BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007254
(611 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
Query: 403 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK 462
E + + F+ ++L A+ NF +N++G+GG +VYKG L DG +AVK LK
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 463 E--FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
E F E+E+I+ H+N++ L GFC LLVY +++ GS+ L + W
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R ++A+G A L YLH ++IHRDVK++NILL ++FE + DFGLAK H
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 581 ITCTDVAGTFGYV 593
+ V GT G++
Sbjct: 199 VXXA-VRGTIGHI 210
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 3/193 (1%)
Query: 403 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK 462
E + + F+ ++L A+ NF +N++G+GG +VYKG L DG +AVK LK
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 463 E--FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
E F E+E+I+ H+N++ L GFC LLVY +++ GS+ L + W
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R ++A+G A L YLH ++IHRDVK++NILL ++FE + DFGLAK H
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 581 ITCTDVAGTFGYV 593
+ V G G++
Sbjct: 191 VXXA-VRGXIGHI 202
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 111/179 (62%), Gaps = 4/179 (2%)
Query: 416 DLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTL 474
DL AT+NF + LIG G +VYKG L DG ++A+K P S I+EF EIE ++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H +++SL+GFC E N ++L+Y ++ G+L+ +L+G+ + W +R ++ +G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH+ + +IHRDVKS NILL ++F P+++DFG++K + V GT GY+
Sbjct: 153 HYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 111/179 (62%), Gaps = 4/179 (2%)
Query: 416 DLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTL 474
DL AT+NF + LIG G +VYKG L DG ++A+K P S I+EF EIE ++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H +++SL+GFC E N ++L+Y ++ G+L+ +L+G+ + W +R ++ +G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH+ + +IHRDVKS NILL ++F P+++DFG++K + V GT GY+
Sbjct: 153 HYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 14/192 (7%)
Query: 412 FNYQDLLSATSNF------LAENLIGKGGSSQVYKGCLPDG----KELAVKILKPSEDVI 461
F++ +L + T+NF + N +G+GG VYKG + + K+LA + +E++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 462 KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS 521
++F EI+++ H+N++ LLGF + ++L LVY ++ GSL + L P W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP-LSWH 133
Query: 522 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
R K+A G A + +LH IHRD+KS+NILL + F ++SDFGLA+ + + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 582 TCTDVAGTFGYV 593
+ + GT Y+
Sbjct: 191 MXSRIVGTTAYM 202
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 14/192 (7%)
Query: 412 FNYQDLLSATSNF------LAENLIGKGGSSQVYKGCLPDG----KELAVKILKPSEDVI 461
F++ +L + T+NF + N +G+GG VYKG + + K+LA + +E++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 462 KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS 521
++F EI+++ H+N++ LLGF + ++L LVY ++ GSL + L P W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWH 127
Query: 522 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
R K+A G A + +LH IHRD+KS+NILL + F ++SDFGLA+ + + +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 582 TCTDVAGTFGYV 593
+ GT Y+
Sbjct: 185 MXXRIVGTTAYM 196
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 14/192 (7%)
Query: 412 FNYQDLLSATSNF------LAENLIGKGGSSQVYKGCLPDG----KELAVKILKPSEDVI 461
F++ +L + T+NF + N +G+GG VYKG + + K+LA + +E++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 462 KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS 521
++F EI+++ H+N++ LLGF + ++L LVY ++ GSL + L P W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWH 133
Query: 522 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
R K+A G A + +LH IHRD+KS+NILL + F ++SDFGLA+ + + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 582 TCTDVAGTFGYV 593
+ GT Y+
Sbjct: 191 MXXRIVGTTAYM 202
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 412 FNYQDLLSATSNF------LAENLIGKGGSSQVYKGCLPDG----KELAVKILKPSEDVI 461
F++ +L + T+NF + N G+GG VYKG + + K+LA + +E++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 462 KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS 521
++F EI++ H+N++ LLGF + ++L LVY + GSL + L P W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP-LSWH 124
Query: 522 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
R K+A G A + +LH IHRD+KS+NILL + F ++SDFGLA+ + + +
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 582 TCTDVAGTFGY 592
+ + GT Y
Sbjct: 182 XXSRIVGTTAY 192
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 90/182 (49%), Gaps = 27/182 (14%)
Query: 427 ENLIGKGGSSQVYKGCLPDGKELAVKILK--PSEDV---IKEFVLEIEIITTLHHKNIIS 481
E +IG GG +VY+ G E+AVK + P ED+ I+ E ++ L H NII+
Sbjct: 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF-GWSERYKVAMGVAEALEYLHSG 540
L G C ++ NL LV +F G L L G + P W A+ +A + YLH
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 541 SAQRVIHRDVKSSNILLSDDFEP--------QLSDFGLAK-WASTSSSHITCTDVAGTFG 591
+ +IHRD+KSSNIL+ E +++DFGLA+ W T T AG +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT-----TKMSAAGAYA 179
Query: 592 YV 593
++
Sbjct: 180 WM 181
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 446 GKELAVKILKPSE--DVIKEFVLEIEIITTLHHKNIISLLGFCFED--NNLLLVYDFLSR 501
G+++AVK LKP + I + EIEI+ L+H+NI+ G C ED N + L+ +FL
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
GSL+E L NK ++ K A+ + + ++YL GS Q V HRD+ + N+L+ +
Sbjct: 110 GSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVESEH 163
Query: 562 EPQLSDFGLAKWASTSSSHITCTD--VAGTFGYVVLILNPIAFLFMFNCWFF 611
+ ++ DFGL K T T D + F Y L F + W F
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 446 GKELAVKILKPSE--DVIKEFVLEIEIITTLHHKNIISLLGFCFED--NNLLLVYDFLSR 501
G+++AVK LKP + I + EIEI+ L+H+NI+ G C ED N + L+ +FL
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
GSL+E L NK ++ K A+ + + ++YL GS Q V HRD+ + N+L+ +
Sbjct: 98 GSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVESEH 151
Query: 562 EPQLSDFGLAKWASTSSSHITCTD--VAGTFGYVVLILNPIAFLFMFNCWFF 611
+ ++ DFGL K T T D + F Y L F + W F
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 203
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 12/165 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G V++ G ++AVKIL + + + EF+ E+ I+ L H NI+ +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMG--VAEALEYLHSGSAQR 544
+ NL +V ++LSRGSL LH K A ER +++M VA+ + YLH+ +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP- 159
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGT 589
++HRD+KS N+L+ + ++ DFGL++ +S + AGT
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGT 202
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G V++ G ++AVKIL + + + EF+ E+ I+ L H NI+ +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMG--VAEALEYLHSGSAQR 544
+ NL +V ++LSRGSL LH K A ER +++M VA+ + YLH+ +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP- 159
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGT 589
++HR++KS N+L+ + ++ DFGL++ +S+ ++ AGT
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGT 202
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 422 SNFLAENLIGKGGSSQVYKG-CLPDGKELAVKIL--------KPSEDVIKEFVLEIEIIT 472
+NF E IG+G S+VY+ CL DG +A+K + K D IKE I+++
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKE----IDLLK 87
Query: 473 TLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAE 532
L+H N+I EDN L +V + G L + KK +K + +
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 533 ALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSS 579
ALE++HS +RV+HRD+K +N+ ++ +L D GL ++ S+ ++
Sbjct: 148 ALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 425 LAENLIGKGGSSQVYKGCLPDGKEL-AVKILK-PSEDVIKEFVLEIEIITTLHHKNIISL 482
L E GK ++ Y C K L AVK LK S++ K+F E E++T L H++I+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD---------PAAFGWSERYKVAMGVAEA 533
G C E + L++V++++ G L + L + D P S+ +A +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL ++Q +HRD+ + N L+ ++ ++ DFG+++
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IGKG V G G ++AVK +K ++ + F+ E ++T L H N++ LLG E+
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 490 NN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHR 548
L +V +++++GSL + L + + G K ++ V EA+EYL + +HR
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 549 DVKSSNILLSDDFEPQLSDFGLAKWASTSS 578
D+ + N+L+S+D ++SDFGL K AS++
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IGKG V G G ++AVK +K ++ + F+ E ++T L H N++ LLG E+
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 490 NN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHR 548
L +V +++++GSL + L + + G K ++ V EA+EYL + +HR
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 549 DVKSSNILLSDDFEPQLSDFGLAKWASTSS 578
D+ + N+L+S+D ++SDFGL K AS++
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ 162
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IGKG V G G ++AVK +K ++ + F+ E ++T L H N++ LLG E+
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 490 NN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHR 548
L +V +++++GSL + L + + G K ++ V EA+EYL + +HR
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 549 DVKSSNILLSDDFEPQLSDFGLAKWASTSS 578
D+ + N+L+S+D ++SDFGL K AS++
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
S + IG G VYKG ++AVKILK P+ + + F E+ ++ H N
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
I+ +G+ +DN L +V + SL ++LH + F + +A A+ ++YLH
Sbjct: 94 ILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLH 149
Query: 539 SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA----KWASTSS 578
A+ +IHRD+KS+NI L + ++ DFGLA +W+ +
Sbjct: 150 ---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IGKG V G G ++AVK +K ++ + F+ E ++T L H N++ LLG E+
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 490 NN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHR 548
L +V +++++GSL + L + + G K ++ V EA+EYL + +HR
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 549 DVKSSNILLSDDFEPQLSDFGLAKWASTSS 578
D+ + N+L+S+D ++SDFGL K AS++
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 406 SATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAV--KILKPSEDVIKE 463
S R+F DL+ ++GKG Q K + E+ V ++++ E+ +
Sbjct: 1 SMPHRIFRPSDLIHG-------EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT 53
Query: 464 FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
F+ E++++ L H N++ +G ++D L + +++ G+L + K + + WS+R
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQR 110
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A +A + YLHS +IHRD+ S N L+ ++ ++DFGLA+
Sbjct: 111 VSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLAR 156
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + F ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 179 RNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 170
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 171 RNVLVTEDNVMKIADFGLAR 190
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 179 RNVLVTEDNVMKIADFGLAR 198
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 171
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 172 RNVLVTEDNVMKIADFGLAR 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 167
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 168 RNVLVTEDNVMKIADFGLAR 187
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 220 RNVLVTEDNVMKIADFGLAR 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 179 RNVLVTEDNVMKIADFGLAR 198
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 163
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 164 RNVLVTEDNVMKIADFGLAR 183
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 448 ELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK +E + + + E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 505 EENLHGNKKDPAAFGWSERYK------------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
E L + + ++ + A VA +EYL ++++ IHRD+ +
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 553 SNILLSDDFEPQLSDFGLAK 572
N+L+++D +++DFGLA+
Sbjct: 179 RNVLVTEDNVMKIADFGLAR 198
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 16/152 (10%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISL 482
+GKG V + C D G+ +AVK L+ S E+ +++F EIEI+ +L H NI+
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 483 LGFCFE--DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
G C+ NL L+ +FL GSL E L +K+ + + + + +EYL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE---RIDHIKLLQYTSQICKGMEYL--- 133
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+R IHRD+ + NIL+ ++ ++ DFGL K
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTK 165
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKI--LKPSEDVIKEFVLEIEIITTLHHKNI 479
++ + +IG G ++ V C P +++A+K L+ + + E + EI+ ++ HH NI
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 480 ISLLGFCFEDNNLLLVYDFLSRGSLEENL-HGNKKDPAAFGWSERYKVAM---GVAEALE 535
+S + L LV LS GS+ + + H K G + +A V E LE
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTF 590
YLH IHRDVK+ NILL +D Q++DFG++ + +T IT V TF
Sbjct: 131 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD-ITRNKVRKTF 181
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKI--LKPSEDVIKEFVLEIEIITTLHHKNI 479
++ + +IG G ++ V C P +++A+K L+ + + E + EI+ ++ HH NI
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 480 ISLLGFCFEDNNLLLVYDFLSRGSLEENL-HGNKKDPAAFGWSERYKVAM---GVAEALE 535
+S + L LV LS GS+ + + H K G + +A V E LE
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTF 590
YLH IHRDVK+ NILL +D Q++DFG++ + +T IT V TF
Sbjct: 136 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD-ITRNKVRKTF 186
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 80/147 (54%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G + ++AVK LKP ++ F+ E ++ TL H ++ L ++
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKD----PAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ ++ +F+++GSL + L ++ P +S + +AE + Y+ +
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ------IAEGMAYIER---KNY 130
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
IHRD++++N+L+S+ +++DFGLA+
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLAR 157
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 430 IGKGGSSQVY----KGCLPDGKEL--AVKILK-PSEDVIKEFVLEIEIITTLHHKNIISL 482
+G+G +V+ LP+ ++ AVK LK SE ++F E E++T L H++I+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD-----------PAAFGWSERYKVAMGVA 531
G C E LL+V++++ G L L + D P G + VA VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL + +HRD+ + N L+ ++ DFG+++
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 22/151 (14%)
Query: 430 IGKGGSSQVYK------GCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLL 483
+G G +VYK G L K + K SE+ ++++++EIEI+ T H I+ LL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 484 GFCFEDNNLLLVYDFLSRGSLEE---NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
G + D L ++ +F G+++ L +P + V + EAL +LHS
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP------QIQVVCRQMLEALNFLHS- 127
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+R+IHRD+K+ N+L++ + + +L+DFG++
Sbjct: 128 --KRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 22/151 (14%)
Query: 430 IGKGGSSQVYK------GCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLL 483
+G G +VYK G L K + K SE+ ++++++EIEI+ T H I+ LL
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 484 GFCFEDNNLLLVYDFLSRGSLEE---NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
G + D L ++ +F G+++ L +P + V + EAL +LHS
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP------QIQVVCRQMLEALNFLHS- 135
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+R+IHRD+K+ N+L++ + + +L+DFG++
Sbjct: 136 --KRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 168
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 149
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 232
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 233 NVLVTENNVMKIADFGLAR 251
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 169
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E+ + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 142
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 430 IGKGGSSQVY----KGCLPDGKEL--AVKILK-PSEDVIKEFVLEIEIITTLHHKNIISL 482
+G+G +V+ LP+ ++ AVK LK SE ++F E E++T L H++I+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD-----------PAAFGWSERYKVAMGVA 531
G C E LL+V++++ G L L + D P G + VA VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL + +HRD+ + N L+ ++ DFG+++
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 150
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 430 IGKGGSSQVY----KGCLPDGKEL--AVKILK-PSEDVIKEFVLEIEIITTLHHKNIISL 482
+G+G +V+ LP+ ++ AVK LK SE ++F E E++T L H++I+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD-----------PAAFGWSERYKVAMGVA 531
G C E LL+V++++ G L L + D P G + VA VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL + +HRD+ + N L+ ++ DFG+++
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 21/164 (12%)
Query: 427 ENLIGKGGSSQVYKGCLP-DGKEL--AVKILK--PSEDVIKEFVLEIEIITTL-HHKNII 480
+++IG+G QV K + DG + A+K +K S+D ++F E+E++ L HH NII
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK---KDPA---------AFGWSERYKVAM 528
+LLG C L L ++ G+L + L ++ DPA + A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
VA ++YL S ++ IHRD+ + NIL+ +++ +++DFGL++
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 149
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 21/164 (12%)
Query: 427 ENLIGKGGSSQVYKGCLP-DGKEL--AVKILK--PSEDVIKEFVLEIEIITTL-HHKNII 480
+++IG+G QV K + DG + A+K +K S+D ++F E+E++ L HH NII
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK---KDPA---------AFGWSERYKVAM 528
+LLG C L L ++ G+L + L ++ DPA + A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
VA ++YL S ++ IHRD+ + NIL+ +++ +++DFGL++
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 150
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 148
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IG G V+ G + ++A+K ++ ++F+ E E++ L H ++ L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ LV++F+ G L + L + F + + V E + YL S VIHRD
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAS---VIHRD 128
Query: 550 VKSSNILLSDDFEPQLSDFGLAKW 573
+ + N L+ ++ ++SDFG+ ++
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRF 152
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 147
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ ++YL +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKYL---A 145
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 427 ENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
E ++G+G V K K++A+K ++ SE K F++E+ ++ ++H NI+ L G C
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDP---AAFGWSERYKVAMGVAEALEYLHSGSAQ 543
N + LV ++ GSL LHG + P AA S + + GVA YLHS +
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA----YLHSMQPK 125
Query: 544 RVIHRDVKSSNILL-SDDFEPQLSDFGLA 571
+IHRD+K N+LL + ++ DFG A
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHKNIISLL 483
+GKGG ++ ++ D KE+ + P ++K + +EI I +L H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 484 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
GF FEDN+ + V + R SL E LH +K A E + +YLH
Sbjct: 88 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 140
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
RVIHRD+K N+ L++D E ++ DFGLA
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 178
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 179 NVLVTENNVMKIADFGLAR 197
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 175
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 176 NVLVTENNVMKIADFGLAR 194
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 506 ENLHG------------NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L N+ + + +A +EYL S Q+ IHRD+ +
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLTAR 173
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 174 NVLVTENNVMKIADFGLAR 192
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 117 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 171 VKIGDFGLTK 180
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 403 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK--ILKPSEDV 460
++Y R N +D +G G +VYK + LA I SE+
Sbjct: 24 KQYEHVTRDLNPEDFWEIIGE------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 461 IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
++++++EI+I+ + H NI+ LL + +NNL ++ +F + G+++ + ++
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER---PLTE 134
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
S+ V +AL YLH ++IHRD+K+ NIL + D + +L+DFG++
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 102 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 156 VKIGDFGLTK 165
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHKNIISLL 483
+GKGG ++ ++ D KE+ + P ++K + +EI I +L H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 484 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
GF FEDN+ + V + R SL E LH +K A E + +YLH
Sbjct: 84 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 136
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
RVIHRD+K N+ L++D E ++ DFGLA
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKG-CLPDGKELAVKILKPSEDVIKEFVLEIEIITTL-HHKNIISLLGFC 486
L+G G QVYKG + G+ A+K++ + D +E EI ++ HH+NI + G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 487 FE------DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
+ D+ L LV +F GS+ + + K + W +A E L L
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAYICREILRGLSHL 145
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+VIHRD+K N+LL+++ E +L DFG++
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 427 ENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
E ++G+G V K K++A+K ++ SE K F++E+ ++ ++H NI+ L G C
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDP---AAFGWSERYKVAMGVAEALEYLHSGSAQ 543
N + LV ++ GSL LHG + P AA S + + GVA YLHS +
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA----YLHSMQPK 124
Query: 544 RVIHRDVKSSNILL-SDDFEPQLSDFGLA 571
+IHRD+K N+LL + ++ DFG A
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 99 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 153 VKIGDFGLTK 162
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 117 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 171 VKIGDFGLTK 180
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 97 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 150
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 151 VKIGDFGLTK 160
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 99 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 153 VKIGDFGLTK 162
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHKNIISLL 483
+GKGG ++ ++ D KE+ + P ++K + +EI I +L H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 484 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
GF FEDN+ + V + R SL E LH +K A E + +YLH
Sbjct: 84 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 136
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
RVIHRD+K N+ L++D E ++ DFGLA
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 403 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK--ILKPSEDV 460
++Y R N +D +G G +VYK + LA I SE+
Sbjct: 24 KQYEHVTRDLNPEDFWEIIGE------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 461 IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
++++++EI+I+ + H NI+ LL + +NNL ++ +F + G+++ + ++
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER---PLTE 134
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
S+ V +AL YLH ++IHRD+K+ NIL + D + +L+DFG++
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 105 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 158
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 159 VKIGDFGLTK 168
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 506 ENLHG------------NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L N+ + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 104 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 157
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 158 VKIGDFGLTK 167
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHKNIISLL 483
+GKGG ++ ++ D KE+ + P ++K + +EI I +L H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 484 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
GF FEDN+ + V + R SL E LH +K A E + +YLH
Sbjct: 106 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHRN-- 158
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
RVIHRD+K N+ L++D E ++ DFGLA
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 98 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 151
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 152 VKIGDFGLTK 161
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMRIADFGLAR 205
