~~~~~~~~~-~~~fsw~~~a~~~~ 580 (611)
++||++| +|.+++++.+..+.++.. ...+.+..++.+ .+...|+..-++..
T Consensus 383 ~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 383 GENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred CCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHhh
Confidence 9999998 899999999999999753 356666666665 36677876655543
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.59 E-value=3.8e-15 Score=135.02 Aligned_cols=130 Identities=29% Similarity=0.378 Sum_probs=94.5
Q ss_pred CcEEEEEcCcccccCHHHHHH-HHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 402 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~-a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
.++|+++|++.+.||++.+++ +++++.+ ++++|+|+|.+++ .++++ .. .++.+++.. +.+.+++++||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 368999999999999999999 9999875 7899999999875 24444 22 358888777 45778999999
Q ss_pred EEEeCCC-CCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+++.|+. .|+++.+++|||++|+|||+++. +..+++.....|.+ -.+|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVL-----------VANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEE-----------ECCCHHHHHHHHHHHhcC
Confidence 9999996 58899999999999999999999 67777765666765 378999999999999875
No 97
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.56 E-value=2.1e-12 Score=138.43 Aligned_cols=190 Identities=16% Similarity=0.092 Sum_probs=119.6
Q ss_pred HHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHH
Q 007247 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (611)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (611)
+...+.+|+|++.++...+.+.. +|. +..++.|++-........ .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 34566899999999998887764 232 445566665222111001 14456
Q ss_pred HHHhCCCCCCCCcEEEEE--cCccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEec
Q 007247 391 QAEVGLPVDRNIPVIGFI--GRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVA 463 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~i--Grl~~-~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~ 463 (611)
++++|++. +.++|++. +|..+ .|++..++++++.+.+ +++++++.+.... ..+.++++...+. .++...
T Consensus 182 r~~lgl~~--~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~- 257 (385)
T TIGR00215 182 REKLGIDH--NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI- 257 (385)
T ss_pred HHHcCCCC--CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE-
Confidence 77888864 44666654 37777 7999999999999865 5788877654321 3344555444432 233322
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-Ccccc----------------cceecCcceEEecc
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----------------DTVEEGFTGFQMGS 526 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----------------e~v~~g~~G~l~~~ 526 (611)
..+ ...+|+.||++|.+| |.+.+|+|++|+|+|+.. .+.+. .++.+. +..
T Consensus 258 --~~~-~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~--~~~--- 324 (385)
T TIGR00215 258 --DGD-ARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR--LLV--- 324 (385)
T ss_pred --Cch-HHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC--ccc---
Confidence 222 346999999999999 788889999999988873 22222 122211 110
Q ss_pred cccccccC-CccCHHHHHHHHHHHHHh
Q 007247 527 FSVDCEAV-DPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 527 ~~~~~~~v-~~~d~~~la~~i~~ll~~ 552 (611)
.++. +.-+++.+++.+.++++|
T Consensus 325 ----pel~q~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 325 ----PELLQEECTPHPLAIALLLLLEN 347 (385)
T ss_pred ----hhhcCCCCCHHHHHHHHHHHhcC
Confidence 0111 445789999999999987
No 98
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.50 E-value=1.4e-12 Score=140.07 Aligned_cols=296 Identities=15% Similarity=0.141 Sum_probs=198.7
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|-.||+|..++|.+++... ++.++-|..|-. ||..+ ++..+ | ..
T Consensus 124 ~D-~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiP-----FPs~e---------ifr~L--------P----~r 170 (474)
T PRK10117 124 DD-IIWIHDYHLLPFASELRKRG------VNNRIGFFLHIP-----FPTPE---------IFNAL--------P----PH 170 (474)
T ss_pred CC-EEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCC-----CCChH---------HHhhC--------C----Ch
Confidence 36 99999999999999999875 789999999943 33221 11110 0 11
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccc--hhh----hccceeEeeCCcccCCcCCCCccccccccCcchh
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (611)
.-+-.++..+|.|-+.+..+++.+.+... .|.+.. ..+ +..++.+.|-|+|++.|......
T Consensus 171 ~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~----------- 239 (474)
T PRK10117 171 DELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG----------- 239 (474)
T ss_pred HHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc-----------
Confidence 33456788999999999999987775221 122110 001 22357778888888776432110
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----c---hhHH
Q 007247 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PMEK 446 (611)
Q Consensus 380 ~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~---~~~~ 446 (611)
........+++.++ ++.+|+-+.|++..||+..=++|++++.+ .++.|+-+.... + ++..
T Consensus 240 --~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~ 312 (474)
T PRK10117 240 --PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRH 312 (474)
T ss_pred --hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHH
Confidence 00112344565554 45689999999999999999999999876 378888776643 1 3445
Q ss_pred HHHHHHHH----CCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCcccc
Q 007247 447 QLEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLV 512 (611)
Q Consensus 447 ~l~~l~~~----~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~ 512 (611)
+++++... ++. -+.+. -.++.+.+..+|+.||+++++|..+|+.++..|+.+|.. +.|.|...|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA 392 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 392 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchH
Confidence 55554443 321 12211 124666777899999999999999999999999999965 37888877777
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+.+.+ .++ |+|.|.+++|++|.++|+.+..++..++..-. ....++...-++.+++-+..+.
T Consensus 393 ~~L~~---All----------VNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 393 NELTS---ALI----------VNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHhCC---CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 77742 344 49999999999999999985434433332221 2466777777777776666553
No 99
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.50 E-value=1.1e-12 Score=144.55 Aligned_cols=162 Identities=13% Similarity=0.078 Sum_probs=133.2
Q ss_pred cEEEEEc--CcccccCHHHHHHHHHhccc--CCcEEEEEeCCCc-hhHHHHHHHHHHCC---------------------
Q 007247 403 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILYP--------------------- 456 (611)
Q Consensus 403 ~~il~iG--rl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~-~~~~~l~~l~~~~~--------------------- 456 (611)
..+++++ |+ +.|.++.+|+++.++.. |+++|.+.|.+.. ++.+.++++..++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4688888 99 99999999999999954 8999999999873 34455544433221
Q ss_pred ----------CceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecc
Q 007247 457 ----------EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 526 (611)
Q Consensus 457 ----------~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~ 526 (611)
..+.+.+..+...+...+..+.++|.+|..|+++ .++||++.|+|+| .-|..++|.+++||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 2344443334445668999999999999999999 9999999999999 55679999999999986
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 583 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (611)
+|.++|+++|..+|.+ +..+.++...++ .++||-+.+.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 8999999999999998 888888888875 59999999999998864
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.48 E-value=8.1e-12 Score=135.79 Aligned_cols=295 Identities=18% Similarity=0.207 Sum_probs=167.0
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... +++++.|..|.. ||.. +.+..+. ..
T Consensus 142 ~D-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~---------e~fr~lP------------~r 188 (474)
T PF00982_consen 142 GD-LVWVHDYHLMLLPQMLRERG------PDARIGFFLHIP-----FPSS---------EIFRCLP------------WR 188 (474)
T ss_dssp T--EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------H---------HHHTTST------------TH
T ss_pred CC-EEEEeCCcHHHHHHHHHhhc------CCceEeeEEecC-----CCCH---------HHHhhCC------------cH
Confidence 46 99999999999999999876 789999999943 3221 1111110 12
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCc--CCCcccchh-------hhccceeEeeCCcccCCcCCCCccccccccCcch
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI-------IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~~-------~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 378 (611)
..+-.++..||.|-+.+..+++.+.+.. ..|++...- -+..++.+.|-|+|++.+......
T Consensus 189 ~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~---------- 258 (474)
T PF00982_consen 189 EEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS---------- 258 (474)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-----------
T ss_pred HHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC----------
Confidence 3445678899999999999998876532 122221110 012346667777777655311000
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----c---hhH
Q 007247 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PME 445 (611)
Q Consensus 379 ~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~---~~~ 445 (611)
..-....+.+++.++- +..+|+-+.|++..||+..=++|++++.+ .++.|+-++... + ++.
T Consensus 259 --~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~ 332 (474)
T PF00982_consen 259 --PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELR 332 (474)
T ss_dssp --S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHH
T ss_pred --hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHH
Confidence 0001123456666641 24799999999999999999999999976 378888777643 1 233
Q ss_pred HHHHHHHH----HCCC----ceEEec-ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCcccc
Q 007247 446 KQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 512 (611)
Q Consensus 446 ~~l~~l~~----~~~~----~v~~~~-~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 512 (611)
++++++.. +++. -+.++- ..+.+.+-.+|+.||+++++|..+|..++..|+.+|... +|.|...|..
T Consensus 333 ~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 333 REVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp HHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred HHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 44444433 3432 133332 346677778999999999999999999999999999765 7888888888
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCchHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~~ 583 (611)
+.+.++. +++ +|.|.+++|++|.++|+.+..++...+.+.. ....++...-++.+++-+
T Consensus 413 ~~L~~~a--l~V----------NP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 413 EQLSEAA--LLV----------NPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp GT-TTS---EEE-----------TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHcCCcc--EEE----------CCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 8886542 544 9999999999999999984333333222211 245666665555555443
No 101
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.38 E-value=3.5e-12 Score=119.91 Aligned_cols=176 Identities=23% Similarity=0.291 Sum_probs=92.4
Q ss_pred EEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007247 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (611)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (611)
|+++... .+. .||++.++.+|+++|+++||+|+++++......... ... ..
T Consensus 1 ili~~~~-~~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---------------~~~-----------~~ 51 (177)
T PF13439_consen 1 ILITNIF-LPN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---------------LVK-----------IF 51 (177)
T ss_dssp -EEECC--TTS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---------------EEE-----------E-
T ss_pred CEEEEec-CCC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---------------ccc-----------ee
Confidence 4555554 453 899999999999999999999999998754332210 000 00
Q ss_pred EeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHHH
Q 007247 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYL 246 (611)
Q Consensus 167 i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l 246 (611)
...+.. ......+.......+.+.++.. +|| |||+|.+.........
T Consensus 52 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~~ 98 (177)
T PF13439_consen 52 VKIPYP--------------------IRKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALLA 98 (177)
T ss_dssp --TT-S--------------------STSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHHH
T ss_pred eeeecc--------------------cccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHHh
Confidence 000000 0011112222334444444443 599 8899987765544333
Q ss_pred HHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHH
Q 007247 247 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 326 (611)
Q Consensus 247 ~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 326 (611)
.. ++|+++++|+......+ ...... +.......+++...+.+|.++++|+.
T Consensus 99 ~~---------~~~~v~~~H~~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~~~~~ii~vS~~ 149 (177)
T PF13439_consen 99 CR---------KVPIVYTIHGPYFERRF-------LKSKLS-------------PYSYLNFRIERKLYKKADRIIAVSES 149 (177)
T ss_dssp HH---------CSCEEEEE-HHH--HHT-------TTTSCC-------------CHHHHHHCTTHHHHCCSSEEEESSHH
T ss_pred cc---------CCCEEEEeCCCcccccc-------cccccc-------------hhhhhhhhhhhhHHhcCCEEEEECHH
Confidence 32 68999999975531000 000000 00001122234456789999999999
Q ss_pred HHHHHHcCcCCCcccchhhhccceeEeeCCcccCCc
Q 007247 327 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 362 (611)
Q Consensus 327 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~ 362 (611)
.++++.+ +|++.+ ++.+|+||+|.+.|
T Consensus 150 ~~~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 150 TKDELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHHHH---hCCccc------CCEEEECCccHHHc
Confidence 9999996 565544 89999999999876
No 102
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.35 E-value=8.5e-11 Score=136.02 Aligned_cols=298 Identities=14% Similarity=0.175 Sum_probs=195.3
Q ss_pred CeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh
Q 007247 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 308 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
| +|..||+|..++|.+|+... +++++.|..|.. ||... .+..+. ...
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~e---------ifr~LP------------~r~ 249 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSP-----FPSSE---------IYKTLP------------IRE 249 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecCC-----CCChH---------HHhhCC------------cHH
Confidence 7 99999999999999999875 789999999943 33211 111110 112
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcC--CCcccch-----hh----hccceeEeeCCcccCCcCCCCccccccccCcc
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 377 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~ 377 (611)
-+-.++..||.|-+.+..+++.+.+... .|++.+. -+ |..++.+.|-|+|...|......
T Consensus 250 eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~--------- 320 (854)
T PLN02205 250 ELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--------- 320 (854)
T ss_pred HHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC---------
Confidence 3456788999999999999988776321 2222111 00 33456777888887766322110
Q ss_pred hhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCC----c---hh
Q 007247 378 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PM 444 (611)
Q Consensus 378 ~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~----~~~lvivG~g~----~---~~ 444 (611)
..-.....+++++++- +++.+|+-+.|++..||+..=++|+++|.+ | ++.|+-+.... + ++
T Consensus 321 ---~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~ 394 (854)
T PLN02205 321 ---PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEV 394 (854)
T ss_pred ---hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHH
Confidence 0001123345655542 245799999999999999999999999976 2 67787776543 1 23
Q ss_pred HHHHHHHH----HHCCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC--------------
Q 007247 445 EKQLEQLE----ILYPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-------------- 501 (611)
Q Consensus 445 ~~~l~~l~----~~~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~-------------- 501 (611)
...++++. .+++. -+.+. -.++.+.+-.+|+.||++++++..+|+.++..|+.+|..
T Consensus 395 ~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 395 QAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccc
Confidence 33344443 34431 13322 234656667899999999999999999999999999854
Q ss_pred -----ceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhhCCchHH
Q 007247 502 -----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGP 575 (611)
Q Consensus 502 -----PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~ 575 (611)
+.|.|...|....+. + -++ |.|.|.+++|++|.++|..+..++..++.+.. ....++....
T Consensus 475 ~~~~gvLiLSEfaGaa~~L~-~--Ai~----------VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSLS-G--AIR----------VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred cCCCCceEeeeccchhHHhC-c--CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 366676666555553 2 343 49999999999999999985444433332221 2456677777
Q ss_pred HHHHHHHHHHHH
Q 007247 576 AKKWEETLLNLE 587 (611)
Q Consensus 576 a~~~~~~~~~l~ 587 (611)
++.++.-++.+.
T Consensus 542 ~~~fl~~l~~~~ 553 (854)
T PLN02205 542 ARSFLQDLERTC 553 (854)
T ss_pred HHHHHHHHHHHH
Confidence 777666665553
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.33 E-value=4.2e-12 Score=117.30 Aligned_cols=159 Identities=23% Similarity=0.239 Sum_probs=84.9
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceEEEEeCccchhhhcCCC
Q 007247 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180 (611)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~ 180 (611)
||++.++.+|+++|+++||+|+++++..+...+. ....|+.++.+..+.....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~----- 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPWP----- 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSSG-----
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccchh-----
Confidence 8999999999999999999999999875443221 1134556555533211100
Q ss_pred CccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHHHHHHhccCCCCCCCce
Q 007247 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 260 (611)
Q Consensus 181 ~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k 260 (611)
.... + +...+..++.... .+|| +||+|++..++++..++.. .++|
T Consensus 54 -------------~~~~-~---~~~~~~~~l~~~~----------~~~D-vv~~~~~~~~~~~~~~~~~-------~~~p 98 (160)
T PF13579_consen 54 -------------LRLL-R---FLRRLRRLLAARR----------ERPD-VVHAHSPTAGLVAALARRR-------RGIP 98 (160)
T ss_dssp -------------GGHC-C---HHHHHHHHCHHCT-------------S-EEEEEHHHHHHHHHHHHHH-------HT--
T ss_pred -------------hhhH-H---HHHHHHHHHhhhc----------cCCe-EEEecccchhHHHHHHHHc-------cCCc
Confidence 0001 1 1122222221111 2699 9999997766666666634 4899
Q ss_pred EEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCc-chhHhHHHhhhccEEEecCHHHHHHHHcCcCCCc
Q 007247 261 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-KINWMKAGILESDMVLTVSPHYAQELVSGEDKGV 339 (611)
Q Consensus 261 ~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~ 339 (611)
+|+++|+...... ..+ ..+ ...+++..+..+|.++++|+..++.+.+ +|+
T Consensus 99 ~v~~~h~~~~~~~------------~~~--------------~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 99 LVVTVHGTLFRRG------------SRW--------------KRRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp EEEE-SS-T------------------H--------------HHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred EEEEECCCchhhc------------cch--------------hhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 9999996432110 000 001 1234567888999999999999999996 666
Q ss_pred ccchhhhccceeEeeCC
Q 007247 340 ELDNIIRKTGIKGIVNG 356 (611)
Q Consensus 340 ~~~~~~~~~~i~vI~Ng 356 (611)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 655 99999998
No 104
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.2e-09 Score=116.98 Aligned_cols=294 Identities=17% Similarity=0.222 Sum_probs=190.2
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcch
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
-| +|..||+|..++|.+++... +..++.|.+|-.. |.. +.++++. ..
T Consensus 148 gD-iIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPf-----Pss---------Evfr~lP------------~r 194 (486)
T COG0380 148 GD-IIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIPF-----PSS---------EVFRCLP------------WR 194 (486)
T ss_pred CC-EEEEEechhhhhHHHHHHhC------CCceEEEEEeCCC-----CCH---------HHHhhCc------------hH
Confidence 47 99999999999999999886 7889999999433 321 1211111 01
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCC--C------cccchh-hhccceeEeeCCcccCCcCCCCccccccccCcch
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDK--G------VELDNI-IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~--g------~~~~~~-~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 378 (611)
.-+-.++..||.|-+.++.+++.+.+.... + +..+.. -+..++..+|-|+|+..|.-.... +..
T Consensus 195 ~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~-------~~v 267 (486)
T COG0380 195 EEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS-------PSV 267 (486)
T ss_pred HHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC-------Cch
Confidence 223457789999999999999877653211 1 110000 011256667888988776432110 000
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----ch---hH
Q 007247 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP---ME 445 (611)
Q Consensus 379 ~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~~---~~ 445 (611)
.....++++.++- ++.+|+.+.|++.-||+..=+.|+++|.+ .++.++-++... .. +.
T Consensus 268 -----~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~ 338 (486)
T COG0380 268 -----QEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALR 338 (486)
T ss_pred -----hhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHH
Confidence 0123345555442 36789999999999999999999999985 378888888764 12 34
Q ss_pred HHHHHHHH----HCCC----ceEEe-cccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCC----ceEEcCCcccc
Q 007247 446 KQLEQLEI----LYPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLV 512 (611)
Q Consensus 446 ~~l~~l~~----~~~~----~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~ 512 (611)
.+++++.. +++. -+.++ -..+.+++..++..||+++++|..||+.++..|+.+|-- |.|.|...|..
T Consensus 339 ~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 339 LQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred HHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 44444443 3331 12222 124667777899999999999999999999999999843 67777766666
Q ss_pred cceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007247 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 513 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (611)
..+.+ -+++ .|.|.+++|++|.++|+.+..++...+ +..+ ...++....+..+++-+.
T Consensus 419 ~~L~~---AliV----------NP~d~~~va~ai~~AL~m~~eEr~~r~-~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 419 SELRD---ALIV----------NPWDTKEVADAIKRALTMSLEERKERH-EKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred hhhcc---CEeE----------CCCChHHHHHHHHHHhcCCHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 66654 3544 999999999999999998432222222 2221 244555555555444433
No 105
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.6e-10 Score=128.45 Aligned_cols=411 Identities=20% Similarity=0.241 Sum_probs=254.1
Q ss_pred CccccccHHHHhccchHHHHhCCCeEEEEeecCCcc--------------cccCCC------------ce--EEEEEeCC
Q 007247 96 PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY--------------KDAWDT------------DV--VIELKVGD 147 (611)
Q Consensus 96 P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~--------------~~~~~~------------~~--~~~~~~~~ 147 (611)
|-. .||+|+........++..|.-.+.+..+|.+. .+.|.. .. ...+...+
T Consensus 111 p~l-gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~ 189 (750)
T COG0058 111 PGL-GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYD 189 (750)
T ss_pred ccc-cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEecc
Confidence 543 49999999999999999999999998876531 111211 01 22333333
Q ss_pred -eeeEEEEEEeeecCceEEEEeCccchhhhcCCC-CccccCCCCCCCCcchHHHH---HHHHHHHHHhhHHh-ccCCCCC
Q 007247 148 -KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT-QSKIYGPRTGEDYQDNQLRF---SLLCQAALEAPRIL-NLNSNKY 221 (611)
Q Consensus 148 -~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~-~~~iy~~~~~~~~~~~~~r~---~~~~~~~~~~~~~l-~~~~~~~ 221 (611)
....+|.+......+++++.+...--.+.|.+. -..+|+..+ +.+|+ .+|+.+.++.+..+ ....
T Consensus 190 ~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds------~elRl~Qeyfl~~agvq~I~~~~~~~~--- 260 (750)
T COG0058 190 NRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS------KELRLKQEYFLGSAGVQDILARGHLEH--- 260 (750)
T ss_pred CcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc------HHHHHhhhheeeeHHHHHHHHHhhhcc---
Confidence 456667776666566777765432111111111 125665432 34454 45666667666655 1110
Q ss_pred CCCCCCCCeEEEecCCccchHHH-HHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCcccccc
Q 007247 222 FSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFKSS 291 (611)
Q Consensus 222 ~~~~~~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~~~~~~ 291 (611)
+...+. +.|.||-|.+++.. .++.....+|+ ....-++||.|...+.+ .|+...+..+- |..+.--
T Consensus 261 --~~~~~~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~l-pr~~~ii 336 (750)
T COG0058 261 --HDLDVL-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLL-PRHLQII 336 (750)
T ss_pred --ccccch-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHh-hhhhhhH
Confidence 011234 77899988866544 34423322222 12357899999886655 35544442211 1000000
Q ss_pred c----ccccCC-----------CCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccceeEe
Q 007247 292 F----DFIDGY-----------NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGI 353 (611)
Q Consensus 292 ~----~~~~~~-----------~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI 353 (611)
. .|.... ..+... +++--.++..|..+..||.-+.+.++... .+++. +.+|.-+
T Consensus 337 ~~in~~~l~~~~~~~~~~~~~~~~~i~~--v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~------p~~i~nv 408 (750)
T COG0058 337 YEINARFLPEVRLLYLGDLIRRGSPIEE--VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLY------PEKINNV 408 (750)
T ss_pred HHHHhhhhHHHHhhccccccccCCcccc--eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccC------ccccccc
Confidence 0 000000 000000 34444567788889999998887765421 12222 4488899
Q ss_pred eCCcccCCcCCCCccccccccCcc--------------------------hhhhccHHHH----HHHHHHhCCCCCCCCc
Q 007247 354 VNGMDVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLK----EALQAEVGLPVDRNIP 403 (611)
Q Consensus 354 ~Ngvd~~~~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~~----~~~~~~~gl~~~~~~~ 403 (611)
.||+....|-....+.+...|+.. -+...|...+ +.+..+.|+..+++..
T Consensus 409 TNGIt~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~l 488 (750)
T COG0058 409 TNGITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNAL 488 (750)
T ss_pred cCCcCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcc
Confidence 999999988655444444444433 1122233333 3344567888888999
Q ss_pred EEEEEcCcccccCHHHHHHHHHhc----cc---CCcEEEEEeCCCc------hhHHHHHHHHHHC--CCceEEecccChH
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHF----IK---ENVQIIVLGTGKK------PMEKQLEQLEILY--PEKARGVAKFNIP 468 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l----~~---~~~~lvivG~g~~------~~~~~l~~l~~~~--~~~v~~~~~~~~~ 468 (611)
+++++-|+.++|...+.+.-+..+ ++ +.+++++.|...+ .+.+.+...+... ..+|.++..++..
T Consensus 489 fd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvs 568 (750)
T COG0058 489 FDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVS 568 (750)
T ss_pred eeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChh
Confidence 999999999999988876554444 32 4688888888653 3444444444432 2468899999999
Q ss_pred HHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCccccccee--cCcceEEecccc
Q 007247 469 LAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFS 528 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~l~~~~~ 528 (611)
.+..++.+||+....|.. |.+|..-+-+|..|.+.|+|-.|..+|+.+ .+.|||+||...
T Consensus 569 lA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 569 LAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred HHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence 999999999999998875 999999999999999999999999999997 789999998554
No 106
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.23 E-value=1.2e-08 Score=107.90 Aligned_cols=167 Identities=16% Similarity=0.157 Sum_probs=96.3
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCH-HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~-d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
..++.++++. ++++|+.+|.=.-.+.+ +.+.+++..+. ++++++++ .|..++++.+.. +. ++.. ..|..
T Consensus 174 ~~~~~~~l~~--~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~-~G~~~~~~~~~~----~~-~~~~-~~f~~ 243 (352)
T PRK12446 174 KGLAFLGFSR--KKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHL-CGKGNLDDSLQN----KE-GYRQ-FEYVH 243 (352)
T ss_pred HHHHhcCCCC--CCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEE-eCCchHHHHHhh----cC-CcEE-ecchh
Confidence 4455677653 45666666553334445 44445555553 34776553 233334444332 12 2222 24443
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc-----c----cccceecCcceEEecccccccccCCccC
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~v~~g~~G~l~~~~~~~~~~v~~~d 538 (611)
+.++.+|+.||++|.- +-+.++.|++++|+|.|.-... + ..+.+.+.+.+..+ .-+.-+
T Consensus 244 ~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~~~ 311 (352)
T PRK12446 244 GELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEEDVT 311 (352)
T ss_pred hhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhcCC
Confidence 4566799999988843 3478999999999999887532 1 12233344455543 012336
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
++.+.+++.++++| ++.+.+ ....+.....++++.++++
T Consensus 312 ~~~l~~~l~~ll~~--~~~~~~-----~~~~~~~~~aa~~i~~~i~ 350 (352)
T PRK12446 312 VNSLIKHVEELSHN--NEKYKT-----ALKKYNGKEAIQTIIDHIS 350 (352)
T ss_pred HHHHHHHHHHHHcC--HHHHHH-----HHHHcCCCCHHHHHHHHHH
Confidence 78999999999877 544432 2234666666766666554
No 107
>PRK14986 glycogen phosphorylase; Provisional
Probab=99.17 E-value=3.4e-09 Score=119.38 Aligned_cols=290 Identities=18% Similarity=0.209 Sum_probs=186.6
Q ss_pred CeEEEecCCccchHHHH-HHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCc----------cc
Q 007247 229 DVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QF 288 (611)
Q Consensus 229 Dvivh~hd~~~~~~~~~-l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~----------~~ 288 (611)
.++||.||-|++++..- ++......|+ .....++||.|...+.+ .|+.+.+..+- |+ .+
T Consensus 314 ~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~l-pr~l~Ii~eIn~~f 392 (815)
T PRK14986 314 KIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKIL-PRHLQIIFEINDYF 392 (815)
T ss_pred ccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHc-cHhhhHHHHHHHHH
Confidence 44999999888665444 4333222111 13457899999886644 46655543321 11 11
Q ss_pred cccc--cccc-----CCC---CCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccceeEeeC
Q 007247 289 KSSF--DFID-----GYN---KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVN 355 (611)
Q Consensus 289 ~~~~--~~~~-----~~~---~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~N 355 (611)
...+ .+.. +.. ..-.+..+++-..++..|..+-.||.-..+.+.+.. .+..- +.++.-|.|
T Consensus 393 l~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~------P~kf~niTN 466 (815)
T PRK14986 393 LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIF------PGRFCNVTN 466 (815)
T ss_pred HHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhC------CCcccccCC
Confidence 1000 0000 000 000012355566677788889999988777653211 11122 236777999
Q ss_pred CcccCCcC----CCCcc----ccccc-------------c-Ccch----hhhccHHHHH----HHHHHhCCCCCCCCcEE
Q 007247 356 GMDVQEWN----PLTDK----YIGVK-------------Y-DAST----VMDAKPLLKE----ALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 356 gvd~~~~~----p~~~~----~~~~~-------------~-~~~~----~~~~~~~~~~----~~~~~~gl~~~~~~~~i 405 (611)
|++...|- |.-.. ++... + +..+ +.+.|...|. .++++.|+..+++...+
T Consensus 467 GV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd 546 (815)
T PRK14986 467 GVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFD 546 (815)
T ss_pred CCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCccccee
Confidence 99998885 22111 11101 1 1111 2233333333 35567799889999999
Q ss_pred EEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCCc------hhHHHHHHHHH------HCCC--ceEE
Q 007247 406 GFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEI------LYPE--KARG 461 (611)
Q Consensus 406 l~iGrl~~~Kg~d~-li~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~------~~~~--~v~~ 461 (611)
+++-|+.++|...+ ++..+.++ ++ + +.++++.|...+ .+-+.+-.++. ...+ ++.+
T Consensus 547 ~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVF 626 (815)
T PRK14986 547 VQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVF 626 (815)
T ss_pred eeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEE
Confidence 99999999999999 66665444 33 2 688999998653 34445545554 2223 6888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
+..++..++..++.+||+....|+. |.+|..=+-+|..|.+.+++-.|...|+.++ +.|||.||
T Consensus 627 lenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 627 IPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred eCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 9999999999999999999999874 9999999999999999999999999999987 88999995
No 108
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.14 E-value=2e-10 Score=96.92 Aligned_cols=89 Identities=22% Similarity=0.303 Sum_probs=79.3
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHH
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 558 (611)
+.|.|++.++++..++|+|+||+|+|+++.+++.+++.++.+++.+ + |++++.++|..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~----------~--~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY----------N--DPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE----------C--CHHHHHHHHHHHHCC--HHHH
Confidence 3678999999999999999999999999999999999999899976 4 999999999999998 7777
Q ss_pred HHHHHHH---HHhhCCchHHHHHHHH
Q 007247 559 AEMMKNG---MAQDLSWKGPAKKWEE 581 (611)
Q Consensus 559 ~~~~~~~---~~~~fsw~~~a~~~~~ 581 (611)
.++++++ +.++|||+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 7777766 4689999999999863
No 109
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.12 E-value=2.1e-09 Score=116.05 Aligned_cols=177 Identities=8% Similarity=0.022 Sum_probs=132.5
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
.+.|.||+.++...+.+.+.... ..++.+||-|+-.. + +..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~-~-~~~---------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP-F-KKD---------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe-e-ccc----------------------------
Confidence 57899999998877777642211 12556666665321 1 110
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHH
Q 007247 395 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (611)
Q Consensus 395 gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (611)
++....++.++. +..|+++++|.+ |+++|.| |.+.. +...|.++ .+++ ++..+..+..+.+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y~-nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKYD-NVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-HhcC-CcEEECCcChHHHHH
Confidence 112345666662 889999999866 8999999 77653 56888888 6674 577777877767779
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
++..||+++-.|..|++++++.||+..|+|+|+-+. -|..+++.+ |.++ +.+|+++|+++|..+|.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999884 456677766 6766 99999999999999999
Q ss_pred hcCHHHHHH
Q 007247 552 TYGTQALAE 560 (611)
Q Consensus 552 ~~~~~~~~~ 560 (611)
+ +..+.+
T Consensus 411 d--~~~~~~ 417 (438)
T TIGR02919 411 D--PNQFRE 417 (438)
T ss_pred C--HHHHHH
Confidence 8 544443
No 110
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.10 E-value=1.8e-07 Score=98.43 Aligned_cols=342 Identities=17% Similarity=0.148 Sum_probs=186.5
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCe-EEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCce
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~-V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (611)
|+|++... -+||--.....++++|.++|++ |.++...+. .+ .+-....|+.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~--~e--------------------~~l~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDG--LE--------------------AFLVKQYGIE 52 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEeccccc--ce--------------------eeeccccCce
Confidence 45555553 2566666777799999999995 555532211 11 0111112556
Q ss_pred EEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHH
Q 007247 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (611)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~ 243 (611)
++.++...+..+ . ...+......+++...++.+.+.. ++||+||-++.+.+.. +
T Consensus 53 ~~~I~~~~~~~~----------~------~~~~~~~~~~~~~~~~~a~~il~~---------~kPd~vig~Ggyvs~P-~ 106 (357)
T COG0707 53 FELIPSGGLRRK----------G------SLKLLKAPFKLLKGVLQARKILKK---------LKPDVVIGTGGYVSGP-V 106 (357)
T ss_pred EEEEeccccccc----------C------cHHHHHHHHHHHHHHHHHHHHHHH---------cCCCEEEecCCccccH-H
Confidence 666654433221 0 112333334556666665555543 4899666556555543 3
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEec
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (611)
.+.... .++|++++..|... | ..+ +.....++.|.+.
T Consensus 107 ~~Aa~~-------~~iPv~ihEqn~~~-G--------------------------------~an---k~~~~~a~~V~~~ 143 (357)
T COG0707 107 GIAAKL-------LGIPVIIHEQNAVP-G--------------------------------LAN---KILSKFAKKVASA 143 (357)
T ss_pred HHHHHh-------CCCCEEEEecCCCc-c--------------------------------hhH---HHhHHhhceeeec
Confidence 333333 47999888776543 1 111 2234566776665
Q ss_pred CHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007247 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (611)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 403 (611)
-+.. . -+.+ +.++.+.-|.+..+... .. ....+..... +++
T Consensus 144 f~~~----~----~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~~ 184 (357)
T COG0707 144 FPKL----E----AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DKK 184 (357)
T ss_pred cccc----c----ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CCc
Confidence 4431 1 1111 22566666666655443 11 1111111111 456
Q ss_pred EEEEEcC-cccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 404 VIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 404 ~il~iGr-l~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+|+.+|. ..-.+=-+.+.++...+.+ +++++...+.. .+++..+.+ .++.. .....|..+ +..+|+.||+++.
T Consensus 185 ~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~-~~~~~~~~~-~~~~~--~~v~~f~~d-m~~~~~~ADLvIs 258 (357)
T COG0707 185 TILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN-DLEELKSAY-NELGV--VRVLPFIDD-MAALLAAADLVIS 258 (357)
T ss_pred EEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc-hHHHHHHHH-hhcCc--EEEeeHHhh-HHHHHHhccEEEe
Confidence 6666555 4444433444444555533 67776655333 233333333 23322 334455555 5579999999993
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCccc--------ccceecCcceEEecccccccccCCccC--HHHHHHHHHHHHHh
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 552 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~i~~ll~~ 552 (611)
+ +=++++.|..++|+|.|.-..+.- ...+.+.+-+.++ +..+ ++.+.+.|.+++++
T Consensus 259 --R--aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~~ 324 (357)
T COG0707 259 --R--AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLSN 324 (357)
T ss_pred --C--CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhcC
Confidence 3 346999999999999888764432 2233445556665 4444 89999999999998
Q ss_pred cCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007247 553 YGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 553 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l 586 (611)
++.+.+|..++ +.+.-...++++.++....
T Consensus 325 --~~~l~~m~~~a--~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 325 --PEKLKAMAENA--KKLGKPDAAERIADLLLAL 354 (357)
T ss_pred --HHHHHHHHHHH--HhcCCCCHHHHHHHHHHHH
Confidence 78888887775 3444555566665555544
No 111
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=99.10 E-value=3.1e-09 Score=119.23 Aligned_cols=291 Identities=15% Similarity=0.181 Sum_probs=183.9
Q ss_pred CCCeEEEecCCccchHHH-HHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCcccc---c-cc
Q 007247 227 GEDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK---S-SF 292 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~~~~---~-~~ 292 (611)
.+. +||.||-|++++.. .++......|+ .....++||.|...+.+ .|+.+.+..+- |+.+. . .-
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~L-pr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLL-PRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHh-HHHHHHHHHHHH
Confidence 466 99999988866444 44433322111 23457899999886544 45554443221 11100 0 00
Q ss_pred ccc----cCCCC---------CCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcC---CCcccchhhhccceeEeeCC
Q 007247 293 DFI----DGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED---KGVELDNIIRKTGIKGIVNG 356 (611)
Q Consensus 293 ~~~----~~~~~---------~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~---~g~~~~~~~~~~~i~vI~Ng 356 (611)
.|. ..+.. .+....+++-..++..|..|--||.-..+.+.+... +.+- +.++.-|.||
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~------p~kf~nvTNG 453 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLW------PNKFHNVTNG 453 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhC------CCccCCcCCC
Confidence 000 00000 000113445555666777888888776665443111 1111 3367789999
Q ss_pred cccCCcC----CCCcc----ccc-------------cccCc-ch----hhhccHHHHH----HHHHHhCCCCCCCCcEEE
Q 007247 357 MDVQEWN----PLTDK----YIG-------------VKYDA-ST----VMDAKPLLKE----ALQAEVGLPVDRNIPVIG 406 (611)
Q Consensus 357 vd~~~~~----p~~~~----~~~-------------~~~~~-~~----~~~~~~~~~~----~~~~~~gl~~~~~~~~il 406 (611)
|+...|- |.-.. ++. .+|.. .. +.+.|...|. .++++.|+..+++...++
T Consensus 454 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdv 533 (798)
T PRK14985 454 ITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDV 533 (798)
T ss_pred cCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchh
Confidence 9998884 32111 111 01222 12 1233333333 455777988888989999
Q ss_pred EEcCcccccCHHH-HHHHHHhccc----C-----CcEEEEEeCCCc------hhHHHHHHHHHHC------CC--ceEEe
Q 007247 407 FIGRLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGKK------PMEKQLEQLEILY------PE--KARGV 462 (611)
Q Consensus 407 ~iGrl~~~Kg~d~-li~a~~~l~~----~-----~~~lvivG~g~~------~~~~~l~~l~~~~------~~--~v~~~ 462 (611)
++-|+.++|...+ ++..+.++.+ + +.++++.|...+ .+-+.+..++... .+ ++.++
T Consensus 534 q~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 613 (798)
T PRK14985 534 QIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613 (798)
T ss_pred hHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEe
Confidence 9999999999999 7666554432 2 488999998653 3344444444322 12 68888
Q ss_pred cccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 463 AKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 463 ~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
..++..++..++.+||+....|+. |.+|..=+-+|..|.+.|++-.|...|+.++ +.|||.||
T Consensus 614 enY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred CCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 899999999999999999998874 9999999999999999999999999999886 78999996
No 112
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.08 E-value=1.3e-08 Score=115.08 Aligned_cols=287 Identities=18% Similarity=0.213 Sum_probs=189.2
Q ss_pred CCCeEEEecCCccchHHH-HHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCccc--------
Q 007247 227 GEDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQF-------- 288 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~-~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~~~-------- 288 (611)
++. +||.||-|++++.. .++.....+|+ .....++||.|...+.+ .++.+.+..+- |+.+
T Consensus 300 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~l-pr~~~II~~In~ 377 (797)
T cd04300 300 DKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLL-PRHLEIIYEINR 377 (797)
T ss_pred Cce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHC-hHHHHHHHHHHH
Confidence 466 99999988866444 44433322111 13457899999876544 35554443221 1111
Q ss_pred ----------------ccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccc
Q 007247 289 ----------------KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTG 349 (611)
Q Consensus 289 ----------------~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~ 349 (611)
...+..++.- ..+.+++-..++..|..|-.||.-..+.+++.. .+..- +.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~------P~k 447 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELY------PEK 447 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhC------CCc
Confidence 0011111110 012356666678889999999998887776520 11121 236
Q ss_pred eeEeeCCcccCCcCCCCcc--------ccccc-------------cC-c----chhhhccHHHHH----HHHHHhCCCCC
Q 007247 350 IKGIVNGMDVQEWNPLTDK--------YIGVK-------------YD-A----STVMDAKPLLKE----ALQAEVGLPVD 399 (611)
Q Consensus 350 i~vI~Ngvd~~~~~p~~~~--------~~~~~-------------~~-~----~~~~~~~~~~~~----~~~~~~gl~~~ 399 (611)
+.-+.||++...|--...+ ++... |- . ..+.+.|...|. .+++..|+..+
T Consensus 448 f~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ld 527 (797)
T cd04300 448 FNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVD 527 (797)
T ss_pred cCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 7789999999888521111 11100 11 1 123334444444 45567899889
Q ss_pred CCCcEEEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCCc------hhHHHHHHHHHH---C---CC
Q 007247 400 RNIPVIGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL---Y---PE 457 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg~d~-li~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~---~---~~ 457 (611)
++...++++-|+.++|...+ ++..+.++ ++ + +.++++.|...+ .+-+.+-.++.. . .+
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCC
Confidence 99999999999999999999 66665444 43 2 488999998653 344455555542 2 22
Q ss_pred --ceEEecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 458 --KARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 458 --~v~~~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
++.++..++..++..++.+||+....|+. |.+|..=+-+|..|.+.++|-.|...|+.++ ++|+|+||
T Consensus 608 ~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 68888899999999999999999998874 9999999999999999999999999999987 78999996
No 113
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=98.99 E-value=2.5e-08 Score=112.29 Aligned_cols=288 Identities=20% Similarity=0.237 Sum_probs=188.3
Q ss_pred CCCeEEEecCCccchHHHH-HHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccC---------CCcc
Q 007247 227 GEDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN---------LPAQ 287 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~-l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~---------~~~~ 287 (611)
.+. +||.||-|++++..- ++......|+ .....++||.|.+.+.+ .++.+.+..+- +...
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 456 899999888665444 4433322111 13457899999886544 45555443221 1111
Q ss_pred ccc--------------ccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCc---CCCcccchhhhccce
Q 007247 288 FKS--------------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGI 350 (611)
Q Consensus 288 ~~~--------------~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i 350 (611)
+.. .+..++.- ..+.+++-..++..|..|-.||+-..+.+++.. .+..- +.++
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~------P~kf 445 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEG----QSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELY------PEKF 445 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecC----CCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhC------CCcc
Confidence 111 00000100 012456666678889999999998887766310 11121 2367
Q ss_pred eEeeCCcccCCcCCCCcc---ccccc------------------c-Cc----chhhhccHHHHH----HHHHHhCCCCCC
Q 007247 351 KGIVNGMDVQEWNPLTDK---YIGVK------------------Y-DA----STVMDAKPLLKE----ALQAEVGLPVDR 400 (611)
Q Consensus 351 ~vI~Ngvd~~~~~p~~~~---~~~~~------------------~-~~----~~~~~~~~~~~~----~~~~~~gl~~~~ 400 (611)
.-+.||+....|--...+ .+..+ | +. ..+.+.|...|. .+++..|+..++
T Consensus 446 ~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp 525 (794)
T TIGR02093 446 NNKTNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDP 525 (794)
T ss_pred CCcCCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCc
Confidence 789999999888522111 11111 1 11 223333444444 355678988888
Q ss_pred CCcEEEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCCc------hhHHHHHHHHHH------CCC-
Q 007247 401 NIPVIGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE- 457 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~-li~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~------~~~- 457 (611)
+...++++-|+.++|...+ ++..+..+ ++ + +.++++.|...+ .+-+.+-.++.. ..+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~ 605 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDK 605 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCc
Confidence 9899999999999999999 66665444 33 2 668999998653 344444444432 122
Q ss_pred -ceEEecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 458 -KARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 458 -~v~~~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
+|.++..++..++..++.+||+....|+. |.+|..=+-+|..|.+.|.+-.|...|+.++ ++|+|+||
T Consensus 606 lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 606 LKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred eeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 68888999999999999999999998874 9999999999999999999999999999987 88999996
No 114
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.93 E-value=7.3e-08 Score=107.41 Aligned_cols=288 Identities=19% Similarity=0.262 Sum_probs=165.4
Q ss_pred eEEEecCCccchHH-HHHHHhccCCCC-------CCCceEEEEEecCcccc--ccCcccccccCCCc----------ccc
Q 007247 230 VVFVANDWHTSLIP-CYLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFK 289 (611)
Q Consensus 230 vivh~hd~~~~~~~-~~l~~~~~~~~~-------~~~~k~v~~iH~~~~~~--~~~~~~~~~~~~~~----------~~~ 289 (611)
++||.||-|++++. -.++.....+|+ ....-.+||.|...+.+ +|+.+.+..+ +|+ .|.
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 48999998886644 444444433333 12346899999986655 4665554322 111 110
Q ss_pred --------------cccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeC
Q 007247 290 --------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355 (611)
Q Consensus 290 --------------~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N 355 (611)
..+...+.- ....+++-..++..|..+-.||.-..+.+++.... +..+ +-+.++.-|.|
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~~----~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~--~f~~-l~P~kf~nvTN 367 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEEG----NSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFK--DFYE-LWPEKFGNVTN 367 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEETS----SSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTH--HHHH-HSGGGEEE---
T ss_pred HHHHHHhcCcchhhhhccccccc----chhhcchhHHHHHhcccccchHHHHHHHHHHHHhh--hhhh-cCCceeecccc
Confidence 001111100 11356677778889999999999988877642111 1111 12347899999
Q ss_pred CcccCCcCCCCc--------ccccccc--Ccch----------------hhhc----cHHHHHHHHHHhCCCCCCCCcEE
Q 007247 356 GMDVQEWNPLTD--------KYIGVKY--DAST----------------VMDA----KPLLKEALQAEVGLPVDRNIPVI 405 (611)
Q Consensus 356 gvd~~~~~p~~~--------~~~~~~~--~~~~----------------~~~~----~~~~~~~~~~~~gl~~~~~~~~i 405 (611)
||+...|--... +++...+ ++.. +.+. |....+.++++.|+..+++...+
T Consensus 368 GVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfd 447 (713)
T PF00343_consen 368 GVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFD 447 (713)
T ss_dssp -B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEE
T ss_pred CccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhh
Confidence 999988853211 1222111 1111 1112 22223345667788778888889
Q ss_pred EEEcCcccccCHHHH-H---HHHHhccc------CCcEEEEEeCCCc------hhHHHHHHHHH---HCC---C--ceEE
Q 007247 406 GFIGRLEEQKGSDIL-A---AAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQLEI---LYP---E--KARG 461 (611)
Q Consensus 406 l~iGrl~~~Kg~d~l-i---~a~~~l~~------~~~~lvivG~g~~------~~~~~l~~l~~---~~~---~--~v~~ 461 (611)
+++-|+.++|...+. + +-+.++++ .++++++.|...+ .+.+.+.+++. ..| + +|.+
T Consensus 448 v~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvF 527 (713)
T PF00343_consen 448 VQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVF 527 (713)
T ss_dssp EEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEE
T ss_pred hhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEe
Confidence 999999999998883 3 34444443 2689999998653 23344444443 222 2 6888
Q ss_pred ecccChHHHHHHHHHccEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEec
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 525 (611)
+..++..++..++.+||+.+..|+. |.+|..-+-+|..|.+.+++-.|...|+.++ ..|.|+||
T Consensus 528 lenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 528 LENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp ETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred ecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 9999999999999999999999875 9999999999999999999999999998764 46889996
No 115
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.83 E-value=8.5e-09 Score=106.04 Aligned_cols=321 Identities=17% Similarity=0.231 Sum_probs=177.6
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccC-cccccccCCCcccccccccccCCCCCCCCcc
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA-FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+-||-|.|+|+.+...+..+... ..+-.|||.|..-. ||+- -......+.-+ +|+......+......
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYNnLd----~f~vD~EAGkr~IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYNNLD----SFDVDKEAGKRQIYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhhchh----hcccchhhccchhHHH
Confidence 35577899999876554444322 37788999996543 3321 11111111111 1111122222222234
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
+.+++.+...|+...|||+-.+-+.. .++..+.=.+.|||.++..|...-.- + .-.+..
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAe----------HlLkRKPD~itPNGLNV~KFsA~HEF---Q--------NLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAE----------HLLKRKPDVITPNGLNVKKFSAVHEF---Q--------NLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHH----------HHHhcCCCeeCCCCcceeehhHHHHH---H--------HHHHHH
Confidence 56677788888999999987654433 23333445667999999877543110 0 011122
Q ss_pred HHHHHHH-----hC-CCCCC-CCcEEEEEcCcc-cccCHHHHHHHHHhccc------CC---cEEEEEeCCC--------
Q 007247 387 KEALQAE-----VG-LPVDR-NIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTGK-------- 441 (611)
Q Consensus 387 ~~~~~~~-----~g-l~~~~-~~~~il~iGrl~-~~Kg~d~li~a~~~l~~------~~---~~lvivG~g~-------- 441 (611)
++.+++. +| +.-|= +...++..||.+ ..||-|++|+++++|.- .+ +-|+|.-...
T Consensus 302 KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesL 381 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESL 381 (692)
T ss_pred HHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhh
Confidence 3333321 22 22222 334566679998 59999999999999842 11 2233332210
Q ss_pred ------chh---------------------------HHH--------HHH----HHH-HCC-------------------
Q 007247 442 ------KPM---------------------------EKQ--------LEQ----LEI-LYP------------------- 456 (611)
Q Consensus 442 ------~~~---------------------------~~~--------l~~----l~~-~~~------------------- 456 (611)
+.+ .+. +++ +.. .+|
T Consensus 382 kgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~i 461 (692)
T KOG3742|consen 382 KGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSI 461 (692)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHh
Confidence 000 000 000 000 000
Q ss_pred ------------CceEEecccCh-------HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc----c
Q 007247 457 ------------EKARGVAKFNI-------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV----D 513 (611)
Q Consensus 457 ------------~~v~~~~~~~~-------~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~----e 513 (611)
.++.++..|.. -+..++.++|.+.++||.+|++|.+..|.--+|+|.|+++.+|+. |
T Consensus 462 Rr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMee 541 (692)
T KOG3742|consen 462 RRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEE 541 (692)
T ss_pred HhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHH
Confidence 12233333311 123368899999999999999999999999999999999988754 4
Q ss_pred ceecC-cceEEecccccccc-cCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHH----HHhhCCchHHHHHHHHHHHHHH
Q 007247 514 TVEEG-FTGFQMGSFSVDCE-AVDPVDVAAVSTTVRRALATYGTQALAEMMKNG----MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 514 ~v~~g-~~G~l~~~~~~~~~-~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~----~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
.|++. ..|+.+ +|-- .-..++++++++-|...... .+++++.++. ...-++|+.+...|.+.=.-.+
T Consensus 542 hi~d~~ayGIYI----vDRRfks~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 542 HIEDPQAYGIYI----VDRRFKSPDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HhcCchhceEEE----EecccCChhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 44432 234433 1100 11344567888888877764 3444443332 4577899999988877655444
No 116
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.72 E-value=3.2e-07 Score=86.88 Aligned_cols=182 Identities=18% Similarity=0.205 Sum_probs=110.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
.||++|++-=-| ...||.++++.+|+..|+++||+|+|.|........ ....+|++.
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~----------------------~~~y~gv~l 58 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK----------------------EFEYNGVRL 58 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC----------------------CcccCCeEE
Confidence 379999987567 379999999999999999999999999976221111 112357777
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCc-cchHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 243 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~-~~~~~ 243 (611)
+.+..|..- ....+.+...++..++.....+ ..+.| ||+.+... .+++.
T Consensus 59 ~~i~~~~~g----------------------~~~si~yd~~sl~~al~~~~~~-------~~~~~-ii~ilg~~~g~~~~ 108 (185)
T PF09314_consen 59 VYIPAPKNG----------------------SAESIIYDFLSLLHALRFIKQD-------KIKYD-IILILGYGIGPFFL 108 (185)
T ss_pred EEeCCCCCC----------------------chHHHHHHHHHHHHHHHHHhhc-------cccCC-EEEEEcCCccHHHH
Confidence 766544211 0112222333444444322110 12478 88888766 34444
Q ss_pred HHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchh-HhHHHhhhccEEEe
Q 007247 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVLT 322 (611)
Q Consensus 244 ~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~ad~vi~ 322 (611)
.+++.... .+.|+++.+|.+.+.- -.+... ..+.+. -++.+.+.+|.+|+
T Consensus 109 ~~~r~~~~-----~g~~v~vN~DGlEWkR---------~KW~~~---------------~k~~lk~~E~~avk~ad~lIa 159 (185)
T PF09314_consen 109 PFLRKLRK-----KGGKVVVNMDGLEWKR---------AKWGRP---------------AKKYLKFSEKLAVKYADRLIA 159 (185)
T ss_pred HHHHhhhh-----cCCcEEECCCcchhhh---------hhcCHH---------------HHHHHHHHHHHHHHhCCEEEE
Confidence 44444321 3679999999765411 001000 001112 22456789999999
Q ss_pred cCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcc
Q 007247 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 358 (611)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 358 (611)
.|+...+.+.+ .|+- .+.+.|++|.|
T Consensus 160 Ds~~I~~y~~~--~y~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 160 DSKGIQDYIKE--RYGR--------KKSTFIAYGAD 185 (185)
T ss_pred cCHHHHHHHHH--HcCC--------CCcEEecCCCC
Confidence 99999999986 3441 26788999976
No 117
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.69 E-value=4.3e-06 Score=89.08 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=127.4
Q ss_pred hhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeC-CcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
+-||..++.++..++.+.+ .|.+.. +|.++-| ++|.-.+... ..++.+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~-------------------~~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDL-------------------LSKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhc-------------------cCHHHHHHH
Confidence 3568889999999998875 565533 6666655 4553322111 014566778
Q ss_pred hCCCCCCCCcEEEEEcCcc--cc---cCHHHHHHHHHhcccCCcEEEEE-e-CCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 394 VGLPVDRNIPVIGFIGRLE--EQ---KGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~--~~---Kg~d~li~a~~~l~~~~~~lviv-G-~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
+|++.+ ...+++.+-+-+ .. +.+..+++++.++ ..++.++.- + .+.....+.++++... ..++.......
T Consensus 195 lgl~~~-~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDLD-KPYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLG 271 (365)
T ss_pred hCCCCC-CCEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCC
Confidence 887532 223334443322 22 3355555555554 124433221 2 2222345556555322 23587787778
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
......+++.||+++--|. |.. .||.++|+|+|+ .+.-+|.+..|.+.+++ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNSS----SGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CCCHHHHHHHH
Confidence 8888889999999994442 333 899999999995 45678888778787764 46899999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 007247 547 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 582 (611)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 582 (611)
.++++ +..+..+ ......|-....++++.++
T Consensus 334 ~~~~~---~~~~~~~--~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 334 EKLLD---PAFKKSL--KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHhC---hHHHHHH--hhCCCCCCCChHHHHHHHh
Confidence 99543 2222222 1112346555666766654
No 118
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.59 E-value=1.1e-05 Score=83.70 Aligned_cols=258 Identities=16% Similarity=0.080 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH--HHHHhccCCCCCCCceEEEEEecCcccccc
Q 007247 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC--YLKTMYKPKGMYKSAKVVFCIHNIAYQGRF 274 (611)
Q Consensus 197 ~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~--~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~ 274 (611)
..++..+.+...++.+.+..+ +|| ++.+-|.+...+.. .+++.. +++|+|+.+--.
T Consensus 64 L~~lp~llk~~~~~~~~i~~~---------kpD-~~i~IDsPdFnl~vak~lrk~~------p~i~iihYV~Ps------ 121 (381)
T COG0763 64 LGRLPRLLKIRRELVRYILAN---------KPD-VLILIDSPDFNLRVAKKLRKAG------PKIKIIHYVSPS------ 121 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---------CCC-EEEEeCCCCCchHHHHHHHHhC------CCCCeEEEECcc------
Confidence 334455566666666664433 699 56666766544443 344332 568887776511
Q ss_pred CcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEee
Q 007247 275 AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 354 (611)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ 354 (611)
.| .|+. .......+.+|+++++=|...+.+.. +|. .++.|-
T Consensus 122 ------------VW--------------AWr~-~Ra~~i~~~~D~lLailPFE~~~y~k---~g~---------~~~yVG 162 (381)
T COG0763 122 ------------VW--------------AWRP-KRAVKIAKYVDHLLAILPFEPAFYDK---FGL---------PCTYVG 162 (381)
T ss_pred ------------ee--------------eech-hhHHHHHHHhhHeeeecCCCHHHHHh---cCC---------CeEEeC
Confidence 11 1111 12334566899999999999988875 343 234444
Q ss_pred CCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEcC-ccc-ccCHHHHHHHHHhccc--
Q 007247 355 NGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK-- 429 (611)
Q Consensus 355 Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~il~iGr-l~~-~Kg~d~li~a~~~l~~-- 429 (611)
+.+ |.-.+.+ +++..++++|++.+. +.+.+..|. -.+ .+-...+.+|+++++.
T Consensus 163 Hpl~d~i~~~~---------------------~r~~ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~ 220 (381)
T COG0763 163 HPLADEIPLLP---------------------DREAAREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQELKARY 220 (381)
T ss_pred Chhhhhccccc---------------------cHHHHHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHHHhhC
Confidence 433 2211222 256689999998654 344455554 444 5567889999999985
Q ss_pred CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-C
Q 007247 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-T 508 (611)
Q Consensus 430 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~ 508 (611)
++.++++--... .++...++.. +... ........+...++.+..||+.+..| |.+.+|+|.+|+|.|++- .
T Consensus 221 ~~~~~vlp~~~~-~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~ 292 (381)
T COG0763 221 PDLKFVLPLVNA-KYRRIIEEAL-KWEV-AGLSLILIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKV 292 (381)
T ss_pred CCceEEEecCcH-HHHHHHHHHh-hccc-cCceEEecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEec
Confidence 789988765443 2333333332 2221 11222334445667999999988665 899999999999987763 3
Q ss_pred cc----------------cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 509 GG----------------LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 509 gg----------------~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
.. ++.++-+. .+++.+-. +.-.++.+++++..++.+.
T Consensus 293 ~~it~~iak~lvk~~yisLpNIi~~~---~ivPEliq-----~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 293 KPITYFIAKRLVKLPYVSLPNILAGR---EIVPELIQ-----EDCTPENLARALEELLLNG 345 (381)
T ss_pred cHHHHHHHHHhccCCcccchHHhcCC---ccchHHHh-----hhcCHHHHHHHHHHHhcCh
Confidence 32 22222211 11111101 3345889999999999883
No 119
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.57 E-value=1e-05 Score=84.39 Aligned_cols=295 Identities=17% Similarity=0.173 Sum_probs=160.6
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccccCCCceEEEEEeCCeeeEEEEEEeeecCceE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (611)
|||++=-.+ +| .-.+...+..+|.++||+|.|.+..++...+-.+ .-|++.
T Consensus 1 MkIwiDi~~-p~------hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~----------------------~yg~~y 51 (335)
T PF04007_consen 1 MKIWIDITH-PA------HVHFFKNIIRELEKRGHEVLITARDKDETEELLD----------------------LYGIDY 51 (335)
T ss_pred CeEEEECCC-ch------HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHH----------------------HcCCCe
Confidence 888887654 34 3558889999999999999999988765433211 113333
Q ss_pred EEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecCCccchHHH
Q 007247 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (611)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd~~~~~~~~ 244 (611)
..+- +.+..++ .+.........++.+.... ++|| ++.++....+....
T Consensus 52 ~~iG----------~~g~~~~------------~Kl~~~~~R~~~l~~~~~~---------~~pD-v~is~~s~~a~~va 99 (335)
T PF04007_consen 52 IVIG----------KHGDSLY------------GKLLESIERQYKLLKLIKK---------FKPD-VAISFGSPEAARVA 99 (335)
T ss_pred EEEc----------CCCCCHH------------HHHHHHHHHHHHHHHHHHh---------hCCC-EEEecCcHHHHHHH
Confidence 3331 1111111 1222233333444443321 3799 55554322222111
Q ss_pred HHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcchhHhHHHhhhccEEEecC
Q 007247 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (611)
Q Consensus 245 ~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (611)
++ .++|.|....+..- . ...+..+.-||.++++.
T Consensus 100 ~~----------lgiP~I~f~D~e~a-~-----------------------------------~~~~Lt~Pla~~i~~P~ 133 (335)
T PF04007_consen 100 FG----------LGIPSIVFNDTEHA-I-----------------------------------AQNRLTLPLADVIITPE 133 (335)
T ss_pred HH----------hCCCeEEEecCchh-h-----------------------------------ccceeehhcCCeeECCc
Confidence 11 38898888774210 0 00111344689999887
Q ss_pred HHHHHHHHcCcCCCcccchhhhccceeEe-eCCcccCC----cCCCCccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007247 325 PHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (611)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI-~Ngvd~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 399 (611)
-.-...+.. +|.+ + .+. +||++.-. |.| ...+.+++|+.
T Consensus 134 ~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P----------------------d~~vl~~lg~~-- 177 (335)
T PF04007_consen 134 AIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP----------------------DPEVLKELGLD-- 177 (335)
T ss_pred ccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC----------------------ChhHHHHcCCC--
Confidence 655544443 4433 2 234 67776533 333 34578888965
Q ss_pred CCCcEEEEEcCcccccC------HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHH
Q 007247 400 RNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (611)
Q Consensus 400 ~~~~~il~iGrl~~~Kg------~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (611)
+.+.|+. |.++.+- -.++-+.+++|.+..-.++++-...+. ..+.++++ +.. .. ..-..+.+
T Consensus 178 -~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-----~~~~~~~~--~~i-~~-~~vd~~~L 245 (335)
T PF04007_consen 178 -DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-----RELFEKYG--VII-PP-EPVDGLDL 245 (335)
T ss_pred -CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-----hhHHhccC--ccc-cC-CCCCHHHH
Confidence 2244443 5444322 233556666665533336666544321 12223332 111 11 11123369
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc---cccceecCcceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
+..||+++- +-|....||...|+|.|.+..|- .-+.+.+ .|+++ ...|++++.+.+...+
T Consensus 246 l~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 246 LYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTDPDEIVEYVRKNL 308 (335)
T ss_pred HHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCCHHHHHHHHHHhh
Confidence 999999993 34688999999999999976542 2233333 46766 7789999998776655
Q ss_pred H
Q 007247 551 A 551 (611)
Q Consensus 551 ~ 551 (611)
.
T Consensus 309 ~ 309 (335)
T PF04007_consen 309 G 309 (335)
T ss_pred h
Confidence 4
No 120
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.53 E-value=2.8e-05 Score=83.87 Aligned_cols=124 Identities=19% Similarity=0.179 Sum_probs=80.0
Q ss_pred CCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEE-EEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 401 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 401 ~~~~il~iGrl~~---~Kg~d~li~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
+.++++..|.... .+-...+++++..+ +.+++ .+|..... . ...++++......+. ..++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~---~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPH---DWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCH---HHHhhh
Confidence 3457778888754 34455666666665 45544 45543311 1 234556765554432 257999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCcc--CHHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~i~~ll 550 (611)
||++|.- +-..++.||+++|+|+|+....+ ..+.+.+.+.|... +.. +.+++++++.+++
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 9999932 23488999999999999987654 23344455567654 333 7899999999999
Q ss_pred Hh
Q 007247 551 AT 552 (611)
Q Consensus 551 ~~ 552 (611)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 85
No 121
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.48 E-value=3.3e-05 Score=81.56 Aligned_cols=271 Identities=15% Similarity=0.127 Sum_probs=145.1
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCCcc
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
+||+|++.-|-.+.++++..... .++| |.++|. |.-..+ . ..+.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~Hiea----GlRs~d-~-~~g~~d-------------------- 112 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEA----GLRSGD-R-TEGMPD-------------------- 112 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES---------S--T-TSSTTH--------------------
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecC----CCCccc-c-CCCCch--------------------
Confidence 69966655566667776666654 4899 555663 110000 0 001111
Q ss_pred hhHhHHHhh-hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCC-cccCCcCCCCccccccccCcchhhhccH
Q 007247 307 INWMKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (611)
Q Consensus 307 ~~~~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (611)
...|..+. -||..++.++..++.+.+ .|.+.+ +|.++-|- +|.-... +.
T Consensus 113 -e~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~-------------------~~ 163 (346)
T PF02350_consen 113 -EINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQN-------------------KE 163 (346)
T ss_dssp -HHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHH-------------------HH
T ss_pred -hhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHh-------------------HH
Confidence 23344443 689999999999999997 677655 78777653 3321100 00
Q ss_pred HHHHHH-HHHhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCce
Q 007247 385 LLKEAL-QAEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (611)
Q Consensus 385 ~~~~~~-~~~~gl~~~~~~~~il~iGrl~~---~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (611)
...+.+ ...+... ..+..+++..=|.+. ......+.++++.|.+ +++++++.....+.....+.+...++ .++
T Consensus 164 ~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v 241 (346)
T PF02350_consen 164 EIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNV 241 (346)
T ss_dssp TTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTE
T ss_pred HHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCE
Confidence 000001 1111001 123334444433332 3345677777777766 58999998886666677776666666 478
Q ss_pred EEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CcccccceecCcceEEecccccccccCCccC
Q 007247 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 460 ~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d 538 (611)
..+..........+++.|+++|--| |-++-||..+|+|+|.-+ .|--.+.+..+.+-+ + ..|
T Consensus 242 ~~~~~l~~~~~l~ll~~a~~vvgdS-----sGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v-----------~~~ 304 (346)
T PF02350_consen 242 RLIEPLGYEEYLSLLKNADLVVGDS-----SGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V-----------GTD 304 (346)
T ss_dssp EEE----HHHHHHHHHHESEEEESS-----HHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E-----------TSS
T ss_pred EEECCCCHHHHHHHHhcceEEEEcC-----ccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e-----------CCC
Confidence 8888888877778999999998443 544559999999999985 455566666565544 5 389
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (611)
.+++.++|.+++.+ ...+.++.. ....|.-...++++.+++
T Consensus 305 ~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 305 PEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhh
Confidence 99999999999986 344433321 123565566677766665
No 122
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.45 E-value=5.7e-05 Score=79.90 Aligned_cols=192 Identities=19% Similarity=0.184 Sum_probs=117.6
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 389 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (611)
.+..-+.+|.++++=|...+.+.+ +|+ +++.+-|.+= +...+..+ ...
T Consensus 127 ~~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~~-------------------~~~ 174 (373)
T PF02684_consen 127 AKKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEPD-------------------RAE 174 (373)
T ss_pred HHHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCCC-------------------HHH
Confidence 344456789999999999998886 443 3555555431 11111110 334
Q ss_pred HHHHhCCCCCCCCcE-EEEEc-Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 390 LQAEVGLPVDRNIPV-IGFIG-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~-il~iG-rl~~-~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
.++.+ ++. +.++ .+..| |-.+ .+....++++++++.+ +++++++..... ...+.+++.....+.++.....
T Consensus 175 ~~~~~-l~~--~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~~ 250 (373)
T PF02684_consen 175 AREKL-LDP--DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVII 250 (373)
T ss_pred HHHhc-CCC--CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEEc
Confidence 45555 554 3344 34444 4555 4556999999999986 789998876543 3455566655554433332221
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcc----------------cccceecCcceEEeccc
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGG----------------LVDTVEEGFTGFQMGSF 527 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg----------------~~e~v~~g~~G~l~~~~ 527 (611)
. ......++.||+.+..| |.+-+|++.+|+|.|+. ..+. ++.++-+.. +++.+
T Consensus 251 -~-~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~---v~PEl 320 (373)
T PF02684_consen 251 -E-GESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE---VVPEL 320 (373)
T ss_pred -C-CchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC---cchhh
Confidence 2 23446899999999776 79999999999997665 3442 233222211 11111
Q ss_pred ccccccCCccCHHHHHHHHHHHHHh
Q 007247 528 SVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 528 ~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
- -+..+++.+++++..+++|
T Consensus 321 i-----Q~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 321 I-----QEDATPENIAAELLELLEN 340 (373)
T ss_pred h-----cccCCHHHHHHHHHHHhcC
Confidence 1 1466899999999999998
No 123
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.44 E-value=6.3e-05 Score=81.00 Aligned_cols=209 Identities=16% Similarity=0.111 Sum_probs=119.8
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHH
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (611)
-+.||.|++..+...+.+.+ +|+ ++..+-|.+=.... +.. +
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~l~-~~~--------------------~------ 198 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDGLE-PPE--------------------R------ 198 (396)
T ss_pred chhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhcCc-ccc--------------------c------
Confidence 35799999999998888874 332 45566665421111 100 0
Q ss_pred hCCCCCCCCcEEEEEcCc--ccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCC-------------
Q 007247 394 VGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE------------- 457 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl--~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~------------- 457 (611)
.+++.+ ...++++.|.- +..+++..++++++++.+ +++++++.-.+.... +.+++.....+-
T Consensus 199 ~~l~~~-~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 199 KPLLTG-RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTSLF 276 (396)
T ss_pred cccCCC-CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccchhh
Confidence 033222 22344555554 235678899999999965 578876654233223 223332222111
Q ss_pred ---ceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc---cceec-----CcceEEecc
Q 007247 458 ---KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEE-----GFTGFQMGS 526 (611)
Q Consensus 458 ---~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~v~~-----g~~G~l~~~ 526 (611)
.+... .+. .....+++.||++|..| |.+..|++++|+|+|.....+.. .+.+. + ..+.
T Consensus 277 ~~~~~~v~-~~~-~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~--- 345 (396)
T TIGR03492 277 QKGTLEVL-LGR-GAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVF--- 345 (396)
T ss_pred ccCceEEE-ech-HhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEe---
Confidence 12222 222 33567999999999774 56779999999999998743321 11121 2 2222
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
+...+++.+++++.++++| ++.+.+|.++. .+.+.-...+++..+++.
T Consensus 346 -------l~~~~~~~l~~~l~~ll~d--~~~~~~~~~~~-~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 346 -------LASKNPEQAAQVVRQLLAD--PELLERCRRNG-QERMGPPGASARIAESIL 393 (396)
T ss_pred -------cCCCCHHHHHHHHHHHHcC--HHHHHHHHHHH-HHhcCCCCHHHHHHHHHH
Confidence 2567789999999999987 66666666322 233333344444444433
No 124
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.41 E-value=2.7e-05 Score=81.10 Aligned_cols=119 Identities=19% Similarity=0.260 Sum_probs=80.4
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
...+++++|..... .++++++++ ++.+++++|.... .....++. +..|..+...++|+.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~----------~~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAA----------DPRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCcc----------cccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44688999998776 667888886 5788989976531 11134565 4456656677899999999
Q ss_pred EeCCCCCCCcHH-HHHHHHcCCceEEcCCcccccc------eecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 481 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVDT------VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 481 l~pS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e~------v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
|.- .|.. +.||+++|+|+|+-...+..|. +++.+.|..+ -.+.-+++.+.+.|+++
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 954 3444 9999999999999887654443 3334445543 01244678888877653
No 125
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.36 E-value=5.4e-06 Score=75.19 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=28.1
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
|||+|+... ..++..++.+|.++||+|.++++..
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~ 34 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRN 34 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 689998753 2367899999999999999999863
No 126
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.33 E-value=5.3e-05 Score=77.65 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=69.3
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEE-EEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
.++++.|..++.+....+++++.++. .++++ +|+|.+.+ ..+.++++....+ ++... . ..+.+..+|+.||+++
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~~-~-~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIILF-I-DVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEEE-e-CHHHHHHHHHHCCEEE
Confidence 47888998888777788889988764 33443 46777654 3455666666554 45533 3 3345667999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~ 508 (611)
.+ .|.++.|++++|+|+|+-..
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 73 67999999999999998654
No 127
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.26 E-value=0.00024 Score=78.66 Aligned_cols=205 Identities=14% Similarity=0.111 Sum_probs=117.8
Q ss_pred hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 310 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
.+..-+..|+++|+=|...+.+.+ +|+ +++.+-|.+ |. ..+.. .++
T Consensus 355 ikki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~~ 401 (608)
T PRK01021 355 KTILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PNL 401 (608)
T ss_pred HHHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CHH
Confidence 344556789999999999988875 444 345555543 32 11111 145
Q ss_pred HHHHHhCCCCCCCCcEEEEEc-Cccc-ccCHHHHHHHHH--hcccCCcEEEEEeCCCchhHHHHHHHHHHCC-CceEEec
Q 007247 389 ALQAEVGLPVDRNIPVIGFIG-RLEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVA 463 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iG-rl~~-~Kg~d~li~a~~--~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~ 463 (611)
+.++++|++.+. ..+.+..| |-.+ .+....+++|++ ++. ++.++++... +....+.+++.....+ ..+...
T Consensus 402 ~~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a-~~~~~~~i~~~~~~~~~~~~~ii- 477 (608)
T PRK01021 402 SWKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSA-NPKYDHLILEVLQQEGCLHSHIV- 477 (608)
T ss_pred HHHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecC-chhhHHHHHHHHhhcCCCCeEEe-
Confidence 668888986432 23335555 4545 567889999998 654 3688877543 3334455555543322 112211
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccceecC-------cce---EEecccccccc
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-------FTG---FQMGSFSVDCE 532 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-------~~G---~l~~~~~~~~~ 532 (611)
.+....++++.||+.+..| |.+-+|++.+|+|.|+. ..+.+.-.+... .-| ++.| -.+-.+
T Consensus 478 --~~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIag-r~VvPE 549 (608)
T PRK01021 478 --PSQFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILG-STIFPE 549 (608)
T ss_pred --cCcchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcC-CCcchh
Confidence 1112357999999999776 79999999999997774 344222211000 000 0000 011133
Q ss_pred cC---CccCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007247 533 AV---DPVDVAAVSTTVRRALATYGTQALAEMM 562 (611)
Q Consensus 533 ~v---~~~d~~~la~~i~~ll~~~~~~~~~~~~ 562 (611)
++ +..+++.+++++ +++.| ++.++++.
T Consensus 550 llqgQ~~~tpe~La~~l-~lL~d--~~~r~~~~ 579 (608)
T PRK01021 550 FIGGKKDFQPEEVAAAL-DILKT--SQSKEKQK 579 (608)
T ss_pred hcCCcccCCHHHHHHHH-HHhcC--HHHHHHHH
Confidence 44 466899999996 77776 44444443
No 128
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.25 E-value=0.0033 Score=65.67 Aligned_cols=223 Identities=17% Similarity=0.120 Sum_probs=141.3
Q ss_pred hccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCc-ccCCcCCCCccccccccCcchhhhccHHHHHHHHHH-
Q 007247 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE- 393 (611)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 393 (611)
-||.-++.++..++.+.+ .|++.+ +|.++-|-+ |.-.+.- .+..........
T Consensus 145 ~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~-----------------~~~~~~~~~~~~~ 198 (383)
T COG0381 145 LSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTR-----------------DRVLEDSKILAKG 198 (383)
T ss_pred hhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHH-----------------hhhccchhhHHhh
Confidence 588999999999999986 676644 788887754 2111110 000011112222
Q ss_pred hCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHH
Q 007247 394 VGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (611)
Q Consensus 394 ~gl~~~~~~~~il~iGrl~~~-Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (611)
++. ..++..++..=|-+.. +++..+++++.++.+ +++.++.-=...+...+.. ....+...++..+-.+.....
T Consensus 199 ~~~--~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~~f 275 (383)
T COG0381 199 LDD--KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYLDF 275 (383)
T ss_pred hcc--ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchHHH
Confidence 222 1233455556665544 888999998888876 4676665443332222222 222222345777777888778
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-cccccceecCcceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
..++..|-+++-- .|-.+=||-..|+||++-+. ..-+|.++.| +-.++ ..|.+.+.+++..+
T Consensus 276 ~~L~~~a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lv-----------g~~~~~i~~~~~~l 338 (383)
T COG0381 276 HNLMKNAFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILV-----------GTDEENILDAATEL 338 (383)
T ss_pred HHHHHhceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEe-----------CccHHHHHHHHHHH
Confidence 8899999766633 47889999999999999874 4456666544 44543 46779999999999
Q ss_pred HHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 550 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 550 l~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+++ ++.+++|+.. ...|.-....+++.+++.+-..
T Consensus 339 l~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~~ 373 (383)
T COG0381 339 LED--EEFYERMSNA--KNPYGDGNASERIVEILLNYFD 373 (383)
T ss_pred hhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHhh
Confidence 998 6666666553 3556666677777777765543
No 129
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.02 E-value=0.0018 Score=71.96 Aligned_cols=125 Identities=10% Similarity=-0.010 Sum_probs=79.2
Q ss_pred CcEEEEEcCccc-----ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH--
Q 007247 402 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-- 474 (611)
Q Consensus 402 ~~~il~iGrl~~-----~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~-- 474 (611)
.++++..|.... .+-...+++|++++ +.++++..++.. . . ...|+++.....++.. .++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~-~------~~~p~Nv~i~~w~Pq~---~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-E-A------INLPANVLTQKWFPQR---AVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-C-c------ccCCCceEEecCCCHH---HHhcC
Confidence 356777888643 23356667777766 457777665431 1 1 2346677765555543 467
Q ss_pred HHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHH
Q 007247 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll 550 (611)
..++++|. + |-..++.||+.+|+|+|+-...+ ....+.+.+.|.... ...-+.+++.++|.+++
T Consensus 363 p~v~~fIt--H--GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~--------~~~~t~~~l~~ai~~vl 430 (507)
T PHA03392 363 KNVKAFVT--Q--GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALD--------TVTVSAAQLVLAIVDVI 430 (507)
T ss_pred CCCCEEEe--c--CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEec--------cCCcCHHHHHHHHHHHh
Confidence 45777772 2 33468999999999999976543 333444556777540 02236799999999999
Q ss_pred Hh
Q 007247 551 AT 552 (611)
Q Consensus 551 ~~ 552 (611)
++
T Consensus 431 ~~ 432 (507)
T PHA03392 431 EN 432 (507)
T ss_pred CC
Confidence 87
No 130
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.97 E-value=0.0027 Score=66.90 Aligned_cols=211 Identities=18% Similarity=0.128 Sum_probs=133.3
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHH
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (611)
-.+.+..++..|.|++-|+..++.+.+ .|.. ++.+.-| ........ ......
T Consensus 168 ~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~ 219 (419)
T COG1519 168 KFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAE 219 (419)
T ss_pred HHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHH
Confidence 355677788999999999999999997 5654 3333333 22111111 112233
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 387 ~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
...++..++.+ +++++..+. ....-++++++++.+++ +|..++++=. +++--+.++++....+-.+...-.
T Consensus 220 ~~~~r~~l~~~----r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPR-HpERf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 220 LAALRRQLGGH----RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPR-HPERFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred HHHHHHhcCCC----CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecC-ChhhHHHHHHHHHHcCCeEEeecC
Confidence 55677776643 467888887 33334668899999987 5777777654 444556666666655322211110
Q ss_pred ----cC---------hHHHHHHHHHccEEEeCC-CCCCCcHHHHHHHHcCCceEEcC-Cccccc---ceecCcceEEecc
Q 007247 465 ----FN---------IPLAHMIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVAS-TGGLVD---TVEEGFTGFQMGS 526 (611)
Q Consensus 465 ----~~---------~~~~~~i~~~aDv~l~pS-~~E~~gl~~lEAma~G~PvI~s~-~gg~~e---~v~~g~~G~l~~~ 526 (611)
+. --++..+|.-||+.++-- ..+--|--++|+.++|+|||.-. +-...| -+...+.|+.+
T Consensus 293 ~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-- 370 (419)
T COG1519 293 GDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-- 370 (419)
T ss_pred CCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE--
Confidence 00 012446999999977754 44444667999999999999865 333333 33344456654
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
.|.+.+++.+..++.+ +..+.+|++++.
T Consensus 371 ----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~ 398 (419)
T COG1519 371 ----------EDADLLAKAVELLLAD--EDKREAYGRAGL 398 (419)
T ss_pred ----------CCHHHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 5688888888888876 777777777764
No 131
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.88 E-value=0.00047 Score=74.53 Aligned_cols=178 Identities=16% Similarity=0.064 Sum_probs=103.9
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCCchhHHHHHHHHHHCC---CceEEecc
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAK 464 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~ 464 (611)
.|+++|||.+ .+++++..++ .|=.+..++++.++.+ |+..|++..... ..++.+++...+.+ +++.+...
T Consensus 275 ~R~~~gLp~d--~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~ 349 (468)
T PF13844_consen 275 TRAQYGLPED--AVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPV 349 (468)
T ss_dssp ETGGGT--SS--SEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE-
T ss_pred CHHHcCCCCC--ceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCC
Confidence 3678899854 4666666665 4555777777777766 899998876543 24556666655554 46766554
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec------CcceEEecccccccccCCccC
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~~v~~~d 538 (611)
-+.+..-..++.+|++|=+..+ +-+.+.+||+.+|+|||+-....+..-+.- |-..+ -..|
T Consensus 350 ~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El------------IA~s 416 (468)
T PF13844_consen 350 APREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL------------IADS 416 (468)
T ss_dssp --HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG------------B-SS
T ss_pred CCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh------------cCCC
Confidence 4444333577889999977544 337899999999999999764433322211 11112 2467
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH---H--HhhCCchHHHHHHHHHHHHHH
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~~~~l~ 587 (611)
.+++++...++.+| ++.+.++.++- + ..-|+-...++++++.|+.+.