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 403 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK--ILKPSEDV 460
++Y R N +D +G G +VYK + LA I SE+
Sbjct: 24 KQYEHVTRDLNPEDFWEIIGE------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 461 IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
++++++EI+I+ + H NI+ LL + +NNL ++ +F + G+++ + ++
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER---PLTE 134
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
S+ V +AL YLH ++IHRD+K+ NIL + D + +L+DFG++
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKE--LAVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V +G L P KE +A+K LK +E +EF+ E I+ H NII
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G ++++ +F+ G+L+ L N F + + G+A + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEM 135
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAG 588
S +HRD+ + NIL++ + ++SDFGL+++ +SS T T G
Sbjct: 136 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHKNIISLL 483
+GKGG ++ ++ D KE+ + P ++K + +EI I +L H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 484 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
GF FEDN+ + V + R SL E LH +K A E + +YLH
Sbjct: 108 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYLRQIVLGCQYLHR--- 159
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
RVIHRD+K N+ L++D E ++ DFGLA
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 130 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 183
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 184 VKIGDFGLTK 193
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 106 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 159
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 160 VKIGDFGLTK 169
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 506 ENLHG------------NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L N+ + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHKNIISLL 483
+GKGG ++ ++ D KE+ + P ++K + +EI I +L H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 484 GFCFEDNNLLLV-YDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHS 539
GF FEDN+ + V + R SL E LH +K +P A RY + + +YLH
Sbjct: 82 GF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA-----RYYLRQ-IVLGCQYLHR 133
Query: 540 GSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
RVIHRD+K N+ L++D E ++ DFGLA
Sbjct: 134 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 103 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 156
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 157 VKIGDFGLTK 166
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH ++ F + +A A ++YLH A+ +I
Sbjct: 90 TKPQ-LAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 99 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 153 VKIGDFGLTK 162
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G + ++AVK LKP ++ F+ E ++ TL H ++ L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ ++ +++++GSL + L ++ + + +AE + Y+ + IHRD
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER---KNYIHRD 135
Query: 550 VKSSNILLSDDFEPQLSDFGLAK 572
++++N+L+S+ +++DFGLA+
Sbjct: 136 LRAANVLVSESLMCKIADFGLAR 158
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 503 SLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDD 560
SL + L H + D + + + +EYL +R IHRD+ + NIL+ ++
Sbjct: 102 SLRDYLQAHAERIDHIKL-----LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 561 FEPQLSDFGLAK 572
++ DFGL K
Sbjct: 154 NRVKIGDFGLTK 165
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH ++ F + +A A ++YLH A+ +I
Sbjct: 78 TKPQ-LAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 130
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKE--LAVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V +G L P KE +A+K LK +E +EF+ E I+ H NII
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G ++++ +F+ G+L+ L N F + + G+A + YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAG 588
S +HRD+ + NIL++ + ++SDFGL+++ +SS T T G
Sbjct: 138 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ +++L +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKFL---A 209
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ +++L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKFL---A 150
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ +++L +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKFL---A 155
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ +++L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKFL---A 150
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ +++L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKFL---A 148
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ +++L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKFL---A 151
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 77/139 (55%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII LLG C +D L ++ ++ S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL ++Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 429 LIGKGGSSQVYKGCL--PDGKEL--AVKILKPSEDV--IKEFVLEIEIITTLHHKNIISL 482
+IG+G VY G L DGK++ AVK L D+ + +F+ E I+ H N++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 483 LGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
LG C + + L+V ++ G L + +P + + VA+ +++L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV---KDLIGFGLQVAKGMKFL---A 151
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ +HRD+ + N +L + F +++DFGLA+
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHK 477
++ +GKGG ++ Y+ D KE+ + P ++K + EI I +L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+++ GF +D+ + +V + R SL E LH +K A RY + + + ++YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK--AVTEPEARYFMRQTI-QGVQYL 158
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
H+ RVIHRD+K N+ L+DD + ++ DFGLA D+ GT Y+
Sbjct: 159 HN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYI 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IG G V+ G + ++A+K +K +F+ E E++ L H ++ L G C E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ LV++F+ G L + L + F + + V E + YL VIHRD
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 550 VKSSNILLSDDFEPQLSDFGLAKWA 574
+ + N L+ ++ ++SDFG+ ++
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFV 173
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 402 HEKYSATCRLF-NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPD----GKELAVKILKP 456
HE++ A +L + D +NF+ IG+G + V C+ GK++AVK +
Sbjct: 27 HEQFRAALQLVVSPGDPREYLANFIK---IGEGSTGIV---CIATEKHTGKQVAVKKMDL 80
Query: 457 SEDVIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDP 515
+ +E + E+ I+ HH N++ + + L +V +FL G+L + + + +
Sbjct: 81 RKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 140
Query: 516 AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAS 575
V + V AL YLH+ Q VIHRD+KS +ILL+ D +LSDFG S
Sbjct: 141 EQIA-----TVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 192
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHK 477
++ +GKGG ++ Y+ D KE+ + P ++K + EI I +L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+++ GF +D+ + +V + R SL E LH +K A RY + + + ++YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK--AVTEPEARYFMRQTI-QGVQYL 158
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H+ RVIHRD+K N+ L+DD + ++ DFGLA
Sbjct: 159 HN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 21/164 (12%)
Query: 427 ENLIGKGGSSQVYKGCLP-DGKEL--AVKILK--PSEDVIKEFVLEIEIITTL-HHKNII 480
+++IG+G QV K + DG + A+K +K S+D ++F E+E++ L HH NII
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK---KDPA---------AFGWSERYKVAM 528
+LLG C L L ++ G+L + L ++ DPA + A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
VA ++YL S ++ IHR++ + NIL+ +++ +++DFGL++
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
L +V + SL +LH ++ F + +A A ++YLH A+ +I
Sbjct: 90 TAPQ-LAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHK 477
++ +GKGG ++ Y+ D KE+ + P ++K + EI I +L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+++ GF +D+ + +V + R SL E LH +K A RY + + + ++YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK--AVTEPEARYFMRQTI-QGVQYL 158
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H+ RVIHRD+K N+ L+DD + ++ DFGLA
Sbjct: 159 HN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ + S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-----EFVLEIEIITTLHHK 477
++ +GKGG ++ Y+ D KE+ + P ++K + EI I +L +
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+++ GF +D+ + +V + R SL E LH +K A RY + + + ++YL
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRK--AVTEPEARYFMRQTI-QGVQYL 142
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
H+ RVIHRD+K N+ L+DD + ++ DFGLA D+ GT Y+
Sbjct: 143 HN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYI 193
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V G L P +E+ A+K LK +E ++F+ E I+ H N+I
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G + ++++ +F+ GSL+ L N F + + G+A ++YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYL--- 151
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAG 588
+ +HRD+ + NIL++ + ++SDFGL+++ +S T T G
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IG G V+ G + ++A+K ++ ++F+ E E++ L H ++ L G C E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ LV++F+ G L + L + F + + V E + YL VIHRD
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 550 VKSSNILLSDDFEPQLSDFGLAKWA 574
+ + N L+ ++ ++SDFG+ ++
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFV 151
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IG G V+ G + ++A+K ++ ++F+ E E++ L H ++ L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ LV++F+ G L + L + F + + V E + YL VIHRD
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 550 VKSSNILLSDDFEPQLSDFGLAKW 573
+ + N L+ ++ ++SDFG+ ++
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRF 152
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 449 LAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
+AVK+LK +E + + V E+E++ + HKNII+LLG C +D L ++ + S+G+L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 506 ENLHGNKKDPAAFGW------------SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
E L + + + + +A +EYL S Q+ IHRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+L++++ +++DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IG G V+ G + ++A+K ++ ++F+ E E++ L H ++ L G C E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ LV++F+ G L + L + F + + V E + YL VIHRD
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 550 VKSSNILLSDDFEPQLSDFGLAK 572
+ + N L+ ++ ++SDFG+ +
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTR 154
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 95
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L FCF+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 96 HPFFVKLY-FCFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 151
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 152 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ +A +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 120
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ RG + + L K F +A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANAL 126
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 178
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ +A +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 120
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ +A +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 125
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 425 LAENLIGKGGSSQVYKGCLPDGKEL-AVKILK-PSEDVIKEFVLEIEIITTLHHKNIISL 482
L E GK ++ Y K L AVK LK P+ K+F E E++T L H++I+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDP------------AAFGWSERYKVAMGV 530
G C + + L++V++++ G L + L + D G S+ +A +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A + YL ++Q +HRD+ + N L+ + ++ DFG+++
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ +A +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 120
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRG 502
G+ +AVK L+ S E+ +++F EIEI+ +L H NI+ G C+ NL L+ ++L G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
SL + L +K+ + + + + +EYL +R IHR++ + NIL+ ++
Sbjct: 100 SLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENR 153
Query: 563 PQLSDFGLAK 572
++ DFGL K
Sbjct: 154 VKIGDFGLTK 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V +++ GSL+ L +K A F + + G+A ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGLA+
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLAR 195
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 102 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ +A +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 120
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 101 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 153
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 102 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 94 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 146
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 79 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S TD+ GT Y+
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYL 173
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S TD+ GT Y+
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYL 178
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S TD+ GT Y+
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYL 173
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S TD+ GT Y+
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYL 174
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 79 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 76 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 128
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 74 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY 524
EI+I+ TL+H++II G C + + +L LV +++ GSL + L + + G ++
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-----SIGLAQLL 120
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT 584
A + E + YLH AQ IHR++ + N+LL +D ++ DFGLAK +
Sbjct: 121 LFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 585 DVAGT--FGYVVLILNPIAFLFMFNCWFF 611
+ + F Y L F + + W F
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSF 206
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
+ L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 74 TKPQ-LAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 125
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V +++ GSL+ L +K A F + + G+A ++
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 149
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 150 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 183
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 125
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 125
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY 524
EI+I+ TL+H++II G C + + +L LV +++ GSL + L + + G ++
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-----SIGLAQLL 120
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT 584
A + E + YLHS Q IHR++ + N+LL +D ++ DFGLAK +
Sbjct: 121 LFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 585 DVAGT--FGYVVLILNPIAFLFMFNCWFF 611
+ + F Y L F + + W F
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSF 206
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 121
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 122 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 125
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 126 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 402 HEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP- 456
H T + + L AT N + ++G G +V G LP KE+ A+K LK
Sbjct: 26 HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 457 -SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDP 515
+E ++F+ E I+ H NII L G + +++V +++ GSL+ L +K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHD 141
Query: 516 AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A F + + G+A ++YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 402 HEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP- 456
H T + + L AT N + ++G G +V G LP KE+ A+K LK
Sbjct: 26 HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 457 -SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDP 515
+E ++F+ E I+ H NII L G + +++V +++ GSL+ L +K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHD 141
Query: 516 AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A F + + G+A ++YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLHHKNIISLLGFCF 487
IG+G S VY + G+E+A++ + + KE ++ EI ++ + NI++ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 488 EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ L +V ++L+ GSL + + D V +ALE+LHS +VIH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 548 RDVKSSNILLSDDFEPQLSDFGL 570
RD+KS NILL D +L+DFG
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGF 162
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 120
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V +++ GSL+ L +K A F + + G+A ++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 132
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 133 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 121
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 122 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 429 LIGK-GGSSQVYKGCLPDGKELAVK--ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
+IG+ G +VYK + LA I SE+ ++++++EI+I+ + H NI+ LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 486 CFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +NNL ++ +F + G+++ + ++ S+ V +AL YLH ++
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KI 129
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLA 571
IHRD+K+ NIL + D + +L+DFG++
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 124
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 125 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 163
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 402 HEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP- 456
H T + + L AT N + ++G G +V G LP KE+ A+K LK
Sbjct: 24 HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 457 -SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDP 515
+E ++F+ E I+ H NII L G + +++V +++ GSL+ L +K
Sbjct: 83 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHD 139
Query: 516 AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A F + + G+A ++YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 140 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 193
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 120
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLHHKNIISLLGFCF 487
IG+G S VY + G+E+A++ + + KE ++ EI ++ + NI++ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 488 EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ L +V ++L+ GSL + + D V +ALE+LHS +VIH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 548 RDVKSSNILLSDDFEPQLSDFGL 570
RD+KS NILL D +L+DFG
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 446 GKELAVKILKPSEDVIKE--FVLEIEIITTLHHKNIISLLGFCFEDN---NLLLVYDFLS 500
G+ +AVK LK + EI+I+ TL+H++II G C ED +L LV +++
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCC-EDAGAASLQLVMEYVP 118
Query: 501 RGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDD 560
GSL + L + + G ++ A + E + YLH AQ IHRD+ + N+LL +D
Sbjct: 119 LGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDND 170
Query: 561 FEPQLSDFGLAKWASTSSSHITCTDVAGT--FGYVVLILNPIAFLFMFNCWFF 611
++ DFGLAK + + F Y L F + + W F
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 122
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 122
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V +++ GSL+ L +K A F + + G+A ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 162 YL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 430 IGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFE 488
+G G +VY+G +AVK LK ++EF+ E ++ + H N++ LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 489 DNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +F++ G+L + L N+++ +A +A ++ A+EYL + IH
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLEK---KNFIH 132
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD+ + N L+ ++ +++DFGL++
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSR 157
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 122
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLHHKNIISLLGFCF 487
IG+G S VY + G+E+A++ + + KE ++ EI ++ + NI++ L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 488 EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ L +V ++L+ GSL + + D V +ALE+LHS +VIH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 140
Query: 548 RDVKSSNILLSDDFEPQLSDFGL 570
RD+KS NILL D +L+DFG
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGF 163
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLHHKNIISLLGFCF 487
IG+G S VY + G+E+A++ + + KE ++ EI ++ + NI++ L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 488 EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ L +V ++L+ GSL + + D V +ALE+LHS +VIH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 548 RDVKSSNILLSDDFEPQLSDFGL 570
RD+KS NILL D +L+DFG
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGF 162
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG G VYKG ++AVK+L P+ ++ F E+ ++ H NI+ +G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
L +V + SL +LH + F + +A A+ ++YLH A+ +I
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 547 HRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
HRD+KS+NI L +D ++ DFGLA S S ++G+ ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V +++ GSL+ L +K A F + + G+A ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V +++ GSL+ L +K A F + + G+A ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 20/167 (11%)
Query: 427 ENLIGKGGSSQVYKGCL-PDGKELAVK--ILKPSE------DVIKEFVLEIEIITTLHHK 477
E IGKGG V+KG L D +A+K IL SE + +EF E+ I++ L+H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
NI+ L G N +V +F+ G L L +K P WS + ++ + +A +EY+
Sbjct: 84 NIVKLYGLM--HNPPRMVMEFVPCGDLYHRLL-DKAHPIK--WSVKLRLMLDIALGIEYM 138
Query: 538 HSGSAQRVIHRDVKSSNILLS--DDFEP---QLSDFGLAKWASTSSS 579
+ + ++HRD++S NI L D+ P +++DFGL++ + S S
Sbjct: 139 QNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS 184
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 270
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ +A +A +
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQI 327
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHR++ + N L+ ++ +++DFGL++
Sbjct: 328 SSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSR 366
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQI 133
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHRD+ + N L+ ++ +++DFGL++
Sbjct: 134 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 172
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V +++ GSL+ L +K A F + + G+A ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGL +
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGR 195
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
IG G V+ G + ++A+K ++ ++F+ E E++ L H ++ L G C E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ LV +F+ G L + L + F + + V E + YL VIHRD
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 550 VKSSNILLSDDFEPQLSDFGLAK 572
+ + N L+ ++ ++SDFG+ +
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTR 152
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 430 IGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFE 488
+G G +VY+G +AVK LK ++EF+ E ++ + H N++ LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 489 DNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +F++ G+L + L N+++ +A +A ++ A+EYL + IH
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLEK---KNFIH 132
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD+ + N L+ ++ +++DFGL++
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 430 IGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFE 488
+G G +VY+G +AVK LK ++EF+ E ++ + H N++ LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 489 DNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +F++ G+L + L N+++ +A +A ++ A+EYL + IH
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAMEYLEK---KNFIH 132
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD+ + N L+ ++ +++DFGL++
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSR 157
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKE-LAVKILKPS----EDVIKEFVLEIEIITTLHHKNIISLLG 484
+GKG VY K +A+K+L S E V + EIEI + L H NI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 485 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
+ + + L+ +F RG L + L HG + + + E +A+AL Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE------LADALHYCHE--- 132
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++VIHRD+K N+L+ E +++DFG + A + C GT Y+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYL 179
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKE-LAVKILKPS----EDVIKEFVLEIEIITTLHHKNIISLLG 484
+GKG VY K +A+K+L S E V + EIEI + L H NI+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 485 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
+ + + L+ +F RG L + L HG + + + E +A+AL Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE------LADALHYCHE--- 132
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++VIHRD+K N+L+ E +++DFG + A + C GT Y+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYL 179
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 402 HEKYSATCRLF-NYQDLLSATSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSED 459
HE++ A +L + D S NF+ IG+G + V + GK +AVK + +
Sbjct: 133 HEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ 189
Query: 460 VIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE---NLHGNKKDP 515
+E + E+ I+ H+N++ + + L +V +FL G+L + + N++
Sbjct: 190 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 249
Query: 516 AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGL 570
AA V + V +AL LH AQ VIHRD+KS +ILL+ D +LSDFG
Sbjct: 250 AA--------VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGF 293
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKE-LAVKILKPS----EDVIKEFVLEIEIITTLHHKNIISLLG 484
+GKG VY K +A+K+L S E V + EIEI + L H NI+ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
+ + + L+ +F RG L + L HG + + + E +A+AL Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE------LADALHYCHE--- 133
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++VIHRD+K N+L+ E +++DFG + A + C GT Y+
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYL 180
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 402 HEKYSATCRLF-NYQDLLSATSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSED 459
HE++ A +L + D S NF+ IG+G + V + GK +AVK + +
Sbjct: 13 HEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ 69
Query: 460 VIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF 518
+E + E+ I+ H+N++ + + L +V +FL G+L + + + +
Sbjct: 70 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 129
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAS 575
V + V +AL LH AQ VIHRD+KS +ILL+ D +LSDFG S
Sbjct: 130 A-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 178
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ + IGKG ++V + G+E+AVKI+ ++ +++ E+ I+ L+H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQY 129
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 130 CHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 402 HEKYSATCRLF-NYQDLLSATSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSED 459
HE++ A +L + D S NF+ IG+G + V + GK +AVK + +
Sbjct: 11 HEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ 67
Query: 460 VIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF 518
+E + E+ I+ H+N++ + + L +V +FL G+L + + + +
Sbjct: 68 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 127
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAS 575
V + V +AL LH AQ VIHRD+KS +ILL+ D +LSDFG S
Sbjct: 128 A-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 176
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S T++ GT Y+
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYL 173
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 16/149 (10%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
+G+G VYK G+ +A+K ++ E + + EI ++ LHH NI+SL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 487 FEDNNLLLVYDFLSRG---SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
+ L LV++F+ + L+EN G + Y++ GVA ++
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI---YLYQLLRGVAHCHQH------- 138
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
R++HRD+K N+L++ D +L+DFGLA+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 20/180 (11%)
Query: 402 HEKYSATCRLF-NYQDLLSATSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSED 459
HE++ A +L + D S NF+ IG+G + V + GK +AVK + +
Sbjct: 56 HEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ 112
Query: 460 VIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE---NLHGNKKDP 515
+E + E+ I+ H+N++ + + L +V +FL G+L + + N++
Sbjct: 113 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 172
Query: 516 AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAS 575
AA V + V +AL LH AQ VIHRD+KS +ILL+ D +LSDFG S
Sbjct: 173 AA--------VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 16/149 (10%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
+G+G VYK G+ +A+K ++ E + + EI ++ LHH NI+SL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 487 FEDNNLLLVYDFLSRG---SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
+ L LV++F+ + L+EN G + Y++ GVA ++
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI---YLYQLLRGVAHCHQH------- 138
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
R++HRD+K N+L++ D +L+DFGLA+
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + G+E+A+KI+ ++ +++ E+ I+ L+H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L L+ ++ S G + + L HG K+ A R K + A++Y
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-----RSKFRQ-IVSAVQY 129
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H +R++HRD+K+ N+LL D +++DFG +
Sbjct: 130 CHQ---KRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 402 HEKYSATCRLF-NYQDLLSATSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSED 459
HE++ A +L + D S NF+ IG+G + V + GK +AVK + +
Sbjct: 2 HEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ 58
Query: 460 VIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF 518
+E + E+ I+ H+N++ + + L +V +FL G+L + + + +
Sbjct: 59 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 118
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAS 575
V + V +AL LH AQ VIHRD+KS +ILL+ D +LSDFG S
Sbjct: 119 A-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 402 HEKYSATCRLF-NYQDLLSATSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSED 459
HE++ A +L + D S NF+ IG+G + V + GK +AVK + +
Sbjct: 6 HEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ 62
Query: 460 VIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF 518
+E + E+ I+ H+N++ + + L +V +FL G+L + + + +
Sbjct: 63 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI 122
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAS 575
V + V +AL LH AQ VIHRD+KS +ILL+ D +LSDFG S
Sbjct: 123 A-----AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 171
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + G+E+A+KI+ ++ +++ E+ I+ L+H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L L+ ++ S G + + L HG K+ A R K + A++Y
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-----RSKFRQ-IVSAVQY 126
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H +R++HRD+K+ N+LL D +++DFG +
Sbjct: 127 CHQ---KRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ RG + + L K F +A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANAL 126
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S + GT Y+
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYL 178
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V G L P +E+ A+K LK +E ++F+ E I+ H N+I
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G + ++++ +F+ GSL+ L N F + + G+A ++YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYL--- 125
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAG 588
+ +HR + + NIL++ + ++SDFGL+++ +S T T G
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 31/183 (16%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKELAVKILKPS---------EDVIKEFVLEIEIITTLH 475
+++IG+G SS V + C+ G E AVKI++ + E+V + E I+ +
Sbjct: 99 KDVIGRGVSS-VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157
Query: 476 -HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H +II+L+ + + LV+D + +G L + L + A E + + EA+
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAV 213
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI----TCTDVAGTF 590
+LH A ++HRD+K NILL D+ + +LSDFG S H+ ++ GT
Sbjct: 214 SFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGF-------SCHLEPGEKLRELCGTP 263
Query: 591 GYV 593
GY+
Sbjct: 264 GYL 266
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 446 GKELAVKILKPS--EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSR 501
G+ +AVK LK + + EIEI+ TL+H++I+ G C + + ++ LV +++
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
GSL + L + G ++ A + E + YLH AQ IHR + + N+LL +D
Sbjct: 97 GSLRDYLPRH-----CVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDR 148
Query: 562 EPQLSDFGLAKWASTSSSHITCTDVAGT--FGYVVLILNPIAFLFMFNCWFF 611
++ DFGLAK + + + F Y L F + + W F
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 200
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 446 GKELAVKILKPS--EDVIKEFVLEIEIITTLHHKNIISLLGFCFE--DNNLLLVYDFLSR 501
G+ +AVK LK + + EIEI+ TL+H++I+ G C + + ++ LV +++
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
GSL + L + G ++ A + E + YLH AQ IHR + + N+LL +D
Sbjct: 98 GSLRDYLPRH-----CVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDR 149
Query: 562 EPQLSDFGLAKWASTSSSHITCTDVAGT--FGYVVLILNPIAFLFMFNCWFF 611
++ DFGLAK + + + F Y L F + + W F
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 201
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 199
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S D+ GT Y+
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLDYL 199
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V + + GSL+ L +K A F + + G+A ++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL A +HRD+ + NIL++ + ++SDFGL++
Sbjct: 162 YLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 267
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQI 324
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHR++ + N L+ ++ +++DFGL++
Sbjct: 325 SSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSR 363
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 88
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 89 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 144
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEII 471
NY ++ ++ +G G +VY+G +AVK LK ++EF+ E ++
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 309
Query: 472 TTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGV 530
+ H N++ LLG C + ++ +F++ G+L + L N+++ A +A +
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQI 366
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ A+EYL + IHR++ + N L+ ++ +++DFGL++
Sbjct: 367 SSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDYL 174
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYL 175
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYL 176
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 173
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 178
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL 482
FL E +G G V G ++A+K++K EF+ E +++ L H+ ++ L
Sbjct: 27 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
G C + + ++ ++++ G L L + F + ++ V EA+EYL S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES--- 138
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
++ +HRD+ + N L++D ++SDFGL+++
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 402 HEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP- 456
H T + + L AT N + ++G G +V G LP KE+ A+K LK
Sbjct: 26 HTYEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 457 -SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDP 515
+E ++F+ E I+ H NII L G + +++V + + GSL+ L +K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHD 141
Query: 516 AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A F + + G+A ++YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 427 ENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V G LP +EL A+K LK +E ++F+ E I+ H NII
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G + +++V +++ GSL+ L KK+ F + + G++ ++YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYL--- 140
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL 482
FL E +G G V G ++A+K++K EF+ E +++ L H+ ++ L
Sbjct: 27 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
G C + + ++ ++++ G L L + F + ++ V EA+EYL S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES--- 138
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
++ +HRD+ + N L++D ++SDFGL+++
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 138
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 139 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 190
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 176
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 422 SNFLAENLIGKGGSSQVYKG--CLPDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLH 475
+N + ++G G +V G LP KE+ A+K LK +E ++F+ E I+
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NII L G + +++V + + GSL+ L +K A F + + G+A ++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 132
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL S +HRD+ + NIL++ + ++SDFGL++
Sbjct: 133 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 430 IGKGGSSQVYKGCLPD-GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFE 488
+G+G VYK + G+ +A+K + P E ++E + EI I+ +++ G F+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 489 DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHR 548
+ +L +V ++ GS+ + + K E + + LEYLH R IHR
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNK---TLTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 549 DVKSSNILLSDDFEPQLSDFGLA 571
D+K+ NILL+ + +L+DFG+A
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVA 172
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 423 NFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLHH 476
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDH 92
Query: 477 KNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
+ L F F+D+ L Y LS E L +K + R+ A + ALEY
Sbjct: 93 PFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEY 148
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
LH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 149 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S D+ GT Y+
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLDYL 176
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 178
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 335 P-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 384
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLAR 411
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + GKE+AVKI+ ++ +++ E+ I+ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQY 128
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 129 CHQ---KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 120
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 121 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 172
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + GKE+AVKI+ ++ +++ E+ I+ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQY 128
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 129 CHQ---KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 125
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 126 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 177
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 423 NFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLHH 476
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDH 91
Query: 477 KNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
+ L F F+D+ L Y LS E L +K + R+ A + ALEY
Sbjct: 92 PFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVSALEY 147
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
LH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLHHKNIISLLGFCF 487
IG+G S VY + G+E+A++ + + KE ++ EI ++ + NI++ L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 488 EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ L +V ++L+ GSL + + D V +ALE+LHS +VIH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 140
Query: 548 RDVKSSNILLSDDFEPQLSDFGL 570
R++KS NILL D +L+DFG
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGF 163
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL 482
FL E +G G V G ++A+K++K EF+ E +++ L H+ ++ L
Sbjct: 7 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
G C + + ++ ++++ G L L + F + ++ V EA+EYL S
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES--- 118
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
++ +HRD+ + N L++D ++SDFGL+++
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 150
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 423 NFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLHH 476
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDH 94
Query: 477 KNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
+ L F F+D+ L Y LS E L +K + R+ A + ALEY
Sbjct: 95 PFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVSALEY 150
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
LH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 151 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL 482
FL E +G G V G ++A+K++K EF+ E +++ L H+ ++ L
Sbjct: 18 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
G C + + ++ ++++ G L L + F + ++ V EA+EYL S
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES--- 129
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
++ +HRD+ + N L++D ++SDFGL+++
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 161
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL 482
FL E +G G V G ++A+K++K EF+ E +++ L H+ ++ L
Sbjct: 12 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
G C + + ++ ++++ G L L + F + ++ V EA+EYL S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES--- 123
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
++ +HRD+ + N L++D ++SDFGL+++
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYL 176
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTLHHKNIISLLG 484
+GKG VY K LA+K+L ++ V + E+EI + L H NI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ + + L+ ++ G++ L + + F +A AL Y HS +R
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHS---KR 132
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
VIHRD+K N+LL + E +++DFG + A +S C GT Y+
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYL 177
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 90
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 91 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 146
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 428 NLIGKGGSSQVYKGC-LPDGK----ELAVKILK----PSEDVIKEFVLEIEIITTLHHKN 478
++G G VYKG +P+G+ +A+KIL P +V EF+ E I+ ++ H +
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPH 101
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
++ LLG C + LV + G L E +H +K + G + +A+ + YL
Sbjct: 102 LVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGMMYLE 157
Query: 539 SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+R++HRD+ + N+L+ +++DFGLA+
Sbjct: 158 E---RRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + GKE+AVKI+ ++ +++ E+ I+ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQY 128
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 129 CHQ---KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 68
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 69 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 124
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 125 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYL 173
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTLHHKNIISLLG 484
+GKG VY K LA+K+L ++ V + E+EI + L H NI+ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ + + L+ ++ G++ L + + F +A AL Y HS +R
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHS---KR 132
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
VIHRD+K N+LL + E +++DFG + A +S C GT Y+
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC----GTLDYL 177
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 90
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 91 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 146
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 252 P-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 301
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 91
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 92 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 147
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 148 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 67
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 68 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 123
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 124 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 88
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 89 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 144
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 423 NFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLHH 476
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDH 91
Query: 477 KNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
+ L F F+D+ L Y LS E L +K + R+ A + ALEY
Sbjct: 92 PFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVSALEY 147
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
LH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S T ++GT Y+
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGTLDYL 174
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 65
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 66 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 121
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 122 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL 482
FL E +G G V G ++A+K++K EF+ E +++ L H+ ++ L
Sbjct: 11 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
G C + + ++ ++++ G L L + F + ++ V EA+EYL S
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES--- 122
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
++ +HRD+ + N L++D ++SDFGL+++
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 154
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 25/181 (13%)
Query: 427 ENLIGKGGSSQVYKGCL-PDGKELAVK--ILKPSE------DVIKEFVLEIEIITTLHHK 477
E IGKGG V+KG L D +A+K IL SE + +EF E+ I++ L+H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
NI+ L G N +V +F+ G L L +K P WS + ++ + +A +EY+
Sbjct: 84 NIVKLYGLM--HNPPRMVMEFVPCGDLYHRLL-DKAHPIK--WSVKLRLMLDIALGIEYM 138
Query: 538 HSGSAQRVIHRDVKSSNILLS--DDFEP---QLSDFGLAKWASTSSSHITCTDVAGTFGY 592
+ + ++HRD++S NI L D+ P +++DFG S S H + + + G F +
Sbjct: 139 QNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVH-SVSGLLGNFQW 192
Query: 593 V 593
+
Sbjct: 193 M 193
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYL 173
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 252 P-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 301
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYL 173
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 176
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 90
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 91 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 146
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 66
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 67 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 122
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 123 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL 482
FL E +G G V G ++A+K++K EF+ E +++ L H+ ++ L
Sbjct: 12 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 483 LGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSA 542
G C + + ++ ++++ G L L + F + ++ V EA+EYL S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLES--- 123
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
++ +HRD+ + N L++D ++SDFGL+++
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 88
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 89 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 144
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 88
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 89 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 144
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 86 P-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 20/167 (11%)
Query: 427 ENLIGKGGSSQVYKGCL-PDGKELAVK--ILKPSE------DVIKEFVLEIEIITTLHHK 477
E IGKGG V+KG L D +A+K IL SE + +EF E+ I++ L+H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
NI+ L G N +V +F+ G L L +K P WS + ++ + +A +EY+
Sbjct: 84 NIVKLYGLM--HNPPRMVMEFVPCGDLYHRLL-DKAHPIK--WSVKLRLMLDIALGIEYM 138
Query: 538 HSGSAQRVIHRDVKSSNILLS--DDFEP---QLSDFGLAKWASTSSS 579
+ + ++HRD++S NI L D+ P +++DF L++ + S S
Sbjct: 139 QNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS 184
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY + K LA+K+L ++ V + E+EI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS ++VIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 122 SYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYL 173