T Consensus 417 ~~eYv~~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 417 EEEYVEIAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 89999999999888 55544444333 2 245888899999999998763
No 132
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.85 E-value=0.0018 Score=65.10 Aligned_cols=210 Identities=17% Similarity=0.199 Sum_probs=119.6
Q ss_pred HhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHH
Q 007247 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (611)
.+.-||.+++++....+.+.. +|.++.++..-..+.-+. +...|.|. .++.+
T Consensus 123 ~~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~---~v~~f~pd----------------------~evlk 174 (346)
T COG1817 123 TLPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELA---NVYGFVPD----------------------PEVLK 174 (346)
T ss_pred chhhhhheecccccchHHHHH---hCCCccceecccceeEEe---ecccCCCC----------------------HHHHH
Confidence 456799999999988887774 676655333212222222 22224443 35788
Q ss_pred HhCCCCCCCCcEEEE-E-----cCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 393 EVGLPVDRNIPVIGF-I-----GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 393 ~~gl~~~~~~~~il~-i-----Grl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
++|+..+ + +.|++ . .-....++.+.+.++++.|.+.. .+++-... ..++.-+.+.+.+ ...-.
T Consensus 175 eLgl~~~-~-~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-----~~~eife~~~n~i--~pk~~ 243 (346)
T COG1817 175 ELGLEEG-E-TYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-----EQAEIFEGYRNII--IPKKA 243 (346)
T ss_pred HcCCCCC-C-ceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-----hHHHHHhhhcccc--CCccc
Confidence 9999864 2 33332 1 12345778888899999986544 45544322 2223333332211 11111
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc---ccccceecCcceEEecccccccccCCccCHHHHH
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 543 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la 543 (611)
.+.+ .++-.|++++ .+-|.-.-||...|+|.|++.-| +..+... +.|.++ ...|+.+..
T Consensus 244 vD~l-~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~----------~s~~~~~~~ 305 (346)
T COG1817 244 VDTL-SLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY----------HSTDEIAIV 305 (346)
T ss_pred ccHH-HHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee----------ecCCHHHHH
Confidence 1212 4777888887 34577889999999999999844 2333333 357766 667887887
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 544 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 544 ~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
+.+.+.+.+. .. ++. .....+.+.+..+++.+.++.
T Consensus 306 ~~a~~~l~~~--~~-kK~------~~~k~e~~~~~ii~~ve~~~e 341 (346)
T COG1817 306 EYAVRNLKYR--RL-KKT------GVLKLEDPTRLIIDVVEEMLE 341 (346)
T ss_pred HHHHHHhhch--hh-ccc------cccccccHHHHHHHHHHHHhh
Confidence 7877777652 11 111 112345555555665555554
No 133
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.78 E-value=0.0023 Score=66.92 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=72.3
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
.++++.|. -+...+++++.++ +++.+++ |..+. .. ..+++++... .+..+.+..++..||+++.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 35566544 2456677777666 3555544 43221 11 1234556655 4544456679999999997
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCccccc------ceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
-+-+ .++.||+++|+|+|.....+..| .+.+.+.|... +..+. ++.+++...+++
T Consensus 254 ~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 254 HGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 6632 46999999999999988766444 34455667764 66666 444444444443
No 134
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.49 E-value=0.0084 Score=60.93 Aligned_cols=165 Identities=16% Similarity=0.120 Sum_probs=110.1
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeC--CCchhHHHHHHHHHHC-C-CceEEeccc-ChHHHHHHHH
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 475 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~i~~ 475 (611)
+.+|+.-.+-++.-++..+++++.+....++++++ .|- |++.|.+++++.+.++ + +++.....+ +-++..++++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 34455444567888899999999888778888766 454 6778888888888764 4 566655544 4455668999
Q ss_pred HccEEEeCCC-CCCCcHHHHHHHHcCCceEEcC-CcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 476 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 476 ~aDv~l~pS~-~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
.||+.++.-. .++.|+.++ .+..|+||+.++ +.-..++.+.+..- +| . -+.-|...+.++=+++.
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv~V-lf---~-----~d~L~~~~v~e~~rql~--- 292 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGLPV-LF---T-----GDDLDEDIVREAQRQLA--- 292 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCCeE-Ee---c-----CCcccHHHHHHHHHHHH---
Confidence 9999998774 589998877 799999998885 56667766655433 23 0 02222222222111111
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007247 554 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 554 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
..-++.+. |+-++..+.|.++|+.+.
T Consensus 293 ------~~dk~~I~--Ff~pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 293 ------SVDKNIIA--FFSPNYLQGWRNALAIAA 318 (322)
T ss_pred ------hhCcceee--ecCHhHHHHHHHHHHHhh
Confidence 11112222 999999999999998764
No 135
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.35 E-value=0.036 Score=58.39 Aligned_cols=91 Identities=20% Similarity=0.119 Sum_probs=59.2
Q ss_pred cEEEEEcCcc-c-ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 403 PVIGFIGRLE-E-QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 403 ~~il~iGrl~-~-~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.+.++.|.-. + .+-...+++++.++.+...++++.|... . +.+++...+.. .+... . ....+++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~---~--~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS---Y--DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe---c--cHHHHHHhhhHH
Confidence 3455556542 2 4566778899999876557788877654 2 44444333222 12222 1 234689999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
+..| |.+-+|++.+|+|.|+.-
T Consensus 240 l~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 240 FICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred HhcC-----cHHHHHHHHhCCCEEEEE
Confidence 8765 788889999999987753
No 136
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.28 E-value=0.003 Score=59.32 Aligned_cols=130 Identities=20% Similarity=0.278 Sum_probs=70.7
Q ss_pred CcchHHHHHHHHHHHHHhhHHhccCCCCCCCCCCCCCeEEEecC-CccchHHHHHHHhccCCCCCCCceEEEEEecCccc
Q 007247 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271 (611)
Q Consensus 193 ~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dvivh~hd-~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~ 271 (611)
|...+..-..-.+++.+++..|..+ -|.|| ||++|. |-. +++++..+ +++|++..+- .+|.
T Consensus 39 ~~~~~e~~~~rg~av~~a~~~L~~~-------Gf~PD-vI~~H~GWGe---~Lflkdv~------P~a~li~Y~E-~~y~ 100 (171)
T PF12000_consen 39 YVRDFEAAVLRGQAVARAARQLRAQ-------GFVPD-VIIAHPGWGE---TLFLKDVF------PDAPLIGYFE-FYYR 100 (171)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHc-------CCCCC-EEEEcCCcch---hhhHHHhC------CCCcEEEEEE-EEec
Confidence 4444555455566666666666432 25699 777773 443 55777765 8999876543 1221
Q ss_pred cccCcccccccCCCcccccccccccCCCCCCCCcchhH-hHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccce
Q 007247 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI 350 (611)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 350 (611)
..-. ..+...++..+ ......-+..|. ....+..||..++.|.+.+..+-.. + ..||
T Consensus 101 ~~g~-----d~~FDpe~p~~------~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI 158 (171)
T PF12000_consen 101 ASGA-----DVGFDPEFPPS------LDDRARLRMRNAHNLLALEQADAGISPTRWQRSQFPAE----------F-RSKI 158 (171)
T ss_pred CCCC-----cCCCCCCCCCC------HHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCc
Confidence 1110 11111111000 000000011222 2335668999999999988875531 1 2399
Q ss_pred eEeeCCcccCCc
Q 007247 351 KGIVNGMDVQEW 362 (611)
Q Consensus 351 ~vI~Ngvd~~~~ 362 (611)
.||+.|||++.+
T Consensus 159 ~VihdGiDt~~~ 170 (171)
T PF12000_consen 159 SVIHDGIDTDRF 170 (171)
T ss_pred EEeecccchhhc
Confidence 999999998754
No 137
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=97.17 E-value=0.0085 Score=64.43 Aligned_cols=129 Identities=14% Similarity=0.141 Sum_probs=76.1
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.++++..|++..... +.+-.++..+.+.+++++ .+|.+.. ...++ ..++++......+. ..+++.||++
T Consensus 226 ~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~---~~ll~~~~~~ 295 (392)
T TIGR01426 226 PVVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQ---LEILKKADAF 295 (392)
T ss_pred CEEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCH---HHHHhhCCEE
Confidence 345677888644322 222223333333355654 4555432 11221 24556665544443 2589999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
|..+- ..+++||+++|+|.|+....+ ..+.+.+.+.|..+. -+.-+.++++++|.+++.+
T Consensus 296 I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~ 359 (392)
T TIGR01426 296 ITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSD 359 (392)
T ss_pred EECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcC
Confidence 96542 247899999999999976543 223344555676540 0233578999999999987
No 138
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.12 E-value=0.028 Score=61.19 Aligned_cols=180 Identities=14% Similarity=0.051 Sum_probs=111.2
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCC-chhHHHHHHHHHHCC---CceEEecc
Q 007247 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 464 (611)
Q Consensus 391 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~---~~v~~~~~ 464 (611)
|.++|||.+ ..++++.++ ..|-...+++...++.+ |+..|.+.|.|+ ++....+++++++.+ .++++...
T Consensus 421 R~~lglp~~--avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPED--AVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCC--eEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 778999853 344444444 45554555555544444 899999988765 467888999988865 46777777
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccccc-----ceec-CcceEEecccccccccCCccC
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD-----TVEE-GFTGFQMGSFSVDCEAVDPVD 538 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e-----~v~~-g~~G~l~~~~~~~~~~v~~~d 538 (611)
-+.+.-.+-+.-||+++=+.-+ +-..+.+||+.+|+|||+-..-.+.. ++.. |..-++ . .+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~v-----------A-~s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELV-----------A-DS 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhh-----------c-CC
Confidence 7777666889999999855543 23578999999999999753221111 1111 111111 2 34
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH---HH--hhCCchHHHHHHHHHHHHHHHc
Q 007247 539 VAAVSTTVRRALATYGTQALAEMMKNG---MA--QDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 539 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~~--~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
.++.++.--++-.+ ...+.+....- +. --|+.+..+++++.+|.++...
T Consensus 564 ~~dYV~~av~~g~d--ral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RADYVEKAVAFGSD--RALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHhccc--HHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 44444443333333 21222221111 21 2588999999999999998864
No 139
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=97.04 E-value=0.0013 Score=70.40 Aligned_cols=189 Identities=14% Similarity=0.184 Sum_probs=87.2
Q ss_pred ceEEEEeeeec-------CccccccHHHHhccchHHHHhC--------CC----eEEEEeecCCcccccCCCceEEEEEe
Q 007247 85 LNILFVGTEVA-------PWSKTGGLGDVLGGLPPALAAN--------GH----RVMTIAPRYDQYKDAWDTDVVIELKV 145 (611)
Q Consensus 85 MkIl~v~~~~~-------P~~~~GG~~~~~~~La~~L~~~--------Gh----~V~vit~~~~~~~~~~~~~~~~~~~~ 145 (611)
.+|++++.+-. ..+.+||.-.|+.+++++|.+. |- +|.++|..-+..... .-...++-..
T Consensus 273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t-~~~q~le~~~ 351 (550)
T PF00862_consen 273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGT-TCNQRLEKVS 351 (550)
T ss_dssp SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCG-GGTSSEEEET
T ss_pred EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCC-CccccccccC
Confidence 48999997511 1225999999999999999863 43 488888654432211 0011121111
Q ss_pred CCeeeEEEEEEeeecCceEEEEeCccchhhhcCCCCccccCCCCCCCCcchHHHHHHHHHHHH-HhhHHhccCCCCCCCC
Q 007247 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSG 224 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~gv~~~~i~~~~~~~~~~~~~~~~iy~~~~~~~~~~~~~r~~~~~~~~~-~~~~~l~~~~~~~~~~ 224 (611)
+ .+..++.+...++-+-+ + +.|..| ..++. |.. -|...+. ++...+..
T Consensus 352 g--t~~a~IlRvPF~~~~gi-~--~kwisr------f~lWP------yLe------~fa~d~~~~i~~e~~~-------- 400 (550)
T PF00862_consen 352 G--TENARILRVPFGPEKGI-L--RKWISR------FDLWP------YLE------EFADDAEREILAELQG-------- 400 (550)
T ss_dssp T--ESSEEEEEE-ESESTEE-E---S---G------GG-GG------GHH------HHHHHHHHHHHHHHTS--------
T ss_pred C--CCCcEEEEecCCCCcch-h--hhccch------hhchh------hHH------HHHHHHHHHHHHHhCC--------
Confidence 1 11222222221111000 0 123332 11221 222 2233332 33344432
Q ss_pred CCCCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccccccCCCcccccccccccCCCCCCCC
Q 007247 225 PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 304 (611)
Q Consensus 225 ~~~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
.|| +||.|.....+++..+.... ++|.+++-|...-.. +..+++.+-.+...+ .| .
T Consensus 401 --~Pd-lI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek~K-y~~s~~~w~e~e~~Y----hf---------s 456 (550)
T PF00862_consen 401 --KPD-LIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEKTK-YEDSDLYWKEIEEKY----HF---------S 456 (550)
T ss_dssp ----S-EEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HHHH-HHTTTTTSHHHHHHH-----H---------H
T ss_pred --CCc-EEEeccCcchHHHHHHHhhc-------CCceehhhhcccccc-ccccCCCHHHHHhhc----cc---------h
Confidence 599 99999777788888888774 999999999764311 111111111111111 00 0
Q ss_pred cchhHhHHHhhhccEEEecCHHHHH
Q 007247 305 RKINWMKAGILESDMVLTVSPHYAQ 329 (611)
Q Consensus 305 ~~~~~~k~~~~~ad~vi~vS~~~~~ 329 (611)
..+.....++..||.|||.+.....
T Consensus 457 ~qftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 457 CQFTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhhhHHHHHhhcCCEEEEcchHhhc
Confidence 1223334568899999998875544
No 140
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.97 E-value=0.057 Score=56.22 Aligned_cols=211 Identities=13% Similarity=0.084 Sum_probs=129.9
Q ss_pred hccEEEecCHHH-HHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHHHHHHHh
Q 007247 316 ESDMVLTVSPHY-AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (611)
Q Consensus 316 ~ad~vi~vS~~~-~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (611)
..|.|++.++.. +..+.+ +.+ ..++..+++++|.+.|.|.+..
T Consensus 138 ~fd~v~~~g~~l~~~~yyq--~~~--------~~~~~~~~~a~d~~~~~~i~~d-------------------------- 181 (373)
T COG4641 138 IFDNVLSFGGGLVANKYYQ--EGG--------ARNCYYLPWAVDDSLFHPIPPD-------------------------- 181 (373)
T ss_pred hhhhhhhccchHHHHHHHH--hhc--------ccceeccCccCCchhcccCCcc--------------------------
Confidence 345566767766 444332 011 1267788999999988876420
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-------CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh
Q 007247 395 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 395 gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~-------~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
..-.--+.++|.-.+. ..+.++++.. .+-++...|..- -...+.. ....++...+..+.
T Consensus 182 ----a~~~~dL~~ign~~pD-----r~e~~ke~~~~ps~kl~v~rr~~~~g~~y--~~~~~~~---~~~~~~~yIg~~~~ 247 (373)
T COG4641 182 ----ASYDVDLNLIGNPYPD-----RVEEIKEFFVEPSFKLMVDRRFYVLGPRY--PDDIWGR---TWEPNVQYIGYYNP 247 (373)
T ss_pred ----ccceeeeEEecCCCcc-----HHHHHHHHhhccchhhhccceeeecCCcc--chhhhcc---cccchhhhhhccCc
Confidence 0011248888887664 3444444322 134566666541 0011111 01112333333333
Q ss_pred -HHHHHHHHHccEEEeCCCC---CC---CcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHH
Q 007247 468 -PLAHMIIAGADFILIPSRF---EP---CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 468 -~~~~~i~~~aDv~l~pS~~---E~---~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
...+..++.-|+.+.-++. ++ +.+-+.|+|+||.+-|++..-++.-.+.+|+.-.+ ..|..
T Consensus 248 ~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv------------~~d~k 315 (373)
T COG4641 248 KDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIV------------YQDSK 315 (373)
T ss_pred cchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEE------------ecCHH
Confidence 4445577777777765543 22 37889999999999999999999999998876554 48999
Q ss_pred HHHHHHHHHHHhcC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007247 541 AVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 588 (611)
Q Consensus 541 ~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~ 588 (611)
++.+.++.++...+ +.+..+.+.+.+...|+.+.-+.++.+...++..
T Consensus 316 dl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~ 364 (373)
T COG4641 316 DLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINI 364 (373)
T ss_pred HHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 99999999998732 2344444555556679999988888887777543
No 141
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.88 E-value=0.94 Score=49.24 Aligned_cols=216 Identities=13% Similarity=0.101 Sum_probs=111.3
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHH
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (611)
.+++..+.++|.|.+=-+...+.+.+ .|++.. ++.+.+ |+.+.-+.... .....
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~--------------~~~~~ 221 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTE--------------DFTAS 221 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccc--------------ccccc
Confidence 45567788999988888888887775 566533 344433 33322111000 00000
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcC-cccc-c--------CHHHHHHHHHhcccCCcEEEEEeCC------CchhHHHHHHH
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGR-LEEQ-K--------GSDILAAAIPHFIKENVQIIVLGTG------KKPMEKQLEQL 451 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGr-l~~~-K--------g~d~li~a~~~l~~~~~~lvivG~g------~~~~~~~l~~l 451 (611)
..+....+.+. ..++|++.=| +.+. | -...+.+++..+.+++.+++++-.- ..+.....+++
T Consensus 222 ~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l 299 (426)
T PRK10017 222 YAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNL 299 (426)
T ss_pred hhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHH
Confidence 01111112211 2345655433 3211 1 1245666777776667676665531 11122333444
Q ss_pred HHHCCC--ceEE-ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc-cccceec-CcceEEecc
Q 007247 452 EILYPE--KARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMGS 526 (611)
Q Consensus 452 ~~~~~~--~v~~-~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~-g~~G~l~~~ 526 (611)
....+. ++.. ...++..++..++++||+++-.-. =.++=|++.|+|+|+-.... ...++++ |...++.
T Consensus 300 ~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~-- 372 (426)
T PRK10017 300 RQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI-- 372 (426)
T ss_pred HHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe--
Confidence 444332 2222 223555666689999998764332 24566899999999987532 2222221 1112221
Q ss_pred cccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007247 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (611)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 566 (611)
-++.-+.+++.+.+.+++++ .+.+++..++++
T Consensus 373 ------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~v 404 (426)
T PRK10017 373 ------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEAV 404 (426)
T ss_pred ------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 12455678999999999998 555544444443
No 142
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=96.87 E-value=0.039 Score=58.83 Aligned_cols=193 Identities=15% Similarity=0.148 Sum_probs=95.6
Q ss_pred HhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCCccccccccCcchhhhccHHHHH
Q 007247 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (611)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (611)
.........|.+++.|+...+.+.+ .++.+.+ + ++..|..- .|. +........+
T Consensus 127 ~~~~~~~~~d~~~~~s~~~~~~~~~--~f~~~~~------~--i~~~G~PR------~D~----------l~~~~~~~~~ 180 (369)
T PF04464_consen 127 NYKRNYRNYDYFIVSSEFEKEIFKK--AFGYPED------K--ILVTGYPR------NDY----------LFNKSKENRN 180 (369)
T ss_dssp HHHHHHTT-SEEEESSHHHHHHHHH--HTT--GG------G--EEES--GG------GHH----------HHHSTT-HHH
T ss_pred hhhhhccCCcEEEECCHHHHHHHHH--HhccCcc------e--EEEeCCCe------EhH----------HhccCHHHHH
Confidence 3445667899999999999998885 3555533 2 33444321 010 0011112256
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCH--------HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceE
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS--------DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~--------d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~ 460 (611)
.+++.++++. ++.+|+|.-........ ..-++.+..+.+.++.|++-... ......... .....++.
T Consensus 181 ~i~~~~~~~~--~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp--~~~~~~~~~-~~~~~~i~ 255 (369)
T PF04464_consen 181 RIKKKLGIDK--DKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHP--NMKKKFKDF-KEDNSNII 255 (369)
T ss_dssp HHHHHTT--S--S-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SH--HHHTT-----TT-TTTEE
T ss_pred HHHHHhccCC--CCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCc--hhhhchhhh-hccCCcEE
Confidence 7788888764 44689998655433222 11223333444578888776542 222222222 22233454
Q ss_pred EecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEc--CC-------cccccceecCcceEEeccccccc
Q 007247 461 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--ST-------GGLVDTVEEGFTGFQMGSFSVDC 531 (611)
Q Consensus 461 ~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s--~~-------gg~~e~v~~g~~G~l~~~~~~~~ 531 (611)
.... ...+.+++..||++|- -++-++.|++.+++|||.- +. |...+ ..+...|-.
T Consensus 256 ~~~~--~~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~-------- 319 (369)
T PF04464_consen 256 FVSD--NEDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPI-------- 319 (369)
T ss_dssp E-TT---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-E--------
T ss_pred ECCC--CCCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCce--------
Confidence 3322 2246679999999983 2456899999999999954 32 11112 112223332
Q ss_pred ccCCccCHHHHHHHHHHHHHh
Q 007247 532 EAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 532 ~~v~~~d~~~la~~i~~ll~~ 552 (611)
..+.++|.++|..++++
T Consensus 320 ----~~~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 320 ----VYNFEELIEAIENIIEN 336 (369)
T ss_dssp ----ESSHHHHHHHHTTHHHH
T ss_pred ----eCCHHHHHHHHHhhhhC
Confidence 36889999999999886
No 143
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.85 E-value=0.15 Score=52.72 Aligned_cols=164 Identities=15% Similarity=0.099 Sum_probs=105.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeCC--CchhHHHHHHHHHHC-C-CceEEecc-cChHHHHHHHH
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAK-FNIPLAHMIIA 475 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~v~~~~~-~~~~~~~~i~~ 475 (611)
+.+|+.-.+-++.-++..+++++++...+++++++ .|-| .++|.+++.+.+.++ + +++...-. .+-++.-.+++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 34555544567788899999999886667888766 4444 356888888888764 4 35654443 35566778999
Q ss_pred HccEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcC
Q 007247 476 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (611)
Q Consensus 476 ~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 554 (611)
.||+.++.... ++.|+.++ .+.+|+||+.+...-.-..+.+.+--+++ .-|.-|.+.+.++=+++..- +
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~~-d 334 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLANV-D 334 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhhC-c
Confidence 99999999854 89999877 79999999999865544444444333443 11333444444443333322 1
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 555 TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
. + .-.|.-.+..+.|.+.+..
T Consensus 335 k--------~--~iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 335 K--------Q--QIAFFAPNYLQGWRQALRL 355 (360)
T ss_pred c--------c--ceeeeCCchHHHHHHHHHH
Confidence 1 1 1236666677777776653
No 144
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.65 E-value=0.28 Score=48.59 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=57.0
Q ss_pred CCcEEEEEcCcccccCH--HHHHHHHHhccc----CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh----HHH
Q 007247 401 NIPVIGFIGRLEEQKGS--DILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI----PLA 470 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~--d~li~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~----~~~ 470 (611)
...+-+++|.=.++-.. |.+.+.+..+.+ ..+.|++--+-. -.+.++++....-....+.++-+. .-.
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY 238 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--TPDTVKSILKNNLNSSPGIVWNNEDTGYNPY 238 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--CcHHHHHHHHhccccCceeEeCCCCCCCCch
Confidence 45688899987765543 344443333322 567777765533 122333333321111111111111 123
Q ss_pred HHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007247 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 471 ~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 508 (611)
..+++.||.++.+-.. =.-+.||.+.|+||.+-.-
T Consensus 239 ~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 239 IDMLAAADYIISTADS---INMCSEAASTGKPVFILEP 273 (329)
T ss_pred HHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence 3699999999977542 3457899999999987543
No 145
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.49 E-value=0.097 Score=60.06 Aligned_cols=262 Identities=20% Similarity=0.241 Sum_probs=160.1
Q ss_pred CCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecCccccccCcccc-cccCCCcccccccccccCCCCCCCCcc
Q 007247 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (611)
Q Consensus 228 ~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
-| +|..||++..++|.+++... .++++-+..|.. |+.... ..+- .
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhsp-----fpssEi~r~lp----------------------~ 186 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSP-----FPSSEIYRCLP----------------------V 186 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccCC-----CChHHHHHhcc----------------------c
Confidence 47 99999999999998888764 578888888843 221110 1000 0
Q ss_pred hhHhHHHhhhccEEEecCHHHHHHHHcCc--CCCcccc-----hhh----hccceeEeeCCcccCCcCCCCccccccccC
Q 007247 307 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD-----NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375 (611)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~-----~~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~ 375 (611)
..-+-.++..+|.+=..+..++..+.+.+ ..+++.. ..+ +...+..+|-|+|+..+.....-
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~------- 259 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL------- 259 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-------
Confidence 11122355566766666666655443311 0111111 000 12355667778877766432210
Q ss_pred cchhhhccHHH-HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCC----chh
Q 007247 376 ASTVMDAKPLL-KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPM 444 (611)
Q Consensus 376 ~~~~~~~~~~~-~~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~------~~~~lvivG~g~----~~~ 444 (611)
..... ..+++..+ .++.+|+-+-|+...||...=+.++.++.+ +.+.++.+..+. +++
T Consensus 260 ------~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v 328 (732)
T KOG1050|consen 260 ------PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEV 328 (732)
T ss_pred ------hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHH
Confidence 00111 22233332 256789999999999999888888888765 356666665543 122
Q ss_pred ---HHHHHHHHH----HCCC----ceE-EecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcC----CceEEcCC
Q 007247 445 ---EKQLEQLEI----LYPE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVAST 508 (611)
Q Consensus 445 ---~~~l~~l~~----~~~~----~v~-~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G----~PvI~s~~ 508 (611)
...+..... +++. .+. ..-.++...+-+++.-+|+.++.+..+|..++.+|+..|. .+.|.+..
T Consensus 329 ~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef 408 (732)
T KOG1050|consen 329 EELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEF 408 (732)
T ss_pred HHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeee
Confidence 222222222 2221 111 1223355566679999999999999999999999999873 67888888
Q ss_pred cccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhc
Q 007247 509 GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (611)
Q Consensus 509 gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 553 (611)
-|..++.+++.-. +.|.|.++++..|..+++.+
T Consensus 409 ~G~~~tl~d~aiv------------vnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 409 IGDDTTLEDAAIV------------VNPWDGDEFAILISKALTMS 441 (732)
T ss_pred ccccccccccCEE------------ECCcchHHHHHHHHHHhhcC
Confidence 8878887665322 38999999999999999983
No 146
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.29 E-value=1.7 Score=45.08 Aligned_cols=137 Identities=13% Similarity=0.174 Sum_probs=73.7
Q ss_pred cEEEEEcCcc-cccCHHHHHHHHHhccc-CCcEEEEEeCCC-chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 403 PVIGFIGRLE-EQKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 403 ~~il~iGrl~-~~Kg~d~li~a~~~l~~-~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
.+++.+|.-. -..=++..++|...+.. ...-++|.|.-- ..-.+++...+.+.| ++. +..|..+.. .++++|+.
T Consensus 221 ~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~-I~~f~~~~~-~ll~gA~~ 297 (400)
T COG4671 221 DILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HIS-IFEFRNDFE-SLLAGARL 297 (400)
T ss_pred eEEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeE-EEEhhhhHH-HHHHhhhe
Confidence 4566666543 23334445555555433 222366666642 223333444443334 343 445555544 69999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccc-c-ceec---CcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-D-TVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e-~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
.|--.-+ ++.+|-++.|+|.+.-..+.-. | ++.- .+-|+. +..+-+.-+++.++++|..+++.
T Consensus 298 vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~------dvL~pe~lt~~~La~al~~~l~~ 365 (400)
T COG4671 298 VVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLV------DVLLPENLTPQNLADALKAALAR 365 (400)
T ss_pred eeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcc------eeeCcccCChHHHHHHHHhcccC
Confidence 8844432 6789999999997665432212 2 2211 122321 01111344578999999988874
No 147
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=96.16 E-value=0.11 Score=56.08 Aligned_cols=159 Identities=17% Similarity=0.159 Sum_probs=96.3
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
..++.+..|..... .+++-.+++.+.+-+.++++...+.+ ......|+++.....++.. .++..||++
T Consensus 237 ~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-------~~~~~~p~n~~v~~~~p~~---~~l~~ad~v 304 (406)
T COG1819 237 RPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-------DTLVNVPDNVIVADYVPQL---ELLPRADAV 304 (406)
T ss_pred CCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-------cccccCCCceEEecCCCHH---HHhhhcCEE
Confidence 33456667777655 33333344444445888888775421 1112345566655554443 389999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcCHH
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 556 (611)
|...- -.++.||+.+|+|+|+-..+. ..+-+++-++|... -.+.-+.+.++++|.++|.+..-.
T Consensus 305 I~hGG----~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~~~~~ 372 (406)
T COG1819 305 IHHGG----AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLADDSYR 372 (406)
T ss_pred EecCC----cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcCHHHH
Confidence 97653 357899999999999876543 44556677788765 224788999999999999972112
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHH
Q 007247 557 ALAEMMKNGMAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 557 ~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (611)
+..+..++.+.+.-..+.+++.+++++
T Consensus 373 ~~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 373 RAAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 222222222344444444444444443
No 148
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.42 E-value=0.68 Score=48.14 Aligned_cols=105 Identities=17% Similarity=0.087 Sum_probs=67.6
Q ss_pred CCcEEEEEcCccccc--CHH---HHHHHHHhccc-CCcEEEEEeCC--CchhHHHHHHHHHHCCCceEEeccc-ChHHHH
Q 007247 401 NIPVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF-NIPLAH 471 (611)
Q Consensus 401 ~~~~il~iGrl~~~K--g~d---~li~a~~~l~~-~~~~lvivG~g--~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~ 471 (611)
...+.+.+|.-.... +.+ .+++.+..+.+ .+.++.|..+- +.+.++.|+++....+ .+..+..- ..+ +.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~~~~~~~~~~nP-y~ 223 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-GVYIWDGTGENP-YL 223 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-ceEEecCCCCCc-HH
Confidence 334666788654332 334 45555555554 46788888874 3456777776665443 24233222 223 44
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (611)
.+++.||.++++.- .-.-+.||.+.|+||.+-...+
T Consensus 224 ~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 224 GFLAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 69999999999865 3345899999999999988665
No 149
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=95.07 E-value=0.033 Score=56.58 Aligned_cols=43 Identities=16% Similarity=0.317 Sum_probs=36.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
|+|++|+.-.+|+ ..||++..+..|.+.|.+.-..|..++++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~ 43 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANP 43 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence 8999999988997 889999999999999988666666667664
No 150
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=94.12 E-value=0.099 Score=44.32 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=58.5
Q ss_pred EEEEeCCCchhHHHHHHHHHHCCCceEEe---cccChHH--HHHHHHHccEEEeCCCC---CCCcHHHHHHHHcCCceEE
Q 007247 434 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 505 (611)
Q Consensus 434 lvivG~g~~~~~~~l~~l~~~~~~~v~~~---~~~~~~~--~~~i~~~aDv~l~pS~~---E~~gl~~lEAma~G~PvI~ 505 (611)
++|+|. .+.+...++++..+++.++..+ ..+.... ++..+..||++|++..+ ..+-.+--+|-..|+|++-
T Consensus 2 vliVGG-~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGG-REDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcC-CcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 567774 2236778888888888777777 4454444 77899999999998876 3345567788899999999
Q ss_pred cCCcccccc
Q 007247 506 ASTGGLVDT 514 (611)
Q Consensus 506 s~~gg~~e~ 514 (611)
++..|...+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 987665543
No 151
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=93.03 E-value=5.1 Score=40.49 Aligned_cols=87 Identities=17% Similarity=0.301 Sum_probs=55.6
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEE-EEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEe
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~ 482 (611)
+++..|.-++ |+ +..+.+..|.+.++.+ +++|.+.+.+. .+.+...++++ +..+ .+.+.+..+|..||+.+.
T Consensus 161 ilI~lGGsDp-k~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~-~l~k~~~~~~~-i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSDP-KN--LTLKVLAELEQKNVNLHIVVGSSNPTLK-NLRKRAEKYPN-INLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCCh-hh--hHHHHHHHhhccCeeEEEEecCCCcchh-HHHHHHhhCCC-eeeE--ecchhHHHHHHhcchhee
Confidence 5666666554 53 4566666666544444 34465555444 44455555553 4332 344556689999999885
Q ss_pred CCCCCCCcHHHHHHHHcCCc
Q 007247 483 PSRFEPCGLIQLHAMRYGTV 502 (611)
Q Consensus 483 pS~~E~~gl~~lEAma~G~P 502 (611)
. -|.++.||...|+|
T Consensus 234 A-----aGstlyEa~~lgvP 248 (318)
T COG3980 234 A-----AGSTLYEALLLGVP 248 (318)
T ss_pred c-----cchHHHHHHHhcCC
Confidence 3 47999999999999
No 152
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=92.82 E-value=0.44 Score=44.19 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=17.7
Q ss_pred HhhhccEEEecCHHHHHHHHc
Q 007247 313 GILESDMVLTVSPHYAQELVS 333 (611)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~ 333 (611)
....||.|++.|.+..+.+.+
T Consensus 116 saLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 116 SALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHHhceeeeecchhhHHHHHH
Confidence 345799999999999998775
No 153
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=92.53 E-value=13 Score=37.50 Aligned_cols=137 Identities=15% Similarity=0.135 Sum_probs=72.1
Q ss_pred EEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCc-hhHHHHHH--------------HHHHCCC-ceEEecccChH
Q 007247 406 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKK-PMEKQLEQ--------------LEILYPE-KARGVAKFNIP 468 (611)
Q Consensus 406 l~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~-~~~~~l~~--------------l~~~~~~-~v~~~~~~~~~ 468 (611)
+|+||....||+..+++.-++..+ ++..-++-|-... .....++. .. -.|+ -+..++.+-.+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~-~~pN~~~~v~~~Yi~~ 265 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPK-PAPNSPVPVYGPYIRS 265 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG----SSS--EEEESS--HH
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcc-cCCCCcceecchhhhH
Confidence 899999999999999999888776 6888888885432 11111111 00 0111 13334445445
Q ss_pred HHHHHHHHccEEEeCCC------CCCCcHHHHHHHHcCCceEEc-CCccccc-cee-----cCcceEEecccccccccCC
Q 007247 469 LAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVA-STGGLVD-TVE-----EGFTGFQMGSFSVDCEAVD 535 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~------~E~~gl~~lEAma~G~PvI~s-~~gg~~e-~v~-----~g~~G~l~~~~~~~~~~v~ 535 (611)
..-..++.+-+...-+. .+..-.+.+|..|||+-+|-- ++|-... .++ +-..|.+ +++
T Consensus 266 E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I---------~~D 336 (355)
T PF11440_consen 266 EGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAI---------YFD 336 (355)
T ss_dssp HHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-E---------EE-
T ss_pred HHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCccee---------Eec
Confidence 55567777777665542 245778999999999876654 4553333 121 1123443 248
Q ss_pred ccCHHHHHHHHHHHHHh
Q 007247 536 PVDVAAVSTTVRRALAT 552 (611)
Q Consensus 536 ~~d~~~la~~i~~ll~~ 552 (611)
..|.++-.+.|.++..+
T Consensus 337 e~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 337 ENDLESTVEKLIEVANN 353 (355)
T ss_dssp TTSHHHHHHHHHHHHT-
T ss_pred cchHHHHHHHHHHHhcc
Confidence 88888888887776554
No 154
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=92.26 E-value=0.017 Score=54.10 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=50.8
Q ss_pred ceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccc--------ccceecCcceEEeccccc
Q 007247 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSV 529 (611)
Q Consensus 458 ~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~ 529 (611)
++..+...+ + +..+++.||++|.- +=+.++.|++++|+|.|.-...+. ...+.+.+.+..+
T Consensus 56 ~v~~~~~~~-~-m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~----- 124 (167)
T PF04101_consen 56 NVKVFGFVD-N-MAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML----- 124 (167)
T ss_dssp CCEEECSSS-S-HHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS-----
T ss_pred cEEEEechh-h-HHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc-----
Confidence 455443333 2 56799999988832 234799999999999887665441 2222233334432
Q ss_pred ccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHH
Q 007247 530 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 563 (611)
Q Consensus 530 ~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 563 (611)
.-...+.+.|.++|..++.+ +....++.+
T Consensus 125 ---~~~~~~~~~L~~~i~~l~~~--~~~~~~~~~ 153 (167)
T PF04101_consen 125 ---DESELNPEELAEAIEELLSD--PEKLKEMAK 153 (167)
T ss_dssp ---ECCC-SCCCHHHHHHCHCCC--HH-SHHHCC
T ss_pred ---CcccCCHHHHHHHHHHHHcC--cHHHHHHHH
Confidence 01223468899999998887 554444443
No 155
>PLN02448 UDP-glycosyltransferase family protein
Probab=92.18 E-value=3 Score=45.94 Aligned_cols=135 Identities=13% Similarity=0.080 Sum_probs=75.3
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 401 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 401 ~~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+..+++..|.... ..-+..++++++. .+..++++..++. ..+.+. .+++.... .+-.+. ++++..+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~~~---~~~~~~v~-~w~pQ~--~iL~h~~ 341 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLKEI---CGDMGLVV-PWCDQL--KVLCHSS 341 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHhHh---ccCCEEEe-ccCCHH--HHhccCc
Confidence 3356677787643 2224445555554 4678887665431 112221 12334333 333222 4788888
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+.++-++ +=.++++||+.+|+|+|+-...+ ....+.+. +.|+-+. ...+ .-...+.+++++++++++.+
T Consensus 342 v~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~-~~~~--~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 342 VGGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVK-REVG--EETLVGREEIAELVKRFMDL 415 (459)
T ss_pred cceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEe-cccc--cCCcCcHHHHHHHHHHHhcC
Confidence 8555555 22368999999999999976543 33334332 4566441 0000 00124679999999999975
No 156
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=91.70 E-value=2.3 Score=44.55 Aligned_cols=112 Identities=20% Similarity=0.213 Sum_probs=68.4
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcC-cccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceE-Eec
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GVA 463 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGr-l~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~-~~~ 463 (611)
..+..+++++.+ +..+++..|. ..+.|.+ +...+.++.+.+.+.+++++|+..+ .+..+++....+..+. ..+
T Consensus 162 ~~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l~g 238 (334)
T TIGR02195 162 AAALAKFGLDTE-RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNLAG 238 (334)
T ss_pred HHHHHHcCCCCC-CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccCCC
Confidence 344556665421 2234455655 3466654 4777777777666789999997542 3344555544443333 233
Q ss_pred ccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 464 ~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
..+-.++..+++.||++|-.-. |.. ==|.|.|+|+|+--
T Consensus 239 ~~sL~el~ali~~a~l~I~~DS----Gp~-HlAaA~~~P~i~lf 277 (334)
T TIGR02195 239 ETSLDEAVDLIALAKAVVTNDS----GLM-HVAAALNRPLVALY 277 (334)
T ss_pred CCCHHHHHHHHHhCCEEEeeCC----HHH-HHHHHcCCCEEEEE
Confidence 4455667789999999996543 222 23779999999853
No 157
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=91.35 E-value=8.5 Score=40.65 Aligned_cols=103 Identities=13% Similarity=-0.002 Sum_probs=64.3
Q ss_pred CCcEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCC-Cce-EEecccChHHHHHHHHH
Q 007247 401 NIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKA-RGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v-~~~~~~~~~~~~~i~~~ 476 (611)
+..+++..|.-.+.|.+ +...+.++.|.+.+.+++++|...+.-.+..+++..... ..+ ...+..+-.++..+++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 262 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH 262 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence 34566777776677764 467777777766688999988643222233344443321 122 23344455667789999
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 508 (611)
||++|-.-. |..=+ |.|+|+|+|+--.
T Consensus 263 a~l~v~nDS----Gp~Hl-AaA~g~P~v~lfG 289 (352)
T PRK10422 263 AQLFIGVDS----APAHI-AAAVNTPLICLFG 289 (352)
T ss_pred CCEEEecCC----HHHHH-HHHcCCCEEEEEC
Confidence 999996543 33333 7789999998643
No 158
>PLN02562 UDP-glycosyltransferase
Probab=90.36 E-value=5.2 Score=43.89 Aligned_cols=130 Identities=9% Similarity=0.001 Sum_probs=76.1
Q ss_pred CcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEE-EeCCCc-hhHHHHHHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 402 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 402 ~~~il~iGrl~---~~Kg~d~li~a~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
..+++..|... ..+-+..++.+++++ +..+++ +..+.. .+.+.+ ....++++....+.+.. .+++.
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~---~~~~~~~~~v~~w~PQ~---~iL~h 344 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGY---VERVSKQGKVVSWAPQL---EVLKH 344 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHH---HHHhccCEEEEecCCHH---HHhCC
Confidence 35777888854 344456666666665 335554 332211 111111 11223445433332332 47888
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceec-CcceEEecccccccccCCccCHHHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (611)
Q Consensus 477 aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~ 551 (611)
.++.++-++. =-++.+||+.+|+|+|+-...+ ....+.+ -+.|+-+ ...+.++++++|++++.