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 76 P-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 125
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLAR 152
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++++GSL + L G + P S + M E + Y
Sbjct: 83 P-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY--------- 132
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 86 P-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 252 P-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 301
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 86 P-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 79 P-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 128
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLAR 155
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 72
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 73 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 128
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 129 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++++GSL + L G + P S + M E + Y
Sbjct: 83 P-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY--------- 132
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 75 P-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 124
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLAR 151
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 87
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 88 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 143
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 144 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 77 P-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 126
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLAR 153
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 118
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E +++DFG + A +S C GT Y+
Sbjct: 119 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYL 170
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 86 P-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + GKE+AV+I+ ++ +++ E+ I+ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQY 128
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 129 CHQ---KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 428 NLIGKGGSSQVYKGC-LPDGK----ELAVKILK----PSEDVIKEFVLEIEIITTLHHKN 478
++G G VYKG +P+G+ +A+KIL P +V EF+ E I+ ++ H +
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPH 78
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
++ LLG C + LV + G L E +H +K + G + +A+ + YL
Sbjct: 79 LVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCVQIAKGMMYLE 134
Query: 539 SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+R++HRD+ + N+L+ +++DFGLA+
Sbjct: 135 E---RRLVHRDLAARNVLVKSPNHVKITDFGLAR 165
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITT 473
L + NF IG+G VYK G+ +A+K ++ +E V + EI ++
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVA 531
L+H NI+ LL +N L LV++FLS L++ + + P S +++ G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 120 ----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 427 ENLIGKGGSSQVYKGCLP--DGKE---LAVKILKP--SEDVIKEFVLEIEIITTLHHKNI 479
+ +IG G +VYKG L GK+ +A+K LK +E +F+ E I+ H NI
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 480 ISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHS 539
I L G + ++++ +++ G+L++ L +KD F + + G+A ++YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLR--EKD-GEFSVLQLVGMLRGIAAGMKYL-- 163
Query: 540 GSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ +HRD+ + NIL++ + ++SDFGL++
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 422 SNFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLH 475
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 87
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H + L F F+D+ L Y LS E L +K + R+ A + ALE
Sbjct: 88 HPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 143
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 144 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITT 473
L + NF IG+G VYK G+ +A+K ++ +E V + EI ++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVA 531
L+H NI+ LL +N L LV++FLS L++ + + P S +++ G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 121 ----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + GKE+AV+I+ ++ +++ E+ I+ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQY 128
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 129 CHQ---KFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITT 473
L + NF IG+G VYK G+ +A+K ++ +E V + EI ++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVA 531
L+H NI+ LL +N L LV++FLS L++ + + P S +++ G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 121 ----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + GKE+AVKI+ ++ +++ E+ I+ L+H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA-----RAKFRQ-IVSAVQY 121
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 122 CHQ---KFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 253 -PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 302
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGL +
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGR 329
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ + H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 86 P-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E ++++FG + A +S C GT Y+
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYL 175
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 25/174 (14%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKIL--------KPSEDVIKEFVLEIEIITTLHHKNIIS 481
+G GG S VY L + L +K+ + E+ +K F E+ + L H+NI+S
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHS 539
++ ED+ LV +++ +L E + HG A ++ + + + +++ H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQ------ILDGIKHAHD 129
Query: 540 GSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTD-VAGTFGY 592
R++HRD+K NIL+ + ++ DFG+AK S +S +T T+ V GT Y
Sbjct: 130 ---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--LTQTNHVLGTVQY 178
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKE-LAVKILKPSE----DVIKEFVLEIEIITTL 474
A +F +GKG VY K LA+K+L ++ V + E+EI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L G+ + + L+ ++ G++ L K F +A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
Y HS +RVIHRD+K N+LL E ++++FG + A +S C GT Y+
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYL 176
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 423 NFLAENLIGKGGSSQV-YKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTLHHKN 478
N+ IGKG ++V + GKE+AVKI+ ++ +++ E+ I L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEY 536
I+ L + L LV ++ S G + + L HG K+ A R K + A++Y
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA-----RAKFRQ-IVSAVQY 128
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
H + ++HRD+K+ N+LL D +++DFG +
Sbjct: 129 CHQ---KFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+GSL + L G + P + + M E + Y
Sbjct: 86 -PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD+ ++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLAR 162
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHH 476
L S+F ++G+G QV K D + A+K ++ +E+ + + E+ ++ +L+H
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 477 KNIISLLGFCFEDNN-------------LLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
+ ++ E N L + ++ G+L + +H + E
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR---DEY 118
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ + EAL Y+HS Q +IHRD+K NI + + ++ DFGLAK
Sbjct: 119 WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+G L + L G + P + + M E + Y
Sbjct: 86 P-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 17/178 (9%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILKPSE----DVIKEFVLEIEIITTLHHK 477
+F NL+GKG + VY+ + G E+A+K++ +++ E++I L H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 478 NIISLLGFCFEDNNLL-LVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
+I+ L + FED+N + LV + G + L N+ P F +E + + Y
Sbjct: 72 SILELYNY-FEDSNYVYLVLEMCHNGEMNRYL-KNRVKP--FSENEARHFMHQIITGMLY 127
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA-KWASTSSSHITCTDVAGTFGYV 593
LHS ++HRD+ SN+LL+ + +++DFGLA + H T + GT Y+
Sbjct: 128 LHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNYI 179
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 31/171 (18%)
Query: 430 IGKGGSSQVYK----GCLP--DGKELAVKILK--PSEDVIKEFVLEIEIITTLHHKNIIS 481
IG+G +V++ G LP +AVK+LK S D+ +F E ++ + NI+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG--------------------NKKDPAAFGWS 521
LLG C + L++++++ G L E L + P +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 522 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
E+ +A VA + YL S ++ +HRD+ + N L+ ++ +++DFGL++
Sbjct: 175 EQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 29/157 (18%)
Query: 449 LAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
+AVK+LK PSE +++ + E ++ ++H ++I L G C +D LLL+ ++ GSL
Sbjct: 56 VAVKMLKENASPSE--LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 505 EENLHGNKK--------------------DPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
L ++K D A + A +++ ++YL + +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMK 170
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
++HRD+ + NIL+++ + ++SDFGL++ S++
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 412 FNYQDLLSATSNFLAE---------NLIGKGGSSQVYKGCL--PDGKEL--AVKILKP-- 456
F ++D A F E +IG G +V G L P +E+ A+K LK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 457 SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPA 516
++ ++F+ E I+ H NII L G + ++++ +++ GSL+ L +K+
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDG 126
Query: 517 AFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
F + + G+ ++YL SA +HRD+ + NIL++ + ++SDFG+++
Sbjct: 127 RFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSR 179
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITT 473
L + NF IG+G VYK G+ +A+K ++ +E V + EI ++
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVA 531
L+H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 122 ----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITT 473
L + NF IG+G VYK G+ +A+K ++ +E V + EI ++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVA 531
L+H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 121 ----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 427 ENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
E +G G +V+ ++AVK +KP ++ F+ E ++ TL H ++ L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 487 FEDNNLLLVYDFLSRGSLEENL---HGNKKD-PAAFGWSERYKVAMGVAEALEYLHSGSA 542
++ + ++ +F+++GSL + L G+K+ P +S + M E Y
Sbjct: 247 TKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY------ 299
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
IHRD++++NIL+S +++DFGLA+
Sbjct: 300 ---IHRDLRAANILVSASLVCKIADFGLAR 326
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 423 NFLAENLIGKGG-SSQVYKGCLPDGKELAVKILKPSEDVIKE-----FVLEIEIITTLHH 476
+F ++G+G S+ V L +E A+KIL+ +IKE E ++++ L H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDH 91
Query: 477 KNIISLLGFCFEDN-NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
+ L F F+D+ L + G L + + + +F + + ALE
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALE 146
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
YLH + +IHRD+K NILL++D Q++DFG AK S S GT YV
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 427 ENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
E +G G +V+ ++AVK +KP ++ F+ E ++ TL H ++ L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 487 FEDNNLLLVYDFLSRGSLEENL---HGNKKD-PAAFGWSERYKVAMGVAEALEYLHSGSA 542
++ + ++ +F+++GSL + L G+K+ P +S + M E Y
Sbjct: 253 TKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY------ 305
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
IHRD++++NIL+S +++DFGLA+
Sbjct: 306 ---IHRDLRAANILVSASLVCKIADFGLAR 332
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Query: 430 IGKGGSSQVYKGCLPDGKE----LAVKILKPS----EDVIKEFVLEIEIITTLHHKNIIS 481
+GKG VY L K+ +A+K+L S E V + EIEI LHH NI+
Sbjct: 31 LGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L + ++ + L+ ++ RG L + L + F + +A+AL Y H
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKELQKS----CTFDEQRTATIMEELADALMYCH--- 140
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++VIHRD+K N+LL E +++DFG + A + C GT Y+
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYL 188
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 416 DLLSATSNFLAENLIGKGGSSQVYKGCLPDGKEL-AVKILK-----PSEDVIKEFVL-EI 468
D+ S + + +G+G + VYK + ++ A+K +K ++D I L EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 469 EIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM 528
+++ L H NII LL +N+ LV+DF+ E +L KD + K M
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-----ETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 529 GVA-EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ + LEYLH ++HRD+K +N+LL ++ +L+DFGLAK
Sbjct: 119 LMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 430 IGKGGSSQVYKGCLPDGK-ELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFE 488
+G G +VY G +AVK LK ++EF+ E ++ + H N++ LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 489 DNNLLLVYDFLSRGSLEENLHG-NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ +V +++ G+L + L N+++ A +A ++ A+EYL + IH
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYLEK---KNFIH 153
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD+ + N L+ ++ +++DFGL++
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSR 178
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G+G +V+ G +A+K LKP + F+ E +++ L H+ ++ L E+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNK----KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+ +V +++S+G L + L G + P + + M E + Y
Sbjct: 86 P-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY--------- 135
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAK 572
+HRD++++NIL+ ++ +++DFGLA+
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 22/176 (12%)
Query: 402 HEKYSATCRLFNYQDLLSATSNFLAENL--IGKGGSSQVYKGCLP----DGKELAVKILK 455
HE++ A R+ Q L ++ IG+G + V CL G+++AVK++
Sbjct: 27 HEQFKAALRMVVDQ----GDPRLLLDSYVKIGEGSTGIV---CLAREKHSGRQVAVKMMD 79
Query: 456 PSEDVIKEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD 514
+ +E + E+ I+ H N++ + L ++ +FL G+L + + + +
Sbjct: 80 LRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLN 139
Query: 515 PAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGL 570
V V +AL YLH AQ VIHRD+KS +ILL+ D +LSDFG
Sbjct: 140 EEQIA-----TVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGF 187
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 449 LAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
+AVK+LK PSE +++ + E ++ ++H ++I L G C +D LLL+ ++ GSL
Sbjct: 56 VAVKMLKENASPSE--LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 505 EENLHGNKK--------------------DPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
L ++K D A + A +++ ++YL + +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMK 170
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++HRD+ + NIL+++ + ++SDFGL++
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 427 ENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
E +G G +V+ ++AVK +KP ++ F+ E ++ TL H ++ L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 487 FEDNNLLLVYDFLSRGSLEENL---HGNKKD-PAAFGWSERYKVAMGVAEALEYLHSGSA 542
++ + ++ +F+++GSL + L G+K+ P +S + M E Y
Sbjct: 80 TKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY------ 132
Query: 543 QRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
IHRD++++NIL+S +++DFGLA+
Sbjct: 133 ---IHRDLRAANILVSASLVCKIADFGLAR 159
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FLS L++ + + P S +++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 118
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 --FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 423 NFLAENLIGKGGSSQVYKGCL--PDGKELAVKILK-------PSEDV--IKEFVL-EIEI 470
N+ + ++G+G SS V + C+ P KE AVKI+ +E+V ++E L E++I
Sbjct: 18 NYEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 471 ITTLH-HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMG 529
+ + H NII L + LV+D + +G L + L + E K+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRA 132
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ E + LH + ++HRD+K NILL DD +L+DFG +
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 422 SNFLAENLIGKGGSSQVYKGCL--PDGKELAVKILK-------PSEDV--IKEFVL-EIE 469
N+ + ++G+G SS V + C+ P KE AVKI+ +E+V ++E L E++
Sbjct: 17 ENYEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 470 IITTLH-HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM 528
I+ + H NII L + LV+D + +G L + L + E K+
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMR 131
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ E + LH + ++HRD+K NILL DD +L+DFG +
Sbjct: 132 ALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 422 SNFLAENLIGKGGSSQVYKGCL--PDGKELAVKILK-------PSEDV--IKEFVL-EIE 469
N+ + ++G+G SS V + C+ P KE AVKI+ +E+V ++E L E++
Sbjct: 4 ENYEPKEILGRGVSS-VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 470 IITTLH-HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM 528
I+ + H NII L + LV+D + +G L + L + E K+
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMR 118
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ E + LH + ++HRD+K NILL DD +L+DFG +
Sbjct: 119 ALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
IGKG +V++G G+E+AVKI E+ + + E EI T L H+NI LGF
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENI---LGFIA 90
Query: 488 EDN-------NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
DN L LV D+ GSL + L N+ G K+A+ A L +LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHME 145
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ + HRD+KS NIL+ + ++D GLA
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
IGKG +V++G G+E+AVKI E+ + + E EI T L H+NI LGF
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENI---LGFIA 65
Query: 488 EDN-------NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
DN L LV D+ GSL + L N+ G K+A+ A L +LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHME 120
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ + HRD+KS NIL+ + ++D GLA
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
IGKG +V++G G+E+AVKI E+ + + E EI T L H+NI LGF
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENI---LGFIA 70
Query: 488 EDN-------NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
DN L LV D+ GSL + L N+ G K+A+ A L +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHME 125
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ + HRD+KS NIL+ + ++D GLA
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
IGKG +V++G G+E+AVKI E+ + + E EI T L H+NI LGF
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENI---LGFIA 67
Query: 488 EDN-------NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
DN L LV D+ GSL + L N+ G K+A+ A L +LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHME 122
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ + HRD+KS NIL+ + ++D GLA
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
IGKG +V++G G+E+AVKI E+ + + E EI T L H+NI LGF
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENI---LGFIA 64
Query: 488 EDN-------NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
DN L LV D+ GSL + L N+ G K+A+ A L +LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHME 119
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ + HRD+KS NIL+ + ++D GLA
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
IGKG +V++G G+E+AVKI E+ + + E EI T L H+NI LGF
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENI---LGFIA 103
Query: 488 EDN-------NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
DN L LV D+ GSL + L N+ G K+A+ A L +LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEG---MIKLALSTASGLAHLHME 158
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ + HRD+KS NIL+ + ++D GLA
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 415 QDLLSATSNFLAENLIGKGGSSQVYKGCLP--DGKEL--AVKILK---PSEDVIKEFVLE 467
+D++ + + ++G+G V +G L DG L AVK +K S+ I+EF+ E
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE 86
Query: 468 IEIITTLHHKNIISLLGFCFEDNNL-----LLVYDFLSRGSLEENLHGNKKD--PAAFGW 520
+ H N+I LLG C E ++ +++ F+ G L L ++ + P
Sbjct: 87 AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
K + +A +EYL S + +HRD+ + N +L DD ++DFGL+K
Sbjct: 147 QTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++A+K LKP + F+ E +I+ L H ++ L E+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ +V +++++GSL + L + A +A VA + Y+ IHRD
Sbjct: 77 P-IYIVTEYMNKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIER---MNYIHRD 130
Query: 550 VKSSNILLSDDFEPQLSDFGLAK 572
++S+NIL+ + +++DFGLA+
Sbjct: 131 LRSANILVGNGLICKIADFGLAR 153
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 430 IGKGGSSQVYKGCL--PDGK--ELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G V +G P GK +AVK LKP + + +F+ E+ + +L H+N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L G + +V + GSL + L +K F + A+ VAE + YL S
Sbjct: 80 LYGVVLTPP-MKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 133
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R IHRD+ + N+LL+ ++ DFGL + + H
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 119
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 120 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITT 473
L NF IG+G VYK G+ +A+K ++ +E V + EI ++
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVA 531
L+H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 122 ----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 117
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 117
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 117
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 118
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA-- 117
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 --FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 118
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 424 FLAENLIGKGGSSQVYKGCLPDGKEL-AVKI--LKPSEDVIKEFVLEIEIITTLHHKNII 480
F + IGKG +VYKG KE+ A+KI L+ +ED I++ EI +++ I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
G + L ++ ++L GS + L P + + + + L+YLHS
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHS- 134
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGT-FGYVVLILNP 599
+R IHRD+K++N+LLS+ + +L+DFG+A + + I GT F ++
Sbjct: 135 --ERKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 600 IAFLFMFNCW 609
A+ F + W
Sbjct: 191 SAYDFKADIW 200
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 29/148 (19%)
Query: 449 LAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
+AVK+LK PSE +++ + E ++ ++H ++I L G C +D LLL+ ++ GSL
Sbjct: 56 VAVKMLKENASPSE--LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 505 EENLHGNKK--------------------DPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
L ++K D A + A +++ ++YL S
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--- 170
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++HRD+ + NIL+++ + ++SDFGL++
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 119
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 120 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 119
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 120 --FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 120
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 121 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 118
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 --FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 413 NYQDLLSATSNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEFVL-EIEI 470
++D+ TS L+G+G ++V L +GKE AVKI++ + V E+E
Sbjct: 9 KFEDMYKLTSE-----LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET 63
Query: 471 ITTLH-HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMG 529
+ +KNI+ L+ F +D LV++ L GS+ ++ K F E +V
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRD 119
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNIL 556
VA AL++LH+ + + HRD+K NIL
Sbjct: 120 VAAALDFLHT---KGIAHRDLKPENIL 143
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 125
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 126 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L++ + + P S +++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 117
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 430 IGKGGSSQVYKGCL--PDGK--ELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G V +G P GK +AVK LKP + + +F+ E+ + +L H+N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L G + +V + GSL + L +K F + A+ VAE + YL S
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 139
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R IHRD+ + N+LL+ ++ DFGL + + H