T Consensus 345 ~~v~~fvtH~--G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 345 QAVGCYLTHC--GWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred CccceEEecC--cchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 8876666662 2368999999999999875433 3334433 3566654 44578999999999997
Q ss_pred h
Q 007247 552 T 552 (611)
Q Consensus 552 ~ 552 (611)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
No 159
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=89.88 E-value=1.6 Score=40.93 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=22.7
Q ss_pred hhhccEEEecCHHHHHHHHcCcCCCcccc
Q 007247 314 ILESDMVLTVSPHYAQELVSGEDKGVELD 342 (611)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 342 (611)
-..+|+.++.|+..++++.+ +|++.+
T Consensus 135 ~~~~D~y~Vase~~~~~l~~---~Gi~~~ 160 (169)
T PF06925_consen 135 HPGVDRYFVASEEVKEELIE---RGIPPE 160 (169)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh
Confidence 44799999999999999997 888876
No 160
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=89.65 E-value=2.8 Score=41.65 Aligned_cols=102 Identities=16% Similarity=0.117 Sum_probs=60.7
Q ss_pred CCcEEEEEcCcccccCHHH--HHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC-ceEEecccChHHHHHHHHHc
Q 007247 401 NIPVIGFIGRLEEQKGSDI--LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGA 477 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~--li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~i~~~a 477 (611)
+..++++.|.-.+.|.+.. ..+.+..|.+..++++++|...+...+..+++....+. .+...+..+-.++..+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 3456667777667777544 88888888776689999997764334555555554432 23444455666677899999
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 478 Dv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
|++|-+-. |..=+ |.+.|+|+|+--
T Consensus 185 ~~~I~~Dt----g~~Hl-A~a~~~p~v~lf 209 (247)
T PF01075_consen 185 DLVIGNDT----GPMHL-AAALGTPTVALF 209 (247)
T ss_dssp SEEEEESS----HHHHH-HHHTT--EEEEE
T ss_pred CEEEecCC----hHHHH-HHHHhCCEEEEe
Confidence 99997653 33333 788999999864
No 161
>PLN02670 transferase, transferring glycosyl groups
Probab=89.63 E-value=7.9 Score=42.74 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=63.9
Q ss_pred HHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
++++...+..+-++ || ++.+||+.+|+|+|+-...+ ....+.+.+.|+.+.....+ ..-+.+++.++|
T Consensus 351 ~IL~H~~v~~FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av 423 (472)
T PLN02670 351 KILSHESVGGFLTH---CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESV 423 (472)
T ss_pred HHhcCcccceeeec---CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHH
Confidence 37888887666666 44 68999999999999975432 33344456678765100000 113689999999
Q ss_pred HHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007247 547 RRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 586 (611)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l 586 (611)
++++.+.+-..+++.+++. +..+=.-+..++.+++.+.+.
T Consensus 424 ~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 424 RLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 9999763222333333221 234444455555555555443
No 162
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=89.45 E-value=8.3 Score=39.98 Aligned_cols=135 Identities=13% Similarity=0.088 Sum_probs=77.4
Q ss_pred CcEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 402 IPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
+.++++.|.=.+.|.+ +...+.++.+.+.+.+++++|+++. ..+..+++....+. ....+..+-.++..+++.||+
T Consensus 180 ~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l 257 (319)
T TIGR02193 180 PYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADA 257 (319)
T ss_pred CEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCE
Confidence 3456667755566765 5777777777656789888865542 22334555555443 223344555667789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec-Cc-ceEEecccccccccCCccCHHHHHHHHHHH
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~-~G~l~~~~~~~~~~v~~~d~~~la~~i~~l 549 (611)
+|-+-. |..=+ |.+.|+|+|+--.+..+..... +. ...+. .+ .++.=+++++.+++.++
T Consensus 258 ~I~~DS----gp~Hl-Aaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~----~~--~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 258 VVGVDT----GLTHL-AAALDKPTVTLYGATDPGRTGGYGKPNVALL----GE--SGANPTPDEVLAALEEL 318 (319)
T ss_pred EEeCCC----hHHHH-HHHcCCCEEEEECCCCHhhcccCCCCceEEc----cC--ccCCCCHHHHHHHHHhh
Confidence 996543 33222 6788999998543322222111 11 11111 01 13455677777777665
No 163
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.75 E-value=3.1 Score=42.30 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=63.8
Q ss_pred EEEEEcCcccccC--HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHC-CCceE-EecccChHHHHHHHHHccE
Q 007247 404 VIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY-PEKAR-GVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 404 ~il~iGrl~~~Kg--~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~-~~~~~~~~~~~~i~~~aDv 479 (611)
+++..|.-.+.|. .+.+.+.++.+.+.+++++++|..+ -.+..+++.... ..++. ..+..+-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 4555655555554 4678888888876789999999754 234445554443 12222 2333344566789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCcc
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (611)
++-+.. |..-+ |.+.|+|+|+--.+.
T Consensus 202 ~I~~Ds----g~~Hl-A~a~~~p~i~l~g~~ 227 (279)
T cd03789 202 VVTNDS----GPMHL-AAALGTPTVALFGPT 227 (279)
T ss_pred EEeeCC----HHHHH-HHHcCCCEEEEECCC
Confidence 997653 45545 469999998865433
No 164
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=87.28 E-value=27 Score=35.80 Aligned_cols=100 Identities=14% Similarity=0.002 Sum_probs=58.0
Q ss_pred cEEEEEcCcc---cccCHHHHHHHHHhcccC-CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 403 PVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 403 ~~il~iGrl~---~~Kg~d~li~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+.|++.-|-. .....+.+.+++..+.+. +.+++++.-....-.+..+++....+.........+.++.-.++++||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4555544432 122356777888877653 777766654322223455556555443222223335555667999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
+++-... =..+=|+.+|+|+|+-.
T Consensus 253 ~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEech-----HHHHHHHHcCCCEEEee
Confidence 7664443 24556899999999764
No 165
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=86.43 E-value=4.7 Score=42.33 Aligned_cols=98 Identities=21% Similarity=0.234 Sum_probs=69.3
Q ss_pred cEEEEEc-CcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 403 PVIGFIG-RLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 403 ~~il~iG-rl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
.+++..| .-...|.+ +...+.++.+.+...++++.|+. +-.+..+++...+++.+...+.-+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 4566677 55566664 47777778777777999999977 3567777788777643334445555666689999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 480 ILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 480 ~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
+|-+.. |..=+ |.+.|+|+|+--
T Consensus 255 ~I~~DS----g~~Hl-AaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS----GPMHL-AAALGTPTIALY 277 (334)
T ss_pred EEccCC----hHHHH-HHHcCCCEEEEE
Confidence 886654 44433 789999999865
No 166
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=86.25 E-value=13 Score=40.89 Aligned_cols=70 Identities=20% Similarity=0.182 Sum_probs=48.1
Q ss_pred HHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
.+++..++-.+-++ || ++++||+.+|+|+|+-...+ ....+.+. +.|+.+. ..-+.++++++
T Consensus 336 ~iL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~a 403 (451)
T PLN02410 336 EVLSHPAVGGFWSH---CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERA 403 (451)
T ss_pred HHhCCCccCeeeec---CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHH
Confidence 37888777555555 33 58999999999999875432 33333333 5676541 23477999999
Q ss_pred HHHHHHhc
Q 007247 546 VRRALATY 553 (611)
Q Consensus 546 i~~ll~~~ 553 (611)
|++++.+.
T Consensus 404 v~~lm~~~ 411 (451)
T PLN02410 404 VKRLMVEE 411 (451)
T ss_pred HHHHHcCC
Confidence 99999763
No 167
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=86.04 E-value=13 Score=39.03 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=62.2
Q ss_pred cEEEEEcCcccccC--HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC-ceE-EecccChHHHHHHHHHcc
Q 007247 403 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KAR-GVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 403 ~~il~iGrl~~~Kg--~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~-~~~~~~~~~~~~i~~~aD 478 (611)
.+++..|.-.+.|. .+...+.++.|.+++.+++++|...+.-.+..+++....+. ++. ..+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566666556665 45667777777656789999986432222334444443321 232 234445566778999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
++|-.-. |..=+ |.|.|+|+|+--
T Consensus 263 l~Vs~DS----Gp~Hl-AaA~g~p~v~Lf 286 (344)
T TIGR02201 263 LFIGVDS----VPMHM-AAALGTPLVALF 286 (344)
T ss_pred EEEecCC----HHHHH-HHHcCCCEEEEE
Confidence 9996543 33333 789999999864
No 168
>PLN02210 UDP-glucosyl transferase
Probab=84.92 E-value=14 Score=40.54 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=75.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEE-eCCC-chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lviv-G~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 479 (611)
..+.+..|.+... ..+.+-+.+.-|...+.+|+++ +... ......+++... +++.. +..|-.+. .+++.+++
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~-v~~w~PQ~--~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGV-VLEWSPQE--KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeE-EEecCCHH--HHhcCcCc
Confidence 4567778887542 3344444444444435566553 3211 111122222211 12222 23443332 48888886
Q ss_pred EEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceec-CcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 480 ILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 480 ~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
.++-++ || ++.+||+.+|+|+|+-...+ ....+.+ -+.|..+..-..+ ..-+.++++++|++++.+
T Consensus 344 g~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 665565 33 58999999999999976433 3334444 4677765100000 124778999999999976
No 169
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=84.70 E-value=4.9 Score=33.13 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=24.2
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEEecC
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 268 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~iH~~ 268 (611)
+.| |||.|...+.+..-.+.... ..|.|.|||-|+.
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~-----~mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHAR-----TMGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHH-----hCCCcEEeecccc
Confidence 589 99999766555443333221 1599999999943
No 170
>PLN03007 UDP-glucosyltransferase family protein
Probab=84.45 E-value=17 Score=40.22 Aligned_cols=141 Identities=12% Similarity=0.006 Sum_probs=72.2
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEE-EeCCCc------hhHHHHHHHHHHCCCceEEecccChHHHH
Q 007247 401 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIV-LGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAH 471 (611)
Q Consensus 401 ~~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvi-vG~g~~------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 471 (611)
+..+.+..|.... .+.+..++++++.+ +..|++ ++.... .+.+.+++.. .+.++....+.+..
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~--~~~g~~v~~w~PQ~--- 356 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERT--KGKGLIIRGWAPQV--- 356 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHh--ccCCEEEecCCCHH---
Confidence 3467777888753 33344444554444 445444 332110 0111111111 12334433333332
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceec-CcceEEeccccccc-ccCCccCHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDC-EAVDPVDVAAVSTT 545 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~-~~v~~~d~~~la~~ 545 (611)
.+++.+++-++-++. =-++++||+.+|+|+|+-...+ ....+.+ -+.|+-++.-.. . ..-+.-+.++++++
T Consensus 357 ~iL~h~~v~~fvtH~--G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~l~~a 433 (482)
T PLN03007 357 LILDHQATGGFVTHC--GWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKL-VKVKGDFISREKVEKA 433 (482)
T ss_pred HHhccCccceeeecC--cchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccc-cccccCcccHHHHHHH
Confidence 488888876666652 1368999999999999976433 2222211 133443210000 0 00022468999999
Q ss_pred HHHHHHh
Q 007247 546 VRRALAT 552 (611)
Q Consensus 546 i~~ll~~ 552 (611)
|++++.+
T Consensus 434 v~~~m~~ 440 (482)
T PLN03007 434 VREVIVG 440 (482)
T ss_pred HHHHhcC
Confidence 9999976
No 171
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=84.04 E-value=4 Score=45.34 Aligned_cols=139 Identities=17% Similarity=0.100 Sum_probs=76.6
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecc
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~---~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
.+++..+.-+ .++..+++..|.+.. .+-.+.++++++++ +.++++.=.+.. ...+ +.++...-+
T Consensus 264 ~~~~~~~~~~-~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~-----~~~l----~~n~~~~~W 330 (500)
T PF00201_consen 264 EELWNFLDSS-GKKGVVYVSFGSIVSSMPEEKLKEIAEAFENL---PQRFIWKYEGEP-----PENL----PKNVLIVKW 330 (500)
T ss_dssp HHHHHHTSTT-TTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCS---TTEEEEEETCSH-----GCHH----HTTEEEESS
T ss_pred cccchhhhcc-CCCCEEEEecCcccchhHHHHHHHHHHHHhhC---CCcccccccccc-----cccc----cceEEEecc
Confidence 3444444321 124456777888753 11244566666666 337887766531 1112 234543333
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecCcceEEecccccccccCCccCHH
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 540 (611)
.+.. ++++...+-++-++ |=-.+++||+.+|+|+|+-..-| ....+++.+.|.... ...-+.+
T Consensus 331 ~PQ~---~lL~hp~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~--------~~~~~~~ 397 (500)
T PF00201_consen 331 LPQN---DLLAHPRVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD--------KNDLTEE 397 (500)
T ss_dssp --HH---HHHTSTTEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG--------GGC-SHH
T ss_pred ccch---hhhhcccceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE--------ecCCcHH
Confidence 3332 47877766665565 22357999999999999976422 344455556677651 1223568
Q ss_pred HHHHHHHHHHHh
Q 007247 541 AVSTTVRRALAT 552 (611)
Q Consensus 541 ~la~~i~~ll~~ 552 (611)
++.++|+++++|
T Consensus 398 ~l~~ai~~vl~~ 409 (500)
T PF00201_consen 398 ELRAAIREVLEN 409 (500)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhh
Confidence 999999999997
No 172
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=83.74 E-value=5.6 Score=40.29 Aligned_cols=101 Identities=15% Similarity=0.139 Sum_probs=59.2
Q ss_pred CCCcEEEEEcCcccc-------cCHHHHHHHHHhccc--CCcEEEEEeCCCc---hhHHHHHHHHHHCCCceEEecccCh
Q 007247 400 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 467 (611)
Q Consensus 400 ~~~~~il~iGrl~~~-------Kg~d~li~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (611)
.+++.|++....... .....+++.+..+.+ ++.+|+|==.... .....+.++.. .. ++.... +.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~-~~~~~~--~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LP-NVVIID--DD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CC-CeEEEC--CC
Confidence 456788888887654 234455555555544 5788877443210 11123333322 12 222221 12
Q ss_pred HHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc
Q 007247 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (611)
Q Consensus 468 ~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g 509 (611)
-.+..++..||.++.-+ +.+-+||+.+|+|||+-...
T Consensus 191 ~~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred CCHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence 23457999999988554 47999999999999996543
No 173
>PLN02167 UDP-glycosyltransferase family protein
Probab=82.33 E-value=22 Score=39.38 Aligned_cols=141 Identities=15% Similarity=0.043 Sum_probs=70.2
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEE-eCCCchh---HHHH-HHHHHHCCCceEEecccChHHHHHHH
Q 007247 402 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPM---EKQL-EQLEILYPEKARGVAKFNIPLAHMII 474 (611)
Q Consensus 402 ~~~il~iGrl~--~~Kg~d~li~a~~~l~~~~~~lviv-G~g~~~~---~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~ 474 (611)
..+.+..|.+. ..+-+..++.+++.. +..++++ +...... ...+ +.......++... ..+-.+ . .++
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v-~~w~PQ-~-~iL 354 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLV-CGWAPQ-V-EIL 354 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhccCeee-eccCCH-H-HHh
Confidence 35667778764 233456666666665 4566544 3211100 0000 0111111112222 233222 2 377
Q ss_pred HHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----ccc-ceecCcceEEecccccccccCCccCHHHHHHHHHH
Q 007247 475 AGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ 548 (611)
+...+-.+-++ || ++.+||+++|+|+|+-...+ ... +++.-+.|+.+..-..+ +.-..-+.++++++|++
T Consensus 355 ~h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~-~~~~~~~~~~l~~av~~ 430 (475)
T PLN02167 355 AHKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVS-AYGEIVKADEIAGAVRS 430 (475)
T ss_pred cCcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccc-ccCCcccHHHHHHHHHH
Confidence 77665444444 33 48999999999999876433 221 24444567654100000 00012367899999999
Q ss_pred HHHh
Q 007247 549 ALAT 552 (611)
Q Consensus 549 ll~~ 552 (611)
++.+
T Consensus 431 ~m~~ 434 (475)
T PLN02167 431 LMDG 434 (475)
T ss_pred HhcC
Confidence 9975
No 174
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=81.77 E-value=16 Score=38.52 Aligned_cols=110 Identities=16% Similarity=0.148 Sum_probs=63.0
Q ss_pred HHHHhCCCCCCCCcEEEEEcCc-ccccC--HHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC----ceEE-
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KARG- 461 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl-~~~Kg--~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~----~v~~- 461 (611)
+.+.+++.. .+..+++..|.- .+.|. .+.+.+.++.|.+.+++++++|+.. -.+..+++....+. ++..
T Consensus 170 ~~~~~~~~~-~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 170 TCAAFSLSS-ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred HHHHcCCCC-CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeec
Confidence 344444421 123345566553 35665 3456777777655678999998654 22334444433321 1222
Q ss_pred ecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 462 ~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
.+..+-.++..+++.||++|-.-. |..=+ |.|.|+|+|+--
T Consensus 247 ~g~~sL~el~ali~~a~l~I~nDT----Gp~Hl-AaA~g~P~valf 287 (348)
T PRK10916 247 AGETQLEQAVILIAACKAIVTNDS----GLMHV-AAALNRPLVALY 287 (348)
T ss_pred cCCCCHHHHHHHHHhCCEEEecCC----hHHHH-HHHhCCCEEEEE
Confidence 233345566689999999995543 33322 788999999753
No 175
>PLN02207 UDP-glycosyltransferase
Probab=81.64 E-value=30 Score=38.18 Aligned_cols=140 Identities=12% Similarity=0.072 Sum_probs=73.0
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCch-hHHHH-HHHHHHCCCceEEecccChHHHHHHHHH
Q 007247 401 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAG 476 (611)
Q Consensus 401 ~~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~~-~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 476 (611)
+..+.+..|.... .+-...++.+++.+ +..|+++=..+.. ..+.+ +.+....+++.... .|-.+. ++++.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~-~W~PQ~--~IL~H 348 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMIC-GWSPQV--EILAH 348 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEE-EeCCHH--HHhcc
Confidence 3456677787642 33455566666655 3355554322110 00001 12222223334333 443332 37888
Q ss_pred ccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccc-eecCcceEEecc-cccccccCCccCHHHHHHHHHHH
Q 007247 477 ADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRA 549 (611)
Q Consensus 477 aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~l~~~-~~~~~~~v~~~d~~~la~~i~~l 549 (611)
..+..+-++ || ++.+||+.+|+|+|+-...+ .... +++-+.|+-++. ...+ .-..-+.+++.++|+++
T Consensus 349 ~~vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~--~~~~v~~e~i~~av~~v 423 (468)
T PLN02207 349 KAVGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVH--SDEIVNANEIETAIRCV 423 (468)
T ss_pred cccceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccc--cCCcccHHHHHHHHHHH
Confidence 777666665 43 57899999999999976433 2232 222456663310 0000 00123678999999999
Q ss_pred HH
Q 007247 550 LA 551 (611)
Q Consensus 550 l~ 551 (611)
+.
T Consensus 424 m~ 425 (468)
T PLN02207 424 MN 425 (468)
T ss_pred Hh
Confidence 96
No 176
>PLN02173 UDP-glucosyl transferase family protein
Probab=81.02 E-value=27 Score=38.39 Aligned_cols=139 Identities=5% Similarity=0.022 Sum_probs=74.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 402 ~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
..+.+..|.... -..+.+.+.+.-|...++-.++-.+......+.+.+.. .++++.... |-.+ . .+++..++.+
T Consensus 265 svvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~~-W~PQ-~-~iL~H~~v~~ 338 (449)
T PLN02173 265 SVVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVLK-WSPQ-L-QVLSNKAIGC 338 (449)
T ss_pred ceEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEeC-CCCH-H-HHhCCCccce
Confidence 356777787653 23345555555553334333332111111111111111 134454443 4332 2 4888888777
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 482 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+-++. =.++++||+++|+|+|+-..-+ ....+.+. +.|+-+.. .+.+ ..-+.+++++++++++.+
T Consensus 339 FvtHc--GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~--~~~~--~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 339 FMTHC--GWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA--EKES--GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred EEecC--ccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee--cccC--CcccHHHHHHHHHHHhcC
Confidence 76762 2378999999999999976433 33344432 56665410 0000 012679999999999976
No 177
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=80.92 E-value=23 Score=39.23 Aligned_cols=135 Identities=9% Similarity=-0.056 Sum_probs=69.2
Q ss_pred CcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCc-------hhHHHHHHHHHHCCCceEEecccChHHHHH
Q 007247 402 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (611)
Q Consensus 402 ~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~-------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (611)
..+.+..|.+.. .+-+..++++++.. +..++++-..+. ...+.+++... +.++....+.+. . .
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ--~-~ 355 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKS---GVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGLVIRGWAPQ--V-A 355 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhC---CCcEEEEECCCcccccchhhCCHHHHHHhc--cCCEEecCCCCH--H-H
Confidence 356677787743 22255555555554 556665543211 01111111111 122332233333 2 4
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----ccccee-cCcceEEecccccccccCCccCHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~ 547 (611)
++....+.++-++ +=-++.+||+++|+|+|+-...+ ....+. +-+.|..+.. +. -..-+.+++++++.
T Consensus 356 vL~h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~---~~--~~~~~~~~v~~~v~ 428 (477)
T PLN02863 356 ILSHRAVGAFLTH--CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE---GA--DTVPDSDELARVFM 428 (477)
T ss_pred HhcCCCcCeEEec--CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc---CC--CCCcCHHHHHHHHH
Confidence 7776555444454 22358999999999999976432 333333 3367765410 00 01126789999999
Q ss_pred HHHH
Q 007247 548 RALA 551 (611)
Q Consensus 548 ~ll~ 551 (611)
+++.
T Consensus 429 ~~m~ 432 (477)
T PLN02863 429 ESVS 432 (477)
T ss_pred HHhh
Confidence 8884
No 178
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=80.61 E-value=2.6 Score=37.41 Aligned_cols=45 Identities=13% Similarity=0.040 Sum_probs=30.8
Q ss_pred HHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccccc
Q 007247 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
.+..++..+|+++--|..+..--.+-.++.+|+|+|+..+|.-.+
T Consensus 60 ~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 60 DLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDE 104 (124)
T ss_dssp -HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHH
T ss_pred hHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHH
Confidence 456788889999988865655556777888999999988887443
No 179
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=79.90 E-value=1.7 Score=41.85 Aligned_cols=39 Identities=31% Similarity=0.422 Sum_probs=28.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCc
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~ 130 (611)
||||+.+..- . .+.-+..|.++|.+.||+|+|++|...+
T Consensus 1 M~ILlTNDDG-i------~a~Gi~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDG-I------DAPGIRALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS--T------TSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred CeEEEEcCCC-C------CCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 8999998751 1 2223777999998888999999998543
No 180
>PLN00164 glucosyltransferase; Provisional
Probab=79.75 E-value=39 Score=37.43 Aligned_cols=75 Identities=16% Similarity=0.041 Sum_probs=47.8
Q ss_pred HHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccce-ecCcceEEecccccccccCCccCHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
.+++.+++..+-++ || ++.+||+.+|+|+|+-..-+ ....+ +.-+.|+.+... ...-..-+.++++++
T Consensus 351 ~iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~---~~~~~~~~~e~l~~a 424 (480)
T PLN00164 351 EILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVD---RKRDNFVEAAELERA 424 (480)
T ss_pred HHhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccc---cccCCcCcHHHHHHH
Confidence 47888887666665 33 58999999999999975432 33233 334667654100 000001367999999
Q ss_pred HHHHHHh
Q 007247 546 VRRALAT 552 (611)
Q Consensus 546 i~~ll~~ 552 (611)
|++++.+
T Consensus 425 v~~vm~~ 431 (480)
T PLN00164 425 VRSLMGG 431 (480)
T ss_pred HHHHhcC
Confidence 9999976
No 181
>PLN02208 glycosyltransferase family protein
Probab=79.73 E-value=54 Score=35.91 Aligned_cols=74 Identities=7% Similarity=0.046 Sum_probs=49.3
Q ss_pred HHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccceec-CcceEEecccccccccCCccCHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
++++...+.++-++ || ++++||+.+|+|+|+-..-+ ....+.+ -+.|..+..- .+ ..-+.++++++
T Consensus 323 ~iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-~~----~~~~~~~l~~a 394 (442)
T PLN02208 323 LILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE-KT----GWFSKESLSNA 394 (442)
T ss_pred HHhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc-cC----CcCcHHHHHHH
Confidence 47888888777776 44 58999999999999976432 2333333 4567655100 00 01377999999
Q ss_pred HHHHHHhc
Q 007247 546 VRRALATY 553 (611)
Q Consensus 546 i~~ll~~~ 553 (611)
|++++++.
T Consensus 395 i~~~m~~~ 402 (442)
T PLN02208 395 IKSVMDKD 402 (442)
T ss_pred HHHHhcCC
Confidence 99999763
No 182
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=79.08 E-value=32 Score=36.49 Aligned_cols=169 Identities=15% Similarity=0.166 Sum_probs=104.4
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC-----chhHHHHHHHHHH-CCCceEEeccc-----ChHHHHH
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEIL-YPEKARGVAKF-----NIPLAHM 472 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~-----~~~~~~l~~l~~~-~~~~v~~~~~~-----~~~~~~~ 472 (611)
.|=|.|..++.+=..++.+.+.+++++++.++|+-+.- ..+.+.+.+.... .|+++.++..- ..++...
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 45677788999999999999999999999999998842 2233444444433 47777765432 1233333
Q ss_pred HHHHccE--EEeCCCC----CCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 473 IIAGADF--ILIPSRF----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 473 i~~~aDv--~l~pS~~----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
+=...|+ ++++-.. -|.-++..+ +.++|||--.+|-..|-++.-..-- | -..+.--+|++.|.+.+
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~----F--vsrlLGmGDi~glvek~ 307 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKP----F--VSRLLGMGDIEGLVEKV 307 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHH----H--HHHHhccccHHHHHHHH
Confidence 4455565 3444332 234444444 5799999888876655554211100 0 00112458889999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007247 547 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 584 (611)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (611)
.++..+. .+ ++..+...-+|+...+.+++..++.
T Consensus 308 ~ev~~~d-~~---el~~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 308 QEVGKDD-AK---ELVEKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHhhhh-HH---HHHHHHHhCCccHHHHHHHHHHHHh
Confidence 9887431 22 2333444568999999888887764
No 183
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=78.27 E-value=11 Score=41.92 Aligned_cols=160 Identities=14% Similarity=0.108 Sum_probs=99.1
Q ss_pred cEEEEEcCcc-cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEE
Q 007247 403 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (611)
Q Consensus 403 ~~il~iGrl~-~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l 481 (611)
...+..|.-. -.||-+..++++.+.. +++-.|.+... .. ...|.-|..++..+.+...++++.+.++|
T Consensus 278 ~~AlVyGK~~~~w~~k~~~l~~l~~~~--eih~tV~~~~~--~~-------~~~P~~V~NHG~l~~~ef~~lL~~akvfi 346 (559)
T PF15024_consen 278 NQALVYGKERYMWKGKEKYLDVLHKYM--EIHGTVYDEPQ--RP-------PNVPSFVKNHGILSGDEFQQLLRKAKVFI 346 (559)
T ss_pred ceeEEEccchhhhcCcHHHHHHHHhhc--EEEEEeccCCC--CC-------cccchhhhhcCcCCHHHHHHHHHhhhEee
Confidence 4445555543 4778888888887763 45544443322 01 11233345567778888889999999999
Q ss_pred eCCC-CCCCcHHHHHHHHcCCceEEcCCcccc-----cceecCcc-----------eEEecccccccccCCccCHHHHHH
Q 007247 482 IPSR-FEPCGLIQLHAMRYGTVPIVASTGGLV-----DTVEEGFT-----------GFQMGSFSVDCEAVDPVDVAAVST 544 (611)
Q Consensus 482 ~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~-----e~v~~g~~-----------G~l~~~~~~~~~~v~~~d~~~la~ 544 (611)
--.. +| |=+.+||++.|+|.|-....... +...+.-+ --.+|..+| ..|+-+|.+++-+
T Consensus 347 GlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhV--ytVd~~n~~~v~~ 422 (559)
T PF15024_consen 347 GLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHV--YTVDINNSTEVEA 422 (559)
T ss_pred ecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeE--EEEcCCCHHHHHH
Confidence 5443 34 45789999999998887643211 11111000 001222222 2569999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007247 545 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 585 (611)
Q Consensus 545 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (611)
+|++++++. . .-.+--.||-+.+.+++..+++.
T Consensus 423 Avk~il~~~-v-------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 423 AVKAILATP-V-------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred HHHHHHhcC-C-------CCcCCcccCHHHHHHHHHHHHHh
Confidence 999999973 1 11223578888888888777764
No 184
>PLN02764 glycosyltransferase family protein
Probab=77.67 E-value=31 Score=37.87 Aligned_cols=74 Identities=5% Similarity=-0.041 Sum_probs=47.6
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----ccccee-cCcceEEecccccccccCCccCHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
++++...+.++-++ +=.++.+||+.+|+|+|+-...+ ....+. +-+.|+.+..- + ...-+.+++.+++
T Consensus 329 ~vL~h~~v~~FvtH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~--~---~~~~~~e~i~~av 401 (453)
T PLN02764 329 LILSHPSVGCFVSH--CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE--E---TGWFSKESLRDAI 401 (453)
T ss_pred HHhcCcccCeEEec--CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccc--c---CCccCHHHHHHHH
Confidence 37877766555555 22368999999999999976543 333443 33556643100 0 0023789999999
Q ss_pred HHHHHh
Q 007247 547 RRALAT 552 (611)
Q Consensus 547 ~~ll~~ 552 (611)
++++++
T Consensus 402 ~~vm~~ 407 (453)
T PLN02764 402 NSVMKR 407 (453)
T ss_pred HHHhcC
Confidence 999976
No 185
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=77.38 E-value=42 Score=36.91 Aligned_cols=138 Identities=11% Similarity=0.041 Sum_probs=75.7
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEE-eCC-C------chhH---HHHHHHHHHCCCceEEecccChH
Q 007247 402 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTG-K------KPME---KQLEQLEILYPEKARGVAKFNIP 468 (611)
Q Consensus 402 ~~~il~iGrl~--~~Kg~d~li~a~~~l~~~~~~lviv-G~g-~------~~~~---~~l~~l~~~~~~~v~~~~~~~~~ 468 (611)
..+.+..|.+. ..+-.+.+..+++.+. ..|+++ .+. . .... ...+.+....+++.... .|-.+
T Consensus 262 sVvyvsfGS~~~l~~~q~~ela~gL~~s~---~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~-~W~PQ 337 (455)
T PLN02152 262 SVIYVSFGTMVELSKKQIEELARALIEGK---RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV-SWCSQ 337 (455)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHcC---CCeEEEEecCcccccccccccccccccchhHHHhccCCeEEE-eeCCH
Confidence 45677778765 3455666777777663 245443 221 0 0000 01122322333444333 34332
Q ss_pred HHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHH
Q 007247 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVS 543 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la 543 (611)
. ++++..++.++-++. =.++++||+.+|+|+|+-...+ ....+.+. +.|+-+.. + .-+.-+.++++
T Consensus 338 -~-~iL~h~~vg~fvtH~--G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~---~--~~~~~~~e~l~ 408 (455)
T PLN02152 338 -I-EVLRHRAVGCFVTHC--GWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRE---N--SEGLVERGEIR 408 (455)
T ss_pred -H-HHhCCcccceEEeeC--CcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeec---C--cCCcCcHHHHH
Confidence 2 488888887776762 2358999999999999875432 22333331 34554310 0 00123679999
Q ss_pred HHHHHHHHh
Q 007247 544 TTVRRALAT 552 (611)
Q Consensus 544 ~~i~~ll~~ 552 (611)
++|++++++
T Consensus 409 ~av~~vm~~ 417 (455)
T PLN02152 409 RCLEAVMEE 417 (455)
T ss_pred HHHHHHHhh
Confidence 999999975
No 186
>PLN03004 UDP-glycosyltransferase
Probab=77.23 E-value=34 Score=37.58 Aligned_cols=139 Identities=10% Similarity=-0.065 Sum_probs=76.4
Q ss_pred CCcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCCc-------hhHHHH-HHHHHHC-CCceEEecccChHH
Q 007247 401 NIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQL-EQLEILY-PEKARGVAKFNIPL 469 (611)
Q Consensus 401 ~~~~il~iGrl~--~~Kg~d~li~a~~~l~~~~~~lvivG~g~~-------~~~~~l-~~l~~~~-~~~v~~~~~~~~~~ 469 (611)
+..+.+..|... +.+-...|..+++.. +..|+++=..+. .....+ +.+..+. +.++....+.+..
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~- 345 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQV- 345 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHH-
Confidence 345677778873 244455666666655 235555444221 011101 0111111 1234333333332
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCc----cccccee-cCcceEEecccccccccCCccCHHHHHH
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVST 544 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~ 544 (611)
.+++.+++..+-++. =-++.+||+++|+|+|+-... .....+. +-+.|..+..- + -..-+.+++++
T Consensus 346 --~iL~H~~v~~FvTH~--G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~--~---~~~~~~e~l~~ 416 (451)
T PLN03004 346 --PVLNHKAVGGFVTHC--GWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES--E---TGFVSSTEVEK 416 (451)
T ss_pred --HHhCCCccceEeccC--cchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC--c---CCccCHHHHHH
Confidence 389999986666662 235899999999999997643 3344443 33677765100 0 00237799999
Q ss_pred HHHHHHHh
Q 007247 545 TVRRALAT 552 (611)
Q Consensus 545 ~i~~ll~~ 552 (611)
+|++++.+
T Consensus 417 av~~vm~~ 424 (451)
T PLN03004 417 RVQEIIGE 424 (451)
T ss_pred HHHHHhcC
Confidence 99999975
No 187
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=76.15 E-value=23 Score=36.75 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=60.5
Q ss_pred cEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEE
Q 007247 403 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (611)
Q Consensus 403 ~~il~iGrl~~~Kg~--d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 480 (611)
.+++..|.-.+.|.+ +...+.+..+.+.+.++++.|+++. -.+..+++....+ .+...+..+-.++..+++.||++
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l~ 257 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKAV 257 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCEE
Confidence 333444543445653 4677777777656788888643432 2334455544333 23334455666677899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCc
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~~g 509 (611)
|-.-. |.. ==|-++|+|+|+--.+
T Consensus 258 I~nDS----Gp~-HlA~A~g~p~valfGp 281 (322)
T PRK10964 258 VSVDT----GLS-HLTAALDRPNITLYGP 281 (322)
T ss_pred EecCC----cHH-HHHHHhCCCEEEEECC
Confidence 96543 333 3378999999986543
No 188
>PLN02554 UDP-glycosyltransferase family protein
Probab=75.98 E-value=50 Score=36.62 Aligned_cols=141 Identities=12% Similarity=0.110 Sum_probs=72.0
Q ss_pred CcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCc------------hhHHH-HHHHHHHCCCceEEecccC
Q 007247 402 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKK------------PMEKQ-LEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 402 ~~~il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~------------~~~~~-l~~l~~~~~~~v~~~~~~~ 466 (611)
..+++..|.+.. .+-+..++.+++.+ +.+++++-.++. ...+. -+......+++.... .|-
T Consensus 275 svvyvsfGS~~~~~~~~~~~la~~l~~~---~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~-~W~ 350 (481)
T PLN02554 275 SVVFLCFGSMGGFSEEQAREIAIALERS---GHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVI-GWA 350 (481)
T ss_pred cEEEEeccccccCCHHHHHHHHHHHHHc---CCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEE-eeC
Confidence 356677888642 44566666666665 345555432210 00011 011111122333333 332
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cc-cceecCcceEEeccc-cccc--ccCCcc
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LV-DTVEEGFTGFQMGSF-SVDC--EAVDPV 537 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~-e~v~~g~~G~l~~~~-~~~~--~~v~~~ 537 (611)
.+. .+++...+-++-++ || ++++||+.+|+|.|+-...+ .. ..++.-+.|..+..- ..+- ..-..-
T Consensus 351 PQ~--~iL~H~~v~~FvtH---~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~ 425 (481)
T PLN02554 351 PQV--AVLAKPAIGGFVTH---CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETV 425 (481)
T ss_pred CHH--HHhCCcccCccccc---CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeE
Confidence 222 37755555444454 33 58999999999999976432 22 234444567654100 0000 000123
Q ss_pred CHHHHHHHHHHHHH
Q 007247 538 DVAAVSTTVRRALA 551 (611)
Q Consensus 538 d~~~la~~i~~ll~ 551 (611)
+.+++.++|++++.
T Consensus 426 ~~e~l~~av~~vm~ 439 (481)
T PLN02554 426 TAEEIERGIRCLME 439 (481)
T ss_pred cHHHHHHHHHHHhc
Confidence 68999999999996
No 189
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=75.76 E-value=9.2 Score=39.11 Aligned_cols=68 Identities=16% Similarity=0.250 Sum_probs=48.5
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCC---cccccceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST---GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~---gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
..+.|+.+.+.++|.-..++..-++|||++||.+|.... -.+.|+++-....+.+ +..+..++.+.|
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v----------~~~~~~~l~~iL 299 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRV----------PEADLPELPEIL 299 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEE----------CHHHHHHHHHHH
Confidence 556899999999988777788999999999997666432 2355566444445544 777776666555
Q ss_pred H
Q 007247 547 R 547 (611)
Q Consensus 547 ~ 547 (611)
+
T Consensus 300 ~ 300 (302)
T PF03016_consen 300 R 300 (302)
T ss_pred h
Confidence 4
No 190
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=75.07 E-value=3.3 Score=36.45 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=25.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||+|+-. |....-=..+....|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999986 33111112345667999999999999999876
No 191
>PLN02555 limonoid glucosyltransferase
Probab=74.80 E-value=70 Score=35.48 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=44.9
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccceecC-cceEEecccccccccCCccCHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~i~ 547 (611)
+++...+-.+-++. =-++.+||+.+|+|+|+-..-+ ....+.+. +.|+.++.-..+ -..-+.++++++|+
T Consensus 350 iL~H~~v~~FvtH~--G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~---~~~v~~~~v~~~v~ 424 (480)
T PLN02555 350 VLAHPSVACFVTHC--GWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAE---NKLITREEVAECLL 424 (480)
T ss_pred HhCCCccCeEEecC--CcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccc---cCcCcHHHHHHHHH
Confidence 67554444444442 2368999999999999976432 33333343 667654200000 01125789999999
Q ss_pred HHHHh
Q 007247 548 RALAT 552 (611)
Q Consensus 548 ~ll~~ 552 (611)
+++.+
T Consensus 425 ~vm~~ 429 (480)
T PLN02555 425 EATVG 429 (480)
T ss_pred HHhcC
Confidence 99965
No 192
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=73.24 E-value=29 Score=38.26 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=54.2
Q ss_pred HHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCc-eEEcCC--cccccceecCcceEEecccccccccCCccCHHHHHHH
Q 007247 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV-PIVAST--GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~P-vI~s~~--gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
...+.++.+.+.|.|.-.+...-.+.||+.+||. ||.++. ....++++-..-.+.+ +..++...
T Consensus 336 ~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v----------~~~~v~~~--- 402 (464)
T KOG1021|consen 336 NYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFV----------PEKDVPEL--- 402 (464)
T ss_pred hHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEE----------EHHHhhhH---
Confidence 3557999999999999999888899999999985 555653 3445555444334433 43344444
Q ss_pred HHHHHHhcCHHHHHHHHHHH
Q 007247 546 VRRALATYGTQALAEMMKNG 565 (611)
Q Consensus 546 i~~ll~~~~~~~~~~~~~~~ 565 (611)
|+++|..-...++..|..+.