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 423 NFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
I+ LL +N L LV++FL + L++ + + + Y + + L + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLLQGLSFCH 120
Query: 539 SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
S RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 121 S---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 125
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 126 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 119
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 120 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 430 IGKGGSSQVYKGCL--PDGK--ELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G V +G P GK +AVK LKP + + +F+ E+ + +L H+N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L G + +V + GSL + L +K F + A+ VAE + YL S
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 139
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R IHRD+ + N+LL+ ++ DFGL + + H
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 430 IGKGGSSQVYKGCL--PDGK--ELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G V +G P GK +AVK LKP + + +F+ E+ + +L H+N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L G + +V + GSL + L +K F + A+ VAE + YL S
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R IHRD+ + N+LL+ ++ DFGL + + H
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 430 IGKGGSSQVYKGCL--PDGK--ELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G V +G P GK +AVK LKP + + +F+ E+ + +L H+N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L G + +V + GSL + L +K F + A+ VAE + YL S
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 133
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R IHRD+ + N+LL+ ++ DFGL + + H
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 430 IGKGGSSQVYKGCL--PDGK--ELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G V +G P GK +AVK LKP + + +F+ E+ + +L H+N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L G + +V + GSL + L +K F + A+ VAE + YL S
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R IHRD+ + N+LL+ ++ DFGL + + H
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 18/151 (11%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVK----ILKPSEDVIKEFVLEIEIITTLH-HKNIISLL 483
+GKG V+K G+ +AVK + S D + F EI I+T L H+NI++LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 484 GFCFEDNN--LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
DN+ + LV+D++ L + N +P + V + + ++YLHSG
Sbjct: 76 NVLRADNDRDVYLVFDYME-TDLHAVIRANILEPV-----HKQYVVYQLIKVIKYLHSGG 129
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++HRD+K SNILL+ + +++DFGL++
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 427 ENLIGKGGSSQVYKG--CLPDGKELAVKI----LKPSEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V G LP +++AV I + +E ++F+ E I+ H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G +++V +F+ G+L+ L +K F + + G+A + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL---RKHDGQFTVIQLVGMLRGIAAGMRYL--- 161
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ +HRD+ + NIL++ + ++SDFGL++
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSR 193
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 430 IGKGGSSQVYKGCL--PDGK--ELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G V +G P GK +AVK LKP + + +F+ E+ + +L H+N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
L G + +V + GSL + L +K F + A+ VAE + YL S
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+R IHRD+ + N+LL+ ++ DFGL + + H
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V G L P +E+ A+K LK ++ ++F+ E I+ H NII
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G + ++++ +++ GSL+ L +K+ F + + G+ ++YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYL--- 132
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
S +HRD+ + NIL++ + ++SDFG+++
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 164
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++FL + L+ + + P S +++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA-- 120
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 121 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G +V G L P +E+ A+K LK ++ ++F+ E I+ H NII
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G + ++++ +++ GSL+ L +K+ F + + G+ ++YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYL--- 126
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
S +HRD+ + NIL++ + ++SDFG+++
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 158
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELA----VKILKPSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK E+ +++ +E V + EI ++ L+H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 119 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKELA----VKILKPSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK E+ +++ +E V + EI ++ L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEALEY 536
I+ LL +N L LV++FL + L++ + + P S +++ G+A +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 426 AENLIGKGGSSQVYKGCLPDGKE----LAVKILKPSEDV--IKEFVLEIEIITTLHHKNI 479
++ +IGKG VY G D + A+K L ++ ++ F+ E ++ L+H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 480 ISLLGFCFEDNNL-LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
++L+G L ++ ++ G L + + +++P + + VA +EYL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV---KDLISFGLQVARGMEYL- 140
Query: 539 SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ Q+ +HRD+ + N +L + F +++DFGLA+
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 377 GNEIVSSPLSTDHD-STELP---KELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGK 432
G S PL DH ST+ P K LH + N++DL+ L E IG+
Sbjct: 72 GEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLV------LGEQ-IGR 124
Query: 433 GGSSQVYKGCL-PDGKELAVKILKPS--EDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
G +V+ G L D +AVK + + D+ +F+ E I+ H NI+ L+G C +
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ +V + + G L + + A ++ A +EYL S IHRD
Sbjct: 185 QPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKCC---IHRD 238
Query: 550 VKSSNILLSDDFEPQLSDFGLAK 572
+ + N L+++ ++SDFG+++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHH 476
L S+F ++G+G QV K D + A+K ++ +E+ + + E+ ++ +L+H
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 477 KNIISLLGFCFEDNN-------------LLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
+ ++ E N L + ++ +L + +H + E
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR---DEY 118
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ + EAL Y+HS Q +IHRD+K NI + + ++ DFGLAK
Sbjct: 119 WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 377 GNEIVSSPLSTDHD-STELP---KELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGK 432
G S PL DH ST+ P K LH + N++DL+ L E IG+
Sbjct: 72 GEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLV------LGEQ-IGR 124
Query: 433 GGSSQVYKGCL-PDGKELAVKILKPS--EDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
G +V+ G L D +AVK + + D+ +F+ E I+ H NI+ L+G C +
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRD 549
+ +V + + G L + + A ++ A +EYL S IHRD
Sbjct: 185 QPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKCC---IHRD 238
Query: 550 VKSSNILLSDDFEPQLSDFGLAK 572
+ + N L+++ ++SDFG+++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G V G ++AVK++K EF E + + L H ++ G C ++
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 490 NNLLLVYDFLSRGSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIH 547
+ +V +++S G L L HG +P S+ ++ V E + +L S + IH
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHGKGLEP-----SQLLEMCYDVCEGMAFLES---HQFIH 127
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAKWA 574
RD+ + N L+ D ++SDFG+ ++
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYV 154
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 461 IKEFVLEIEIITTLHHKNIISLLGFCFEDN--NLLLVYDFLSRGSLEE--NLHGNKKDPA 516
I++ EI I+ L H N++ L+ + N +L +V++ +++G + E L +D A
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 517 AFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWAST 576
F + + K +EYLH Q++IHRD+K SN+L+ +D +++DFG++
Sbjct: 140 RFYFQDLIK-------GIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 577 SSSHITCT 584
S + ++ T
Sbjct: 190 SDALLSNT 197
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G S +V G L P +++ A+K LK +E ++F+ E I+ H NII
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G ++V +++ GSL+ L + F + + GV + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
S +HRD+ + N+L+ + ++SDFGL++
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 427 ENLIGKGGSSQVYKGCL--PDGKEL--AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
E +IG G S +V G L P +++ A+K LK +E ++F+ E I+ H NII
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L G ++V +++ GSL+ L + F + + GV + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
S +HRD+ + N+L+ + ++SDFGL++
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G + +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 81 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLAR 157
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 28/184 (15%)
Query: 420 ATSNFL-AENLIGKGGSSQVYKGCLPDG--KELAVKILKPSEDVIKEFV-LEIEIITTLH 475
A S+F E+ +G+G +S VY+ C G K A+K+LK + D K+ V EI ++ L
Sbjct: 50 ALSDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVD--KKIVRTEIGVLLRLS 106
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENL----HGNKKDPAAFGWSERYKVAMGVA 531
H NII L + LV + ++ G L + + + +++D A +
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA--------DAVKQIL 158
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSD---DFEPQLSDFGLAKWASTSSSHITCTDVAG 588
EA+ YLH ++HRD+K N+L + D +++DFGL+K + V G
Sbjct: 159 EAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCG 212
Query: 589 TFGY 592
T GY
Sbjct: 213 TPGY 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 429 LIGKGGSSQVYKGCLPD-GKELAVKILKPSED--VIKEFVL-EIEIITTLHHKNIISLLG 484
L+G+G V K D G+ +A+K S+D ++K+ + EI+++ L H+N+++LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
C + LV++F+ L++ + P + K + + + HS
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDL----ELFPNGLDYQVVQKYLFQIINGIGFCHS---HN 144
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+IHRD+K NIL+S +L DFG A+
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 449 LAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCFEDNNL----LLVYDFLSRG 502
+AVKI P +D + + E EI +T + H+N++ + +NL L+ F +G
Sbjct: 41 VAVKIF-PLQDK-QSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKG 98
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHS--------GSAQRVIHRDVKSSN 554
SL + L GN W+E VA ++ L YLH G + HRD KS N
Sbjct: 99 SLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKN 153
Query: 555 ILLSDDFEPQLSDFGLA 571
+LL D L+DFGLA
Sbjct: 154 VLLKSDLTAVLADFGLA 170
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 15/147 (10%)
Query: 430 IGKGGSSQVYKGCLPDG---KELAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
IGKG +V+KG D K +A+KI L+ +ED I++ EI +++ + G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+D L ++ ++L GS + L +P ++ + + + L+YLHS ++
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS---EK 139
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
IHRD+K++N+LLS+ E +L+DFG+A
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 424 FLAENLIGKGGSSQVYKGCLPDGKEL---AVKILKPSEDVIKEFVLEIEIITTLHHKNII 480
+ EN IG+G +V K + G + A KI K + + F EIEI+ +L H NII
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 481 SLLGFCFEDN-NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHS 539
L FEDN ++ LV + + G L E + + F S+ ++ V A+ Y H
Sbjct: 70 RLYE-TFEDNTDIYLVMELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHK 124
Query: 540 GSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLA 571
+ V HRD+K N L S D +L DFGLA
Sbjct: 125 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 449 LAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF----CFEDNNLLLVYDFLSRGSL 504
+AVKI + + E+ + + H+NI+ +G D +L L+ F +GSL
Sbjct: 50 VAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSL 109
Query: 505 EENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHS-------GSAQRVIHRDVKSSNILL 557
+ L N W+E +A +A L YLH G + HRD+KS N+LL
Sbjct: 110 SDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL 164
Query: 558 SDDFEPQLSDFGLA 571
++ ++DFGLA
Sbjct: 165 KNNLTACIADFGLA 178
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 424 FLAENLIGKGGSSQVYKGCLPDGKEL---AVKILKPSEDVIKEFVLEIEIITTLHHKNII 480
+ EN IG+G +V K + G + A KI K + + F EIEI+ +L H NII
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 481 SLLGFCFEDN-NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHS 539
L FEDN ++ LV + + G L E + + F S+ ++ V A+ Y H
Sbjct: 87 RLYE-TFEDNTDIYLVMELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHK 141
Query: 540 GSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLA 571
+ V HRD+K N L S D +L DFGLA
Sbjct: 142 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 15/147 (10%)
Query: 430 IGKGGSSQVYKGCLPDG---KELAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
IGKG +V+KG D K +A+KI L+ +ED I++ EI +++ + G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+D L ++ ++L GS + L +P ++ + + + L+YLHS ++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS---EK 124
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
IHRD+K++N+LLS+ E +L+DFG+A
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 15/147 (10%)
Query: 430 IGKGGSSQVYKGCLPDG---KELAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
IGKG +V+KG D K +A+KI L+ +ED I++ EI +++ + G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+D L ++ ++L GS + L +P ++ + + + L+YLHS ++
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS---EK 144
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
IHRD+K++N+LLS+ E +L+DFG+A
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKG-CLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHH 476
L S+F ++G+G QV K D + A+K ++ +E+ + + E+ ++ +L+H
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNH 61
Query: 477 KNIISLLGFCFEDNN-------------LLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
+ ++ E N L + ++ +L + +H + E
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR---DEY 118
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+++ + EAL Y+HS Q +IHR++K NI + + ++ DFGLAK
Sbjct: 119 WRLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 15/147 (10%)
Query: 430 IGKGGSSQVYKGCLPDG---KELAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
IGKG +V+KG D K +A+KI L+ +ED I++ EI +++ + G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+D L ++ ++L GS + L +P ++ + + + L+YLHS ++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS---EK 124
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
IHRD+K++N+LLS+ E +L+DFG+A
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 428 NLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTLHHKNII 480
++G G VYKG +PDG+ + A+K+L+ S KE + E ++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
LLG C + + LV + G L +++ N+ G + M +A+ + YL
Sbjct: 83 RLLGICLT-STVQLVTQLMPYGCLLDHVRENR---GRLGSQDLLNWCMQIAKGMSYLED- 137
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
R++HRD+ + N+L+ +++DFGLA+
Sbjct: 138 --VRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFED--NNLLLVYDFLSRG 502
G +AVK L+ S D ++F EI+I+ LH I+ G + +L LV ++L G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
L + L ++ A S + + + +EYL S +R +HRD+ + NIL+ +
Sbjct: 100 CLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 153
Query: 563 PQLSDFGLAK 572
+++DFGLAK
Sbjct: 154 VKIADFGLAK 163
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFED--NNLLLVYDFLSRG 502
G +AVK L+ S D ++F EI+I+ LH I+ G + +L LV ++L G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
L + L ++ A S + + + +EYL S +R +HRD+ + NIL+ +
Sbjct: 112 CLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 165
Query: 563 PQLSDFGLAK 572
+++DFGLAK
Sbjct: 166 VKIADFGLAK 175
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFED--NNLLLVYDFLSRG 502
G +AVK L+ S D ++F EI+I+ LH I+ G + +L LV ++L G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
L + L ++ A S + + + +EYL S +R +HRD+ + NIL+ +
Sbjct: 99 CLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 152
Query: 563 PQLSDFGLAK 572
+++DFGLAK
Sbjct: 153 VKIADFGLAK 162
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
+GKG +V++G G+ +AVKI ++ K + E E+ T L H+NI LGF
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENI---LGFIA 98
Query: 488 ED-------NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
D L L+ + GSL + L D + ++ + +A L +LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIE 153
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
+ + HRD+KS NIL+ + + ++D GLA S S++ +
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 199
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 446 GKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN--LLLVYDFLSRG 502
G +AVK L+ S D ++F EI+I+ LH I+ G + L LV ++L G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
L + L ++ A S + + + +EYL S +R +HRD+ + NIL+ +
Sbjct: 96 CLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAH 149
Query: 563 PQLSDFGLAK 572
+++DFGLAK
Sbjct: 150 VKIADFGLAK 159
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 89 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 140
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLAR 165
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 26/175 (14%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCL------PDGKELAVKILKPSED--VIKEFVLEIE 469
LSA F+ E +G+ +VYKG L + +A+K LK + + +EF E
Sbjct: 8 LSAV-RFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 470 IITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENL-----H---GNKKD----PAA 517
+ L H N++ LLG +D L +++ + S G L E L H G+ D +A
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 518 FGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ + +A +EYL S+ V+H+D+ + N+L+ D ++SD GL +
Sbjct: 125 LEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 91 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 142
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLAR 167
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 26/175 (14%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCL------PDGKELAVKILKPSED--VIKEFVLEIE 469
LSA F+ E +G+ +VYKG L + +A+K LK + + +EF E
Sbjct: 25 LSAV-RFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 470 IITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENL-----H---GNKKD----PAA 517
+ L H N++ LLG +D L +++ + S G L E L H G+ D +A
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 518 FGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ + +A +EYL S+ V+H+D+ + N+L+ D ++SD GL +
Sbjct: 142 LEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 87 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 138
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLAR 163
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILK--PSEDVIKEFVLEIEIITTL 474
+S++S F +G G + VYKG G +A+K +K E + EI ++ L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLS---RGSLEENLHGNKKDPAAFGWSERYKVAMGVA 531
H+NI+ L +N L LV++F+ + ++ GN + ++ +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--L 118
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ L + H +++HRD+K N+L++ + +L DFGLA+
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 83 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 134
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLAR 159
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 87 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 138
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLAR 163
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 82 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 133
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLAR 158
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 76 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 127
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLAR 152
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
+GKG +V++G G+ +AVKI ++ K + E E+ T L H+NI LGF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENI---LGFIA 69
Query: 488 ED-------NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
D L L+ + GSL + L D + ++ + +A L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIE 124
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
+ + HRD+KS NIL+ + + ++D GLA S S++ +
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 170
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 81 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLAR 157
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 86 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 137
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLAR 162
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
+GKG +V++G G+ +AVKI ++ K + E E+ T L H+NI LGF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE--KSWFRETELYNTVMLRHENI---LGFIA 69
Query: 488 ED-------NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
D L L+ + GSL + L D + ++ + +A L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIE 124
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
+ + HRD+KS NIL+ + + ++D GLA S S++ +
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 170
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 90 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 141
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLAR 166
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 81 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLAR 157
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 81 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
RD++++NIL+SD +++DFGLA+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLAR 157
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 445 DGKELAVK---ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
DG++ +K I + S +E E+ ++ + H NI+ E+ +L +V D+
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
G L + ++ K F + + + AL+++H ++++HRD+KS NI L+ D
Sbjct: 108 GDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDG 162
Query: 562 EPQLSDFGLAK 572
QL DFG+A+
Sbjct: 163 TVQLGDFGIAR 173
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 17/140 (12%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 503 SLEENLHGNKKDPAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
+L L + + + + YK + VA+ +E+L ++++ IHRD+ +
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAA 176
Query: 553 SNILLSDDFEPQLSDFGLAK 572
NILLS+ ++ DFGLA+
Sbjct: 177 RNILLSEKNVVKICDFGLAR 196
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 448 ELAVKILKPSE--DVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK + D + + E++I++ L H+NI++LLG C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 505 EENLHGNKK----DPAAFGWSERYKVAMGVAEALEYLHSGS----------AQRVIHRDV 550
L + DPA + +A A + LH S ++ IHRDV
Sbjct: 138 LNFLRRKSRVLETDPA-------FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
Query: 551 KSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
+ N+LL++ ++ DFGLA+ S++I
Sbjct: 191 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 423 NFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLHHKN 478
NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALE 535
I+ LL +N L LV+ E++H + K D +A + + + L+
Sbjct: 63 IVKLLDVIHTENKLYLVF---------EHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
L + RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILK---PSEDVIKEFVLEIEIITTLH 475
+ NF IG+G VYK G+ +A+K ++ +E V + EI ++ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYKVAMGVAEA 533
H NI+ LL +N L LV++ + + L++ + + P S +++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 120
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ HS RV+HRD+K N+L++ + +L+DFGLA+
Sbjct: 121 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 430 IGKGGSSQVYKG-CLPDGKELAVK---ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
IG+G +V+K G+++A+K + E + EI+I+ L H+N+++L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 486 CFED--------NNLLLVYDFLSRGSLEENLHGNKKDP-AAFGWSERYKVAMGVAEALEY 536
C ++ LV+DF E +L G + F SE +V + L Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+H +++HRD+K++N+L++ D +L+DFGLA+
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 423 NFLAENLIGKGGSSQV--YKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNI 479
++L +G+GG S V +G L DG A+K IL + +E E ++ +H NI
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 480 ISLLGFCFED----NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
+ L+ +C + + L+ F RG+L + K + + +G+ LE
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFG 569
+H A+ HRD+K +NILL D+ +P L D G
Sbjct: 149 AIH---AKGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 448 ELAVKILKPSE--DVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK + D + + E++I++ L H+NI++LLG C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 505 EENLHG------NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS 558