T Consensus 403 ~~~iL~~i~~~~~~~m~~~v 422 (464)
T KOG1021|consen 403 IKNILLSIPEEEVLRMRENV 422 (464)
T ss_pred HHHHHHhcCHHHHHHHHHHH
Confidence 56666553344555555444
No 193
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=70.38 E-value=93 Score=34.51 Aligned_cols=73 Identities=11% Similarity=-0.037 Sum_probs=48.2
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccce-ecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
.+++...+..+-++ +=.++.+||+.+|+|+|+-...+ ....+ +.-+.|..+... -..-+.++++++|
T Consensus 350 ~iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~------~~~~~~~~l~~av 421 (481)
T PLN02992 350 EILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP------KEVISRSKIEALV 421 (481)
T ss_pred HHhCCcccCeeEec--CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC------CCcccHHHHHHHH
Confidence 37888887555555 22358999999999999986543 33344 344567654100 0124779999999
Q ss_pred HHHHHh
Q 007247 547 RRALAT 552 (611)
Q Consensus 547 ~~ll~~ 552 (611)
.+++.+
T Consensus 422 ~~vm~~ 427 (481)
T PLN02992 422 RKVMVE 427 (481)
T ss_pred HHHhcC
Confidence 999975
No 194
>PLN00414 glycosyltransferase family protein
Probab=67.17 E-value=1.2e+02 Score=33.32 Aligned_cols=74 Identities=7% Similarity=-0.044 Sum_probs=48.4
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----cccce-ecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
.+++.+.+..+-++. =.++.+||+.+|+|+|+-...+ ....+ ++-+.|..+..- .+ ..-+.+++++++
T Consensus 324 ~vL~h~~v~~fvtH~--G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~-~~----~~~~~~~i~~~v 396 (446)
T PLN00414 324 LILSHPSVGCFVNHC--GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE-DS----GWFSKESLRDTV 396 (446)
T ss_pred HHhcCCccceEEecC--chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc-cC----CccCHHHHHHHH
Confidence 378888665555551 2368999999999999976433 33344 344677655100 00 024789999999
Q ss_pred HHHHHh
Q 007247 547 RRALAT 552 (611)
Q Consensus 547 ~~ll~~ 552 (611)
++++.+
T Consensus 397 ~~~m~~ 402 (446)
T PLN00414 397 KSVMDK 402 (446)
T ss_pred HHHhcC
Confidence 999976
No 195
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=66.03 E-value=8.7 Score=34.32 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=29.6
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeE-EEEe
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIA 125 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V-~vit 125 (611)
|||+++... +|+ .+-..+-...++.++.+.||+| .|+-
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf 39 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFF 39 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEE
Confidence 899999876 676 4445567788999999999995 6664
No 196
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=65.87 E-value=58 Score=31.63 Aligned_cols=119 Identities=19% Similarity=0.291 Sum_probs=66.5
Q ss_pred CcEEEEEcCc-ccccCHHHHHHHHHhcccCC--cEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 402 IPVIGFIGRL-EEQKGSDILAAAIPHFIKEN--VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 402 ~~~il~iGrl-~~~Kg~d~li~a~~~l~~~~--~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
-.+++|+|.- .+.+. .|++.+++|++.+ +.+|..|....+ .+.+..+......+ =.++.
T Consensus 108 ~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~~~~-~e~l~~fida~N~~---------------~~gsh 169 (259)
T KOG2884|consen 108 QRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEAENN-TEKLFEFIDALNGK---------------GDGSH 169 (259)
T ss_pred eEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEecccccc-HHHHHHHHHHhcCC---------------CCCce
Confidence 3578999984 44443 7788888887754 556666654432 23344443322110 12355
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 479 v~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
++.+|+- + +|+=...-.|+|.-+.|+..--..-.++-|-| . |+|.+--+||.+|+--++.
T Consensus 170 lv~Vppg----~--~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~f---g-----vdp~~DPELAlALRlSMEE 229 (259)
T KOG2884|consen 170 LVSVPPG----P--LLSDALLSSPIIQGEDGGAAAGLGANGMDFEF---G-----VDPEDDPELALALRLSMEE 229 (259)
T ss_pred EEEeCCC----c--cHHHHhhcCceeccCccccccccccccccccc---C-----CCcccCHHHHHHHHhhHHH
Confidence 6666653 1 44444556788887755433323222223322 2 3777777999999877764
No 197
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=65.63 E-value=7.3 Score=34.66 Aligned_cols=27 Identities=30% Similarity=0.282 Sum_probs=19.6
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+|-=.=...|+++|.++||+|.+.++.
T Consensus 9 ~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 9 RGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp HHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred hhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 343334556999999999999988865
No 198
>PLN00016 RNA-binding protein; Provisional
Probab=64.70 E-value=7.3 Score=41.58 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=29.9
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+|||++++.. .||.|.+-..|++.|.++||+|++++..
T Consensus 52 ~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 4788887653 4667766677999999999999999865
No 199
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=61.47 E-value=54 Score=30.76 Aligned_cols=101 Identities=24% Similarity=0.341 Sum_probs=63.4
Q ss_pred ccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC-ceEE--ecccChHHHH---HHH--HHccEEEeC
Q 007247 412 EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARG--VAKFNIPLAH---MII--AGADFILIP 483 (611)
Q Consensus 412 ~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~--~~~~~~~~~~---~i~--~~aDv~l~p 483 (611)
+..-|.|++.+.++...+++.++.++|+.++..++..+.+...+|+ ++.+ .+.|..+... ..+ .++|++++.
T Consensus 27 ~r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vg 106 (171)
T cd06533 27 ERVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVG 106 (171)
T ss_pred cccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEE
Confidence 3456899999999998777899999998887777778888888885 3333 2234332222 222 456888764
Q ss_pred C---CCCCCcHHHHHHHHcCCceEEcCCcccccce
Q 007247 484 S---RFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 515 (611)
Q Consensus 484 S---~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v 515 (611)
- ..|-|-....+.+ ..+++.+ .||.-|+.
T Consensus 107 lG~PkQE~~~~~~~~~l--~~~v~~~-vG~~~d~~ 138 (171)
T cd06533 107 LGAPKQELWIARHKDRL--PVPVAIG-VGGSFDFL 138 (171)
T ss_pred CCCCHHHHHHHHHHHHC--CCCEEEE-eceeeEec
Confidence 4 2354444444433 3444443 67666655
No 200
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=61.17 E-value=65 Score=30.70 Aligned_cols=39 Identities=15% Similarity=0.091 Sum_probs=27.5
Q ss_pred hHhHHHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeC
Q 007247 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355 (611)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N 355 (611)
.+.+..+...|.|++.|+..++.+.+ .|++.+ ++.+..|
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~---lG~~~~------~v~v~Gn 179 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRK---LGAPPE------RVHVTGN 179 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHT---TT-S--------SEEE---
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcc------eEEEeCc
Confidence 46677888999999999999999997 787755 6777665
No 201
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=60.41 E-value=40 Score=31.94 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=61.6
Q ss_pred cCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCC-ceEEe-cccChHHHHH---HH--HHccEEEeCC---
Q 007247 415 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV-AKFNIPLAHM---II--AGADFILIPS--- 484 (611)
Q Consensus 415 Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~-~~~~~~~~~~---i~--~~aDv~l~pS--- 484 (611)
-|.|++.+.++...+.+.++.++|..+...++..+.+..++|+ ++.+. +.|+.+.... -+ .++|++++--
T Consensus 32 ~G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~P 111 (177)
T TIGR00696 32 AGPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCP 111 (177)
T ss_pred ChHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 3889999999888667899999999887788888899999985 33333 4454332222 22 4678877643
Q ss_pred CCCCCcHHHHHHHHcCCceEEcCCccccccee
Q 007247 485 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 516 (611)
Q Consensus 485 ~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 516 (611)
+.|-|-... .-....+++ -.+||.-|+..
T Consensus 112 kQE~~~~~~--~~~~~~~v~-~gvGg~fd~~a 140 (177)
T TIGR00696 112 KQEIWMRNH--RHLKPDAVM-IGVGGSFDVFS 140 (177)
T ss_pred HhHHHHHHh--HHhCCCcEE-EEeceeeeecc
Confidence 234332211 112233343 34788777663
No 202
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=59.87 E-value=49 Score=31.03 Aligned_cols=103 Identities=20% Similarity=0.279 Sum_probs=63.8
Q ss_pred cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEe----cccChHHHHHHH-----HHccEEEeC
Q 007247 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV----AKFNIPLAHMII-----AGADFILIP 483 (611)
Q Consensus 413 ~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~----~~~~~~~~~~i~-----~~aDv~l~p 483 (611)
..-|.|++.+.+....+++.++.++|+.+...++..+.+...+|+ +... +.|+.+....++ .++|++++-
T Consensus 30 rv~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~-l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vg 108 (172)
T PF03808_consen 30 RVTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPG-LRIVGYHHGYFDEEEEEAIINRINASGPDIVFVG 108 (172)
T ss_pred ccCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCC-eEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEE
Confidence 357889999999888777899999998887778888888899985 3333 234434444333 567888765
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCccccccee
Q 007247 484 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 516 (611)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 516 (611)
.-.--.-.-+.+-....-+.|.-..||.-++..
T Consensus 109 lG~PkQE~~~~~~~~~l~~~v~i~vG~~~d~~a 141 (172)
T PF03808_consen 109 LGAPKQERWIARHRQRLPAGVIIGVGGAFDFLA 141 (172)
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECchhhhhc
Confidence 432111112222222222236666777777664
No 203
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=58.60 E-value=12 Score=35.66 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=26.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++|+.. |-+| ..++++..++||+|+.|..+
T Consensus 1 mKIaiIgAs-------G~~G---s~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 1 MKIAIIGAS-------GKAG---SRILKEALKRGHEVTAIVRN 33 (211)
T ss_pred CeEEEEecC-------chhH---HHHHHHHHhCCCeeEEEEeC
Confidence 899999863 3233 45788889999999999866
No 204
>PLN02534 UDP-glycosyltransferase
Probab=57.78 E-value=2.7e+02 Score=31.03 Aligned_cols=78 Identities=14% Similarity=0.021 Sum_probs=46.5
Q ss_pred HHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc----ccc-ceecCcceEEeccc-ccccccCC----ccCHHH
Q 007247 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSF-SVDCEAVD----PVDVAA 541 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~l~~~~-~~~~~~v~----~~d~~~ 541 (611)
.+++..++.++-++ +=.++++||+.+|+|+|+-...+ ... +++.-+.|+-+|.- ..+...-+ .-+.++
T Consensus 356 ~iL~h~~v~~fvtH--~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~ee 433 (491)
T PLN02534 356 LILSHPAIGGFLTH--CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDE 433 (491)
T ss_pred HHhcCCccceEEec--CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHH
Confidence 47888888665565 23468999999999999976533 111 22233455544200 00000000 136789
Q ss_pred HHHHHHHHHH
Q 007247 542 VSTTVRRALA 551 (611)
Q Consensus 542 la~~i~~ll~ 551 (611)
++++|++++.
T Consensus 434 v~~~v~~~m~ 443 (491)
T PLN02534 434 VEKAVKTLMD 443 (491)
T ss_pred HHHHHHHHhc
Confidence 9999999996
No 205
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=57.67 E-value=1.1e+02 Score=29.78 Aligned_cols=106 Identities=15% Similarity=0.103 Sum_probs=63.7
Q ss_pred EEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHH---HHHHHHHHC-CCceEEecccChHHHHHHHHHcc
Q 007247 405 IGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEK---QLEQLEILY-PEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 405 il~iGrl~~--~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~---~l~~l~~~~-~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
++.-|.... ..+.+.+.+.+.++..++.+++++.+......+ .+.+.-.+. +-.+.....++.+...+.+..||
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad 82 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEAD 82 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCC
Confidence 444444443 456777888877776667899999997643333 333333344 32333332233344456889999
Q ss_pred EEEeCCC--------CCCCcH--HHHHHHHcCCceEEcCCcc
Q 007247 479 FILIPSR--------FEPCGL--IQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 479 v~l~pS~--------~E~~gl--~~lEAma~G~PvI~s~~gg 510 (611)
++++|-= +...++ .+-++...|+|++.+..|.
T Consensus 83 ~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 83 VIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred EEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 9999861 112232 3455666799999888664
No 206
>PRK09739 hypothetical protein; Provisional
Probab=56.13 E-value=18 Score=34.81 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=31.2
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|+.|||++|... |. ..+-...+...+...+.+.||+|+++-..
T Consensus 1 ~~mmkiliI~~s--p~-~~s~s~~l~~~~~~~~~~~g~~v~~~dL~ 43 (199)
T PRK09739 1 MQSMRIYLVWAH--PR-HDSLTAKVAEAIHQRAQERGHQVEELDLY 43 (199)
T ss_pred CCCceEEEEEcC--CC-CCCcHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 346899999975 54 23335566777888888899999988643
No 207
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=55.58 E-value=9.2 Score=42.10 Aligned_cols=138 Identities=21% Similarity=0.199 Sum_probs=90.4
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHH----HHHHHHhccc-C----CcEEEEEeCCC-c--hhHHHHHHHHH---
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDI----LAAAIPHFIK-E----NVQIIVLGTGK-K--PMEKQLEQLEI--- 453 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~----li~a~~~l~~-~----~~~lvivG~g~-~--~~~~~l~~l~~--- 453 (611)
-+.+++|...+++.-.=+.+-|+.++|.... ++-.+.++++ + -.+.+|+|+-. + .+-+++-+|..
T Consensus 550 ~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~ 629 (843)
T KOG2099|consen 550 YLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVA 629 (843)
T ss_pred HHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHHHHHHHHHHHHHH
Confidence 3556677665554433456789999886443 3344455554 2 23556777532 2 12233333322
Q ss_pred ----HCC-----CceEEecccChHHHHHHHHHccEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCcccccceec--Ccc
Q 007247 454 ----LYP-----EKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFT 520 (611)
Q Consensus 454 ----~~~-----~~v~~~~~~~~~~~~~i~~~aDv~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~ 520 (611)
..| -++.++..+...++..++-++|+-=.-|. .|..|..=+.-|..|+.+|.|-.|..+|+-++ .+|
T Consensus 630 dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN 709 (843)
T KOG2099|consen 630 DVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEEN 709 (843)
T ss_pred HHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCccc
Confidence 111 25777778888888889999998655554 48888888888999999999999998888775 357
Q ss_pred eEEecc
Q 007247 521 GFQMGS 526 (611)
Q Consensus 521 G~l~~~ 526 (611)
-|+||.
T Consensus 710 ~FiFG~ 715 (843)
T KOG2099|consen 710 FFIFGM 715 (843)
T ss_pred EEEecc
Confidence 788873
No 208
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=54.13 E-value=17 Score=32.97 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=31.6
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++|+.. |. +.|-...++..++..+.+.|++|.++-..
T Consensus 1 Mkilii~gS--~r-~~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGS--PR-KNSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESS--SS-TTSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECc--CC-CCCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 899999875 32 35777778888888899999999999765
No 209
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=53.98 E-value=1.2e+02 Score=28.44 Aligned_cols=37 Identities=19% Similarity=0.404 Sum_probs=25.8
Q ss_pred CCCeEEEecCCccchHHHHHHHhccCCCCCCCceEEEEE
Q 007247 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 265 (611)
Q Consensus 227 ~~Dvivh~hd~~~~~~~~~l~~~~~~~~~~~~~k~v~~i 265 (611)
+|| +|.++...++...+++.+..+.-++ .++|+||.-
T Consensus 92 rPd-vii~nGpg~~vp~~~~~~l~~~~~~-~~~kiIyIE 128 (170)
T PF08660_consen 92 RPD-VIISNGPGTCVPVCLAAKLLRLLGL-RGSKIIYIE 128 (170)
T ss_pred CCC-EEEEcCCceeeHHHHHHHHHHHhhc-cCCcEEEEE
Confidence 799 8999988887777776665433332 278888764
No 210
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=53.67 E-value=49 Score=31.16 Aligned_cols=81 Identities=21% Similarity=0.309 Sum_probs=48.6
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChH------------HHHHHHHHccEEEe--CCCCCC---CcHHH
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP------------LAHMIIAGADFILI--PSRFEP---CGLIQ 493 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~------------~~~~i~~~aDv~l~--pS~~E~---~gl~~ 493 (611)
+-++-|+|-|. .-+.+.++.+.++-++..+-....+ .+.++++.||++++ |..-|+ ++-..
T Consensus 36 g~tvgIiG~G~--IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~~~ 113 (178)
T PF02826_consen 36 GKTVGIIGYGR--IGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINAEF 113 (178)
T ss_dssp TSEEEEESTSH--HHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSHHH
T ss_pred CCEEEEEEEcC--CcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeeeee
Confidence 45555666655 4555555555554444444333222 23468999999876 444455 45579
Q ss_pred HHHHHcCCceEEcCCccccc
Q 007247 494 LHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 494 lEAma~G~PvI~s~~gg~~e 513 (611)
++.|--|.-+|.+.-|++.+
T Consensus 114 l~~mk~ga~lvN~aRG~~vd 133 (178)
T PF02826_consen 114 LAKMKPGAVLVNVARGELVD 133 (178)
T ss_dssp HHTSTTTEEEEESSSGGGB-
T ss_pred eeccccceEEEeccchhhhh
Confidence 99999999888888776544
No 211
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=53.57 E-value=2.1e+02 Score=27.33 Aligned_cols=110 Identities=9% Similarity=0.068 Sum_probs=64.3
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHHHHHH--HccEEEeCCCCCC----CcHHHHHHHHc---C
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIA--GADFILIPSRFEP----CGLIQLHAMRY---G 500 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~~--~aDv~l~pS~~E~----~gl~~lEAma~---G 500 (611)
+++++|+.+.+ .....++.+....+. +.....+ +.+.....+. ..|++++-....+ .|+-+++.+.. .
T Consensus 3 ~~~Ilivdd~~-~~~~~l~~~L~~~~~-~~~v~~~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~ 80 (216)
T PRK10840 3 NMNVIIADDHP-IVLFGIRKSLEQIEW-VNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPS 80 (216)
T ss_pred ceEEEEECCcH-HHHHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCC
Confidence 45677777654 344455555444332 2222222 3333333333 4798888654433 57777777653 4
Q ss_pred CceEEc-CCcc---cccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 501 TVPIVA-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 501 ~PvI~s-~~gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
+|+|+- .... ..+.+..|..||+. .+.+++++.++|..++..
T Consensus 81 ~~iIvls~~~~~~~~~~a~~~Ga~~yl~----------K~~~~~~l~~ai~~v~~g 126 (216)
T PRK10840 81 LSIIVLTMNNNPAILSAVLDLDIEGIVL----------KQGAPTDLPKALAALQKG 126 (216)
T ss_pred CcEEEEEecCCHHHHHHHHHCCCeEEEE----------CCCCHHHHHHHHHHHHCC
Confidence 566553 3322 22345678889987 888999999999988764
No 212
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=53.30 E-value=44 Score=34.95 Aligned_cols=81 Identities=25% Similarity=0.400 Sum_probs=54.3
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccCh------------HHHHHHHHHccEEEe--CCCCCCCcH---HH
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILI--PSRFEPCGL---IQ 493 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~------------~~~~~i~~~aDv~l~--pS~~E~~gl---~~ 493 (611)
+-.+-|+|-|. +-+.+.+..+.++-++..+-.+.. +.+..+++.||++.+ |..-|+-|+ ..
T Consensus 142 gkTvGIiG~G~--IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~ 219 (324)
T COG0111 142 GKTVGIIGLGR--IGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINAEE 219 (324)
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCHHH
Confidence 45667777776 666666666666655555544322 236689999999765 666687666 47
Q ss_pred HHHHHcCCceEEcCCccccc
Q 007247 494 LHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 494 lEAma~G~PvI~s~~gg~~e 513 (611)
+..|--|.-.|-+.-|++.+
T Consensus 220 ~a~MK~gailIN~aRG~vVd 239 (324)
T COG0111 220 LAKMKPGAILINAARGGVVD 239 (324)
T ss_pred HhhCCCCeEEEECCCcceec
Confidence 77777788777777777554
No 213
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=52.85 E-value=15 Score=38.04 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=27.2
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|+.|||++|+. |++|.+ ++..|++.||+|++++..
T Consensus 3 ~~~m~I~IiG~--------GaiG~~---lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIGT--------GAIGGF---YGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEECC--------CHHHHH---HHHHHHHCCCeEEEEEeC
Confidence 45699999973 666644 566789999999999864
No 214
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=52.24 E-value=18 Score=33.46 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=31.5
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
||+|++-+. ..|-.+.....+|..|.+.||+|.+.-.
T Consensus 1 Mk~LIlYst-----r~GqT~kIA~~iA~~L~e~g~qvdi~dl 37 (175)
T COG4635 1 MKTLILYST-----RDGQTRKIAEYIASHLRESGIQVDIQDL 37 (175)
T ss_pred CceEEEEec-----CCCcHHHHHHHHHHHhhhcCCeeeeeeh
Confidence 788888653 4688899999999999999999999843
No 215
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=51.28 E-value=1.9e+02 Score=26.69 Aligned_cols=108 Identities=18% Similarity=0.191 Sum_probs=62.9
Q ss_pred EEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHHHHH--HHccEEEeCCCC-CCCcHHHHHHHHcCCceEEcCC
Q 007247 433 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 433 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~--~~aDv~l~pS~~-E~~gl~~lEAma~G~PvI~s~~ 508 (611)
+++|+.+.+ .....+++.....++ ....... +.......+ ...|++++-... +.-|..+++.+....|+|+...
T Consensus 3 ~ilivd~~~-~~~~~l~~~L~~~~~-~~~~~~~~~~~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~ 80 (196)
T PRK10360 3 TVALIDDHL-IVRSGFAQLLGLEPD-LQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV 80 (196)
T ss_pred EEEEECCcH-HHHHHHHHHHccCCC-cEEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEEC
Confidence 566777644 234444444332221 2222222 222222233 246888876544 4457788888877788776543
Q ss_pred ccc----ccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 509 GGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 509 gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
... .+.+..|..+++. .|.+.+++.++|..++..
T Consensus 81 ~~~~~~~~~~~~~ga~~~i~----------kp~~~~~l~~~i~~~~~~ 118 (196)
T PRK10360 81 HDSPALVEQALNAGARGFLS----------KRCSPDELIAAVHTVATG 118 (196)
T ss_pred CCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHcC
Confidence 222 2334567788876 889999999999998764
No 216
>PRK10037 cell division protein; Provisional
Probab=50.03 E-value=15 Score=36.66 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=26.1
Q ss_pred ceEEEEeeeecCccccccHHH--HhccchHHHHhCCCeEEEEe
Q 007247 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit 125 (611)
|||+-|... .||+|. ...+|+.+|+++|++|.+|=
T Consensus 1 ~~~iav~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID 37 (250)
T PRK10037 1 MAILGLQGV------RGGVGTTSITAALAWSLQMLGENVLVID 37 (250)
T ss_pred CcEEEEecC------CCCccHHHHHHHHHHHHHhcCCcEEEEe
Confidence 665555543 577665 45789999999999999994
No 217
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=49.52 E-value=26 Score=40.38 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=27.5
Q ss_pred cCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEe
Q 007247 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (611)
..++++|++|..- .+|+. +|.+|+++|++|+|+=
T Consensus 78 ~~~~~~VlIVGgG------IaGLa-----lAlaL~r~Gi~V~V~E 111 (668)
T PLN02927 78 KKKKSRVLVAGGG------IGGLV-----FALAAKKKGFDVLVFE 111 (668)
T ss_pred ccCCCCEEEECCC------HHHHH-----HHHHHHhcCCeEEEEe
Confidence 3456899999963 36666 8999999999999994
No 218
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=49.32 E-value=2.5e+02 Score=30.81 Aligned_cols=130 Identities=13% Similarity=0.051 Sum_probs=68.2
Q ss_pred CcEEEEEcCcc-----cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCC----CceEEecccChHHHHH
Q 007247 402 IPVIGFIGRLE-----EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKARGVAKFNIPLAHM 472 (611)
Q Consensus 402 ~~~il~iGrl~-----~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~v~~~~~~~~~~~~~ 472 (611)
..+++..|... +.+-...++.+++.+ +++.|++.=....... +....+ .++....+.+...+
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~--~~~~FiW~~~~~~~~~-----~~~~~~~~~~~nV~~~~W~PQ~~l-- 348 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL--QGVTFLWKYRPDDSIY-----FPEGLPNRGRGNVVLSKWAPQNDL-- 348 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC--CCceEEEEecCCcchh-----hhhcCCCCCcCceEEecCCCcHHH--
Confidence 34566677764 355566777888877 5777666655432111 222222 34554334444322
Q ss_pred HHHHccEEEeCCCCCCCcH-HHHHHHHcCCceEEcC-Ccc---ccc-ceecCcceEEecccccccccCCccCHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVAS-TGG---LVD-TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl-~~lEAma~G~PvI~s~-~gg---~~e-~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i 546 (611)
++....+-++-++ ||. +.+|++.+|+|+|+-. .|. ... +.+++..+.+. ..+..+.+ +.+++
T Consensus 349 ll~H~~v~~FvTH---gG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~--------~~~~~~~~-~~~~~ 416 (496)
T KOG1192|consen 349 LLDHPAVGGFVTH---GGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD--------KRDLVSEE-LLEAI 416 (496)
T ss_pred hcCCCcCcEEEEC---CcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe--------hhhcCcHH-HHHHH
Confidence 1222223333333 343 5699999999999643 222 222 33345445442 11233334 78888
Q ss_pred HHHHHh
Q 007247 547 RRALAT 552 (611)
Q Consensus 547 ~~ll~~ 552 (611)
..++++
T Consensus 417 ~~il~~ 422 (496)
T KOG1192|consen 417 KEILEN 422 (496)
T ss_pred HHHHcC
Confidence 888775
No 219
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=48.45 E-value=16 Score=37.59 Aligned_cols=35 Identities=29% Similarity=0.535 Sum_probs=27.1
Q ss_pred ceEEEEeeeecCccccccHH--HHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++.+ .||+| +...+||.+|+++|++|.+|=..
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7877766 36665 45778999999999999998543
No 220
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=47.75 E-value=65 Score=32.20 Aligned_cols=97 Identities=16% Similarity=0.214 Sum_probs=60.8
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEE--ecccChHHHHHHH-----HHccEEEeCC---C
Q 007247 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG--VAKFNIPLAHMII-----AGADFILIPS---R 485 (611)
Q Consensus 416 g~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~--~~~~~~~~~~~i~-----~~aDv~l~pS---~ 485 (611)
|.|++.+.++...+.+.++.++|+.+...++..+.+..+++.++.+ .+.|+.+....+. .++|++++-- .
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 8999999888876667899999988777777788888887544443 3555433322222 4678887643 3
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCcccccce
Q 007247 486 FEPCGLIQLHAMRYGTVPIVASTGGLVDTV 515 (611)
Q Consensus 486 ~E~~gl~~lEAma~G~PvI~s~~gg~~e~v 515 (611)
.|-|-....+- .+.+++ -..||.-|+.
T Consensus 170 QE~~~~~~~~~--~~~~v~-~gvGg~fD~~ 196 (243)
T PRK03692 170 QEIFMRDCRLV--YPDALY-MGVGGTYDVF 196 (243)
T ss_pred HHHHHHHHHHh--CCCCEE-EEeCeEEEEe
Confidence 35543332222 244444 3477777765
No 221
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=47.63 E-value=52 Score=34.20 Aligned_cols=81 Identities=17% Similarity=0.281 Sum_probs=49.7
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc--------ChHHHHHHHHHccEEEe--CCCCCC---CcHHHHHHH
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------NIPLAHMIIAGADFILI--PSRFEP---CGLIQLHAM 497 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--------~~~~~~~i~~~aDv~l~--pS~~E~---~gl~~lEAm 497 (611)
+-.+-|+|-|. +-+.+.++...++-++..+-.. ....+.++++.||++++ |..-|+ ++-..++.|
T Consensus 145 gktvGIiG~G~--IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~~~M 222 (311)
T PRK08410 145 GKKWGIIGLGT--IGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKELKLL 222 (311)
T ss_pred CCEEEEECCCH--HHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHHHhC
Confidence 34455556555 4444444444444333332211 11235679999999765 555566 455689999
Q ss_pred HcCCceEEcCCccccc
Q 007247 498 RYGTVPIVASTGGLVD 513 (611)
Q Consensus 498 a~G~PvI~s~~gg~~e 513 (611)
--|.-.|.+.-|++.|
T Consensus 223 k~~a~lIN~aRG~vVD 238 (311)
T PRK08410 223 KDGAILINVGRGGIVN 238 (311)
T ss_pred CCCeEEEECCCccccC
Confidence 8898889888887655
No 222
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=44.93 E-value=54 Score=32.96 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=31.3
Q ss_pred HHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccc
Q 007247 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 511 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~ 511 (611)
+.+++..+|+++.-+..+...-.+..|+..|+|+|+..+|..
T Consensus 54 l~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s 95 (257)
T PRK00048 54 LEAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFT 95 (257)
T ss_pred HHHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 445667899999777655555567889999999998865543
No 223
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=44.32 E-value=24 Score=36.27 Aligned_cols=38 Identities=18% Similarity=0.268 Sum_probs=27.9
Q ss_pred CCCceEEEEeeeecCccccccHHH--HhccchHHHHhCCCeEEEEee
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit~ 126 (611)
|.+|||.-|+ . .||+|. .+.+|+.+|++.|++|-+|=.
T Consensus 1 ~~~~~~iai~-~------KGGvGKTt~~~nLa~~la~~g~kVLliD~ 40 (295)
T PRK13234 1 MSKLRQIAFY-G------KGGIGKSTTSQNTLAALVEMGQKILIVGC 40 (295)
T ss_pred CCcceEEEEE-C------CCCccHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4567766554 2 466654 568899999999999999943
No 224
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=44.28 E-value=47 Score=28.28 Aligned_cols=43 Identities=12% Similarity=0.306 Sum_probs=30.1
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEe
Q 007247 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462 (611)
Q Consensus 418 d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 462 (611)
..+-+.+..+ |+.++|++|+....-.+...++++++|+++..+
T Consensus 53 ~~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 53 DNIERILRDF--PERKFILIGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred HHHHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 3444444444 788999999965434677778899999887644
No 225
>PRK06932 glycerate dehydrogenase; Provisional
Probab=44.05 E-value=61 Score=33.72 Aligned_cols=81 Identities=19% Similarity=0.176 Sum_probs=50.2
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC-------hHHHHHHHHHccEEEe--CCCCCC---CcHHHHHHHH
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-------IPLAHMIIAGADFILI--PSRFEP---CGLIQLHAMR 498 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-------~~~~~~i~~~aDv~l~--pS~~E~---~gl~~lEAma 498 (611)
+-++.|+|-|. +-+.+.++.+.++-++..+-... ...+.++++.||++++ |..-|+ ++-..++.|-
T Consensus 147 gktvgIiG~G~--IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~mk 224 (314)
T PRK06932 147 GSTLGVFGKGC--LGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLALMK 224 (314)
T ss_pred CCEEEEECCCH--HHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHHhCC
Confidence 34556666665 44555555444443333322111 1235689999999875 444555 4556899998
Q ss_pred cCCceEEcCCccccc
Q 007247 499 YGTVPIVASTGGLVD 513 (611)
Q Consensus 499 ~G~PvI~s~~gg~~e 513 (611)
-|.-+|.+.-|++.+
T Consensus 225 ~ga~lIN~aRG~~Vd 239 (314)
T PRK06932 225 PTAFLINTGRGPLVD 239 (314)
T ss_pred CCeEEEECCCccccC
Confidence 899999988887655
No 226
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=43.77 E-value=1.8e+02 Score=33.12 Aligned_cols=181 Identities=15% Similarity=0.043 Sum_probs=101.9
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeC---CCchhHHHHHHHHHHCCCceEEecc
Q 007247 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGT---GKKPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 390 ~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~--~~~~lvivG~---g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
.+..+|+|. +..++..+..|- |==...++.+.++.+ |+..|.+.-- |...+...++++..+ |+++.+..-
T Consensus 749 ~r~~y~Lp~--d~vvf~~FNqLy--KidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~-p~riifs~v 823 (966)
T KOG4626|consen 749 TRSQYGLPE--DAVVFCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLE-PDRIIFSPV 823 (966)
T ss_pred CCCCCCCCC--CeEEEeechhhh--cCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCC-ccceeeccc
Confidence 356788884 335555555553 322344455544443 6766655433 233355555555543 345554332
Q ss_pred cChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCccccccee-----cCcceEEecccccccccCCccCH
Q 007247 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-----EGFTGFQMGSFSVDCEAVDPVDV 539 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~-----~g~~G~l~~~~~~~~~~v~~~d~ 539 (611)
-..++--.-..-+|+.+=+..+-|. .+-+|.+.+|+|+|+-...-+..-|. .-+.|-+ -..+.
T Consensus 824 a~k~eHvrr~~LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hl-----------iak~~ 891 (966)
T KOG4626|consen 824 AAKEEHVRRGQLADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHL-----------IAKNR 891 (966)
T ss_pred cchHHHHHhhhhhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHH-----------HhhhH
Confidence 2222222356678888876665432 34578899999998765332222111 1122322 24567
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH---H--HhhCCchHHHHHHHHHHHHHHHc
Q 007247 540 AAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 540 ~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+|..+.--++-.+ .+.+..+...- + ..-|+-...+..++++|.++.+.
T Consensus 892 eEY~~iaV~Latd--~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 892 EEYVQIAVRLATD--KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHHHHHhhcC--HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 7888777777666 44444443332 2 25688899999999999999874
No 227
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=42.93 E-value=37 Score=32.76 Aligned_cols=37 Identities=24% Similarity=0.071 Sum_probs=28.7
Q ss_pred CCceEEEEeeeecCccccccHHHHh--ccchHHHHhCCCeEEEEeec
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~--~~La~~L~~~Gh~V~vit~~ 127 (611)
+++||++-- +||.+.+- ..|++.|.+.||+|.++...
T Consensus 4 ~~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 4 KGKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 467776554 47777665 68999999999999988755
No 228
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=42.91 E-value=23 Score=36.77 Aligned_cols=37 Identities=35% Similarity=0.600 Sum_probs=27.8
Q ss_pred ceEEEEeeeecCccccccHHHHhcc--chHHHHhCCCeEEEEeecC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGG--LPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~--La~~L~~~Gh~V~vit~~~ 128 (611)
|||+|++. .||+|.-+.. +|..++++|++|.+++...
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dp 39 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTDP 39 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESST
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecCC
Confidence 78999885 4777766655 7788899999999998763
No 229
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=42.91 E-value=25 Score=34.37 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=24.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||+||. |.|.+-..|+..|++.||+|+++...
T Consensus 1 MkI~IIG----------G~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 1 MKIAVLG----------GTGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CEEEEEc----------CCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 6777663 34445566889999999999987543
No 230
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=42.84 E-value=3.1e+02 Score=26.32 Aligned_cols=99 Identities=13% Similarity=0.031 Sum_probs=59.8
Q ss_pred cccCHHHHHHHHHhcccCCcEEEEEeCCCc---hhHHHHHHHHHHCCCceEEeccc---ChHHHHHHHHHccEEEeCC--
Q 007247 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKF---NIPLAHMIIAGADFILIPS-- 484 (611)
Q Consensus 413 ~~Kg~d~li~a~~~l~~~~~~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~---~~~~~~~i~~~aDv~l~pS-- 484 (611)
.....+.+-+.+.+....+.+++++.+... .+.+...+....++-++..+..+ +.+...+.+..||+++++-
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~ 90 (210)
T cd03129 11 KAHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGN 90 (210)
T ss_pred ccChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCc
Confidence 444445555555555435778888887652 23333444444444444444433 3355667999999999875
Q ss_pred ------CCCCC--cHHHHHHHHcCCceEEcCCccc
Q 007247 485 ------RFEPC--GLIQLHAMRYGTVPIVASTGGL 511 (611)
Q Consensus 485 ------~~E~~--gl~~lEAma~G~PvI~s~~gg~ 511 (611)
.+... --.+.+....|+|++.++.|.+
T Consensus 91 ~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 91 QLRLLSVLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred HHHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 12222 2257888888999999887753
No 231
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=42.31 E-value=25 Score=35.37 Aligned_cols=39 Identities=23% Similarity=0.265 Sum_probs=27.8
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
++||||+.+..- - ...-+..|+++|.+.| +|+|++|...
T Consensus 4 ~~M~ILltNDDG-i------~a~Gi~aL~~~l~~~g-~V~VvAP~~~ 42 (257)
T PRK13932 4 KKPHILVCNDDG-I------EGEGIHVLAASMKKIG-RVTVVAPAEP 42 (257)
T ss_pred CCCEEEEECCCC-C------CCHHHHHHHHHHHhCC-CEEEEcCCCC
Confidence 469999888651 1 1123666888898888 8999999844
No 232
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=42.27 E-value=21 Score=38.59 Aligned_cols=38 Identities=26% Similarity=0.268 Sum_probs=28.8
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.|||+|+.. |. .|-+. -...|+++|.++||+|..+|..
T Consensus 1 ~mkil~~~~---~~--~Ghv~-p~~aL~~eL~~~gheV~~~~~~ 38 (406)
T COG1819 1 RMKILFVVC---GA--YGHVN-PCLALGKELRRRGHEVVFASTG 38 (406)
T ss_pred CceEEEEec---cc--ccccc-chHHHHHHHHhcCCeEEEEeCH
Confidence 499999984 21 23333 5666899999999999999965
No 233
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=41.65 E-value=3.4e+02 Score=26.32 Aligned_cols=90 Identities=10% Similarity=0.103 Sum_probs=49.0
Q ss_pred ccCHHHHHHHHHhcccC--CcEEEEEeCCC-chhHHHHHHHH--HHCCCceEEe-cccChHHHHHHHHHccEEEeCCCCC
Q 007247 414 QKGSDILAAAIPHFIKE--NVQIIVLGTGK-KPMEKQLEQLE--ILYPEKARGV-AKFNIPLAHMIIAGADFILIPSRFE 487 (611)
Q Consensus 414 ~Kg~d~li~a~~~l~~~--~~~lvivG~g~-~~~~~~l~~l~--~~~~~~v~~~-~~~~~~~~~~i~~~aDv~l~pS~~E 487 (611)
..-.+.+.+.+..+.+. .+.++.....+ ........... .....++... ...+......+++.||++|-...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl-- 266 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRL-- 266 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCC--
Confidence 44456666677666653 33333333332 22222222221 1112223322 33355667789999998886654
Q ss_pred CCcHHHHHHHHcCCceEEcCC
Q 007247 488 PCGLIQLHAMRYGTVPIVAST 508 (611)
Q Consensus 488 ~~gl~~lEAma~G~PvI~s~~ 508 (611)
=..+=|+++|+|+|+-++
T Consensus 267 ---H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 267 ---HGAILALSLGVPVIAISY 284 (286)
T ss_pred ---HHHHHHHHcCCCEEEEec
Confidence 234558999999998654
No 234
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=41.50 E-value=35 Score=32.68 Aligned_cols=40 Identities=18% Similarity=0.328 Sum_probs=29.6
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||++.|++.- + .-|-..++.+||.+|+++|++|.+|=..
T Consensus 16 ~~kvI~v~s~k-g---G~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 16 EIKVLLITSVK-P---GEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CCcEEEEecCC-C---CCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47877777531 1 2356668899999999999999988543
No 235
>PRK07236 hypothetical protein; Provisional
Probab=41.00 E-value=25 Score=37.53 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=28.0
Q ss_pred cCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
.|+.++|++|+.- .+|+. +|..|++.|++|+|+=.
T Consensus 3 ~~~~~~ViIVGaG------~aGl~-----~A~~L~~~G~~v~v~E~ 37 (386)
T PRK07236 3 HMSGPRAVVIGGS------LGGLF-----AALLLRRAGWDVDVFER 37 (386)
T ss_pred CCCCCeEEEECCC------HHHHH-----HHHHHHhCCCCEEEEec
Confidence 4677899999863 35666 88899999999999953
No 236
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=41.00 E-value=28 Score=36.02 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=25.8
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.|||++++. |++|.++. -.|++.|++|+++...
T Consensus 2 ~m~I~IiGa--------GaiG~~~a---~~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILGA--------GSLGSLWA---CRLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEECC--------CHHHHHHH---HHHHhCCCCeEEEEec
Confidence 589999983 77776644 4478899999999864
No 237
>PRK09271 flavodoxin; Provisional
Probab=40.75 E-value=38 Score=31.26 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=30.1
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEe
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (611)
|||+++-.. .+|..+.+...++..|.+.|++|.+.-
T Consensus 1 mkv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYAS-----LSGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEEc-----CCchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 788888653 478899999999999999999987664
No 238
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=40.57 E-value=83 Score=23.24 Aligned_cols=64 Identities=14% Similarity=0.202 Sum_probs=42.0
Q ss_pred cEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 432 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 432 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
..+.+.|.-+..-.+.++++...++.++.... . ..++.++.+..... ....+|...|+|+|..+
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~--~--------~~~thvI~~~~~~~--~~~~~~~~~~~~iV~~~ 65 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTSSV--S--------KKTTHVIVGSDAGP--KKLLKAIKLGIPIVTPE 65 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEeccc--c--------CCceEEEECCCCCc--hHHHHHHHcCCeEecHH
Confidence 56778887533467788888888776554322 1 46677777755322 22778889999988754
No 239
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=39.97 E-value=69 Score=25.75 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=37.6
Q ss_pred HHhhhccEEEecCHHHHHHHHcCcCCCcccchhhhccceeEeeCCcccCCcCCCC
Q 007247 312 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 366 (611)
Q Consensus 312 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~ 366 (611)
......|.|++.-....+.+++ .|.. ++..+|-++|+..+.|..
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~---~G~~--------~V~yLPLAa~~~~~~p~~ 57 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRN---LGAE--------NVFYLPLAANPERFRPIP 57 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHH---cCCC--------CEEEccccCCHHHhCccc
Confidence 4466899999999999999997 5655 899999999999998874
No 240
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=39.66 E-value=2.1e+02 Score=27.90 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=39.9
Q ss_pred cCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHH-HHHHHccEEEeCCC
Q 007247 415 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 485 (611)
Q Consensus 415 Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~l~pS~ 485 (611)
...+..++.++.+.+..++++=++-..+.-.+.++++.+++|+-..+-+.. +.+... .+-++||+++.|..
T Consensus 24 ~~~~~a~~i~~al~~~Gi~~iEitl~~~~~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA~FivsP~~ 96 (212)
T PRK05718 24 NKLEDAVPLAKALVAGGLPVLEVTLRTPAALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGAQFIVSPGL 96 (212)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccHHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCCCEEECCCC
Confidence 445666666666655444444444333445666777777777644554444 333333 35567777777765
No 241
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=39.47 E-value=39 Score=31.48 Aligned_cols=40 Identities=28% Similarity=0.247 Sum_probs=33.2
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
+|+|+-|+.+ +..|-.+.+..|.+.|.++|++|-+|--..
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iKH~h 40 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVKHAH 40 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEEecC
Confidence 3788877753 568889999999999999999999997553
No 242
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=39.47 E-value=4.9e+02 Score=27.58 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=63.5
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC------------chhHHHHHHHHHHCCCceEEecccChH
Q 007247 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIP 468 (611)
Q Consensus 401 ~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (611)
+.+.++..|- -.-...+.+++.++.+++..++++..|.-+ .+-.+.+.+...+.+-.+. .-.++.+
T Consensus 99 ~~~l~vIAGP-CsIEs~eq~l~~A~~lk~~g~~~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~~~-tev~d~~ 176 (352)
T PRK13396 99 NHPVVVVAGP-CSVENEEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLGII-TEVMDAA 176 (352)
T ss_pred CCeEEEEEeC-CcccCHHHHHHHHHHHHHcCCCEEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCcEE-EeeCCHH
Confidence 3345566663 223455678888888776677776655422 1234455555556653232 2344556
Q ss_pred HHHHHHHHccEEEeCCCC-CCCcHHHHHHH-HcCCceEEcCC
Q 007247 469 LAHMIIAGADFILIPSRF-EPCGLIQLHAM-RYGTVPIVAST 508 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~-E~~gl~~lEAm-a~G~PvI~s~~ 508 (611)
.+..+..-+|++-++|+. .+++ ++++. ..|+||+.+..
T Consensus 177 ~v~~~~~~~d~lqIga~~~~n~~--LL~~va~t~kPVllk~G 216 (352)
T PRK13396 177 DLEKIAEVADVIQVGARNMQNFS--LLKKVGAQDKPVLLKRG 216 (352)
T ss_pred HHHHHHhhCCeEEECcccccCHH--HHHHHHccCCeEEEeCC
Confidence 665566669999999984 4444 45555 67999999874
No 243
>PRK06487 glycerate dehydrogenase; Provisional
Probab=39.31 E-value=67 Score=33.46 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=51.4
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc------ChHHHHHHHHHccEEEe--CCCCCC---CcHHHHHHHHc
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF------NIPLAHMIIAGADFILI--PSRFEP---CGLIQLHAMRY 499 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~------~~~~~~~i~~~aDv~l~--pS~~E~---~gl~~lEAma~ 499 (611)
+-.+-|+|-|. +-+.+.++...++-++..+-.. ....+.++++.||++++ |...|+ ++-..+..|--
T Consensus 148 gktvgIiG~G~--IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~mk~ 225 (317)
T PRK06487 148 GKTLGLLGHGE--LGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELALMKP 225 (317)
T ss_pred CCEEEEECCCH--HHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhcCCC
Confidence 44566666665 5555555555554444332211 11135679999999875 444455 45568999999
Q ss_pred CCceEEcCCccccc
Q 007247 500 GTVPIVASTGGLVD 513 (611)
Q Consensus 500 G~PvI~s~~gg~~e 513 (611)
|.-+|.+.-|++.+
T Consensus 226 ga~lIN~aRG~vVd 239 (317)
T PRK06487 226 GALLINTARGGLVD 239 (317)
T ss_pred CeEEEECCCccccC
Confidence 99899988888665
No 244
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=38.99 E-value=66 Score=32.58 Aligned_cols=37 Identities=19% Similarity=0.050 Sum_probs=29.9
Q ss_pred HHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc
Q 007247 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 474 ~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (611)
...+|+++-.|..+..--.+..|+.+|+|+|+..+|.
T Consensus 66 ~~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigttg~ 102 (266)
T TIGR00036 66 ETDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGF 102 (266)
T ss_pred cCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCCC
Confidence 3468999988876666667899999999999977754
No 245
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.47 E-value=4.4e+02 Score=26.71 Aligned_cols=101 Identities=13% Similarity=0.048 Sum_probs=62.7
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCC-----------C-chhHHHHHHHHHHCCCceEEecccChHHHH
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG-----------K-KPMEKQLEQLEILYPEKARGVAKFNIPLAH 471 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g-----------~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 471 (611)
.++..|-- --...+.+++.+++|++-.++++..|.- . .+..+.+++...+.+-.+. .-.++...+.
T Consensus 28 ~~~iaGPC-sie~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~-te~~d~~~~~ 105 (266)
T PRK13398 28 KIIIAGPC-AVESEEQMVKVAEKLKELGVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVV-TEVMDTRDVE 105 (266)
T ss_pred EEEEEeCC-cCCCHHHHHHHHHHHHHcCCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEE-EeeCChhhHH
Confidence 44444443 3356788888888888777888888831 1 1234455566666653222 2234555555
Q ss_pred HHHHHccEEEeCCCC-CCCcHHHHH-HHHcCCceEEcCC
Q 007247 472 MIIAGADFILIPSRF-EPCGLIQLH-AMRYGTVPIVAST 508 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~-E~~gl~~lE-Ama~G~PvI~s~~ 508 (611)
.+..-+|++-++|+. +. ..+++ +-..|+||+.++.
T Consensus 106 ~l~~~vd~~kIga~~~~n--~~LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 106 EVADYADMLQIGSRNMQN--FELLKEVGKTKKPILLKRG 142 (266)
T ss_pred HHHHhCCEEEECcccccC--HHHHHHHhcCCCcEEEeCC
Confidence 555668999999984 44 33444 4467999999874
No 246
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=37.88 E-value=4.4e+02 Score=26.61 Aligned_cols=122 Identities=13% Similarity=0.041 Sum_probs=70.7
Q ss_pred CCcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc--ChHHHHHHHHH
Q 007247 401 NIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAG 476 (611)
Q Consensus 401 ~~~~il~iGrl~--~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--~~~~~~~i~~~ 476 (611)
+.|++ +.+-++ .+.|++.+++.+++. .+.-+++=+-+.+-...+.+..++++-....++.. +.+.+..+.+.
T Consensus 91 ~~p~v-lm~Y~N~i~~~G~e~F~~~~~~a---GvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~ 166 (263)
T CHL00200 91 KAPIV-IFTYYNPVLHYGINKFIKKISQA---GVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARA 166 (263)
T ss_pred CCCEE-EEecccHHHHhCHHHHHHHHHHc---CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHh
Confidence 33533 444444 477999999988876 67767777666433444555556666445555544 45677789999
Q ss_pred cc-EEEeCCCCCC------CcHHHHHHH-----HcCCceEEcCCccc-cc----ceecCcceEEeccc
Q 007247 477 AD-FILIPSRFEP------CGLIQLHAM-----RYGTVPIVASTGGL-VD----TVEEGFTGFQMGSF 527 (611)
Q Consensus 477 aD-v~l~pS~~E~------~gl~~lEAm-----a~G~PvI~s~~gg~-~e----~v~~g~~G~l~~~~ 527 (611)
++ ++.+-|+.-. ++-.+.|.+ ..++|+++ ..|-- .| +...|..|+++|+-
T Consensus 167 a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-GFGI~~~e~~~~~~~~GADGvVVGSa 233 (263)
T CHL00200 167 APGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-GFGISTSEQIKQIKGWNINGIVIGSA 233 (263)
T ss_pred CCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-ECCcCCHHHHHHHHhcCCCEEEECHH
Confidence 98 4333344321 222333333 46888877 32221 22 33345789988743
No 247
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) 1.6.99.2 from EC. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species []. This enzyme uses a FAD cofactor. The equation for this reaction is NAD(P)H + acceptor = NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy []. The family also includes acyl carrier protein phosphodiesterase 3.1.4.14 from EC. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP []. This family is related to FMN_red IPR005025 from INTERPRO and Flavodoxin_1 IPR008254 from INTERPRO.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050662 coenzyme binding; PDB: 1T5B_B 1DXQ_B 2B3D_A 2Z9D_B 2Z9C_A 2Z98_A 2D5I_A 2Z9B_A 1TIK_A 1V4B_A ....
Probab=37.62 E-value=37 Score=32.49 Aligned_cols=40 Identities=18% Similarity=0.231 Sum_probs=28.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCC-CeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~ 126 (611)
||||+|... |....+-...+...+..++.++| |+|+++=.
T Consensus 1 mkiLvI~as--p~~~~S~s~~l~~~~~~~~~~~~~~~v~~~dL 41 (199)
T PF02525_consen 1 MKILVINAS--PRPEGSFSRALADAFLEGLQEAGPHEVEIRDL 41 (199)
T ss_dssp EEEEEEE----SSTTTSHHHHHHHHHHHHHHHHTTSEEEEEET
T ss_pred CEEEEEEcC--CCCccCHHHHHHHHHHHHHHHcCCCEEEEEEC
Confidence 899999975 64212334556677889999999 99988843
No 248
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=37.61 E-value=26 Score=36.36 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=30.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||+|+-. |.....--.+....|..+.+++||+|.++.+.
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 33222323345777999999999999999987
No 249
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=37.41 E-value=35 Score=36.29 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=27.4
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+++|||++. ||.|.+-..|++.|.++||+|+.+...
T Consensus 19 ~~~~~IlVt----------GgtGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 19 SEKLRICIT----------GAGGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCCEEEEE----------CCccHHHHHHHHHHHhCCCEEEEEEec
Confidence 357898765 555555667899999999999998743
No 250
>PRK06756 flavodoxin; Provisional
Probab=36.76 E-value=49 Score=29.91 Aligned_cols=37 Identities=5% Similarity=0.161 Sum_probs=30.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
|||++|-.. .+|..+.+...++..|.+.|++|.++-.
T Consensus 2 mkv~IiY~S-----~tGnTe~vA~~ia~~l~~~g~~v~~~~~ 38 (148)
T PRK06756 2 SKLVMIFAS-----MSGNTEEMADHIAGVIRETENEIEVIDI 38 (148)
T ss_pred ceEEEEEEC-----CCchHHHHHHHHHHHHhhcCCeEEEeeh
Confidence 788888642 3799999999999999999999987754
No 251
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=36.62 E-value=33 Score=34.27 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=27.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
||||+.+.. |=...-+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILltNDD-------Gi~a~Gi~aL~~~l~~~g-~V~VvAP~~~ 37 (244)
T TIGR00087 1 MKILLTNDD-------GIHSPGIRALYQALKELG-EVTVVAPARQ 37 (244)
T ss_pred CeEEEECCC-------CCCCHhHHHHHHHHHhCC-CEEEEeCCCC
Confidence 899987764 222234677889999988 9999999844
No 252
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=36.26 E-value=5.1e+02 Score=28.29 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=60.1
Q ss_pred ccEEEeCCCCCC--CcHHHHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHhcC
Q 007247 477 ADFILIPSRFEP--CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (611)
Q Consensus 477 aDv~l~pS~~E~--~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 554 (611)
-+-++++-..|. .|.++-=+...|+|+..-.+|--.+-++.-..-..+ -.+.--+|+..|.+.+++.++.
T Consensus 241 ~~g~IlTKlD~~argG~aLs~~~~t~~PI~fig~Ge~v~Dle~f~p~~~~------~rilgmgDi~~L~ek~~~~~~~-- 312 (429)
T TIGR01425 241 VGSVIITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEIFKTQPFI------SKLLGMGDIEGLIDKVQDLKLD-- 312 (429)
T ss_pred CcEEEEECccCCCCccHHhhhHHHHCCCeEEEcCCCChhhcCcCChHHHH------HHHhcCCCcHHHHHHHHHhhhH--
Confidence 345666665553 566777788899999988877543333221100000 0012457888888888887663
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHH
Q 007247 555 TQALAEMMKNGMAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (611)
+...++.++-....|+.+.+.+++..+-
T Consensus 313 -~~~~~~~~k~~~~~f~l~D~~~q~~~i~ 340 (429)
T TIGR01425 313 -DNEKALIEKLKEGTFTLRDMYEQFQNLL 340 (429)
T ss_pred -HHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3344555555567899988888887654
No 253
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=36.07 E-value=1e+02 Score=32.25 Aligned_cols=44 Identities=32% Similarity=0.477 Sum_probs=35.2
Q ss_pred HHHHHHHccEEEe--CCCCCCCcH---HHHHHHHcCCceEEcCCccccc
Q 007247 470 AHMIIAGADFILI--PSRFEPCGL---IQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 470 ~~~i~~~aDv~l~--pS~~E~~gl---~~lEAma~G~PvI~s~~gg~~e 513 (611)
+.++++.||++.+ |...|+..+ ..++.|--|.-+|-+.-|++.|
T Consensus 194 l~ell~~sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~~VD 242 (324)
T COG1052 194 LDELLAESDIISLHCPLTPETRHLINAEELAKMKPGAILVNTARGGLVD 242 (324)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEECCCccccC
Confidence 5579999999764 666677554 5999999999999998888665
No 254
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=35.67 E-value=4.7e+02 Score=26.26 Aligned_cols=91 Identities=11% Similarity=-0.058 Sum_probs=58.2
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCC------------chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 416 GSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 416 g~d~li~a~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
.-+.+++.++.+++-+++++..|.-+ .+-.+.|.+..++++-.+. .-.++...+..+...+|++=+|
T Consensus 27 s~e~~~~~a~~~~~~g~~~~r~g~~kpRts~~sf~G~G~~gl~~L~~~~~~~Gl~~~-Tev~d~~~v~~~~e~vdilqIg 105 (250)
T PRK13397 27 SYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGLQGIRYLHEVCQEFGLLSV-SEIMSERQLEEAYDYLDVIQVG 105 (250)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccCCCCCCcccCCCCHHHHHHHHHHHHHcCCCEE-EeeCCHHHHHHHHhcCCEEEEC
Confidence 33566666666655678887777622 1234556666666663232 2344666666667789999999
Q ss_pred CCCCCCcHHHHHHH-HcCCceEEcCC
Q 007247 484 SRFEPCGLIQLHAM-RYGTVPIVAST 508 (611)
Q Consensus 484 S~~E~~gl~~lEAm-a~G~PvI~s~~ 508 (611)
|+. ..-..+++++ ..|+||+.+..
T Consensus 106 s~~-~~n~~LL~~va~tgkPVilk~G 130 (250)
T PRK13397 106 ARN-MQNFEFLKTLSHIDKPILFKRG 130 (250)
T ss_pred ccc-ccCHHHHHHHHccCCeEEEeCC
Confidence 973 3345666666 56999998874
No 255
>PRK13243 glyoxylate reductase; Reviewed
Probab=35.44 E-value=91 Score=32.72 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=32.3
Q ss_pred HHHHHHHccEEEeC--CCCCC---CcHHHHHHHHcCCceEEcCCccccc
Q 007247 470 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 470 ~~~i~~~aDv~l~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
+.++++.||++++. ...|+ ++-..+++|--|.-+|.+..|++.+
T Consensus 198 l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd 246 (333)
T PRK13243 198 LEELLRESDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTARGKVVD 246 (333)
T ss_pred HHHHHhhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcCchhcC
Confidence 45689999997764 33344 3446888898898889888887655
No 256
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=35.44 E-value=16 Score=36.44 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=27.2
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeecCCccccc-CCCce
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDTDV 139 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~-~~~~~ 139 (611)
.||.. +|-++++.||||.+.-|+.+-..+. |+...
T Consensus 31 yGGa~-----mAiefAeAGHDVVLaePn~d~~dd~~w~~ve 66 (340)
T COG4007 31 YGGAR-----MAIEFAEAGHDVVLAEPNRDIMDDEHWKRVE 66 (340)
T ss_pred CCchH-----HHHHHHHcCCcEEeecCCccccCHHHHHHHH
Confidence 48887 8999999999999999886655443 65543
No 257
>PLN02928 oxidoreductase family protein
Probab=34.51 E-value=87 Score=33.07 Aligned_cols=45 Identities=22% Similarity=0.281 Sum_probs=33.2
Q ss_pred HHHHHHHHccEEEe--CCCCCCC---cHHHHHHHHcCCceEEcCCccccc
Q 007247 469 LAHMIIAGADFILI--PSRFEPC---GLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 469 ~~~~i~~~aDv~l~--pS~~E~~---gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
.+.++++.||++++ |...|+- +-..+..|--|.-+|.+.-|++.+
T Consensus 219 ~L~ell~~aDiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVd 268 (347)
T PLN02928 219 DIYEFAGEADIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLD 268 (347)
T ss_pred CHHHHHhhCCEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCccccC
Confidence 45679999999876 4444554 456888888888888888777654
No 258
>PLN03015 UDP-glucosyl transferase
Probab=34.45 E-value=6.7e+02 Score=27.71 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=45.6
Q ss_pred HHHHHccEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCcc----cccce-ecCcceEEecccccccccCCccCHHHHHHH
Q 007247 472 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 472 ~i~~~aDv~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
++++...+..+-++ || ++.+||+.+|+|+|+-...+ ....+ +.-+.|.-+..... -..-..++++++
T Consensus 347 ~vL~h~~vg~fvtH---~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~----~~~v~~e~i~~~ 419 (470)
T PLN03015 347 EILSHRSIGGFLSH---CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS----EKVIGREEVASL 419 (470)
T ss_pred HHhccCccCeEEec---CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc----CCccCHHHHHHH
Confidence 36777777665555 33 58999999999999976432 22222 33455665410000 012367899999
Q ss_pred HHHHHH
Q 007247 546 VRRALA 551 (611)
Q Consensus 546 i~~ll~ 551 (611)
|+++++
T Consensus 420 v~~lm~ 425 (470)
T PLN03015 420 VRKIVA 425 (470)
T ss_pred HHHHHc
Confidence 999995
No 259
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=34.22 E-value=36 Score=34.19 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=25.2
Q ss_pred ceEEEEeeeecCccccccHH--HHhccchHHHHhCCCeEEEEe
Q 007247 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (611)
|+|++. . .||+| +.+.+||.+|+++|++|.+|=
T Consensus 1 ~~i~~~-g-------KGGVGKTT~~~nLA~~La~~g~rVLliD 35 (268)
T TIGR01281 1 MILAVY-G-------KGGIGKSTTSSNLSVAFAKLGKRVLQIG 35 (268)
T ss_pred CEEEEE-c-------CCcCcHHHHHHHHHHHHHhCCCeEEEEe
Confidence 566665 2 47665 456789999999999999984
No 260
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=33.92 E-value=1.1e+02 Score=32.01 Aligned_cols=44 Identities=30% Similarity=0.427 Sum_probs=33.6
Q ss_pred HHHHHHHccEEEe--CCCCCC---CcHHHHHHHHcCCceEEcCCccccc
Q 007247 470 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 470 ~~~i~~~aDv~l~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
+.++++.||++++ |..-|+ ++-..++.|--|.-+|.+.-|++.|
T Consensus 194 l~ell~~sDvv~lh~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~vVd 242 (323)
T PRK15409 194 LDTLLQESDFVCIILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVD 242 (323)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECCCccccC
Confidence 4578999999765 544455 4556999999999999998887664
No 261
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=33.26 E-value=2.5e+02 Score=27.08 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=35.1
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHH-HHHHHccEEEeCCC
Q 007247 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 485 (611)
Q Consensus 418 d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~l~pS~ 485 (611)
+..++.++.|.+..++++=+--..+...+.++.+.+++|+-+.+-+.. +.+++. .+-++|++++.|..
T Consensus 20 ~~a~~~~~al~~gGi~~iEiT~~t~~a~~~I~~l~~~~p~~~vGAGTV~~~e~a~~a~~aGA~FivSP~~ 89 (196)
T PF01081_consen 20 EDAVPIAEALIEGGIRAIEITLRTPNALEAIEALRKEFPDLLVGAGTVLTAEQAEAAIAAGAQFIVSPGF 89 (196)
T ss_dssp GGHHHHHHHHHHTT--EEEEETTSTTHHHHHHHHHHHHTTSEEEEES--SHHHHHHHHHHT-SEEEESS-
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHHCCCCeeEEEeccCHHHHHHHHHcCCCEEECCCC
Confidence 334444444444344443333333445667777777777656666555 334443 46677888887765
No 262
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=33.12 E-value=6.4e+02 Score=27.06 Aligned_cols=122 Identities=17% Similarity=0.204 Sum_probs=64.2
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCC--CceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHH
Q 007247 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 495 (611)
Q Consensus 418 d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lE 495 (611)
..+++-+...+...+.+...-.+..+...-.+.+....+ .++.....-..+.+..+++++|+.|-.-. =.++=
T Consensus 225 ~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~-----HsaI~ 299 (385)
T COG2327 225 NEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRL-----HSAIM 299 (385)
T ss_pred HHHHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeehh-----HHHHH
Confidence 333444333333455544443333333444444444443 33333221112344458899998764322 24555
Q ss_pred HHHcCCceEEcCCcccc-cceec-CcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 496 AMRYGTVPIVASTGGLV-DTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 496 Ama~G~PvI~s~~gg~~-e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
||+.|+|+|+-..-.=. .+.++ |-.++.. -.++.|.+.+...+.+.+.+
T Consensus 300 al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~--------~i~~~~~~~l~~~~~e~~~~ 350 (385)
T COG2327 300 ALAFGVPAIAIAYDPKVRGLMQDLGLPGFAI--------DIDPLDAEILSAVVLERLTK 350 (385)
T ss_pred HHhcCCCeEEEeecHHHHHHHHHcCCCcccc--------cCCCCchHHHHHHHHHHHhc
Confidence 99999999998754311 12221 1223321 23677888888888888876
No 263
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=32.90 E-value=70 Score=28.28 Aligned_cols=39 Identities=18% Similarity=0.082 Sum_probs=28.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCC-CeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~ 126 (611)
||+.++... +|+ .--.......+|.++.+.| ++|.++--
T Consensus 1 m~~~Ivvt~-ppY--g~q~a~~A~~fA~all~~gh~~v~iFly 40 (126)
T COG1553 1 MKYTIVVTG-PPY--GTESAFSALRFAEALLEQGHELVRLFLY 40 (126)
T ss_pred CeEEEEEec-CCC--ccHHHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 788888876 675 2135557788999999997 67777753
No 264
>PRK13671 hypothetical protein; Provisional
Probab=32.83 E-value=1.5e+02 Score=30.67 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=23.4
Q ss_pred EEEEcCccc-ccCHHHHHHHHHhcccC-CcEEEEEeC
Q 007247 405 IGFIGRLEE-QKGSDILAAAIPHFIKE-NVQIIVLGT 439 (611)
Q Consensus 405 il~iGrl~~-~Kg~d~li~a~~~l~~~-~~~lvivG~ 439 (611)
++.|..++| +.|+..+++.+.+.... .+-++..|+
T Consensus 3 ~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~ 39 (298)
T PRK13671 3 IGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGK 39 (298)
T ss_pred eeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcC
Confidence 566777776 78999999888886553 344444444
No 265
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=32.74 E-value=66 Score=29.91 Aligned_cols=38 Identities=24% Similarity=0.271 Sum_probs=28.1
Q ss_pred HHHHHccEEEeCCC----CCCCcH--HHHHHHHcCCceEEcCCc
Q 007247 472 MIIAGADFILIPSR----FEPCGL--IQLHAMRYGTVPIVASTG 509 (611)
Q Consensus 472 ~i~~~aDv~l~pS~----~E~~gl--~~lEAma~G~PvI~s~~g 509 (611)
.+-..+|++|+.-. .|+-|+ .+.+|++.|+||+++-..
T Consensus 89 al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 89 ALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 35566998888764 245555 599999999999997543
No 266
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=32.60 E-value=3.6e+02 Score=26.09 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=35.3
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHH-HHHHHccEEEeCCC
Q 007247 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 485 (611)
Q Consensus 416 g~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~l~pS~ 485 (611)
..+..++.++.+.+..++.+=+--..+...+.++++..++++-+.+-+.. +.+++. .+-++|++++.|..
T Consensus 14 ~~~~a~~ia~al~~gGi~~iEit~~tp~a~~~I~~l~~~~~~~~vGAGTVl~~e~a~~ai~aGA~FivSP~~ 85 (201)
T PRK06015 14 DVEHAVPLARALAAGGLPAIEITLRTPAALDAIRAVAAEVEEAIVGAGTILNAKQFEDAAKAGSRFIVSPGT 85 (201)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHCCCCEEeeEeCcCHHHHHHHHHcCCCEEECCCC
Confidence 44555555555555333222222222234566666666666544454444 333333 35567777776664
No 267
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=32.50 E-value=1.8e+02 Score=24.72 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=47.8
Q ss_pred HHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHH--HccEEEeCCCCCCCcHHHHHHHH
Q 007247 421 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMR 498 (611)
Q Consensus 421 i~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~l~pS~~E~~gl~~lEAma 498 (611)
++++.+. .++++++-+=+.. .+..++...+++ +. .|.. ..+++. ..|++++.+..+.-.-.+.+++.
T Consensus 16 ~~~~~~~-~~~~~v~~v~d~~---~~~~~~~~~~~~--~~---~~~~--~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~ 84 (120)
T PF01408_consen 16 LRALLRS-SPDFEVVAVCDPD---PERAEAFAEKYG--IP---VYTD--LEELLADEDVDAVIIATPPSSHAEIAKKALE 84 (120)
T ss_dssp HHHHHHT-TTTEEEEEEECSS---HHHHHHHHHHTT--SE---EESS--HHHHHHHTTESEEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHhc-CCCcEEEEEEeCC---HHHHHHHHHHhc--cc---chhH--HHHHHHhhcCCEEEEecCCcchHHHHHHHHH
Confidence 4444443 2566666443333 344555566665 32 2222 334666 68999988887777778899999
Q ss_pred cCCceEEcC
Q 007247 499 YGTVPIVAS 507 (611)
Q Consensus 499 ~G~PvI~s~ 507 (611)
.|++|++-.
T Consensus 85 ~g~~v~~EK 93 (120)
T PF01408_consen 85 AGKHVLVEK 93 (120)
T ss_dssp TTSEEEEES
T ss_pred cCCEEEEEc
Confidence 999998876
No 268
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=32.47 E-value=2.3e+02 Score=27.11 Aligned_cols=40 Identities=15% Similarity=0.063 Sum_probs=26.4
Q ss_pred HHccEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCcccccce
Q 007247 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTV 515 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v 515 (611)
..-|++++....+ -..++.||-.+|+|+|+- |+....+.+
T Consensus 126 ~~Pdlviv~~~~~-~~~ai~Ea~~l~IP~I~i~Dtn~~~~~i 166 (193)
T cd01425 126 RLPDLVIVLDPRK-EHQAIREASKLGIPVIAIVDTNCDPDLI 166 (193)
T ss_pred cCCCEEEEeCCcc-chHHHHHHHHcCCCEEEEecCCCCCccc
Confidence 3456666655432 268899999999999985 343333333
No 269
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=32.28 E-value=47 Score=32.87 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=27.1
Q ss_pred ceEEEEeeeecCccccccHHHH--hccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~--~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||.-|... .||+|.- ..+|+.+|+++|++|.++=..
T Consensus 1 M~iI~v~n~------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 39 (231)
T PRK13849 1 MKLLTFCSF------KGGAGKTTALMGLCAALASDGKRVALFEAD 39 (231)
T ss_pred CeEEEEECC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 565555542 5777654 567999999999999999654
No 270
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=32.16 E-value=5.2e+02 Score=25.83 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=57.8
Q ss_pred EcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCc---hhHHHHHHHHHHCCC-ceEEecccC-----hHHHHHHHHHc
Q 007247 408 IGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKK---PMEKQLEQLEILYPE-KARGVAKFN-----IPLAHMIIAGA 477 (611)
Q Consensus 408 iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~---~~~~~l~~l~~~~~~-~v~~~~~~~-----~~~~~~i~~~a 477 (611)
+|.=+...+-..+.+.+-++.. ++.+++++.+... .+.+...+.-..++- .+..+.-.+ .+...+.+..|
T Consensus 4 iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~a 83 (250)
T TIGR02069 4 IGGAEDKVGDREILREFVSRAGGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNA 83 (250)
T ss_pred EeCccccCChHHHHHHHHHHhCCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhC
Confidence 3333333344446665555543 5678888876442 223333333333442 233222221 22334678999
Q ss_pred cEEEeCC--------CCCCCcH--HHHHHHHcCCceEEcCCccc
Q 007247 478 DFILIPS--------RFEPCGL--IQLHAMRYGTVPIVASTGGL 511 (611)
Q Consensus 478 Dv~l~pS--------~~E~~gl--~~lEAma~G~PvI~s~~gg~ 511 (611)
|++++.- .++..++ .+-++...|+|++.++.|.+
T Consensus 84 d~I~~~GGnq~~l~~~l~~t~l~~~l~~~~~~G~vi~G~SAGA~ 127 (250)
T TIGR02069 84 TGIFFTGGDQLRITSLLGDTPLLDRLRKRVHEGIILGGTSAGAA 127 (250)
T ss_pred CEEEEeCCCHHHHHHHHcCCcHHHHHHHHHHcCCeEEEccHHHH
Confidence 9988764 2344454 46688899999999987764
No 271
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=31.68 E-value=57 Score=33.03 Aligned_cols=27 Identities=33% Similarity=0.571 Sum_probs=22.3
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
++|+| ..+++.|+++||+|.+++.+.+
T Consensus 15 SsGIG---~~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 15 SSGIG---AELAKQLARRGYNLILVARRED 41 (265)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCcHH
Confidence 46777 4589999999999999997744
No 272
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=31.29 E-value=55 Score=31.75 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=23.7
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
++.|+|++++. .||+| ..|++.|.++||+|.+++.+
T Consensus 4 ~~~~~vlItGa-------sg~iG---~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 4 LMGRVALVTGA-------ARGLG---RAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCCCEEEEeCC-------CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 33346666553 35555 45788899999999776654
No 273
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=31.13 E-value=47 Score=33.25 Aligned_cols=28 Identities=36% Similarity=0.587 Sum_probs=22.0
Q ss_pred cccHH--HHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||+| +.+.+||.+|+++|++|.+|=..
T Consensus 9 KGGvGKTT~~~nLA~~La~~G~kVlliD~D 38 (270)
T cd02040 9 KGGIGKSTTTQNLSAALAEMGKKVMIVGCD 38 (270)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 35554 56688999999999999999443
No 274
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=31.02 E-value=47 Score=35.95 Aligned_cols=37 Identities=30% Similarity=0.413 Sum_probs=28.1
Q ss_pred CCceEEEEeeeecCccccccHHH--HhccchHHHHhCCCeEEEEe
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit 125 (611)
.+|+|+-|... .||+|. ...+||.+|+.+|++|.+|=
T Consensus 119 ~~~~vIav~n~------KGGvGKTTta~nLA~~LA~~G~rVLlID 157 (405)
T PRK13869 119 EHLQVIAVTNF------KGGSGKTTTSAHLAQYLALQGYRVLAVD 157 (405)
T ss_pred CCceEEEEEcC------CCCCCHHHHHHHHHHHHHhcCCceEEEc
Confidence 46777666653 566554 56789999999999999984
No 275
>PRK12827 short chain dehydrogenase; Provisional
Probab=31.00 E-value=59 Score=31.67 Aligned_cols=34 Identities=32% Similarity=0.560 Sum_probs=24.6
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
++|+|+++.. .||+| ..+++.|+++||+|.++..
T Consensus 5 ~~~~ilItGa-------sg~iG---~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLITGG-------SGGLG---RAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCCEEEEECC-------CChHH---HHHHHHHHHCCCeEEEEcC
Confidence 4567766553 36666 4688899999999988764
No 276
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=30.92 E-value=3.4e+02 Score=27.18 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=25.5
Q ss_pred ccEEEeC-CCCCCCcHHHHHHHHcCCceEEc-CCcccccce
Q 007247 477 ADFILIP-SRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTV 515 (611)
Q Consensus 477 aDv~l~p-S~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v 515 (611)
=|++++. .+.|. +++.||--.|+|||+- |+..-++.|
T Consensus 157 Pd~l~ViDp~~e~--iAv~EA~klgIPVvAlvDTn~dpd~V 195 (252)
T COG0052 157 PDVLFVIDPRKEK--IAVKEANKLGIPVVALVDTNCDPDGV 195 (252)
T ss_pred CCEEEEeCCcHhH--HHHHHHHHcCCCEEEEecCCCCCccC
Confidence 4665543 33354 8899999999999984 555555555
No 277
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=30.90 E-value=35 Score=34.63 Aligned_cols=31 Identities=32% Similarity=0.431 Sum_probs=26.8
Q ss_pred ccccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
.+||.|-+-..|...|.+.||+|++++.+.+
T Consensus 3 iTGgTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 3 ITGGTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred EeccccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 4688997778899999999999999997744
No 278
>PRK07454 short chain dehydrogenase; Provisional
Probab=30.77 E-value=54 Score=31.98 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=24.0
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||.++|+.- .||+| ..+++.|.++|++|.++...
T Consensus 5 ~~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 5 SMPRALITGA------SSGIG---KATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4666666521 34444 55788899999999988754
No 279
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=30.70 E-value=4.1e+02 Score=25.73 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=37.2
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc-ChHHHH-HHHHHccEEEeCCC
Q 007247 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 485 (611)
Q Consensus 416 g~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~l~pS~ 485 (611)
..+..++.++.+.+..++++=+--..+.-.+.++++.+++++-..+-+.. +.+.+. .+-++|++++-|..
T Consensus 18 ~~e~a~~~~~al~~~Gi~~iEit~~t~~a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aGA~FivsP~~ 89 (204)
T TIGR01182 18 DVDDALPLAKALIEGGLRVLEVTLRTPVALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAGAQFIVSPGL 89 (204)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcCCCEEECCCC
Confidence 44555566665555333333333233335566777776776544455544 333333 35567777777764
No 280
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=30.52 E-value=1.9e+02 Score=26.93 Aligned_cols=67 Identities=10% Similarity=0.093 Sum_probs=43.7
Q ss_pred cCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeC
Q 007247 415 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (611)
Q Consensus 415 Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~p 483 (611)
=.+.+.++|+..+..+++..+++-+|+.++...++.+... +..+..++ ........+.+.||-|+.-
T Consensus 89 ~Dv~laIDame~~~~~~iD~~vLvSgD~DF~~Lv~~lre~-G~~V~v~g-~~~~ts~~L~~acd~FI~L 155 (160)
T TIGR00288 89 VDVRMAVEAMELIYNPNIDAVALVTRDADFLPVINKAKEN-GKETIVIG-AEPGFSTALQNSADIAIIL 155 (160)
T ss_pred ccHHHHHHHHHHhccCCCCEEEEEeccHhHHHHHHHHHHC-CCEEEEEe-CCCCChHHHHHhcCeEEeC
Confidence 4578899999888555554444444554588888887765 55566555 2323344688999988754
No 281
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=30.19 E-value=16 Score=40.40 Aligned_cols=27 Identities=26% Similarity=0.294 Sum_probs=21.2
Q ss_pred cHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 102 GLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
+--..+..++++|+++||+|+++++..
T Consensus 11 SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 11 SHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp -SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 334467889999999999999999863
No 282
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=30.07 E-value=52 Score=35.25 Aligned_cols=40 Identities=33% Similarity=0.423 Sum_probs=29.7
Q ss_pred CCCceEEEEeeeecCccccccHH--HHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.++|+|+.|+.. .||+| +...+||.+|+++|++|.+|=..
T Consensus 101 g~~~~vI~v~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~D 142 (387)
T TIGR03453 101 GEHLQVIAVTNF------KGGSGKTTTAAHLAQYLALRGYRVLAIDLD 142 (387)
T ss_pred CCCceEEEEEcc------CCCcCHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 457887777753 46655 45677999999999999999543
No 283
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=30.06 E-value=48 Score=33.35 Aligned_cols=38 Identities=26% Similarity=0.457 Sum_probs=26.6
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCc
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~ 130 (611)
||||+.+.. ... ..| +..|+++|.+ +|+|+|++|...+
T Consensus 1 M~ILvtNDD-Gi~--apG----l~aL~~~l~~-~~~V~VvAP~~~~ 38 (253)
T PRK13933 1 MNILLTNDD-GIN--AEG----INTLAELLSK-YHEVIIVAPENQR 38 (253)
T ss_pred CeEEEEcCC-CCC--Chh----HHHHHHHHHh-CCcEEEEccCCCC
Confidence 899988876 221 223 6667888865 6899999998443
No 284
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=29.86 E-value=63 Score=32.30 Aligned_cols=36 Identities=28% Similarity=0.437 Sum_probs=27.4
Q ss_pred ceEEEEeeeecCcccccc--HHHHhccchHHHHhCCCeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGG--LGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG--~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
||++.|.+ + .|| ..+++-+|+.+|++.|++|.+|=.
T Consensus 1 M~~iai~s---~---kGGvG~TTltAnLA~aL~~~G~~VlaID~ 38 (243)
T PF06564_consen 1 MKVIAIVS---P---KGGVGKTTLTANLAWALARLGESVLAIDL 38 (243)
T ss_pred CcEEEEec---C---CCCCCHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 77666664 2 355 556788899999999999999943
No 285
>PLN02306 hydroxypyruvate reductase
Probab=29.77 E-value=1.2e+02 Score=32.55 Aligned_cols=45 Identities=24% Similarity=0.247 Sum_probs=34.8
Q ss_pred HHHHHHHHccEEEe--CCCCCCCcH---HHHHHHHcCCceEEcCCccccc
Q 007247 469 LAHMIIAGADFILI--PSRFEPCGL---IQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 469 ~~~~i~~~aDv~l~--pS~~E~~gl---~~lEAma~G~PvI~s~~gg~~e 513 (611)
.+.++++.||++++ |...|+.++ ..++.|--|.-+|-+.-|++.|
T Consensus 229 ~L~ell~~sDiV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVD 278 (386)
T PLN02306 229 SMEEVLREADVISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVID 278 (386)
T ss_pred CHHHHHhhCCEEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccC
Confidence 36689999999776 444466554 5899999999999998888665
No 286
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=29.66 E-value=48 Score=33.22 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=27.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
||||+-+.. .. -..-+.-|+++|. .+++|+|++|..+
T Consensus 1 mrILlTNDD-Gi------~a~Gi~aL~~al~-~~~dV~VVAP~~~ 37 (252)
T COG0496 1 MRILLTNDD-GI------HAPGIRALARALR-EGADVTVVAPDRE 37 (252)
T ss_pred CeEEEecCC-cc------CCHHHHHHHHHHh-hCCCEEEEccCCC
Confidence 889888865 12 2223566888888 8999999999844
No 287
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=29.39 E-value=59 Score=33.58 Aligned_cols=34 Identities=32% Similarity=0.358 Sum_probs=25.6
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
++|||+||.. |.+-..++..|.+.||+|.++...
T Consensus 3 ~~m~I~iiG~-----------G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILGA-----------GAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEECc-----------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4699998874 223455889999999999888644
No 288
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=29.32 E-value=1.4e+02 Score=32.01 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=49.9
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEeccc--------ChHHHHHHHHHccEEE--eCCCCC----CC---cHHH
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------NIPLAHMIIAGADFIL--IPSRFE----PC---GLIQ 493 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--------~~~~~~~i~~~aDv~l--~pS~~E----~~---gl~~ 493 (611)
+-++-|+|-|. +-+.+.+....++-++...-.. ....+.++++.||+++ +|...+ +. +-..