L +K+D + + VA+ + +L +++ IHRDV + N+LL+
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 559 DDFEPQLSDFGLAKWASTSSSHIT 582
+ ++ DFGLA+ S++I
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIV 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLH------GNKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 434 GSSQVYKGCLPDGK--ELAVKILKPSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDN 490
GS V K C+ E AVKI+ S+ ++ EIEI+ H NII+L +
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGK 89
Query: 491 NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDV 550
+ +V + + G L + + K F E V + + +EYLH AQ V+HRD+
Sbjct: 90 YVYVVTELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLH---AQGVVHRDL 142
Query: 551 KSSNILLSDDF-EPQ---LSDFGLAK 572
K SNIL D+ P+ + DFG AK
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAK 168
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
+GKG +V++G L G+ +AVKI ++ + + E EI T L H NI LGF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDE--QSWFRETEIYNTVLLRHDNI---LGFIA 69
Query: 488 ED-------NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH-- 538
D L L+ + GSL + L +P ++A+ A L +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL-----ALRLAVSAACGLAHLHVE 124
Query: 539 ---SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHI 581
+ + HRD KS N+L+ + + ++D GLA S S ++
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYL 170
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 448 ELAVKILKPSE--DVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK + D + + E++I++ L H+NI++LLG C +L++ ++ G L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 505 EENLHG------NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS 558
L +K+D + + VA+ + +L +++ IHRDV + N+LL+
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 559 DDFEPQLSDFGLAKWASTSSSHIT 582
+ ++ DFGLA+ S++I
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIV 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLH------GNKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFED 489
+G G +V+ G ++AVK LK F+ E ++ L H+ ++ L ++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 490 NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS--ERYKVAMGVAEALEYLHSGSAQRVIH 547
+ ++ +++ GSL + L K P+ + + +A +AE + ++ + IH
Sbjct: 77 P-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 128
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAK 572
R+++++NIL+SD +++DFGLA+
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLAR 153
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ LAV I S+ V ++F+ E + H +I+ L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 135
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ LAV I S+ V ++F+ E + H +I+ L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 158
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 195
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 430 IGKGGSSQVYKGCLPD-GKELAVKILKPSED--VIKEFVL-EIEIITTLHHKNIISLLGF 485
IG+G V+K D G+ +A+K SED VIK+ L EI ++ L H N+++LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 486 CFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
L LV+++ L E + P S + +A+ + H +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS----ITWQTLQAVNFCHKHNC--- 123
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
IHRDVK NIL++ +L DFG A+ + S +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 430 IGKGGSSQVYKG-CLPDGKELAVK---ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
IG+G +V+K G+++A+K + E + EI+I+ L H+N+++L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 486 CFED--------NNLLLVYDFLSRGSLEENLHGNKKDP-AAFGWSERYKVAMGVAEALEY 536
C ++ LV+DF E +L G + F SE +V + L Y
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+H +++HRD+K++N+L++ D +L+DFGLA+
Sbjct: 140 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y++
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK-WASTSSSHIT 582
+ A++YLH +IHRD+K N+LLS +D +++DFG +K TS
Sbjct: 124 LL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 583 CTDVAGTFGYVVLILNPIAFLFMFNCW 609
C V++ + + +CW
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCW 203
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y++
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK-WASTSSSHIT 582
+ A++YLH +IHRD+K N+LLS +D +++DFG +K TS
Sbjct: 130 LL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 182
Query: 583 CTDVAGTFGYVVLILNPIAFLFMFNCW 609
C V++ + + +CW
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCW 209
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 430 IGKGGSSQVYKG-CLPDGKELAVK---ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
IG+G +V+K G+++A+K + E + EI+I+ L H+N+++L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 486 CFED--------NNLLLVYDFLSRGSLEENLHGNKKDP-AAFGWSERYKVAMGVAEALEY 536
C ++ LV+DF E +L G + F SE +V + L Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFC-----EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+H +++HRD+K++N+L++ D +L+DFGLA+
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ LAV I S+ V ++F+ E + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 130
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 166 AARNILLSEKNVVKICDFGLAR 187
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ LAV I S+ V ++F+ E + H +I+ L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 132
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 169
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ LAV I S+ V ++F+ E + H +I+ L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 133
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 170
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N ++++DF ++ DFG+ +
Sbjct: 175 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y++
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK-WASTSSSHIT 582
+ A++YLH +IHRD+K N+LLS +D +++DFG +K TS
Sbjct: 124 LL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 583 CTDVAGTFGYVVLILNPIAFLFMFNCW 609
C V++ + + +CW
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCW 203
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y++
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK-WASTSSSHIT 582
+ A++YLH +IHRD+K N+LLS +D +++DFG +K TS
Sbjct: 124 LL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 583 CTDVAGTFGYVVLILNPIAFLFMFNCW 609
C V++ + + +CW
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCW 203
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y++
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK-WASTSSSHIT 582
+ A++YLH +IHRD+K N+LLS +D +++DFG +K TS
Sbjct: 123 LL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 175
Query: 583 CTDVAGTFGYVVLILNPIAFLFMFNCW 609
C V++ + + +CW
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCW 202
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ LAV I S+ V ++F+ E + H +I+ L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 127
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 166 AARNILLSEKNVVKICDFGLAR 187
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 175 AARNILLSEKNVVKICDFGLAR 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 377 GNEIVSSPLSTDHDSTELPKELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSS 436
G E+ + LS D ELP + Y A+ F L +G+G
Sbjct: 26 GGELKTGYLSIVMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFG 78
Query: 437 QVYKG----------CLPDGKELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLL 483
QV + C + +AVK+LK + + + E++I+ + HH N+++LL
Sbjct: 79 QVIEADAFGIDKTATC----RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134
Query: 484 GFCFEDNN-LLLVYDFLSRGSLEENLHGNKKD--PAAFGWSERYK----------VAMGV 530
G C + L+++ +F G+L L + + P + YK + V
Sbjct: 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQV 194
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A+ +E+L ++++ IHRD+ + NILLS+ ++ DFGLA+
Sbjct: 195 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 166 AARNILLSEKNVVKICDFGLAR 187
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 448 ELAVKILKPSEDV--IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
++A+K+LK + +E + E +I+ L + I+ L+G C + L+LV + G L
Sbjct: 39 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 97
Query: 506 ENLHGNKKD-PAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQ 564
+ L G +++ P + ++V+MG ++YL + +HRD+ + N+LL + +
Sbjct: 98 KFLVGKREEIPVSNVAELLHQVSMG----MKYLEE---KNFVHRDLAARNVLLVNRHYAK 150
Query: 565 LSDFGLAKWASTSSSHIT 582
+SDFGL+K S+ T
Sbjct: 151 ISDFGLSKALGADDSYYT 168
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 166 AARNILLSEKNVVKICDFGLAR 187
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 175 AARNILLSEKNVVKICDFGLAR 196
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 430 IGKGGSSQVYKG-CLPDGKELAVK---ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
IG+G +V+K G+++A+K + E + EI+I+ L H+N+++L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 486 CFEDNN--------LLLVYDFLSRGSLEENLHGNKKDP-AAFGWSERYKVAMGVAEALEY 536
C + + LV+DF E +L G + F SE +V + L Y
Sbjct: 86 CRTKASPYNRCKASIYLVFDFC-----EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+H +++HRD+K++N+L++ D +L+DFGLA+
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVYKGCL------PDGKELAVKILKP--SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G +VY+G + P ++AVK L SE +F++E II+ L+H+NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLH 538
+G + ++ + ++ G L+ L + P++ + VA +A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 539 SGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK 572
IHRD+ + N LL+ ++ DFG+A+
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 175 AARNILLSEKNVVKICDFGLAR 196
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 465 VLEIEIITTLHHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
++E +I+ +H + I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 233 MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITC 583
+ LE+LH + +I+RD+K N+LL DD ++SD GLA +
Sbjct: 292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT 346
Query: 584 TDVAGTFGYVV 594
AGT G++
Sbjct: 347 KGYAGTPGFMA 357
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 419 SATSNFLAE-----------NLIGKGGSSQVYKGCLPDGKELAVKIL---KPSEDVIKEF 464
S TS FL E LIGKG QVY G E+A++++ + +ED +K F
Sbjct: 19 SQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAF 76
Query: 465 VLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY 524
E+ H+N++ +G C +L ++ +L + K ++
Sbjct: 77 KREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTR 133
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGL 570
++A + + + YLH A+ ++H+D+KS N+ D+ + ++DFGL
Sbjct: 134 QIAQEIVKGMGYLH---AKGILHKDLKSKNVFY-DNGKVVITDFGL 175
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 418 LSATSNFLAENLIGKGGSSQVYKGCLPDGK--ELAVKILKPSEDVIKEFVLEIEIITTL- 474
L + ++ + IG G S+ K C+ E AVK++ S+ E EIEI+
Sbjct: 23 LVFSDGYVVKETIGVGSYSEC-KRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYG 78
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NII+L + ++ LV + + G L + + K F E V + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTV 134
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDF-EPQ---LSDFGLAK 572
EYLHS Q V+HRD+K SNIL D+ P+ + DFG AK
Sbjct: 135 EYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 465 VLEIEIITTLHHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
++E +I+ +H + I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 233 MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITC 583
+ LE+LH + +I+RD+K N+LL DD ++SD GLA +
Sbjct: 292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT 346
Query: 584 TDVAGTFGYVV 594
AGT G++
Sbjct: 347 KGYAGTPGFMA 357
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 465 VLEIEIITTLHHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
++E +I+ +H + I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 233 MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITC 583
+ LE+LH + +I+RD+K N+LL DD ++SD GLA +
Sbjct: 292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT 346
Query: 584 TDVAGTFGYVV 594
AGT G++
Sbjct: 347 KGYAGTPGFMA 357
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +AE +
Sbjct: 72 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAEGM 127
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 128 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 162
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 465 VLEIEIITTLHHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSER 523
++E +I+ +H + I+SL + FE +L LV ++ G + +++ +D F
Sbjct: 233 MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITC 583
+ LE+LH + +I+RD+K N+LL DD ++SD GLA +
Sbjct: 292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKT 346
Query: 584 TDVAGTFGYVV 594
AGT G++
Sbjct: 347 KGYAGTPGFMA 357
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 448 ELAVKILKPSE--DVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK + D + + E++I++ L H+NI++LLG C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 505 EENLHGNKK----DPA------AFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
L + DPA + + VA+ + +L +++ IHRDV + N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 194
Query: 555 ILLSDDFEPQLSDFGLAKWASTSSSHIT 582
+LL++ ++ DFGLA+ S++I
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIV 222
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVYKGCL------PDGKELAVKILKP--SEDVIKEFVLEIEIITTLHHKNIIS 481
+G G +VY+G + P ++AVK L SE +F++E II+ L+H+NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLH 538
+G + ++ + ++ G L+ L + P++ + VA +A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 539 SGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK 572
IHRD+ + N LL+ ++ DFG+A+
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 22/164 (13%)
Query: 422 SNFLAENLIGKGGSSQVY---KGCLPD-GKELAVKILKPSEDVIKEFV---LEIEIITTL 474
S+F ++G+G +V+ K PD G A+K+LK + +++ V +E +I+ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 475 HHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGN---KKDPAAFGWSERYKVAMGV 530
+H ++ L + F+ + L L+ DFL G L L ++ F +E +A+G
Sbjct: 88 NHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE---LALG- 142
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
L++LHS +I+RD+K NILL ++ +L+DFGL+K A
Sbjct: 143 ---LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEA 180
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ +AV I S+ V ++F+ E + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLES---K 130
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEI--ITTLHHKNIISLLGFC 486
LIG+G VYKG L D + +AVK+ + + F+ E I + + H NI F
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANR--QNFINEKNIYRVPLMEHDNIAR---FI 73
Query: 487 FEDNNL--------LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
D + LLV ++ GSL + L + D W ++A V L YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLH 128
Query: 539 S----GSAQR--VIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ G + + HRD+ S N+L+ +D +SDFGL+
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 29/143 (20%)
Query: 445 DGKELAVKILKPSEDVIKEFVLEIE----------IITTLHHKNIISLLGFCFEDNNLLL 494
+G+ A+K+LK KE V+ ++ +++ + H II + G + + +
Sbjct: 30 NGRYYAMKVLK------KEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83
Query: 495 VYDFLSRGSLEENLHGNKKDP---AAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
+ D++ G L L +++ P A F A V ALEYLHS + +I+RD+K
Sbjct: 84 IMDYIEGGELFSLLRKSQRFPNPVAKF-------YAAEVCLALEYLHS---KDIIYRDLK 133
Query: 552 SSNILLSDDFEPQLSDFGLAKWA 574
NILL + +++DFG AK+
Sbjct: 134 PENILLDKNGHIKITDFGFAKYV 156
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 434 GSSQVYKGCLPDG--KELAVKILKPSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDN 490
GS V K C+ E AVKI+ S+ ++ EIEI+ H NII+L +
Sbjct: 33 GSYSVCKRCIHKATNXEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGK 89
Query: 491 NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDV 550
+ +V + G L + + K F E V + + +EYLH AQ V+HRD+
Sbjct: 90 YVYVVTELXKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLH---AQGVVHRDL 142
Query: 551 KSSNILLSDDF-EPQ---LSDFGLAK 572
K SNIL D+ P+ + DFG AK
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAK 168
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 18/141 (12%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 503 SLEENLHGNKKDPAAFGWSER-YK----------VAMGVAEALEYLHSGSAQRVIHRDVK 551
+L L + + + E YK + VA+ +E+L ++++ IHRD+
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 552 SSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 176 ARNILLSEKNVVKICDFGLAR 196
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCLPDGK--ELAVKILKPSEDVIKEFVLEIEIITTL-HHK 477
+ ++ + IG G S+ K C+ E AVK++ S+ E EIEI+ H
Sbjct: 26 SDGYVVKETIGVGSYSEC-KRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYGQHP 81
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
NII+L + ++ LV + + G L + + K F E V + + +EYL
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYL 137
Query: 538 HSGSAQRVIHRDVKSSNILLSDDF-EPQ---LSDFGLAK 572
HS Q V+HRD+K SNIL D+ P+ + DFG AK
Sbjct: 138 HS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 467 EIEIITTLHHKNIISLLGFCFED-NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYK 525
EIE++ +L H NII + FED +N+ +V + G L E + + A +
Sbjct: 70 EIEVLKSLDHPNIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE 128
Query: 526 VAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDD--FEP-QLSDFGLAKWASTSSSHIT 582
+ + AL Y HS Q V+H+D+K NIL D P ++ DFGLA+ S H
Sbjct: 129 LMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEH-- 182
Query: 583 CTDVAGTFGYV 593
T+ AGT Y+
Sbjct: 183 STNAAGTALYM 193
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 448 ELAVKILKPSE--DVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK + D + + E++I++ L H+NI++LLG C +L++ ++ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 505 EENLHGNKKDPAAFGWS--------------ERYKVAMGVAEALEYLHSGSAQRVIHRDV 550
L +K P +S + + VA+ + +L +++ IHRDV
Sbjct: 138 LNFLR--RKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDV 192
Query: 551 KSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
+ N+LL++ ++ DFGLA+ S++I
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ +AV I S+ V ++F+ E + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 130
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSS 578
R +HRD+ + N+L+S + +L DFGL+++ S+
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 19/140 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 503 SLEENLHGNKKDPAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
+L L + + + + YK + VA+ +E+L ++++ IHRD+ +
Sbjct: 118 NLSTYLRSKRNEFVPY--KDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAA 172
Query: 553 SNILLSDDFEPQLSDFGLAK 572
NILLS+ ++ DFGLA+
Sbjct: 173 RNILLSEKNVVKICDFGLAR 192
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 503 SLEENLHGNKKD--PAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDV 550
+L L + + P + YK + VA+ +E+L ++++ IHRD+
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 176
Query: 551 KSSNILLSDDFEPQLSDFGLAK 572
+ NILLS+ ++ DFGLA+
Sbjct: 177 AARNILLSEKNVVKICDFGLAR 198
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYV 173
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ +AV I S+ V ++F+ E + H +I+ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 510
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S + +L DFGL+++ S+ +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 430 IGKGGSSQVY----KGCLPDGKE--LAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY KG + D E +A+K + + + + EF+ E ++ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHG------NKKDPAAFGWSERYKVAMGVAEALE 535
LLG + L++ + ++RG L+ L N A S+ ++A +A+ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL+ A + +HRD+ + N +++DF ++ DFG+ +
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG+G VYK G+ A+K + K E + + EI I+ L H NI+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 487 FEDNNLLLVYDFLSRG--SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
L+LV++ L + L + G + A + + + + Y H +R
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF------LLQLLNGIAYCHD---RR 120
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAK 572
V+HRD+K N+L++ + E +++DFGLA+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG+G VYK G+ A+K + K E + + EI I+ L H NI+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 487 FEDNNLLLVYDFLSRG--SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
L+LV++ L + L + G + A + + + + Y H +R
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF------LLQLLNGIAYCHD---RR 120
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAK 572
V+HRD+K N+L++ + E +++DFGLA+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG+G VYK G+ A+K + K E + + EI I+ L H NI+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 487 FEDNNLLLVYDFLSRG--SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
L+LV++ L + L + G + A + + + + Y H +R
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF------LLQLLNGIAYCHD---RR 120
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAK 572
V+HRD+K N+L++ + E +++DFGLA+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 422 SNFLAENLIGKGGSSQVY---KGCLPDGKEL-AVKILKPSEDVIKEFV---LEIEIITTL 474
S F ++G+G +V+ K D ++L A+K+LK + +++ V +E +I+ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 475 HHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGN---KKDPAAFGWSERYKVAMGV 530
+H I+ L + F+ + L L+ DFL G L L ++ F +E +
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------L 135
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A AL++LHS +I+RD+K NILL ++ +L+DFGL+K
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMXGTLPYV 174
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 422 SNFLAENLIGKGGSSQVY---KGCLPDGKEL-AVKILKPSEDVIKEFV---LEIEIITTL 474
S F ++G+G +V+ K D ++L A+K+LK + +++ V +E +I+ +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 475 HHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGN---KKDPAAFGWSERYKVAMGV 530
+H I+ L + F+ + L L+ DFL G L L ++ F +E +
Sbjct: 85 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------L 136
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A AL++LHS +I+RD+K NILL ++ +L+DFGL+K
Sbjct: 137 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 79 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 134
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 135 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 422 SNFLAENLIGKGGSSQVY---KGCLPDGKEL-AVKILKPSEDVIKEFV---LEIEIITTL 474
S F ++G+G +V+ K D ++L A+K+LK + +++ V +E +I+ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 475 HHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGN---KKDPAAFGWSERYKVAMGV 530
+H I+ L + F+ + L L+ DFL G L L ++ F +E +
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------L 135
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
A AL++LHS +I+RD+K NILL ++ +L+DFGL+K
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE----DVIKEFVLEIEIITTLHHKNIISLLGF 485
+G G +V K L G ++AVKIL + DV+ + EI+ + H +II L
Sbjct: 26 VGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 486 CFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+++ +V +++S G L + + N + E ++ + ++Y H V
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKESRRLFQQILSGVDYCHR---HMV 137
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAKWAS 575
+HRD+K N+LL +++DFGL+ S
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 17/148 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKEL-AVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
IGKG +V+KG +++ A+KI L+ +ED I++ EI +++ + G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAE---ALEYLHSGSAQ 543
+ + L ++ ++L GS + L D +++A + E L+YLHS +
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGPFD--------EFQIATMLKEILKGLDYLHS---E 139
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ IHRD+K++N+LLS+ + +L+DFG+A
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G ++AVKIL S DV+ + EI+ + H +II L + +V +++S
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 502 GSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSD 559
G L + + HG ++ E ++ + A++Y H V+HRD+K N+LL
Sbjct: 96 GELFDYICKHGRVEE------MEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDA 146
Query: 560 DFEPQLSDFGLAKWAS 575
+++DFGL+ S
Sbjct: 147 HMNAKIADFGLSNMMS 162
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 77 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 132
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 78 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 133
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G ++AVKIL S DV+ + EI+ + H +II L + +V +++S
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 502 GSLEENL--HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSD 559
G L + + HG ++ E ++ + A++Y H V+HRD+K N+LL
Sbjct: 96 GELFDYICKHGRVEE------MEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDA 146
Query: 560 DFEPQLSDFGLAKWAS 575
+++DFGL+ S
Sbjct: 147 HMNAKIADFGLSNMMS 162