T Consensus 116 gktvGIIG~G~--IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~~li~~~~ 193 (378)
T PRK15438 116 DRTVGIVGVGN--VGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYKTLHLADEKL 193 (378)
T ss_pred CCEEEEECcCH--HHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcccccccccCHHH
Confidence 44566666665 4455555444444333332111 0113567999999988 565543 54 4468
Q ss_pred HHHHHcCCceEEcCCccccc
Q 007247 494 LHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 494 lEAma~G~PvI~s~~gg~~e 513 (611)
+++|.-|.-+|.+.-|++.|
T Consensus 194 l~~mk~gailIN~aRG~vVD 213 (378)
T PRK15438 194 IRSLKPGAILINACRGAVVD 213 (378)
T ss_pred HhcCCCCcEEEECCCchhcC
Confidence 89999999999998887665
No 289
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=29.25 E-value=39 Score=32.88 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=31.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
|.+++++. +| ..|-..+..+|+++|.+++|+|..++..|
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy 39 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDY 39 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhh
Confidence 45566664 35 46788899999999999999999998653
No 290
>PRK05246 glutathione synthetase; Provisional
Probab=29.10 E-value=43 Score=34.83 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=30.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||+|+-. |.....--.+....|+.+..++||+|.+++|.
T Consensus 2 ~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 2 MKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred ceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 89999984 43333333345666999999999999999987
No 291
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=28.95 E-value=3.1e+02 Score=27.80 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=63.3
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccC
Q 007247 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (611)
Q Consensus 388 ~~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (611)
+++.+++|-. ....+.|.-++ ....+..|.-+..|.. ++++.+|+-.+.+...+.++++.++.|+ +..+....
T Consensus 23 e~l~~~Yg~~---~I~h~tyPdnf--~~e~EttIskI~~lAdDp~mKaIVv~q~vpGt~~af~kIkekRpD-Il~ia~~~ 96 (275)
T PF12683_consen 23 EELIKKYGDV---MIKHVTYPDNF--MSEQETTISKIVSLADDPDMKAIVVSQAVPGTAEAFRKIKEKRPD-ILLIAGEP 96 (275)
T ss_dssp HHHHHHHHHH---EEEEEE--TTG--GGCHHHHHHHHHGGGG-TTEEEEEEE-SS---HHHHHHHHHH-TT-SEEEESS-
T ss_pred HHHHHHhCcc---eEEEEeCCCcc--cchHHHHHHHHHHhccCCCccEEEEeCCCcchHHHHHHHHhcCCC-eEEEcCCC
Confidence 4455566521 11223343343 3457888888888776 8999999999887788899999998887 55555555
Q ss_pred hHHHHHHHHHccEEEeCCCCCCCcHHHH-HHHHcCCceEE
Q 007247 467 IPLAHMIIAGADFILIPSRFEPCGLIQL-HAMRYGTVPIV 505 (611)
Q Consensus 467 ~~~~~~i~~~aDv~l~pS~~E~~gl~~l-EAma~G~PvI~ 505 (611)
.+....+-..+|+.+.+.. ...|..+. -|-.+|.-..+
T Consensus 97 ~EDp~~i~~~aDi~~~~D~-~~~G~~i~~~Ak~mGAktFV 135 (275)
T PF12683_consen 97 HEDPEVISSAADIVVNPDE-ISRGYTIVWAAKKMGAKTFV 135 (275)
T ss_dssp -S-HHHHHHHSSEEEE--H-HHHHHHHHHHHHHTT-S-EE
T ss_pred cCCHHHHhhccCeEeccch-hhccHHHHHHHHHcCCceEE
Confidence 5666678889999988553 33444433 33445555444
No 292
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=28.94 E-value=51 Score=33.73 Aligned_cols=31 Identities=29% Similarity=0.515 Sum_probs=23.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
|||++++. |++| ..++..|++.||+|++++.
T Consensus 1 mkI~IiG~--------G~iG---~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA--------GAVG---GTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC--------CHHH---HHHHHHHHHCCCceEEEec
Confidence 78888874 4444 3367778899999999976
No 293
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=28.86 E-value=72 Score=32.59 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=29.0
Q ss_pred ccCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.+.+++||++. ||.|.+-..|+..|..+||+|.++--.
T Consensus 23 ~p~~~lrI~it----------GgaGFIgSHLvdkLm~egh~VIa~Dn~ 60 (350)
T KOG1429|consen 23 KPSQNLRILIT----------GGAGFIGSHLVDKLMTEGHEVIALDNY 60 (350)
T ss_pred cCCCCcEEEEe----------cCcchHHHHHHHHHHhcCCeEEEEecc
Confidence 44556888864 566666777999999999999998543
No 294
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=28.74 E-value=63 Score=30.76 Aligned_cols=32 Identities=34% Similarity=0.539 Sum_probs=21.1
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++++..| =|+. +|..|++.||+|..+=..
T Consensus 1 M~I~ViGlGy------vGl~-----~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 1 MKIAVIGLGY------VGLP-----LAAALAEKGHQVIGVDID 32 (185)
T ss_dssp -EEEEE--ST------THHH-----HHHHHHHTTSEEEEE-S-
T ss_pred CEEEEECCCc------chHH-----HHHHHHhCCCEEEEEeCC
Confidence 8999988653 2333 788899999999998543
No 295
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=28.66 E-value=52 Score=33.08 Aligned_cols=38 Identities=26% Similarity=0.396 Sum_probs=26.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCc
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~ 130 (611)
||||+.+..- + ...| +..|.++|++ +|+|+|++|...+
T Consensus 1 M~ILlTNDDG--i-~a~G----i~aL~~~l~~-~~~V~VvAP~~~q 38 (253)
T PRK13935 1 MNILVTNDDG--I-TSPG----IIILAEYLSE-KHEVFVVAPDKER 38 (253)
T ss_pred CeEEEECCCC--C-CCHH----HHHHHHHHHh-CCcEEEEccCCCC
Confidence 7899888651 1 1222 5567788865 5899999998543
No 296
>PRK05993 short chain dehydrogenase; Provisional
Probab=28.52 E-value=62 Score=32.55 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=23.5
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 4 ~k~vlItGa------sggiG---~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 4 KRSILITGC------SSGIG---AYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCEEEEeCC------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 455555531 46666 44788899999999888654
No 297
>PF02635 DrsE: DsrE/DsrF-like family; InterPro: IPR003787 Four small, soluble proteins (DsrE, DsrF, DsrH and DsrC) are encoded in the dsr gene region of the phototrophic sulphur bacterium Chromatium vinosum D. The dsrAB genes encoding dissimilatory sulphite reductase are part of the gene cluster, dsrABEFHCMK. The remaining proteins that are encoded are a transmembrane protein (DsrM) with similarity to haem-b-binding polypeptides and a soluble protein (DsrK) resembling [4Fe-4S]-cluster-containing heterodisulphide reductase from methanogenic archaea. DsrE is a small soluble protein involved in intracellular sulphur reduction [].; PDB: 1L1S_A 2HYB_B 2HY5_B 2PD2_B 3MC3_A 2D1P_H 1JX7_B 2FB6_A.
Probab=28.32 E-value=98 Score=26.31 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=27.9
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCC---CeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG---HRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G---h~V~vit~~ 127 (611)
|||++|... +|+ ..........++......| ++|.|+...
T Consensus 1 k~v~~i~~~-~p~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~g 43 (122)
T PF02635_consen 1 KKVFFIVTS-GPY--DDERAKIALRLANAAAAMGDYGHDVVVFFHG 43 (122)
T ss_dssp EEEEEEE-S--TT--TBSHHHHHHHHHHHHHHTTHTTSEEEEEE-G
T ss_pred CEEEEEecC-CCC--CCHHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Confidence 688888875 454 2223566777888899999 999998754
No 298
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=28.30 E-value=71 Score=28.63 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=28.4
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEE
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (611)
|||+++-.. .+|-.+.+...++..|.+.|++|.++
T Consensus 1 M~i~IiY~S-----~tGnTe~iA~~ia~~l~~~g~~v~~~ 35 (140)
T TIGR01754 1 MRILLAYLS-----LSGNTEEVAFMIQDYLQKDGHEVDIL 35 (140)
T ss_pred CeEEEEEEC-----CCChHHHHHHHHHHHHhhCCeeEEec
Confidence 788777642 47889999999999999999998743
No 299
>PRK05866 short chain dehydrogenase; Provisional
Probab=28.27 E-value=80 Score=32.22 Aligned_cols=37 Identities=30% Similarity=0.496 Sum_probs=24.3
Q ss_pred cCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
++++++|++++. .||+| ..+++.|+++|++|.++..+
T Consensus 37 ~~~~k~vlItGa-------sggIG---~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 37 DLTGKRILLTGA-------SSGIG---EAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CCCCCEEEEeCC-------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 344455554442 35666 45778899999999888654
No 300
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=28.17 E-value=55 Score=35.79 Aligned_cols=35 Identities=31% Similarity=0.380 Sum_probs=26.4
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
.+.|||++. ||.|.+-..|++.|.++||+|.++..
T Consensus 118 ~~~mkILVT----------GatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 118 RKRLRIVVT----------GGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred cCCCEEEEE----------CCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 456887664 55565566789999999999998863
No 301
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=28.16 E-value=57 Score=33.26 Aligned_cols=32 Identities=41% Similarity=0.700 Sum_probs=23.9
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 1 m~I~IiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILGA--------GAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 78888873 4444 44677789999999999864
No 302
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=27.94 E-value=57 Score=32.79 Aligned_cols=27 Identities=33% Similarity=0.581 Sum_probs=21.5
Q ss_pred cccHH--HHhccchHHHHhCCCeEEEEee
Q 007247 100 TGGLG--DVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit~ 126 (611)
.||+| +.+.+||.+|+++|++|.+|=.
T Consensus 10 KGGVGKTT~~~nLA~~la~~G~kVLliD~ 38 (270)
T PRK13185 10 KGGIGKSTTSSNLSAAFAKLGKKVLQIGC 38 (270)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEec
Confidence 36655 4568899999999999999943
No 303
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=27.75 E-value=3.7e+02 Score=23.56 Aligned_cols=80 Identities=18% Similarity=0.059 Sum_probs=52.9
Q ss_pred ceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcccccceec--CcceEEecccccccccCC
Q 007247 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVD 535 (611)
Q Consensus 458 ~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~~~~~~~~v~ 535 (611)
.+......+.+.....+..+|+++..+.. .+.-.+++++ -++-.|++...|...+--+ ...|+.+- -++
T Consensus 20 ~v~~~~~~~~~~~~~~l~~~d~ii~~~~~-~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~-------n~~ 90 (133)
T PF00389_consen 20 EVEFCDSPSEEELAERLKDADAIIVGSGT-PLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVT-------NVP 90 (133)
T ss_dssp EEEEESSSSHHHHHHHHTTESEEEESTTS-TBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEE-------E-T
T ss_pred eEEEeCCCCHHHHHHHhCCCeEEEEcCCC-CcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEE-------EeC
Confidence 37766677788888899999999976553 5778889888 8888999888886543111 23345441 114
Q ss_pred ccCHHHHHHHH
Q 007247 536 PVDVAAVSTTV 546 (611)
Q Consensus 536 ~~d~~~la~~i 546 (611)
....+++|+..
T Consensus 91 g~~~~aVAE~a 101 (133)
T PF00389_consen 91 GYNAEAVAEHA 101 (133)
T ss_dssp TTTHHHHHHHH
T ss_pred CcCCcchhccc
Confidence 45566666666
No 304
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=27.68 E-value=37 Score=33.46 Aligned_cols=26 Identities=31% Similarity=0.468 Sum_probs=21.9
Q ss_pred cHHHHhccchHHHHhCCCeEEEEeec
Q 007247 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|.|++-..+|+.|.++||+|+++-..
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 55667788999999999999999644
No 305
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=27.64 E-value=5.8e+02 Score=25.24 Aligned_cols=105 Identities=11% Similarity=0.038 Sum_probs=61.6
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC--c---hhHHHHHHHHHHCCCceEEecccChHHHHHHHHHcc
Q 007247 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--K---PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (611)
Q Consensus 404 ~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~--~---~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 478 (611)
+++..+++..--=++-....++.+..++-+++++-+.. . .|.+..++.-.+++-.+..+-.. +...+.+..||
T Consensus 4 ll~s~~~~~~~~~l~~~~~~~~~~~~~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~--~d~~~~l~~ad 81 (233)
T PRK05282 4 LLLSNSTLPGTGYLEHALPLIAELLAGRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV--ADPVAAIENAE 81 (233)
T ss_pred EEEecCCCCCCchHHHHHHHHHHHHcCCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc--hhhHHHHhcCC
Confidence 45556666552223555566666544566777777754 2 24444444444555444433222 22346789999
Q ss_pred EEEeCCC--------CC--CCcHHHHHHHHcCCceEEcCCcc
Q 007247 479 FILIPSR--------FE--PCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 479 v~l~pS~--------~E--~~gl~~lEAma~G~PvI~s~~gg 510 (611)
++.++-= +. ++--.+-|+...|+|++.++.|.
T Consensus 82 ~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~G~~~~G~SAGA 123 (233)
T PRK05282 82 AIFVGGGNTFQLLKQLYERGLLAPIREAVKNGTPYIGWSAGA 123 (233)
T ss_pred EEEECCccHHHHHHHHHHCCcHHHHHHHHHCCCEEEEECHHH
Confidence 8877641 12 23334678999999999998776
No 306
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=27.59 E-value=5.1e+02 Score=26.77 Aligned_cols=87 Identities=20% Similarity=0.226 Sum_probs=53.4
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChH
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (611)
.+++.+|-- +...|.|+|-+.+..=..-++.++.++ ++++.++++..-+..+.+.+...+.+.++... +
T Consensus 140 Ti~e~~g~l---~g~~va~vGD~~~~~v~~Sl~~~~a~~---g~~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~-----~ 208 (301)
T TIGR00670 140 TIYEEFGRL---DGLKIALVGDLKYGRTVHSLAEALTRF---GVEVYLISPEELRMPKEILEELKAKGIKVRET-----E 208 (301)
T ss_pred HHHHHhCCC---CCCEEEEEccCCCCcHHHHHHHHHHHc---CCEEEEECCccccCCHHHHHHHHHcCCEEEEE-----C
Confidence 455666632 346899999776556577788888887 68999999754212223333333344333321 2
Q ss_pred HHHHHHHHccEEEeCCCC
Q 007247 469 LAHMIIAGADFILIPSRF 486 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~~ 486 (611)
.+.+.+++||++...+..
T Consensus 209 d~~~a~~~aDvvyt~~~~ 226 (301)
T TIGR00670 209 SLEEVIDEADVLYVTRIQ 226 (301)
T ss_pred CHHHHhCCCCEEEECCcc
Confidence 244679999988776643
No 307
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=27.51 E-value=79 Score=32.34 Aligned_cols=44 Identities=11% Similarity=-0.052 Sum_probs=30.7
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+++|||++++....|. ..=.-.....+.++|.+.||+|.++-+.
T Consensus 2 ~~~~~v~~~~g~~~~~--~~~~~~s~~~i~~al~~~g~~v~~i~~~ 45 (304)
T PRK01372 2 KMFGKVAVLMGGTSAE--REVSLNSGAAVLAALREAGYDAHPIDPG 45 (304)
T ss_pred CCCcEEEEEeCCCCCC--ceEeHHhHHHHHHHHHHCCCEEEEEecC
Confidence 4467999998654443 1112224577999999999999999654
No 308
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=27.46 E-value=71 Score=28.23 Aligned_cols=36 Identities=19% Similarity=0.035 Sum_probs=24.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++..+- ++.......+.+.|.+.|++|.++...
T Consensus 1 k~i~l~vtG-------s~~~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTG-------SIAAYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-S-------SGGGGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEEC-------HHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 677777642 122223677899999999999988754
No 309
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=27.44 E-value=67 Score=32.03 Aligned_cols=37 Identities=32% Similarity=0.549 Sum_probs=26.7
Q ss_pred ceEEEEeeeecCccccccHH--HHhccchHHHH-hCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALA-ANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~-~~Gh~V~vit~~ 127 (611)
|+|+-|... .||+| +...+||.+|+ ..||+|.++=..
T Consensus 2 ~~iI~v~n~------KGGvGKTT~a~nLa~~La~~~~~kVLliDlD 41 (259)
T COG1192 2 MKIIAVANQ------KGGVGKTTTAVNLAAALAKRGGKKVLLIDLD 41 (259)
T ss_pred CEEEEEEec------CCCccHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 676666654 57765 45667999999 566999999544
No 310
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=27.36 E-value=4.1e+02 Score=24.83 Aligned_cols=78 Identities=12% Similarity=0.132 Sum_probs=43.4
Q ss_pred HHHHHHHHhccc--CCcEEEEEeCCCchh-HHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHH
Q 007247 418 DILAAAIPHFIK--ENVQIIVLGTGKKPM-EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL 494 (611)
Q Consensus 418 d~li~a~~~l~~--~~~~lvivG~g~~~~-~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~l 494 (611)
...++.++++.. .+-+++|+|.|. + ...+.....+.+.++..... ..+.+...++.||+++...-... +.--
T Consensus 29 ~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r-~~~~l~~~l~~aDiVIsat~~~~--ii~~ 103 (168)
T cd01080 29 AGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHS-KTKNLKEHTKQADIVIVAVGKPG--LVKG 103 (168)
T ss_pred HHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEEC-CchhHHHHHhhCCEEEEcCCCCc--eecH
Confidence 344555555532 578899999986 3 33233333333323433333 33456679999999998776533 3333
Q ss_pred HHHHcC
Q 007247 495 HAMRYG 500 (611)
Q Consensus 495 EAma~G 500 (611)
|.+.-|
T Consensus 104 ~~~~~~ 109 (168)
T cd01080 104 DMVKPG 109 (168)
T ss_pred HHccCC
Confidence 444334
No 311
>PRK06753 hypothetical protein; Provisional
Probab=27.24 E-value=51 Score=34.77 Aligned_cols=30 Identities=30% Similarity=0.546 Sum_probs=23.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEe
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (611)
|+|++|+.- | +|+. +|..|+++|++|+|+=
T Consensus 1 ~~V~IvGgG--~----aGl~-----~A~~L~~~g~~v~v~E 30 (373)
T PRK06753 1 MKIAIIGAG--I----GGLT-----AAALLQEQGHEVKVFE 30 (373)
T ss_pred CEEEEECCC--H----HHHH-----HHHHHHhCCCcEEEEe
Confidence 789998852 2 5555 7888999999999984
No 312
>CHL00175 minD septum-site determining protein; Validated
Probab=27.23 E-value=87 Score=31.67 Aligned_cols=37 Identities=24% Similarity=0.283 Sum_probs=27.4
Q ss_pred CceEEEEeeeecCcccccc--HHHHhccchHHHHhCCCeEEEEee
Q 007247 84 GLNILFVGTEVAPWSKTGG--LGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG--~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
.+||+.|+.. .|| -..+..+|+.+|++.|++|.+|=.
T Consensus 14 ~~~vi~v~s~------KGGvGKTt~a~nLA~~La~~g~~vlliD~ 52 (281)
T CHL00175 14 MSRIIVITSG------KGGVGKTTTTANLGMSIARLGYRVALIDA 52 (281)
T ss_pred CceEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 3566666653 344 456778899999999999999843
No 313
>PRK07308 flavodoxin; Validated
Probab=27.14 E-value=73 Score=28.74 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=23.3
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEe
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit 125 (611)
+|..+.+...++..|.+.|++|.+.-
T Consensus 12 tGnTe~iA~~ia~~l~~~g~~~~~~~ 37 (146)
T PRK07308 12 TGNTEEIADIVADKLRELGHDVDVDE 37 (146)
T ss_pred CchHHHHHHHHHHHHHhCCCceEEEe
Confidence 69999999999999999999988764
No 314
>PRK08163 salicylate hydroxylase; Provisional
Probab=27.04 E-value=58 Score=34.69 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=26.0
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
++++|++|+.- .+|+. +|..|++.|++|+|+=.
T Consensus 3 ~~~~V~IvGaG------iaGl~-----~A~~L~~~g~~v~v~Er 35 (396)
T PRK08163 3 KVTPVLIVGGG------IGGLA-----AALALARQGIKVKLLEQ 35 (396)
T ss_pred CCCeEEEECCc------HHHHH-----HHHHHHhCCCcEEEEee
Confidence 46899999963 35666 78889999999999943
No 315
>PLN02572 UDP-sulfoquinovose synthase
Probab=26.95 E-value=78 Score=34.62 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=23.8
Q ss_pred cCCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEe
Q 007247 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (611)
..++|||++. ||.|..-..|++.|.++||+|.++.
T Consensus 44 ~~~~k~VLVT----------GatGfIGs~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 44 SSKKKKVMVI----------GGDGYCGWATALHLSKRGYEVAIVD 78 (442)
T ss_pred cccCCEEEEE----------CCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 3445676544 4444444568899999999999874
No 316
>PRK06436 glycerate dehydrogenase; Provisional
Probab=26.94 E-value=1.7e+02 Score=30.29 Aligned_cols=44 Identities=30% Similarity=0.357 Sum_probs=32.2
Q ss_pred HHHHHHHccEEEe--CCCCCCC---cHHHHHHHHcCCceEEcCCccccc
Q 007247 470 AHMIIAGADFILI--PSRFEPC---GLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 470 ~~~i~~~aDv~l~--pS~~E~~---gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
+.++++.||++++ |..-|+. +-..+++|.-|.-+|.+..|++.+
T Consensus 167 l~ell~~aDiv~~~lp~t~~T~~li~~~~l~~mk~ga~lIN~sRG~~vd 215 (303)
T PRK06436 167 PEDIMKKSDFVLISLPLTDETRGMINSKMLSLFRKGLAIINVARADVVD 215 (303)
T ss_pred HHHHHhhCCEEEECCCCCchhhcCcCHHHHhcCCCCeEEEECCCccccC
Confidence 5578999999776 4444443 456899998898888888777554
No 317
>PRK05920 aromatic acid decarboxylase; Validated
Probab=26.62 E-value=96 Score=30.10 Aligned_cols=37 Identities=22% Similarity=0.074 Sum_probs=26.8
Q ss_pred CCceEEEEeeeecCccccccHH-HHhccchHHHHhCCCeEEEEeec
Q 007247 83 VGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+++||++--+ ||.+ .....+.+.|.+.|++|.++...
T Consensus 2 ~~krIllgIT--------Gsiaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 2 KMKRIVLAIT--------GASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred CCCEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 3577776653 3333 45667899999999999999865
No 318
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=26.53 E-value=78 Score=28.83 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=30.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEe
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (611)
|||++|... .+|..+.+...++..|.+.|++|.+..
T Consensus 2 ~ki~Ivy~S-----~tGnTe~vA~~i~~~l~~~~~~~~~~~ 37 (151)
T COG0716 2 MKILIVYGS-----RTGNTEKVAEIIAEELGADGFEVDIDI 37 (151)
T ss_pred CeEEEEEEc-----CCCcHHHHHHHHHHHhccCCceEEEee
Confidence 788888753 479999999999999999999995554
No 319
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=26.53 E-value=56 Score=32.99 Aligned_cols=26 Identities=27% Similarity=0.639 Sum_probs=21.3
Q ss_pred cccHH--HHhccchHHHHhCCCeEEEEe
Q 007247 100 TGGLG--DVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (611)
.||+| +...+||.+|+++|++|.++=
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVllvD 36 (273)
T PRK13232 9 KGGIGKSTTTQNLTAALSTMGNKILLVG 36 (273)
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCeEEEe
Confidence 46665 456789999999999999994
No 320
>PRK11104 hemG protoporphyrinogen oxidase; Provisional
Probab=26.34 E-value=68 Score=30.24 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=29.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
|||+++-.. ..|-...+...++..|.. |++|.++-.
T Consensus 1 MkilIvY~S-----~~G~T~~iA~~Ia~~l~~-g~~v~~~~~ 36 (177)
T PRK11104 1 MKTLILYSS-----RDGQTRKIASYIASELKE-GIQCDVVNL 36 (177)
T ss_pred CcEEEEEEC-----CCChHHHHHHHHHHHhCC-CCeEEEEEh
Confidence 788887642 578899999999999988 999988753
No 321
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=26.30 E-value=1.1e+02 Score=26.80 Aligned_cols=38 Identities=11% Similarity=-0.043 Sum_probs=29.1
Q ss_pred ceEEEEeeeecCccccccHHHHh--ccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~--~~La~~L~~~Gh~V~vit~~ 127 (611)
|||+.|+.. | .|-...++ ..|.++-.++||++.|=+-.
T Consensus 3 mkivaVtac--p---~GiAht~lAAeaL~kAA~~~G~~i~VE~qg 42 (114)
T PRK10427 3 AYLVAVTAC--V---SGVAHTYMAAERLEKLCQLEKWGVKIETQG 42 (114)
T ss_pred ceEEEEeeC--C---CcHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 899999873 6 46666666 55778888899999987744
No 322
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=26.08 E-value=96 Score=27.54 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=26.7
Q ss_pred eEEEEeeeecCccccccHHHHhccchHHHHhCCCeE-EEEe
Q 007247 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIA 125 (611)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V-~vit 125 (611)
|++++... +|+ .+-.+.-...++.++.+.||+| .|+-
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf 38 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFF 38 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 46666655 676 4446667888999999999995 5554
No 323
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=26.04 E-value=8.8e+02 Score=26.42 Aligned_cols=82 Identities=7% Similarity=0.032 Sum_probs=49.4
Q ss_pred CcHHHHHHHHcCCceEEcCCcccccceecC----cceEEecccccccccCCccCHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 007247 489 CGLIQLHAMRYGTVPIVASTGGLVDTVEEG----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 564 (611)
Q Consensus 489 ~gl~~lEAma~G~PvI~s~~gg~~e~v~~g----~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~ 564 (611)
.|.++-=+...|+|+....+|--.+-++.- -...+ ..-+|+..|++.+++.++. +...++.++
T Consensus 255 ~G~~lsi~~~~~~PI~fi~~Ge~i~dl~~f~p~~~~~~i----------Lg~gD~~~l~e~~~~~~~~---~~~~~~~~~ 321 (428)
T TIGR00959 255 GGAALSVRSVTGKPIKFIGVGEKIDDLEPFHPERMASRI----------LGMGDILSLVEKAQEVVDE---EEAKKLAEK 321 (428)
T ss_pred ccHHHHHHHHHCcCEEEEeCCCChhhCccCCHHHHHHHH----------hCCCChHHHHHHHHHhhCH---HHHHHHHHH
Confidence 566666667789999988776433322211 01111 1456777777777776542 333444444
Q ss_pred HHHhhCCchHHHHHHHHHH
Q 007247 565 GMAQDLSWKGPAKKWEETL 583 (611)
Q Consensus 565 ~~~~~fsw~~~a~~~~~~~ 583 (611)
-....|+.+.+.+++..+-
T Consensus 322 ~~~~~f~l~d~~~q~~~~~ 340 (428)
T TIGR00959 322 MKKGQFDLEDFLEQLRQIK 340 (428)
T ss_pred HHhCCCCHHHHHHHHHHHH
Confidence 4557899988888887664
No 324
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=25.84 E-value=64 Score=32.38 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=26.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
||||+.+..- - .+.-+..|.++|.+. |+|+|++|...
T Consensus 1 M~ILlTNDDG-i------~a~Gi~aL~~~l~~~-~~V~VvAP~~~ 37 (250)
T PRK00346 1 MRILLTNDDG-I------HAPGIRALAEALREL-ADVTVVAPDRE 37 (250)
T ss_pred CeEEEECCCC-C------CChhHHHHHHHHHhC-CCEEEEeCCCC
Confidence 7899888651 1 122366788889888 79999999844
No 325
>PF13263 PHP_C: PHP-associated; PDB: 2Z4G_B 2YXO_B 2YZ5_A 3DCP_B.
Probab=25.79 E-value=27 Score=26.06 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=18.8
Q ss_pred HHHHHHcCCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHH
Q 007247 493 QLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (611)
Q Consensus 493 ~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~ 547 (611)
.-=|..+|+|+++.+..-..+.|..+.+-|-. +..++++|.++|+
T Consensus 8 ~~~A~~~~lp~~~gSDAH~~~~vG~~~t~~~~----------~~~s~~~l~~alr 52 (56)
T PF13263_consen 8 AELAEKYGLPFTGGSDAHFLEEVGRGYTEFEG----------PIRSPEELLEALR 52 (56)
T ss_dssp HHHHHHTT--EEEE--BSSGGGTTTTHHHH-------------------------
T ss_pred HHHHHHcCCCeEeEEcccChhhcCCEeeeccc----------ccccccccccccc
Confidence 34467899999999887777777666555532 4556677777665
No 326
>PRK06180 short chain dehydrogenase; Provisional
Probab=25.78 E-value=70 Score=32.12 Aligned_cols=25 Identities=36% Similarity=0.566 Sum_probs=18.7
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||+| ..+++.|+++|++|.++..+
T Consensus 13 sggiG---~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 13 SSGFG---RALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CChHH---HHHHHHHHhCcCEEEEEeCC
Confidence 35555 45777899999999988754
No 327
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=25.62 E-value=1.5e+02 Score=30.97 Aligned_cols=44 Identities=20% Similarity=0.380 Sum_probs=31.0
Q ss_pred HHHHHHHccEEEe--CCCCCCC---cHHHHHHHHcCCceEEcCCccccc
Q 007247 470 AHMIIAGADFILI--PSRFEPC---GLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 470 ~~~i~~~aDv~l~--pS~~E~~---gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
+.++++.||++++ |...++. +-..+..|.-|..+|.+.-|++.+
T Consensus 192 l~ell~~aDiVil~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~~vd 240 (330)
T PRK12480 192 VKEAIKDADIISLHVPANKESYHLFDKAMFDHVKKGAILVNAARGAVIN 240 (330)
T ss_pred HHHHHhcCCEEEEeCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCccccC
Confidence 4568999998765 4443333 344777788899889888887664
No 328
>PRK06179 short chain dehydrogenase; Provisional
Probab=25.54 E-value=74 Score=31.65 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=19.2
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||+| ..+++.|+++|++|.+++.+
T Consensus 13 sg~iG---~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 13 SSGIG---RATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 35555 46888899999999888754
No 329
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=25.53 E-value=66 Score=32.25 Aligned_cols=28 Identities=36% Similarity=0.452 Sum_probs=19.4
Q ss_pred cccHH--HHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||+| ++..+||-+|+++|++|-++=..
T Consensus 9 KGGvGKSTva~~lA~aLa~~G~kVg~lD~D 38 (261)
T PF09140_consen 9 KGGVGKSTVAVNLAVALARMGKKVGLLDLD 38 (261)
T ss_dssp STTTTHHHHHHHHHHHHHCTT--EEEEE--
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 56665 45667999999999999999544
No 330
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=25.32 E-value=65 Score=32.60 Aligned_cols=37 Identities=22% Similarity=0.177 Sum_probs=26.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
||||+.+..- - .+.-+..|+++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDDG-i------~apGi~aL~~al~~~g-~V~VvAP~~e 37 (266)
T PRK13934 1 MKILVTNDDG-V------HSPGLRLLYEFVSPLG-EVDVVAPETP 37 (266)
T ss_pred CeEEEEcCCC-C------CCHHHHHHHHHHHhCC-cEEEEccCCC
Confidence 7898888651 1 1123566888888887 8999999844
No 331
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=25.31 E-value=51 Score=30.61 Aligned_cols=28 Identities=29% Similarity=0.339 Sum_probs=24.2
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||.|.+-..+++.|.++||+|++++.+
T Consensus 4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~ 31 (183)
T PF13460_consen 4 FGATGFVGRALAKQLLRRGHEVTALVRS 31 (183)
T ss_dssp ETTTSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 4677777778999999999999999976
No 332
>PLN02778 3,5-epimerase/4-reductase
Probab=25.23 E-value=67 Score=32.95 Aligned_cols=32 Identities=22% Similarity=0.120 Sum_probs=22.9
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEE
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (611)
.+|||++.+ |.|..=..|++.|.++||+|++.
T Consensus 8 ~~~kiLVtG----------~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 8 ATLKFLIYG----------KTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCeEEEEC----------CCCHHHHHHHHHHHhCCCEEEEe
Confidence 458877654 44544556888999999999754
No 333
>PRK05693 short chain dehydrogenase; Provisional
Probab=25.21 E-value=67 Score=32.13 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=23.6
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
||.++|+.- .||+| ..+++.|+++|++|.+++.+
T Consensus 1 mk~vlItGa------sggiG---~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITGC------SSGIG---RALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEecC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566666532 45666 45778889999999888654
No 334
>PRK06924 short chain dehydrogenase; Provisional
Probab=25.01 E-value=70 Score=31.33 Aligned_cols=25 Identities=28% Similarity=0.551 Sum_probs=18.7
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.||+| ..+++.|+++|++|.+++..
T Consensus 10 sggiG---~~ia~~l~~~g~~V~~~~r~ 34 (251)
T PRK06924 10 SQGLG---EAIANQLLEKGTHVISISRT 34 (251)
T ss_pred CchHH---HHHHHHHHhcCCEEEEEeCC
Confidence 35555 45789999999999887643
No 335
>PRK06849 hypothetical protein; Provisional
Probab=25.00 E-value=73 Score=34.04 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=27.5
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.++|+|++++... | ....+++.|.++||+|.++...
T Consensus 2 ~~~~~VLI~G~~~-~---------~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 2 NTKKTVLITGARA-P---------AALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCCEEEEeCCCc-H---------HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999887542 2 3455899999999999999765
No 336
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=24.92 E-value=4.3e+02 Score=26.79 Aligned_cols=93 Identities=9% Similarity=-0.035 Sum_probs=43.4
Q ss_pred cCHHHHHHHHHhcccCCcEE-EEEeCCCc---hhHHHHHHHHHHCCCceEEecccChHHHH----HHHHHccEEEeCCCC
Q 007247 415 KGSDILAAAIPHFIKENVQI-IVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSRF 486 (611)
Q Consensus 415 Kg~d~li~a~~~l~~~~~~l-vivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~~~~~----~i~~~aDv~l~pS~~ 486 (611)
--+..-++.+.++.-.-=++ ++..+... ...+.+++...+++-++....--+.+.+. .+-...|+++++...
T Consensus 115 ~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~ 194 (294)
T PF04392_consen 115 PPIEKQLELIKKLFPDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIELVEIPVPSSEDLEQALEALAEKVDALYLLPDN 194 (294)
T ss_dssp --HHHHHHHHHHHSTT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-EEEEEEESSGGGHHHHHHHHCTT-SEEEE-S-H
T ss_pred cCHHHHHHHHHHhCCCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCEEEEEecCcHhHHHHHHHHhhccCCEEEEECCc
Confidence 34455555555553211234 34444432 34556666666666444333222333222 344567887776532
Q ss_pred ---CCCcHHHHHHHHcCCceEEcC
Q 007247 487 ---EPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 487 ---E~~gl~~lEAma~G~PvI~s~ 507 (611)
..+...+..+..+++|+++..
T Consensus 195 ~~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 195 LVDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHHTHHHHHHHCCCTT--EEESS
T ss_pred chHhHHHHHHHHHHhcCCCEEECC
Confidence 344445667778999999976
No 337
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=24.83 E-value=68 Score=31.23 Aligned_cols=26 Identities=19% Similarity=0.100 Sum_probs=17.9
Q ss_pred cHHHHhccchHHHHhCCCeEEEEeec
Q 007247 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|.+..-..+++.|+++|++|.++..+
T Consensus 9 a~g~iG~~l~~~l~~~g~~v~~~~~~ 34 (247)
T PRK09730 9 GSRGIGRATALLLAQEGYTVAVNYQQ 34 (247)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 33333455888899999999876533
No 338
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=24.74 E-value=71 Score=31.59 Aligned_cols=26 Identities=38% Similarity=0.594 Sum_probs=21.1
Q ss_pred cccHH--HHhccchHHHHhCCCeEEEEe
Q 007247 100 TGGLG--DVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (611)
.||+| ....+||.+|++.|++|.++=
T Consensus 10 kGGvGKTt~a~~lA~~la~~g~~vlliD 37 (261)
T TIGR01968 10 KGGVGKTTTTANLGTALARLGKKVVLID 37 (261)
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEEE
Confidence 35554 477889999999999999984
No 339
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....
Probab=24.46 E-value=1.3e+02 Score=26.61 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=13.9
Q ss_pred ChHHHHHHHHHccEEEeC
Q 007247 466 NIPLAHMIIAGADFILIP 483 (611)
Q Consensus 466 ~~~~~~~i~~~aDv~l~p 483 (611)
..+...+++..||++|+-
T Consensus 67 ~~~~~~~~l~~aDlvl~i 84 (137)
T PF00205_consen 67 GSPAANEALEQADLVLAI 84 (137)
T ss_dssp SCHHHHHHHHHSSEEEEE
T ss_pred CCHHHHHHhcCCCEEEEE
Confidence 456667899999998864
No 340
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=24.31 E-value=50 Score=32.09 Aligned_cols=29 Identities=31% Similarity=0.365 Sum_probs=22.9
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEeecCC
Q 007247 101 GGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (611)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (611)
+|.|..=..|+..|++.||+|++-+.+.+
T Consensus 7 ~GtGniG~alA~~~a~ag~eV~igs~r~~ 35 (211)
T COG2085 7 IGTGNIGSALALRLAKAGHEVIIGSSRGP 35 (211)
T ss_pred eccChHHHHHHHHHHhCCCeEEEecCCCh
Confidence 45555566799999999999999987743
No 341
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=24.31 E-value=71 Score=32.27 Aligned_cols=27 Identities=30% Similarity=0.511 Sum_probs=21.9
Q ss_pred cccHHH--HhccchHHHHhCCCeEEEEee
Q 007247 100 TGGLGD--VLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 100 ~GG~~~--~~~~La~~L~~~Gh~V~vit~ 126 (611)
.||+|. .+.+|+.+|+++|++|.+|=.
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID~ 37 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVGC 37 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEec
Confidence 477665 567899999999999999943
No 342
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=24.21 E-value=1.5e+02 Score=32.08 Aligned_cols=45 Identities=29% Similarity=0.394 Sum_probs=33.2
Q ss_pred HHHHHHHHccEEEe--CCCCCCC---cHHHHHHHHcCCceEEcCCccccc
Q 007247 469 LAHMIIAGADFILI--PSRFEPC---GLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 469 ~~~~i~~~aDv~l~--pS~~E~~---gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
.+.++++.||++.+ |..-|+. +-..+..|--|.-+|.+.-|++.|
T Consensus 196 ~l~ell~~sDiVslh~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~~vd 245 (409)
T PRK11790 196 SLEELLAQSDVVSLHVPETPSTKNMIGAEELALMKPGAILINASRGTVVD 245 (409)
T ss_pred CHHHHHhhCCEEEEcCCCChHHhhccCHHHHhcCCCCeEEEECCCCcccC
Confidence 35679999999765 4444554 445888888898888888887654
No 343
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=24.12 E-value=1e+02 Score=32.57 Aligned_cols=77 Identities=13% Similarity=0.015 Sum_probs=47.4
Q ss_pred HHHHHHccEEEeC--CCCCCCcH-HHHHHHHcCCceEEcC--CcccccceecCcceEEecccccccccCCccCHHHHHHH
Q 007247 471 HMIIAGADFILIP--SRFEPCGL-IQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (611)
Q Consensus 471 ~~i~~~aDv~l~p--S~~E~~gl-~~lEAma~G~PvI~s~--~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 545 (611)
..+++..-+.+.- |..+.+=. ++.+|+.+|+.+|+-. ...+.+++.. ..-+.+ -+-.++++||+.
T Consensus 222 ~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~-~SfI~~---------~df~s~~~La~y 291 (349)
T PF00852_consen 222 LELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPP-NSFIHV---------DDFKSPKELADY 291 (349)
T ss_dssp HHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-G-GGSEEG---------GGSSSHHHHHHH
T ss_pred cccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCC-CCccch---------hcCCCHHHHHHH
Confidence 3466666666643 22233322 5789999999999877 5566667665 233332 144689999999
Q ss_pred HHHHHHhcCHHHHH
Q 007247 546 VRRALATYGTQALA 559 (611)
Q Consensus 546 i~~ll~~~~~~~~~ 559 (611)
|..+.+| ++.+.