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 403 EKYSATCRLFNYQDLLSATSN-FLAENLIGKGGSSQVYKGCLP--DGKELAVKILKPSED 459
+K++ C+ N + + T N F +IG+GG +VY GC GK A+K L
Sbjct: 169 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 227
Query: 460 VIKE---FVLEIEIITTLHHKN---IISLLGFCFED-NNLLLVYDFLSRGSLEENLHGNK 512
+K+ L I+ +L I + + F + L + D ++ G +LH +
Sbjct: 228 KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----DLHYHL 283
Query: 513 KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
F ++ A + LE++H+ + V++RD+K +NILL + ++SD GLA
Sbjct: 284 SQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 340
Query: 573 WASTSSSHITCTDVAGTFGYV 593
S H + GT GY+
Sbjct: 341 DFSKKKPHAS----VGTHGYM 357
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 403 EKYSATCRLFNYQDLLSATSN-FLAENLIGKGGSSQVYKGCLP--DGKELAVKILKPSED 459
+K++ C+ N + + T N F +IG+GG +VY GC GK A+K L
Sbjct: 168 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 226
Query: 460 VIKE---FVLEIEIITTLHHKN---IISLLGFCFED-NNLLLVYDFLSRGSLEENLHGNK 512
+K+ L I+ +L I + + F + L + D ++ G +LH +
Sbjct: 227 KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----DLHYHL 282
Query: 513 KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
F ++ A + LE++H+ + V++RD+K +NILL + ++SD GLA
Sbjct: 283 SQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 339
Query: 573 WASTSSSHITCTDVAGTFGYV 593
S H + GT GY+
Sbjct: 340 DFSKKKPHAS----VGTHGYM 356
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 419 SATSNFLAENLIGKGGSSQVYKGCL--PDGKELAVKIL---KPSEDVIKEFVLEIEIITT 473
S T + +GKG S V + C+ P G+E A KI+ K S ++ E I
Sbjct: 1 SMTDEYQLFEELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL 59
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEA 533
L H NI+ L E+ LV+D ++ G L E++ A + + + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADASHCIQQI 112
Query: 534 LEYLHSGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTF 590
LE ++ ++HRD+K N+LL S +L+DFGLA AGT
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTP 170
Query: 591 GYV 593
GY+
Sbjct: 171 GYL 173
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCL--PDGKELAVKILKPSEDVIKEFV---LEIEIITTLH 475
+ N+ + +GKG S V + C+ G E A KI+ + ++F E I L
Sbjct: 28 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NI+ L E++ LV+D ++ G L E++ + + ++ + E++
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESIA 142
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEP---QLSDFGLAKWASTSSSHITCTDVAGTFGY 592
Y HS ++HR++K N+LL+ + +L+DFGLA + S + AGT GY
Sbjct: 143 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGY 196
Query: 593 V 593
+
Sbjct: 197 L 197
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 75 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 130
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y++
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK 572
+ A++YLH +IHRD+K N+LLS +D +++DFG +K
Sbjct: 263 LL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 19/140 (13%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 503 SLEENLHGNKKDPAAFGWSERYK----------VAMGVAEALEYLHSGSAQRVIHRDVKS 552
+L L + + + + YK + VA+ +E+L ++++ IHRD+ +
Sbjct: 118 NLSTYLRSKRNEFVPY--KDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAA 172
Query: 553 SNILLSDDFEPQLSDFGLAK 572
NILLS+ ++ DFGLA+
Sbjct: 173 RNILLSEKNVVKIXDFGLAR 192
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 403 EKYSATCRLFNYQDLLSATSN-FLAENLIGKGGSSQVYKGCLP--DGKELAVKILKPSED 459
+K++ C+ N + + T N F +IG+GG +VY GC GK A+K L
Sbjct: 169 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 227
Query: 460 VIKE---FVLEIEIITTLHHKN---IISLLGFCFED-NNLLLVYDFLSRGSLEENLHGNK 512
+K+ L I+ +L I + + F + L + D ++ G +LH +
Sbjct: 228 KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----DLHYHL 283
Query: 513 KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
F ++ A + LE++H+ + V++RD+K +NILL + ++SD GLA
Sbjct: 284 SQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 340
Query: 573 WASTSSSHITCTDVAGTFGYV 593
S H + GT GY+
Sbjct: 341 DFSKKKPHAS----VGTHGYM 357
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 403 EKYSATCRLFNYQDLLSATSN-FLAENLIGKGGSSQVYKGCLP--DGKELAVKILKPSED 459
+K++ C+ N + + T N F +IG+GG +VY GC GK A+K L
Sbjct: 169 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRI 227
Query: 460 VIKE---FVLEIEIITTLHHKN---IISLLGFCFED-NNLLLVYDFLSRGSLEENLHGNK 512
+K+ L I+ +L I + + F + L + D ++ G +LH +
Sbjct: 228 KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG----DLHYHL 283
Query: 513 KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
F ++ A + LE++H+ + V++RD+K +NILL + ++SD GLA
Sbjct: 284 SQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 340
Query: 573 WASTSSSHITCTDVAGTFGYV 593
S H + GT GY+
Sbjct: 341 DFSKKKPHAS----VGTHGYM 357
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EIEI+ L+H II + F F+ + +V + + G L + + GNK+ A Y++
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLS---DDFEPQLSDFGLAK 572
+ A++YLH +IHRD+K N+LLS +D +++DFG +K
Sbjct: 249 LL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 76 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 131
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 132 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 76 DNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGM 131
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 132 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 448 ELAVKILKPSEDV--IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
++A+K+LK + +E + E +I+ L + I+ L+G C + L+LV + G L
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 423
Query: 506 ENLHGNKKD-PAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQ 564
+ L G +++ P + ++V+MG ++YL + +HR++ + N+LL + +
Sbjct: 424 KFLVGKREEIPVSNVAELLHQVSMG----MKYLEE---KNFVHRNLAARNVLLVNRHYAK 476
Query: 565 LSDFGLAKWASTSSSHIT 582
+SDFGL+K S+ T
Sbjct: 477 ISDFGLSKALGADDSYYT 494
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 81 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 136
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 137 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 419 SATSNFLAENLIGKGGSSQVYKGCL--PDGKELAVKIL---KPSEDVIKEFVLEIEIITT 473
S T + +GKG S V + C+ P G+E A KI+ K S ++ E I
Sbjct: 1 SMTDEYQLFEELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL 59
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEA 533
L H NI+ L E+ LV+D ++ G L E++ A + + + +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADASHCIQQI 112
Query: 534 LEYLHSGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTF 590
LE ++ ++HRD+K N+LL S +L+DFGLA AGT
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTP 170
Query: 591 GYV 593
GY+
Sbjct: 171 GYL 173
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 82 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 137
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 133
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 187
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 130
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 78 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 133
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 77 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 132
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYV 174
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYV 174
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYV 174
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 78 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 133
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 78 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 133
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 134 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 130
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYV 174
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDN---IGSQYLLNWCVQIAKGM 130
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 85 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 140
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 141 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 69 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 124
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ +AV I S+ V ++F+ E + H +I+ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 130
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S +L DFGL+++ S+ +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 167
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 100 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 155
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 156 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 93 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 145
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 146 DFGLATVFRYNNRERLLNKMCGTLPYV 172
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 71
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 125
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 428 NLIGKGGSSQVYKGCL--PDGKELAVKILK----------PSEDVIKEFVLEIEIITTLH 475
+IGKG S V + C+ G++ AVKI+ +ED+ +E I L
Sbjct: 30 EVIGKGAFS-VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE----ASICHMLK 84
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY--KVAMGVAEA 533
H +I+ LL D L +V++F+ L + K+ A F +SE + EA
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEA 142
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLS--DDFEP-QLSDFGLA 571
L Y H + +IHRDVK N+LL+ ++ P +L DFG+A
Sbjct: 143 LRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 446 GKELAVKILKPSEDVI---KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G+++A+K + + DV+ K + E++I+ H NII++ E ++ +V
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 139
Query: 497 DFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNIL 556
D + L + +H ++ Y++ G L+Y+HS +VIHRD+K SN+L
Sbjct: 140 DLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRG----LKYMHSA---QVIHRDLKPSNLL 191
Query: 557 LSDDFEPQLSDFGLAKWASTSSS 579
++++ E ++ DFG+A+ TS +
Sbjct: 192 VNENCELKIGDFGMARGLCTSPA 214
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYV 174
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCL--PDGKELAVKILKPSEDVIKEFV---LEIEIITTLH 475
+ N+ + +GKG S V + C+ G E A KI+ + ++F E I L
Sbjct: 5 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NI+ L E++ LV+D ++ G L E++ + + ++ + E++
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESIA 119
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFE---PQLSDFGLAKWASTSSSHITCTDVAGTFGY 592
Y HS ++HR++K N+LL+ + +L+DFGLA + S + AGT GY
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGY 173
Query: 593 V 593
+
Sbjct: 174 L 174
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 71
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 125
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 430 IGKGGSSQVYKGCLPDGKEL-AVKILKPSEDV----IKEFVLEIEIITTLHHKNIISLLG 484
IGKG +V D K++ A+K + + V ++ E++I+ L H +++L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL-W 81
Query: 485 FCFEDN-NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
+ F+D ++ +V D L G L +L N F + AL+YL + Q
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQN---Q 134
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
R+IHRD+K NILL + ++DF +A + T +AGT Y+
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYM 181
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCL--PDGKELAVKIL---KPSEDVIKEFVLEIEIITTLH 475
+ N+ + +GKG S V + C+ G E A KI+ K S ++ E I L
Sbjct: 4 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NI+ L E++ LV+D ++ G L E++ + + ++ + E++
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESIA 118
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFE---PQLSDFGLAKWASTSSSHITCTDVAGTFGY 592
Y HS ++HR++K N+LL+ + +L+DFGLA + S + AGT GY
Sbjct: 119 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGY 172
Query: 593 V 593
+
Sbjct: 173 L 173
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYV 174
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYV 173
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 71
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 125
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
IG G VY + + + +A+K + K S + ++ + E+ + L H N I G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
++ LV ++ GS + L +KK E V G + L YLHS
Sbjct: 122 CYLREHTAWLVMEY-CLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHS---HN 174
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
+IHRDVK+ NILLS+ +L DFG A
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSA 201
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 74
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 128
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 444 PDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFL 499
P G +A K++ KP+ + + + E++++ + I+ G + D + + + +
Sbjct: 39 PSGLIMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 96
Query: 500 SRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSD 559
GSL++ L K+ P KV++ V L YL +++HRDVK SNIL++
Sbjct: 97 DGGSLDQVLKEAKRIPEEI----LGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNS 150
Query: 560 DFEPQLSDFGLA 571
E +L DFG++
Sbjct: 151 RGEIKLCDFGVS 162
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 90
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 144
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYV 173
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 430 IGKGGSSQVYKGCL--PDGKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G V++G P+ +AV I S+ V ++F+ E + H +I+ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
G E N + ++ + + G L L K + + A ++ AL YL S +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLES---K 510
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
R +HRD+ + N+L+S +L DFGL+++ S+ +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 547
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 71
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 125
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 71
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 125
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 446 GKELAVKILKPSEDVI---KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G+++A+K + + DV+ K + E++I+ H NII++ E ++ +V
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138
Query: 497 DFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNIL 556
D + L + +H ++ Y++ G L+Y+HS +VIHRD+K SN+L
Sbjct: 139 DLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRG----LKYMHSA---QVIHRDLKPSNLL 190
Query: 557 LSDDFEPQLSDFGLAKWASTSSS 579
++++ E ++ DFG+A+ TS +
Sbjct: 191 VNENCELKIGDFGMARGLCTSPA 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYV 173
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 430 IGKGGSSQVYK-GCLPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+G G V+K P G +A K++ KP+ + + + E++++ + I+ G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRNQIIRELQVLHECNSPYIVGFYG 98
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ D + + + + GSL++ L + P KV++ V + L YL +
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI----LGKVSIAVIKGLTYLRE--KHK 152
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HRDVK SNIL++ E +L DFG++
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYV 174
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 425 LAENLIGKGGSSQVYKGC--LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLH-HKNII 480
L E+++G+G ++V + C L +E AVKI++ I+ V E+E++ H+N++
Sbjct: 16 LQEDVLGEGAHARV-QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L+ F E++ LV++ + GS+ ++H + F E V VA AL++LH+
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHN- 129
Query: 541 SAQRVIHRDVKSSNILLS--DDFEP-QLSDFGLA 571
+ + HRD+K NIL + P ++ DFGL
Sbjct: 130 --KGIAHRDLKPENILCEHPNQVSPVKICDFGLG 161
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 415 QDLLSATSNFLAENLIGKGGSSQVYKGCLP--DGK--ELAVKILKP----SEDVIKEFVL 466
+D+L F ++GKG V + L DG ++AVK+LK S D I+EF+
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD-IEEFLR 74
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNL------LLVYDFLSRGSLEENLHGNK--KDPAAF 518
E + H ++ L+G +++ F+ G L L ++ ++P
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ + +A +EYL S++ IHRD+ + N +L++D ++DFGL++
Sbjct: 135 PLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 430 IGKGGSSQVYKGC--LPDGKELAVKI-LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
+G+G + VYKG L D +I L+ E + E+ ++ L H NI++L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 487 FEDNNLLLVYDFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+ +L LV+++L + L++ L GN + + V + + + L L Q+
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIIN--------MHNVKLFLFQLLRGLAYCHRQK 120
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSS 578
V+HRD+K N+L+++ E +L+DFGLA+ S +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKIL----KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
IG G VY + + + +A+K + K S + ++ + E+ + L H N I G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
++ LV ++ GS + L +KK E V G + L YLHS
Sbjct: 83 CYLREHTAWLVMEY-CLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHS---HN 135
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLA 571
+IHRDVK+ NILLS+ +L DFG A
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSA 162
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKELAVKIL------KPSEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ + + S KE + E ++ ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 109 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 164
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 165 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCL--PDGKELAVKILKPSEDVIKEFV---LEIEIITTLH 475
+ N+ + +GKG S V + C+ G E A KI+ + ++F E I L
Sbjct: 5 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NI+ L E++ LV+D ++ G L E++ + + ++ + E++
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESIA 119
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEP---QLSDFGLAKWASTSSSHITCTDVAGTFGY 592
Y HS ++HR++K N+LL+ + +L+DFGLA + S + AGT GY
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGY 173
Query: 593 V 593
+
Sbjct: 174 L 174
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 28/155 (18%)
Query: 449 LAVKILKPSEDVIKEFVL--EIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL- 504
+AVK+LKPS + + L E+++++ L +H NI++LLG C L++ ++ G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 505 ------EENLHGNKKDPAAFGW-----------SERYKVAMGVAEALEYLHSGSAQRVIH 547
++ +K PA S Y+VA G+A +++ IH
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-------ASKNCIH 191
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
RD+ + NILL+ ++ DFGLA+ S+++
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 449 LAVKI--LKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE 506
+AVKI +K + D + EI I L+H+N++ G E N L ++ S G L +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 507 NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ + P +++ GV YLH + HRD+K N+LL + ++S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 567 DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFGLA ++ + GT YV
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYV 173
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 33/170 (19%)
Query: 423 NFLAENLIGKGGSSQVYKGCLP-DGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIIS 481
+F LIG GG QV+K DGK +K +K + + + E++ + L H NI+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER---EVKALAKLDHVNIVH 68
Query: 482 LLGFCFEDNN-----------------LLLVYDFLSRGSLE---ENLHGNKKDPAAFGWS 521
G C++ + L + +F +G+LE E G K D
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL---- 123
Query: 522 ERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
++ + + ++Y+HS +++I+RD+K SNI L D + ++ DFGL
Sbjct: 124 -ALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 430 IGKGGSSQVYKGCLPD-GKELAVKILKP--SEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
+G GG V + D G+++A+K + S + + LEI+I+ L+H N++S
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 487 -----FEDNNL-LLVYDFLSRGSLE------ENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
N+L LL ++ G L EN G K+ P S+ ++ AL
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD-------ISSAL 135
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQ-----LSDFGLAKWASTSSSHITCTDVAGT 589
YLH R+IHRD+K NI+L PQ + D G AK CT+ GT
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQGE---LCTEFVGT 187
Query: 590 FGYVVL-ILNPIAFLFMFNCWFF 611
Y+ +L + + W F
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSF 210
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 428 NLIGKGGSSQVYKGC-LPDGKELAVKI-LKPSED-----VIKEFVLEIEIITTLHHKNII 480
++G G V+KG +P+G+ + + + +K ED + + I +L H +I+
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
LLG C ++L LV +L GSL +++ ++ A G + +A+ + YL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLEE- 133
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HR++ + N+LL + Q++DFG+A
Sbjct: 134 --HGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 394 LPKELEGLHEKYSATCR-LFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK 452
+P +EG K + R +++++D+L + +E ++ + +Q K +A K
Sbjct: 1 MPGAVEGPRWKQAEDIRDIYDFRDVLGTGA--FSEVILAEDKRTQKLVAI----KCIAKK 54
Query: 453 ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK 512
L+ E ++ EI ++ + H NI++L +L L+ +S G L + +
Sbjct: 55 ALEGKEGSMEN---EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---- 107
Query: 513 KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNIL---LSDDFEPQLSDFG 569
+ + + ++ V +A++YLH ++HRD+K N+L L +D + +SDFG
Sbjct: 108 VEKGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 570 LAKWASTSSSHITCTDVAGTFGYV---VLILNPIAFLFMFNCW 609
L+K S + GT GYV VL P + +CW
Sbjct: 165 LSKMEDPGS---VLSTACGTPGYVAPEVLAQKP--YSKAVDCW 202
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 428 NLIGKGGSSQVYKGC-LPDGKELAVKI-LKPSED-----VIKEFVLEIEIITTLHHKNII 480
++G G V+KG +P+G+ + + + +K ED + + I +L H +I+
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
LLG C ++L LV +L GSL +++ ++ A G + +A+ + YL
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLEE- 151
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
++HR++ + N+LL + Q++DFG+A
Sbjct: 152 --HGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 430 IGKGGSSQVYKGCLPD-GKELAVKILKP--SEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
+G GG V + D G+++A+K + S + + LEI+I+ L+H N++S
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 487 -----FEDNNL-LLVYDFLSRGSLE------ENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
N+L LL ++ G L EN G K+ P S+ ++ AL
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD-------ISSAL 134
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQ-----LSDFGLAKWASTSSSHITCTDVAGT 589
YLH R+IHRD+K NI+L PQ + D G AK CT+ GT
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPG--PQRLIHKIIDLGYAKELDQGE---LCTEFVGT 186
Query: 590 FGYVVL-ILNPIAFLFMFNCWFF 611
Y+ +L + + W F
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSF 209
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 139
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HRD+ + N +++ DF ++ DFG+ +
Sbjct: 140 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 25/157 (15%)
Query: 448 ELAVKILKPSE--DVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK + D + + E++I++ L H+NI++LLG C +L++ ++ G L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 505 -------EENLHG------------NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
E + G +K+D + + VA+ + +L S +
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNC 179
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
IHRDV + N+LL++ ++ DFGLA+ S++I
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 142
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HRD+ + N +++ DF ++ DFG+ +
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 142
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HRD+ + N +++ DF ++ DFG+ +
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITT--LHHKNIISLLGFCF 487
IGKG +V+ G G+++AVK+ +E+ + E EI T + H+NI LGF
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEA--SWFRETEIYQTVLMRHENI---LGFIA 98
Query: 488 ED-------NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
D L L+ D+ GSL + L D + K+A L +LH+
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTE 153
Query: 541 --SAQ---RVIHRDVKSSNILLSDDFEPQLSDFGLA 571
S Q + HRD+KS NIL+ + ++D GLA
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 141
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HRD+ + N +++ DF ++ DFG+ +
Sbjct: 142 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 28/155 (18%)
Query: 449 LAVKILKPSEDVIKEFVL--EIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL- 504
+AVK+LKPS + + L E+++++ L +H NI++LLG C L++ ++ G L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 505 ------EENLHGNKKDPAAFGW-----------SERYKVAMGVAEALEYLHSGSAQRVIH 547
++ +K PA S Y+VA G+A +L +++ IH
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL---ASKNCIH 168