T Consensus 292 l~~l~~n--~~~Y~ 303 (349)
T PF00852_consen 292 LKYLDKN--DELYN 303 (349)
T ss_dssp HHHHHT---HHHHH
T ss_pred HHHHhcC--HHHHh
Confidence 9999887 55544
No 344
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=24.09 E-value=1.4e+02 Score=30.91 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=32.0
Q ss_pred HHHHHHHHccEEEe--CCCCCCCcH---HHHHHHHcCCceEEcCCccccc
Q 007247 469 LAHMIIAGADFILI--PSRFEPCGL---IQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 469 ~~~~i~~~aDv~l~--pS~~E~~gl---~~lEAma~G~PvI~s~~gg~~e 513 (611)
.+.++++.||++++ |...++-++ ..++.|--|.-+|...-|++.+
T Consensus 183 ~l~e~l~~aDvvv~~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~vVd 232 (312)
T PRK15469 183 ELSAFLSQTRVLINLLPNTPETVGIINQQLLEQLPDGAYLLNLARGVHVV 232 (312)
T ss_pred cHHHHHhcCCEEEECCCCCHHHHHHhHHHHHhcCCCCcEEEECCCccccC
Confidence 45678999999876 444444443 5788888888888887777554
No 345
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=24.09 E-value=2.8e+02 Score=23.50 Aligned_cols=73 Identities=10% Similarity=0.082 Sum_probs=44.9
Q ss_pred EEEEeCCC--chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCC-CCcHHHHHHHHcCCceEEcC
Q 007247 434 IIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFE-PCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 434 lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E-~~gl~~lEAma~G~PvI~s~ 507 (611)
++++|.|- .-..+.+++..++.+..+. ....+.......+..+|+++.....- -+.-.--.+-..|+||.+.+
T Consensus 4 ll~C~~GaSSs~la~km~~~a~~~gi~~~-i~a~~~~e~~~~~~~~Dvill~PQv~~~~~~i~~~~~~~~ipv~~I~ 79 (99)
T cd05565 4 LVLCAGGGTSGLLANALNKGAKERGVPLE-AAAGAYGSHYDMIPDYDLVILAPQMASYYDELKKDTDRLGIKLVTTT 79 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCcEE-EEEeeHHHHHHhccCCCEEEEcChHHHHHHHHHHHhhhcCCCEEEeC
Confidence 46667764 3466777888877664444 23445555667888999988766421 12222223445688988776
No 346
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=24.08 E-value=3e+02 Score=29.60 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007247 537 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 587 (611)
Q Consensus 537 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~~l~ 587 (611)
+|..+|.++|+.+.++ ++..+++++++ +.+.++.+.+..-|..++.+..
T Consensus 268 ~d~sdL~~~v~w~~~~--~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 268 DDLSDLEEKVEWLNAH--DDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEYA 319 (395)
T ss_pred cchhhHHHHhhhcccC--hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 4789999999988777 66666666666 4578888888887777776544
No 347
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=23.92 E-value=88 Score=32.67 Aligned_cols=75 Identities=24% Similarity=0.453 Sum_probs=45.3
Q ss_pred ceEEEEeeeecCccccccHHH--HhccchHHHHhCCCeEEEEeecCCc-ccccCCCceEEEEEeCCeeeEEEEEEeeecC
Q 007247 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAPRYDQ-YKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (611)
|+|+|++. .||+|. ....+|-.|++.|.+|.+++....+ ..+. +...++.....+. .+
T Consensus 2 ~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~d~------f~~elg~~~~~I~------~n 62 (322)
T COG0003 2 TRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLGDV------FDLELGHDPRKVG------PN 62 (322)
T ss_pred cEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCchHhh------hccccCCchhhcC------CC
Confidence 68888885 589888 5666778899999888888765322 1221 1222222111111 46
Q ss_pred ceEEEEeCccchhhhcC
Q 007247 162 VDRVFVDHPWFLAKVWG 178 (611)
Q Consensus 162 v~~~~i~~~~~~~~~~~ 178 (611)
+...-+|....+.+.|.
T Consensus 63 L~a~eiD~~~~l~ey~~ 79 (322)
T COG0003 63 LDALELDPEKALEEYWD 79 (322)
T ss_pred CceeeecHHHHHHHHHH
Confidence 66677776666666553
No 348
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=23.89 E-value=78 Score=32.95 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=25.2
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
..|||++|.. |. +-..++..|++.||+|+++...
T Consensus 3 ~~m~I~iIG~--------G~---mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 3 HGMRVAVLGA--------GA---WGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred CCCeEEEECc--------CH---HHHHHHHHHHHCCCeEEEEeCC
Confidence 4689999874 22 3344778899999999998764
No 349
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=23.81 E-value=5.7e+02 Score=23.43 Aligned_cols=82 Identities=10% Similarity=0.099 Sum_probs=40.9
Q ss_pred HHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc-----cccceecCcceEEecccccccccCCccCHHHHHHHHH
Q 007247 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (611)
Q Consensus 473 i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~ 547 (611)
-+..+|+++..+..+.....+.+....+.+|-+.+... ++-++..+. +.++ . -..+..-.++..|+
T Consensus 67 dl~~a~lViaaT~d~e~N~~i~~~a~~~~~vn~~d~~~~~~f~~pa~v~~~~--l~ia-i------sT~G~sP~la~~lr 137 (157)
T PRK06719 67 DIKDAHLIYAATNQHAVNMMVKQAAHDFQWVNVVSDGTESSFHTPGVIRNDE--YVVT-I------STSGKDPSFTKRLK 137 (157)
T ss_pred cCCCceEEEECCCCHHHHHHHHHHHHHCCcEEECCCCCcCcEEeeeEEEECC--eEEE-E------ECCCcChHHHHHHH
Confidence 46788888887665444444443333355555554433 233344333 2221 0 02344556777777
Q ss_pred HHHHhcCHHHHHHHHH
Q 007247 548 RALATYGTQALAEMMK 563 (611)
Q Consensus 548 ~ll~~~~~~~~~~~~~ 563 (611)
+-+++.=++.+.++++
T Consensus 138 ~~ie~~l~~~~~~~a~ 153 (157)
T PRK06719 138 QELTSILPKLIKKISR 153 (157)
T ss_pred HHHHHHhhHHHHHHHh
Confidence 7666532344444443
No 350
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=23.79 E-value=8.2e+02 Score=25.66 Aligned_cols=84 Identities=10% Similarity=0.104 Sum_probs=50.0
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCC----chhHHHHHHHHHHCCCceEEecc
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 464 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~ 464 (611)
.+++.+|-- +...|.|+|-+.. .=..-++.++..+ ++.+.++++.. +++.+..+++.+..+.++...
T Consensus 145 Ti~e~~g~l---~g~~va~vGd~~~-~v~~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~-- 215 (331)
T PRK02102 145 TMKEHFGPL---KGLKLAYVGDGRN-NMANSLMVGGAKL---GMDVRICAPKELWPEEELVALAREIAKETGAKITIT-- 215 (331)
T ss_pred HHHHHhCCC---CCCEEEEECCCcc-cHHHHHHHHHHHc---CCEEEEECCcccccCHHHHHHHHHHHHHcCCeEEEE--
Confidence 455566632 3468999998742 2345566666666 78999999743 123334444554444333321
Q ss_pred cChHHHHHHHHHccEEEeCC
Q 007247 465 FNIPLAHMIIAGADFILIPS 484 (611)
Q Consensus 465 ~~~~~~~~i~~~aDv~l~pS 484 (611)
+.+.+.+.+||++..-.
T Consensus 216 ---~d~~ea~~~aDvvyt~~ 232 (331)
T PRK02102 216 ---EDPEEAVKGADVIYTDV 232 (331)
T ss_pred ---cCHHHHhCCCCEEEEcC
Confidence 22445799999988753
No 351
>PRK00211 sulfur relay protein TusC; Validated
Probab=23.69 E-value=1e+02 Score=26.98 Aligned_cols=39 Identities=23% Similarity=0.055 Sum_probs=27.8
Q ss_pred ceEEEEeeeecCcccccc-HHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG-~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||+||... +|+ |. .+.-..+++-+++..+++|.++-..
T Consensus 2 ~ki~~i~~~-~Py---g~~~~~eaLd~ala~~a~~~~v~vff~~ 41 (119)
T PRK00211 2 KRIAFVFRQ-APH---GTASGREGLDALLATSAFTEDIGVFFID 41 (119)
T ss_pred ceEEEEecC-CCC---CCHHHHHHHHHHHHHhcccCCeeEEEEh
Confidence 579999886 786 33 3434444577888888999888754
No 352
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=23.31 E-value=1e+02 Score=30.49 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=31.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|+|+.|... +..|-...+..|++.|.++|++|-++-..
T Consensus 1 m~vi~ivG~-----~gsGKTtl~~~l~~~L~~~G~~V~viK~~ 38 (229)
T PRK14494 1 MRAIGVIGF-----KDSGKTTLIEKILKNLKERGYRVATAKHT 38 (229)
T ss_pred CeEEEEECC-----CCChHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 777777752 35788889999999999999999999653
No 353
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=23.21 E-value=80 Score=29.19 Aligned_cols=37 Identities=41% Similarity=0.505 Sum_probs=30.0
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecC
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (611)
+++||++|+. +-++++.+++..+++.|.+|.+++|..
T Consensus 1 ~gl~i~~vGD---------~~~rv~~Sl~~~~~~~g~~~~~~~P~~ 37 (158)
T PF00185_consen 1 KGLKIAYVGD---------GHNRVAHSLIELLAKFGMEVVLIAPEG 37 (158)
T ss_dssp TTEEEEEESS---------TTSHHHHHHHHHHHHTTSEEEEESSGG
T ss_pred CCCEEEEECC---------CCChHHHHHHHHHHHcCCEEEEECCCc
Confidence 3678888883 235688899999999999999999873
No 354
>PRK08605 D-lactate dehydrogenase; Validated
Probab=23.07 E-value=2.8e+02 Score=29.08 Aligned_cols=44 Identities=23% Similarity=0.313 Sum_probs=32.1
Q ss_pred HHHHHHHccEEEe--CCCCCCCc---HHHHHHHHcCCceEEcCCccccc
Q 007247 470 AHMIIAGADFILI--PSRFEPCG---LIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 470 ~~~i~~~aDv~l~--pS~~E~~g---l~~lEAma~G~PvI~s~~gg~~e 513 (611)
+.++++.||++++ |...++-+ -..++.|.-|..+|.+..|+..+
T Consensus 194 l~ell~~aDvIvl~lP~t~~t~~li~~~~l~~mk~gailIN~sRG~~vd 242 (332)
T PRK08605 194 IEEAVEGADIVTLHMPATKYNHYLFNADLFKHFKKGAVFVNCARGSLVD 242 (332)
T ss_pred HHHHHHhCCEEEEeCCCCcchhhhcCHHHHhcCCCCcEEEECCCCcccC
Confidence 4568999999875 45444433 35688888899888888887654
No 355
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=23.02 E-value=96 Score=30.59 Aligned_cols=25 Identities=32% Similarity=0.537 Sum_probs=19.2
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+|++| ..|+++|.++||+|++++..
T Consensus 25 SG~iG---~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 25 TGQLG---KIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred chHHH---HHHHHHHHhCCCEEEEEECc
Confidence 45555 55888999999999999743
No 356
>PLN00198 anthocyanidin reductase; Provisional
Probab=22.99 E-value=94 Score=32.25 Aligned_cols=27 Identities=30% Similarity=0.241 Sum_probs=19.5
Q ss_pred ccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
||.|..-..|++.|.++||+|.++...
T Consensus 16 G~~GfIG~~l~~~L~~~g~~V~~~~r~ 42 (338)
T PLN00198 16 GGTGFLASLLIKLLLQKGYAVNTTVRD 42 (338)
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 444444456889999999999877643
No 357
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=22.93 E-value=2.4e+02 Score=26.96 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=22.8
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCC--eEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh--~V~vit~~ 127 (611)
|||+++.+ |.|.....+..++.+.++ +|.++.+.
T Consensus 1 ~riail~s---------g~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLIS---------GNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEEc---------CCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 68888874 344567778888887666 56655444
No 358
>PRK10569 NAD(P)H-dependent FMN reductase; Provisional
Probab=22.65 E-value=1.2e+02 Score=28.95 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=27.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
|||++|+.. |. +.+=....+......+.+.|++|+++-.
T Consensus 1 mkIl~I~GS--pr-~~S~t~~l~~~~~~~l~~~g~ev~~idL 39 (191)
T PRK10569 1 MRVITLAGS--PR-FPSRSSALLEYAREWLNGLGVEVYHWNL 39 (191)
T ss_pred CEEEEEEcC--CC-CCChHHHHHHHHHHHHHhCCCEEEEEEc
Confidence 899999875 42 2233444555666778889999998863
No 359
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=22.57 E-value=88 Score=33.51 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=25.8
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
..++|++|+.- | +|+. +|..|++.|++|+|+=..
T Consensus 17 ~~~dV~IvGaG--~----aGl~-----~A~~L~~~G~~v~v~E~~ 50 (415)
T PRK07364 17 LTYDVAIVGGG--I----VGLT-----LAAALKDSGLRIALIEAQ 50 (415)
T ss_pred cccCEEEECcC--H----HHHH-----HHHHHhcCCCEEEEEecC
Confidence 35789999852 2 5555 788899999999999543
No 360
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=22.52 E-value=94 Score=30.70 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=24.0
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
+|+|++++. +|++| ..+++.|.++||+|++++..
T Consensus 17 ~~~ilItGa-------sG~iG---~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 17 TKTVFVAGA-------TGRTG---KRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEecC
Confidence 477877764 35555 44677788899999888644
No 361
>PRK10446 ribosomal protein S6 modification protein; Provisional
Probab=22.42 E-value=81 Score=32.36 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=26.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++++.+..-+ ....+.+++.++||+|.++.+.
T Consensus 1 m~~~i~~~~~s~~--------s~~~~~~a~~~~g~~v~~i~~~ 35 (300)
T PRK10446 1 MKIAILSRDGTLY--------SCKRLREAAIQRGHLVEILDPL 35 (300)
T ss_pred CeEEEEecCCcch--------hHHHHHHHHHHcCCeEEEEehH
Confidence 7899999763211 3456899999999999999755
No 362
>PRK04148 hypothetical protein; Provisional
Probab=22.28 E-value=1e+02 Score=27.77 Aligned_cols=31 Identities=19% Similarity=0.180 Sum_probs=22.4
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
++||+-|+.-+ | ..++..|++.||+|+.+=.
T Consensus 17 ~~kileIG~Gf-------G-----~~vA~~L~~~G~~ViaIDi 47 (134)
T PRK04148 17 NKKIVELGIGF-------Y-----FKVAKKLKESGFDVIVIDI 47 (134)
T ss_pred CCEEEEEEecC-------C-----HHHHHHHHHCCCEEEEEEC
Confidence 47888888531 1 2367889999999999843
No 363
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=22.23 E-value=94 Score=30.84 Aligned_cols=43 Identities=26% Similarity=0.213 Sum_probs=29.8
Q ss_pred cCCCceEEEEeeeecCccc-cccHHHHhccchHHHHhCCCeEEEEeecCCc
Q 007247 81 CGVGLNILFVGTEVAPWSK-TGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (611)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~-~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~ 130 (611)
.+..++|+.|.++ |.+. .|..| ....++++|++|.++|-..+.
T Consensus 7 ~~~~~~vL~v~aH--PDDe~~g~gg-----tla~~~~~G~~V~v~~lT~Ge 50 (237)
T COG2120 7 MLDPLRVLVVFAH--PDDEEIGCGG-----TLAKLAARGVEVTVVCLTLGE 50 (237)
T ss_pred cccCCcEEEEecC--CcchhhccHH-----HHHHHHHCCCeEEEEEccCCc
Confidence 3557899999985 7643 23223 344568999999999976443
No 364
>COG0718 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.08 E-value=3e+02 Score=23.67 Aligned_cols=51 Identities=22% Similarity=0.255 Sum_probs=37.5
Q ss_pred CCceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 500 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 500 G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
-+-+-.+..||++.++-.|..-+. +...|.++++|.|.+-|.+-|..++++
T Consensus 30 ~~ev~g~aggGlVtV~~~G~~ev~--~v~Idp~l~dpeD~E~LeDLi~aA~nd 80 (105)
T COG0718 30 QKEVTGKAGGGLVTVTINGKGEVK--SVEIDPSLLDPEDKEMLEDLILAAFND 80 (105)
T ss_pred hcEEeeecCCcEEEEEEeCCCcEE--EEEeCHHHcCcccHHHHHHHHHHHHHH
Confidence 344555667778888777654332 456677889999999999999988876
No 365
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=21.91 E-value=80 Score=32.95 Aligned_cols=33 Identities=33% Similarity=0.368 Sum_probs=24.7
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 2 ~mkI~IiG~--------G~mG---~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 2 MARICVLGA--------GSIG---CYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CceEEEECC--------CHHH---HHHHHHHHhcCCcEEEEecH
Confidence 489999874 4344 34777899999999998753
No 366
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=21.83 E-value=88 Score=31.68 Aligned_cols=27 Identities=30% Similarity=0.650 Sum_probs=21.6
Q ss_pred cccHH--HHhccchHHHHhCCCeEEEEee
Q 007247 100 TGGLG--DVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit~ 126 (611)
.||+| +.+.+||.+|+++|++|.+|=.
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVLliD~ 37 (279)
T PRK13230 9 KGGIGKSTTVCNIAAALAESGKKVLVVGC 37 (279)
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEEEee
Confidence 46665 4567899999999999999843
No 367
>PRK06703 flavodoxin; Provisional
Probab=21.70 E-value=1.3e+02 Score=27.27 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=29.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
|||+++-.. .+|....+...++..|.+.|++|.++-.
T Consensus 2 mkv~IiY~S-----~tGnT~~iA~~ia~~l~~~g~~v~~~~~ 38 (151)
T PRK06703 2 AKILIAYAS-----MSGNTEDIADLIKVSLDAFDHEVVLQEM 38 (151)
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhcCCceEEEeh
Confidence 676666542 3688999999999999999999988754
No 368
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=21.70 E-value=3.6e+02 Score=27.11 Aligned_cols=99 Identities=22% Similarity=0.339 Sum_probs=62.3
Q ss_pred ccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCC-CceEEe--cccChHHHHHHH-----HHccEEEeCCC
Q 007247 414 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGV--AKFNIPLAHMII-----AGADFILIPSR 485 (611)
Q Consensus 414 ~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~--~~~~~~~~~~i~-----~~aDv~l~pS~ 485 (611)
.-|.|++...++...+++.++-++|+.+.-.++..+.+..++| .++.+. +.|..++...++ .++|++++---
T Consensus 91 v~G~Dl~~~Ll~~a~~~~~~vfllGgkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~~~i~~~I~~s~pdil~VgmG 170 (253)
T COG1922 91 VAGTDLVEALLKRAAEEGKRVFLLGGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEEEAIVERIAASGPDILLVGMG 170 (253)
T ss_pred CChHHHHHHHHHHhCccCceEEEecCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhHHHHHHHHHhcCCCEEEEeCC
Confidence 5688888888888877789999999877777888888888888 344432 455444333333 35688776432
Q ss_pred ---CCCCcHHHHHHH-HcCCceEEcCCccccccee
Q 007247 486 ---FEPCGLIQLHAM-RYGTVPIVASTGGLVDTVE 516 (611)
Q Consensus 486 ---~E~~gl~~lEAm-a~G~PvI~s~~gg~~e~v~ 516 (611)
.|-| +..-. .+. +.|.-..||.-|++.
T Consensus 171 ~P~QE~w---i~~~~~~~~-~~v~igVGg~fDv~s 201 (253)
T COG1922 171 VPRQEIW---IARNRQQLP-VAVAIGVGGSFDVFS 201 (253)
T ss_pred CchhHHH---HHHhHHhcC-CceEEeccceEEEec
Confidence 2322 11111 223 345556677777764
No 369
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=21.35 E-value=98 Score=33.59 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=25.4
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|..|||++|+.-+ -| ..+|..|++.||+|.++-..
T Consensus 1 m~~~kI~VIGlG~------~G-----~~~A~~La~~G~~V~~~D~~ 35 (415)
T PRK11064 1 MSFETISVIGLGY------IG-----LPTAAAFASRQKQVIGVDIN 35 (415)
T ss_pred CCccEEEEECcch------hh-----HHHHHHHHhCCCEEEEEeCC
Confidence 3458899887532 22 33889999999999988654
No 370
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=21.26 E-value=82 Score=34.76 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=23.3
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|||++++.- ..|++ -|.+|+++||+|+++=.+
T Consensus 1 ~rVai~GaG------~AgL~-----~a~~La~~g~~vt~~ea~ 32 (485)
T COG3349 1 MRVAIAGAG------LAGLA-----AAYELADAGYDVTLYEAR 32 (485)
T ss_pred CeEEEEccc------HHHHH-----HHHHHHhCCCceEEEecc
Confidence 677777742 23444 578899999999999654
No 371
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=21.15 E-value=1.4e+02 Score=30.10 Aligned_cols=39 Identities=18% Similarity=0.243 Sum_probs=29.4
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
+.|++.|++. .| .-|-..+..+||.+|++.|++|.+|=.
T Consensus 102 ~~~vi~vts~-~~---g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 102 GRKALAVVSA-KS---GEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCeEEEEECC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 4566666643 12 457888899999999999999999943
No 372
>PLN02206 UDP-glucuronate decarboxylase
Probab=21.13 E-value=89 Score=34.22 Aligned_cols=33 Identities=33% Similarity=0.493 Sum_probs=25.2
Q ss_pred CCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEe
Q 007247 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (611)
+.|||++. ||.|.+-..|++.|.++||+|.++.
T Consensus 118 ~~~kILVT----------GatGfIGs~Lv~~Ll~~G~~V~~ld 150 (442)
T PLN02206 118 KGLRVVVT----------GGAGFVGSHLVDRLMARGDSVIVVD 150 (442)
T ss_pred CCCEEEEE----------CcccHHHHHHHHHHHHCcCEEEEEe
Confidence 56887754 5556555668899999999999875
No 373
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=21.07 E-value=63 Score=29.84 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=19.9
Q ss_pred HHHhccchHHHHhCCCeEEEEeec
Q 007247 104 GDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 104 ~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|.+....++.|.+.|++|+||+|.
T Consensus 22 G~va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 22 GKIAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred CHHHHHHHHHHHhCCCEEEEEcCc
Confidence 345677889999999999999765
No 374
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=21.06 E-value=8.5e+02 Score=24.46 Aligned_cols=98 Identities=12% Similarity=0.065 Sum_probs=56.7
Q ss_pred EcCcccccCHHHHHHHHHhcccCCcEEEE-------------EeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHH
Q 007247 408 IGRLEEQKGSDILAAAIPHFIKENVQIIV-------------LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (611)
Q Consensus 408 iGrl~~~Kg~d~li~a~~~l~~~~~~lvi-------------vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 474 (611)
++...--...+.+++.++++++-..++.. -|.| .+-.+.+++...+++-.+. .-.++...+..+.
T Consensus 29 IAGpc~ie~~~~~~~~A~~lk~~~~k~~r~~~~KpRtsp~s~~g~g-~~gl~~l~~~~~~~Gl~~~-t~~~d~~~~~~l~ 106 (260)
T TIGR01361 29 IAGPCSVESEEQIMETARFVKEAGAKILRGGAFKPRTSPYSFQGLG-EEGLKLLRRAADEHGLPVV-TEVMDPRDVEIVA 106 (260)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHHHhccCceecCCCCCccccccH-HHHHHHHHHHHHHhCCCEE-EeeCChhhHHHHH
Confidence 33344445667778877777652233222 1222 1233446666666663222 2344555565566
Q ss_pred HHccEEEeCCCCCCCcHHHHHHH-HcCCceEEcCC
Q 007247 475 AGADFILIPSRFEPCGLIQLHAM-RYGTVPIVAST 508 (611)
Q Consensus 475 ~~aDv~l~pS~~E~~gl~~lEAm-a~G~PvI~s~~ 508 (611)
.-+|++-++|+. ..-..++++. ..|+||+.+..
T Consensus 107 ~~~d~lkI~s~~-~~n~~LL~~~a~~gkPVilk~G 140 (260)
T TIGR01361 107 EYADILQIGARN-MQNFELLKEVGKQGKPVLLKRG 140 (260)
T ss_pred hhCCEEEECccc-ccCHHHHHHHhcCCCcEEEeCC
Confidence 778999999973 3334455555 46999999874
No 375
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=21.06 E-value=1.2e+02 Score=27.22 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=22.2
Q ss_pred cccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
..|......+||..|++.|++|.++-..
T Consensus 11 g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 11 GVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp TSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 4678889999999999999998888654
No 376
>PRK08177 short chain dehydrogenase; Provisional
Probab=21.02 E-value=95 Score=29.95 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=23.2
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
||.++|+.- .||+| ..+++.|+++|++|.+++..
T Consensus 1 ~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 1 KRTALIIGA------SRGLG---LGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHhCCCEEEEEeCC
Confidence 455555532 35555 44688899999999988755
No 377
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=20.99 E-value=2.5e+02 Score=28.26 Aligned_cols=71 Identities=13% Similarity=0.167 Sum_probs=42.5
Q ss_pred CcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHHHcCCceEEcCCcc
Q 007247 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (611)
Q Consensus 431 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (611)
+++++.+-+.. .+..+++...++. .. +. ...+++..+|+++..+..+..--...+++..|+.+|+.+.|.
T Consensus 26 ~~elv~v~d~~---~~~a~~~a~~~~~--~~---~~--~~~ell~~~DvVvi~a~~~~~~~~~~~al~~Gk~Vvv~s~gA 95 (265)
T PRK13304 26 NAELYAFYDRN---LEKAENLASKTGA--KA---CL--SIDELVEDVDLVVECASVNAVEEVVPKSLENGKDVIIMSVGA 95 (265)
T ss_pred CeEEEEEECCC---HHHHHHHHHhcCC--ee---EC--CHHHHhcCCCEEEEcCChHHHHHHHHHHHHcCCCEEEEchHH
Confidence 56666555543 2334444444331 11 11 133455889999988765554445677889999999977765
Q ss_pred c
Q 007247 511 L 511 (611)
Q Consensus 511 ~ 511 (611)
+
T Consensus 96 l 96 (265)
T PRK13304 96 L 96 (265)
T ss_pred h
Confidence 4
No 378
>KOG4117 consensus Heat shock factor binding protein [Transcription; Posttranslational modification, protein turnover, chaperones]
Probab=20.98 E-value=4e+02 Score=20.58 Aligned_cols=54 Identities=13% Similarity=0.195 Sum_probs=39.9
Q ss_pred CccCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007247 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 589 (611)
Q Consensus 535 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~l~~~ 589 (611)
+|.+.+++...+..+|.+- ..++..|+.+.+..-=++....+.+++-+..++..
T Consensus 10 DpkNmq~LTs~vQ~lLQq~-QDkFQtMSDQII~RiDDM~~riDDLEKnIaDLm~q 63 (73)
T KOG4117|consen 10 DPKNMQDLTSVVQGLLQQT-QDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQ 63 (73)
T ss_pred CcccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 6778899999999999871 36888888887765555666666677666666653
No 379
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=20.83 E-value=76 Score=34.13 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=23.7
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCCC-eEEEEe
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH-RVMTIA 125 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh-~V~vit 125 (611)
|||++|..- .+|+. +|.+|+++|| +|+|+=
T Consensus 1 ~~V~IiGgG------iaGla-----~A~~L~~~g~~~v~v~E 31 (414)
T TIGR03219 1 LRVAIIGGG------IAGVA-----LALNLCKHSHLNVQLFE 31 (414)
T ss_pred CeEEEECCC------HHHHH-----HHHHHHhcCCCCEEEEe
Confidence 789998853 36666 8889999996 999984
No 380
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=20.78 E-value=2.3e+02 Score=27.33 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=23.0
Q ss_pred ceEEEEeeeecCccccccHHHHhccchHHHHhCC--CeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~ 127 (611)
|||+++.+ |.|.....+..++.+.+ ++|.++.+.
T Consensus 2 ~ki~vl~s---------g~gs~~~~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 2 KRIVVLAS---------GNGSNLQAIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred ceEEEEEc---------CCChhHHHHHHHHHcCCCCcEEEEEEec
Confidence 89999885 23446777888887765 566665444
No 381
>PRK00587 hypothetical protein; Provisional
Probab=20.77 E-value=3.1e+02 Score=23.27 Aligned_cols=48 Identities=15% Similarity=0.163 Sum_probs=35.9
Q ss_pred ceEEcCCcccccceecCcceEEecccccccccCCccCHHHHHHHHHHHHHh
Q 007247 502 VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (611)
Q Consensus 502 PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 552 (611)
-+-.+. ||++.+.-.|..-+. +...|.++++|+|++-+-+.|..++++
T Consensus 28 ~v~g~~-gGlVkV~~nG~~~i~--~i~Idp~lld~eD~E~LeDLI~aA~Nd 75 (99)
T PRK00587 28 EFDFDY-KKYILIKIKGNLNIE--KIEINKELIDPEDKETLQDMLREAINE 75 (99)
T ss_pred EEEEEc-CCeEEEEEEcCccEE--EEEECHHHcCCccHHHHHHHHHHHHHH
Confidence 344555 888888877754333 456677888999999999999888876
No 382
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=20.75 E-value=2.6e+02 Score=23.31 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=43.1
Q ss_pred EEEEeCCC--chhHHHHHHHHHHCCCceEEecccChHHHHHHHHHccEEEeCCCCCCCcHHHHHHH--HcCCceEEcCC
Q 007247 434 IIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAM--RYGTVPIVAST 508 (611)
Q Consensus 434 lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~l~pS~~E~~gl~~lEAm--a~G~PvI~s~~ 508 (611)
|+++|.|- .-+.+.+++...+.+-.+. ....+..........+|++++..... +-..-++.. .+|+||.+.+.
T Consensus 7 Ll~C~~G~sSS~l~~k~~~~~~~~gi~~~-v~a~~~~~~~~~~~~~Dvill~pqi~-~~~~~i~~~~~~~~ipv~~I~~ 83 (95)
T TIGR00853 7 LLLCAAGMSTSLLVNKMNKAAEEYGVPVK-IAAGSYGAAGEKLDDADVVLLAPQVA-YMLPDLKKETDKKGIPVEVING 83 (95)
T ss_pred EEECCCchhHHHHHHHHHHHHHHCCCcEE-EEEecHHHHHhhcCCCCEEEECchHH-HHHHHHHHHhhhcCCCEEEeCh
Confidence 56777774 3355667777776654332 22334444555678899988876532 123334433 45789988764
No 383
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=20.69 E-value=3.3e+02 Score=24.84 Aligned_cols=91 Identities=19% Similarity=0.156 Sum_probs=56.2
Q ss_pred CHHHHHHHHHhcccC---CcEEEEEeCCCchhHHHHHHHHHHCC-CceEEec--cc---ChH----HHHHHHHH--ccEE
Q 007247 416 GSDILAAAIPHFIKE---NVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVA--KF---NIP----LAHMIIAG--ADFI 480 (611)
Q Consensus 416 g~d~li~a~~~l~~~---~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~--~~---~~~----~~~~i~~~--aDv~ 480 (611)
--..++++..+|.+. .+..+++|+ .+...+.+++....++ +++.... .+ +.+ .+.++++. .|++
T Consensus 16 ~~~e~l~~A~~La~~~g~~v~av~~G~-~~~~~~~l~~~l~~~G~d~v~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~lV 94 (164)
T PF01012_consen 16 VSLEALEAARRLAEALGGEVTAVVLGP-AEEAAEALRKALAKYGADKVYHIDDPALAEYDPEAYADALAELIKEEGPDLV 94 (164)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEEET-CCCHHHHHHHHHHSTTESEEEEEE-GGGTTC-HHHHHHHHHHHHHHHT-SEE
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEEec-chhhHHHHhhhhhhcCCcEEEEecCccccccCHHHHHHHHHHHHHhcCCCEE
Confidence 345677777888762 688888994 2346677766666555 3343321 11 222 22345555 8999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007247 481 LIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (611)
Q Consensus 481 l~pS~~E~~gl~~lEAma~G~PvI~s~ 507 (611)
++|+...+-.+...=|..+|.|+++--
T Consensus 95 l~~~t~~g~~la~~lA~~L~~~~v~~v 121 (164)
T PF01012_consen 95 LFGSTSFGRDLAPRLAARLGAPLVTDV 121 (164)
T ss_dssp EEESSHHHHHHHHHHHHHHT-EEEEEE
T ss_pred EEcCcCCCCcHHHHHHHHhCCCccceE
Confidence 999987666677777888888877643
No 384
>PLN02527 aspartate carbamoyltransferase
Probab=20.57 E-value=9e+02 Score=24.97 Aligned_cols=87 Identities=15% Similarity=0.195 Sum_probs=51.2
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCCchhHHHHHHHHHHCCCceEEecccChH
Q 007247 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468 (611)
Q Consensus 389 ~~~~~~gl~~~~~~~~il~iGrl~~~Kg~d~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (611)
.+++.+|-- +...|.|+|-+...+=..-++.++..+ .++.+.++++..-+..+.+.+...+.+.++... .
T Consensus 141 Ti~e~~g~l---~g~kva~vGD~~~~rv~~Sl~~~~~~~--~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~-----~ 210 (306)
T PLN02527 141 TIQREIGRL---DGIKVGLVGDLANGRTVRSLAYLLAKY--EDVKIYFVAPDVVKMKDDIKDYLTSKGVEWEES-----S 210 (306)
T ss_pred HHHHHhCCc---CCCEEEEECCCCCChhHHHHHHHHHhc--CCCEEEEECCCccCCCHHHHHHHHHcCCEEEEE-----c
Confidence 455566632 336899999775434467778887776 478899998743112223333333333323221 2
Q ss_pred HHHHHHHHccEEEeCCC
Q 007247 469 LAHMIIAGADFILIPSR 485 (611)
Q Consensus 469 ~~~~i~~~aDv~l~pS~ 485 (611)
.+.+.+++||++.....
T Consensus 211 d~~~a~~~aDvvyt~~~ 227 (306)
T PLN02527 211 DLMEVASKCDVLYQTRI 227 (306)
T ss_pred CHHHHhCCCCEEEECCc
Confidence 23468999999887654
No 385
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=20.53 E-value=1e+02 Score=33.20 Aligned_cols=38 Identities=29% Similarity=0.290 Sum_probs=27.9
Q ss_pred CCCceEEEEeeeecCccccccHHH--HhccchHHHHhCCCeEEEEe
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIA 125 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit 125 (611)
.++++|+-|... .||+|. ...+||.+|+.+|++|.+|=
T Consensus 103 ~~~~~vIav~n~------KGGVGKTTta~nLA~~LA~~G~rVLlID 142 (387)
T PHA02519 103 DKNPVVLAVMSH------KGGVYKTSSAVHTAQWLALQGHRVLLIE 142 (387)
T ss_pred CCCceEEEEecC------CCCCcHHHHHHHHHHHHHhCCCcEEEEe
Confidence 345676666543 576654 56789999999999999984
No 386
>PF09198 T4-Gluco-transf: Bacteriophage T4 beta-glucosyltransferase; InterPro: IPR015281 Members of this family are DNA-modifying enzymes encoded by bacteriophage T4 that transfer glucose from uridine diphosphoglucose to 5-hydroxymethyl cytosine bases of phage T4 DNA []. ; PDB: 1J39_A 1SXQ_B 1NZF_A 1M5R_B 1JEJ_A 1JIV_A 1NZD_A 1NVK_A 2BGU_A 1JIU_A ....
Probab=20.47 E-value=2.1e+02 Score=19.06 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=19.4
Q ss_pred ceEEEEeee--ecCccccccHHHHhccchHHHHhCCCeEE
Q 007247 85 LNILFVGTE--VAPWSKTGGLGDVLGGLPPALAANGHRVM 122 (611)
Q Consensus 85 MkIl~v~~~--~~P~~~~GG~~~~~~~La~~L~~~Gh~V~ 122 (611)
|||++++-. .-.+ ++ -...-.-.|.+-+.++|.+|.
T Consensus 1 mkiai~n~gnni~~f-kt-~p~setiyl~~~~~~mgl~vd 38 (38)
T PF09198_consen 1 MKIAIINMGNNIQNF-KT-TPSSETIYLFKCISDMGLNVD 38 (38)
T ss_dssp -EEEEEESSS--SSS-SS-HHHHHHHHHHHHHHTTT-EEE
T ss_pred CeEEEEecCCceece-ee-cCccceEeHHHHHHHhCCCCC
Confidence 788888742 1111 11 122235567888999998874
No 387
>PRK08105 flavodoxin; Provisional
Probab=20.44 E-value=1.2e+02 Score=27.72 Aligned_cols=28 Identities=25% Similarity=0.177 Sum_probs=24.6
Q ss_pred ccccHHHHhccchHHHHhCCCeEEEEee
Q 007247 99 KTGGLGDVLGGLPPALAANGHRVMTIAP 126 (611)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (611)
.+|-.+.+...|+..|.+.|++|.++..
T Consensus 11 ~tGnte~~A~~l~~~l~~~g~~~~~~~~ 38 (149)
T PRK08105 11 VYGNALLVAEEAEAILTAQGHEVTLFED 38 (149)
T ss_pred CchHHHHHHHHHHHHHHhCCCceEEech
Confidence 3788999999999999999999998764
No 388
>PRK07102 short chain dehydrogenase; Provisional
Probab=20.26 E-value=1e+02 Score=30.13 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=17.3
Q ss_pred HhccchHHHHhCCCeEEEEeec
Q 007247 106 VLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 106 ~~~~La~~L~~~Gh~V~vit~~ 127 (611)
.-..+++.|.++|++|.++...
T Consensus 13 iG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 13 IARACARRYAAAGARLYLAARD 34 (243)
T ss_pred HHHHHHHHHHhcCCEEEEEeCC
Confidence 3356888899999999888654
No 389
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=20.10 E-value=1.1e+02 Score=30.58 Aligned_cols=35 Identities=31% Similarity=0.550 Sum_probs=25.9
Q ss_pred ceEEEEeeeecCccccccHH--HHhccchHHHHhCCCeEEEEeec
Q 007247 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (611)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit~~ 127 (611)
|+|++.+ .||+| +...+||.+|+++|++|.+|=..
T Consensus 1 ~~i~v~g--------KGGvGKTT~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 1 MVLAVYG--------KGGIGKSTTSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred CEEEEec--------CCCCCHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6666653 35554 56688999999999999998543
No 390
>PRK07574 formate dehydrogenase; Provisional
Probab=20.09 E-value=2.8e+02 Score=29.80 Aligned_cols=44 Identities=20% Similarity=0.272 Sum_probs=32.6
Q ss_pred HHHHHHHccEEEeCC--CCCC---CcHHHHHHHHcCCceEEcCCccccc
Q 007247 470 AHMIIAGADFILIPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLVD 513 (611)
Q Consensus 470 ~~~i~~~aDv~l~pS--~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 513 (611)
+.++++.||++++.. ..|+ ++-..+..|.-|.-+|.+..|++.+
T Consensus 242 l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~iVD 290 (385)
T PRK07574 242 FDSLVSVCDVVTIHCPLHPETEHLFDADVLSRMKRGSYLVNTARGKIVD 290 (385)
T ss_pred HHHHhhcCCEEEEcCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCchhh
Confidence 457899999987643 3344 4446889999999899888887654
No 391
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=20.03 E-value=1.5e+02 Score=28.42 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=27.4
Q ss_pred CceEEEEeeeecCccccccHHHHhccchHHHHh-CCCeEEEEeec
Q 007247 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (611)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~ 127 (611)
.||++.|++.- ..-|-..+..+||.+|++ .|++|.+|=..
T Consensus 34 ~~~vi~v~s~k----gG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSSL----PGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECCC----CCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 46666565421 123566677889999997 69999999544
No 392
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=20.01 E-value=1.9e+02 Score=31.27 Aligned_cols=42 Identities=24% Similarity=0.340 Sum_probs=28.9
Q ss_pred CCCceEEEEeeeecCccccccHHHHhccchHHHHhCCCeEEEEeecCCcccc
Q 007247 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKD 133 (611)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~ 133 (611)
.+.++|+.++. +|++|+.+ .+.|.++|+.|..+.+.+.+..+
T Consensus 77 ~~~~~VlVvGa-------tG~vG~~i---v~~llkrgf~vra~VRd~~~a~~ 118 (411)
T KOG1203|consen 77 KKPTTVLVVGA-------TGKVGRRI---VKILLKRGFSVRALVRDEQKAED 118 (411)
T ss_pred CCCCeEEEecC-------CCchhHHH---HHHHHHCCCeeeeeccChhhhhh
Confidence 34455665554 47777654 56689999999999988655444
Done!