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
RD+ + NILL+ ++ DFGLA+ S+++
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 446 GKELAVKIL-KP--SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDF-LSR 501
G+++A+K L +P SE K E+ ++ + H+N+I LL ++L YDF L
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
++ +L K F + + + + L+Y+HS V+HRD+K N+ +++D
Sbjct: 127 PFMQTDL--QKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDC 181
Query: 562 EPQLSDFGLAKWASTSSSHITCT 584
E ++ DFGLA+ A + T
Sbjct: 182 ELKILDFGLARHADAEMTGYVVT 204
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 28/155 (18%)
Query: 449 LAVKILKPSEDVIKEFVL--EIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL- 504
+AVK+LKPS + + L E+++++ L +H NI++LLG C L++ ++ G L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 505 ------EENLHGNKKDPAAFGW-----------SERYKVAMGVAEALEYLHSGSAQRVIH 547
++ +K PA S Y+VA G+A +L S + IH
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FLAS---KNCIH 184
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
RD+ + NILL+ ++ DFGLA+ S+++
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 142
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HRD+ + N +++ DF ++ DFG+ +
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 142
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HRD+ + N +++ DF ++ DFG+ +
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 407 ATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPD--GKELAVKIL---KPSEDVI 461
AT +F + + + ++GKG +V C G+E AVK++ + +
Sbjct: 35 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTD 93
Query: 462 KEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
KE +L E++++ L H NI+ L F + LV + + G L + + K+ F
Sbjct: 94 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSE 149
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTS 577
+ ++ V + Y+H +++HRD+K N+LL S D ++ DFGL+ S
Sbjct: 150 VDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 578 SSHITCTDVAGTFGYV 593
D GT Y+
Sbjct: 207 KK---MKDKIGTAYYI 219
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 407 ATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPD--GKELAVKIL---KPSEDVI 461
AT +F + + + ++GKG +V C G+E AVK++ + +
Sbjct: 34 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTD 92
Query: 462 KEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
KE +L E++++ L H NI+ L F + LV + + G L + + K+ F
Sbjct: 93 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSE 148
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTS 577
+ ++ V + Y+H +++HRD+K N+LL S D ++ DFGL+ S
Sbjct: 149 VDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 578 SSHITCTDVAGTFGYV 593
D GT Y+
Sbjct: 206 KK---MKDKIGTAYYI 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 77 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 132
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFG AK
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 77 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 132
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFG AK
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 407 ATCRLFNYQDLLSATSNFLAENLIGKGGSSQVY--KGCLPDGKELAVKIL---KPSEDVI 461
AT +F + + + ++GKG +V K + G+E AVK++ + +
Sbjct: 11 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTD 69
Query: 462 KEFVL-EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGW 520
KE +L E++++ L H NI+ L F + LV + + G L + + K+ F
Sbjct: 70 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSE 125
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTS 577
+ ++ V + Y+H +++HRD+K N+LL S D ++ DFGL+ S
Sbjct: 126 VDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 578 SSHITCTDVAGTFGYV 593
D GT Y+
Sbjct: 183 KK---MKDKIGTAYYI 195
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 28/155 (18%)
Query: 449 LAVKILKPSEDVIKEFVL--EIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL- 504
+AVK+LKPS + + L E+++++ L +H NI++LLG C L++ ++ G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 505 ------EENLHGNKKDPAAFGW-----------SERYKVAMGVAEALEYLHSGSAQRVIH 547
++ +K PA S Y+VA G+A +L +++ IH
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL---ASKNCIH 191
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
RD+ + NILL+ ++ DFGLA+ S+++
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++ G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 82 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 137
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 79 DNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 134
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFG AK
Sbjct: 135 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 169
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 82 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 137
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFG AK
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 172
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 28/155 (18%)
Query: 449 LAVKILKPSEDVIKEFVL--EIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL- 504
+AVK+LKPS + + L E+++++ L +H NI++LLG C L++ ++ G L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 505 ------EENLHGNKKDPAAFGW-----------SERYKVAMGVAEALEYLHSGSAQRVIH 547
++ +K PA S Y+VA G+A +L +++ IH
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA----FL---ASKNCIH 186
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
RD+ + NILL+ ++ DFGLA+ S+++
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 446 GKELAVKIL-KP--SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDF-LSR 501
G+++A+K L +P SE K E+ ++ + H+N+I LL ++L YDF L
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
++ +L K F + + + + L+Y+HS V+HRD+K N+ +++D
Sbjct: 109 PFMQTDL--QKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDC 163
Query: 562 EPQLSDFGLAKWASTSSSHITCT 584
E ++ DFGLA+ A + T
Sbjct: 164 ELKILDFGLARHADAEMTGYVVT 186
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++ G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 82 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 137
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 138 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 77 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 132
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFG AK
Sbjct: 133 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGK----ELAVKILKP--SEDVIKEFVLEIEIITT 473
A + + ++G+G +VY+G + K +AVK K + D ++F+ E I+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEA 533
L H +I+ L+G E+ ++ + G L L NK ++ + +A
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKA 137
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKW 573
+ YL S + +HRD+ NIL++ +L DFGL+++
Sbjct: 138 MAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRY 174
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++G G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 130
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFG AK
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 165
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCLPD--GKELAVKIL---KPSEDVIKEFVL-EIEIITTL 474
+ + + ++GKG +V C G+E AVK++ + + KE +L E++++ L
Sbjct: 31 SDRYKGQRVLGKGSFGEVIL-CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI+ L F + LV + + G L + + K+ F + ++ V +
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGI 145
Query: 535 EYLHSGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFG 591
Y+H +++HRD+K N+LL S D ++ DFGL+ S D GT
Sbjct: 146 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAY 199
Query: 592 YV 593
Y+
Sbjct: 200 YI 201
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGK----ELAVKILKP--SEDVIKEFVLEIEIITT 473
A + + ++G+G +VY+G + K +AVK K + D ++F+ E I+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEA 533
L H +I+ L+G E+ ++ + G L L NK ++ + +A
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKA 121
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ YL S + +HRD+ NIL++ +L DFGL+++ +
Sbjct: 122 MAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 165
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKEL----AVKILKP--SEDVIKEFVLEIEIITTL 474
+ F ++ G VYKG +P+G+++ A+K L+ S KE + E ++ ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
+ ++ LLG C + + L+ + G L + + +K + G + +A+ +
Sbjct: 75 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDN---IGSQYLLNWCVQIAKGM 130
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
YL +R++HRD+ + N+L+ +++DFGLAK
Sbjct: 131 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGK----ELAVKILKP--SEDVIKEFVLEIEIITT 473
A + + ++G+G +VY+G + K +AVK K + D ++F+ E I+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEA 533
L H +I+ L+G E+ ++ + G L L NK ++ + +A
Sbjct: 70 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKA 125
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKW 573
+ YL S + +HRD+ NIL++ +L DFGL+++
Sbjct: 126 MAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRY 162
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 427 ENL--IGKGGSSQVYKGCL-PDGKELAVKILKPS--EDVIKEFVLEIEIITTLHH-KNII 480
ENL +G G QV+K G +AVK ++ S ++ K +++++++ H I+
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY--KVAMGVAEALEYLH 538
G + ++ + + + G+ E L + P ER K+ + + +AL YL
Sbjct: 88 QCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIP----ERILGKMTVAIVKALYYLK 141
Query: 539 SGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
VIHRDVK SNILL + + +L DFG++
Sbjct: 142 EKHG--VIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 430 IGKGGSSQVYKGCLPDGKELA----VKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
IG+G V+K + E+ V++ E V + EI ++ L HKNI+ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 486 CFEDNNLLLVYDFLSRG--SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
D L LV++F + ++ +G+ DP + + L + HS +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVK-----SFLFQLLKGLGFCHS---R 120
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
V+HRD+K N+L++ + E +L+DFGLA+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKEL-AVKILKP----SEDVIKEFVLEIEIITTL 474
NF ++GKG +V + + +L AVK+LK +D ++ + E I++
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 475 HHKNIISLLGFCFED-NNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEA 533
+ ++ L CF+ + L V +F++ G L ++ +++ F + A + A
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISA 136
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
L +LH + +I+RD+K N+LL + +L+DFG+ K + +T GT Y+
Sbjct: 137 LMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYI 191
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EI ++ + H NI++L +L L+ +S G L + + + + + ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRL 121
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNIL---LSDDFEPQLSDFGLAKWASTSSSHITC 583
V +A++YLH ++HRD+K N+L L +D + +SDFGL+K S
Sbjct: 122 IFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VL 175
Query: 584 TDVAGTFGYV---VLILNPIAFLFMFNCW 609
+ GT GYV VL P + +CW
Sbjct: 176 STACGTPGYVAPEVLAQKP--YSKAVDCW 202
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 419 SATSNFLAENLIGKGGSSQVYKGC--LPDGKELAVKIL---KPSEDVIKEFVLEIEIITT 473
S T + IGKG S V + C L G E A KI+ K S ++ E I
Sbjct: 1 SMTDEYQLYEDIGKGAFS-VVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRL 59
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEA 533
L H NI+ L E+ LV+D ++ G L E D A + + + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE-------DIVAREYYSEADASHCIQQI 112
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEP---QLSDFGLAKWASTSSSHITCTDVAGTF 590
LE + V+HRD+K N+LL+ + +L+DFGLA AGT
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTP 170
Query: 591 GYV 593
GY+
Sbjct: 171 GYL 173
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 12/136 (8%)
Query: 425 LAENLIGKGGSSQVYKGC--LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLH-HKNII 480
L E+++G+G ++V + C L +E AVKI++ I+ V E+E++ H+N++
Sbjct: 16 LQEDVLGEGAHARV-QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
L+ F E++ LV++ + GS+ ++H + F E V VA AL++LH+
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHN- 129
Query: 541 SAQRVIHRDVKSSNIL 556
+ + HRD+K NIL
Sbjct: 130 --KGIAHRDLKPENIL 143
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EI ++ + H NI++L +L L+ +S G L + + + + + ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRL 121
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNIL---LSDDFEPQLSDFGLAKWASTSSSHITC 583
V +A++YLH ++HRD+K N+L L +D + +SDFGL+K S
Sbjct: 122 IFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VL 175
Query: 584 TDVAGTFGYV---VLILNPIAFLFMFNCW 609
+ GT GYV VL P + +CW
Sbjct: 176 STACGTPGYVAPEVLAQKP--YSKAVDCW 202
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 429 LIGKGGSSQVYK----GCLPDGKELAVKILKPSEDV-----IKEFVLEIEIITTLHHKNI 479
++GKGG +V++ GK A+K+LK + V E I+ + H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 480 ISLLGFCFEDN-NLLLVYDFLSRGSLEENLHGN---KKDPAAFGWSERYKVAMGVAEALE 535
+ L+ + F+ L L+ ++LS G L L +D A F +E ++ AL
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE-------ISMALG 135
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
+LH + +I+RD+K NI+L+ +L+DFGL K S +T T GT Y+
Sbjct: 136 HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHT-FCGTIEYM 188
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKILKPSE--DVIKEFVLEIEIITTLHHKNIISLLGFC 486
IG GG ++V C + G+ +A+KI+ + + EIE + L H++I L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVI 546
N + +V ++ G L + + + E V + A+ Y+HS Q
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHS---QGYA 130
Query: 547 HRDVKSSNILLSDDFEPQLSDFGL-AKWASTSSSHI-TCTDVAGTFGY 592
HRD+K N+L + + +L DFGL AK H+ TC G+ Y
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC---CGSLAY 175
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EI ++ + H NI++L +L L+ +S G L + + + + + ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRL 121
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNIL---LSDDFEPQLSDFGLAKWASTSSSHITC 583
V +A++YLH ++HRD+K N+L L +D + +SDFGL+K S
Sbjct: 122 IFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VL 175
Query: 584 TDVAGTFGYV---VLILNPIAFLFMFNCW 609
+ GT GYV VL P + +CW
Sbjct: 176 STACGTPGYVAPEVLAQKP--YSKAVDCW 202
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 143
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HR++ + N +++ DF ++ DFG+ +
Sbjct: 144 MAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 410 RLFNYQDLLSATSNFLAENLIGKGGSSQVYK-GCLPDGKELAVKILKPSEDVIKEFVLEI 468
++F +++ L T F L + + +++ C+P K LK E I+ EI
Sbjct: 22 KIFEFKETL-GTGAFSEVVLAEEKATGKLFAVKCIPK------KALKGKESSIEN---EI 71
Query: 469 EIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM 528
++ + H+NI++L N+L LV +S G L + + + + + +
Sbjct: 72 AVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI----VEKGFYTEKDASTLIR 127
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNIL-LSDDFEPQ--LSDFGLAKWASTSSSHITCTD 585
V +A+ YLH ++HRD+K N+L S D E + +SDFGL+K +
Sbjct: 128 QVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMST 181
Query: 586 VAGTFGYV---VLILNPIAFLFMFNCW 609
GT GYV VL P + +CW
Sbjct: 182 ACGTPGYVAPEVLAQKP--YSKAVDCW 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 430 IGKGGSSQVYKGCLP--DGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+GKG S V + C+ G+E A KI+ K S ++ E I L H NI+ L
Sbjct: 30 LGKGAFS-VVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
E+ + L++D ++ G L E++ A + + + + LE +
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDI-------VAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 545 VIHRDVKSSNILLSDDFEP---QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
V+HRD+K N+LL+ + +L+DFGLA AGT GY+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYL 191
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 25/157 (15%)
Query: 448 ELAVKILKPSEDVIKEFVL--EIEIITTL-HHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
++AVK+LK D + L E++++T L H+NI++LLG C + L++++ G L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 505 -------------EENLHGNKK------DPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+E + N+K D + + A VA+ +E+L S
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC--- 193
Query: 546 IHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHIT 582
+HRD+ + N+L++ ++ DFGLA+ + S+++
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV 230
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSEDVIKEFVL----EIEIITTLH 475
+S+F ++L+G+G V P G+ +A+K ++P + + F L EI+I+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL--FALRTLREIKILKHFK 67
Query: 476 HKNIISLLGF----CFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVA 531
H+NII++ FE+ N + + L ++ +LH +Y + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQEL----MQTDLHRVISTQMLSDDHIQYFIYQTL- 122
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSS 579
A++ LH + VIHRD+K SN+L++ + + ++ DFGLA+ S++
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 430 IGKGGSSQVYKGCLPD------GKELAVKILKPSEDVIK--EFVLEIEIITTLHHKNIIS 481
+G+G VY+G D +AVK + S + + EF+ E ++ +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 482 LLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--------KDPAAFGWSERYKVAMGVAEA 533
LLG + L+V + ++ G L+ L + + P E ++A +A+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADG 142
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ YL +A++ +HR++ + N +++ DF ++ DFG+ +
Sbjct: 143 MAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 399 EGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDG--KELAVKIL-- 454
E L+ + ATC F T ++ +GKG S V + C+ +E A KI+
Sbjct: 16 ENLYFQXMATCTRF--------TDDYQLFEELGKGAFS-VVRRCVKKTPTQEYAAKIINT 66
Query: 455 -KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKK 513
K S ++ E I L H NI+ L E+ LV+D ++ G L E++
Sbjct: 67 KKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI----- 121
Query: 514 DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEP---QLSDFGL 570
A + + + + LE ++ ++HRD+K N+LL+ + +L+DFGL
Sbjct: 122 --VAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGL 179
Query: 571 AKWASTSSSHITCTDVAGTFGYV 593
A AGT GY+
Sbjct: 180 A--IEVQGEQQAWFGFAGTPGYL 200
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSEDVIKEFVL----EIEIITTLH 475
+S+F ++L+G+G V P G+ +A+K ++P + + F L EI+I+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL--FALRTLREIKILKHFK 67
Query: 476 HKNIISLLGF----CFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVA 531
H+NII++ FE+ N + + L ++ +LH +Y + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQEL----MQTDLHRVISTQMLSDDHIQYFIYQTL- 122
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSS 579
A++ LH + VIHRD+K SN+L++ + + ++ DFGLA+ S++
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 30/180 (16%)
Query: 429 LIGKGGSSQVYK----GCLPDGKELAVKILKPSEDV-----IKEFVLEIEIITTLHHKNI 479
++GKGG +V++ GK A+K+LK + V E I+ + H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 480 ISLLGFCFEDN-NLLLVYDFLSRGSLEENLHGN---KKDPAAFGWSERYKVAMGVAEALE 535
+ L+ + F+ L L+ ++LS G L L +D A F +E ++ AL
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE-------ISMALG 135
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA--STSSSHITCTDVAGTFGYV 593
+LH + +I+RD+K NI+L+ +L+DFGL K + + +H C GT Y+
Sbjct: 136 HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC----GTIEYM 188
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
Query: 421 TSNFLAENLIGKGGSSQVYKGCL-PDGKELAVKILKPSEDVIKEFVL----EIEIITTLH 475
+S+F ++L+G+G V P G+ +A+K ++P + + F L EI+I+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL--FALRTLREIKILKHFK 67
Query: 476 HKNIISLLGF----CFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVA 531
H+NII++ FE+ N + + L ++ +LH +Y + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQEL----MQTDLHRVISTQMLSDDHIQYFIYQTL- 122
Query: 532 EALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSS 579
A++ LH + VIHRD+K SN+L++ + + ++ DFGLA+ S++
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 446 GKELAVKIL-KP--SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRG 502
G ++A+K L +P SE K E+ ++ + H+N+I LL D L DF
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
G G + + + L Y+H+ +IHRD+K N+ +++D E
Sbjct: 110 PFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCE 166
Query: 563 PQLSDFGLAKWASTSSSHITCTDVAGTFGYVVLILNPIAFLFMFNCW 609
++ DFGLA+ A S + V + +ILN + + + W
Sbjct: 167 LKILDFGLARQA---DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIW 210
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 467 EIEIITTLHHKNIISLLGFCF--EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY 524
EI+++ L HKN+I L+ + E + +V ++ G ++E L + F + +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE--KRFPVCQAH 112
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT 584
+ + LEYLHS Q ++H+D+K N+LL+ ++S G+A+ ++ TC
Sbjct: 113 GYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 585 DVAGT 589
G+
Sbjct: 170 TSQGS 174
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 23/162 (14%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKEL-AVKILKPSEDVIKEFVLEIEIITTLHHKNII 480
+F+ ++GKG +V+ + A+K LK +DV+ +++ ++ T+ K ++
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK--KDVV---LMDDDVECTMVEKRVL 71
Query: 481 SLLG--------FC-FE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGV 530
SL FC F+ NL V ++L+ G L ++ K F S A +
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEI 127
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
L++LHS +++RD+K NILL D +++DFG+ K
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 53 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 107
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 108 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 158
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ + Q++DFG AK
Sbjct: 159 LLIDEQGYIQVTDFGFAK 176
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 430 IGKGGSSQVYKGC-LPDGKELA----VKILKPSEDVIKEFVLEIEII---TTLHHKNIIS 481
IG+G +V+K L +G V++ E + + E+ ++ T H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 482 LLGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM-GVAEALE 535
L C + L LV++ + + L L K P +E K M + L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGY 592
+LHS RV+HRD+K NIL++ + +L+DFGLA+ S + T V T Y
Sbjct: 135 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWY 185
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 87 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 142 EYVAGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 192
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 193 LLIDQQGYIQVTDFGFAK 210
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 87 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 142 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 192
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 193 LLIDQQGYIQVTDFGFAK 210
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 33/174 (18%)
Query: 419 SATSN--FLAENLIGKGGSSQVYKG-CLPDGKELAVKI------LKPSEDVIKEFVLEIE 469
+TSN +L +++G+G ++ V++G G A+K+ L+P + ++EF E
Sbjct: 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF----E 59
Query: 470 IITTLHHKNIISLLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPA-AFGW--SE 522
++ L+HKNI+ L F E+ +L+ +F GSL L ++P+ A+G SE
Sbjct: 60 VLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVL----EEPSNAYGLPESE 113
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNIL--LSDDFEP--QLSDFGLAK 572
V V + +L ++HR++K NI+ + +D + +L+DFG A+
Sbjct: 114 FLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 31/164 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK------WASTSSSHITCTDVAGTFGY 592
+L+ Q++DFG AK W + ++ + GY
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGY 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 46/183 (25%)
Query: 423 NFLAENLIGKGGSSQVYKGCLP-DGKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIIS 481
+F LIG GG QV+K DGK ++ +K + + + E++ + L H NI+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER---EVKALAKLDHVNIVH 69
Query: 482 LLGFCFEDNN------------------------------LLLVYDFLSRGSLE---ENL 508
G C++ + L + +F +G+LE E
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 509 HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDF 568
G K D ++ + + ++Y+HS +++IHRD+K SNI L D + ++ DF
Sbjct: 129 RGEKLDKVL-----ALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 569 GLA 571
GL
Sbjct: 181 GLV 183
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 430 IGKGGSSQVYKGC-LPDGKELA----VKILKPSEDVIKEFVLEIEII---TTLHHKNIIS 481
IG+G +V+K L +G V++ E + + E+ ++ T H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 482 LLGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM-GVAEALE 535
L C + L LV++ + + L L K P +E K M + L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGY 592
+LHS RV+HRD+K NIL++ + +L+DFGLA+ S + T V T Y
Sbjct: 135 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWY 185
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 173 LLIDQQGYIQVTDFGFAK 190
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 429 LIGKGGSSQVYKGCLP--DGKELAVKILKPSEDVIKE---FVLEIEIITTLHHKNIISLL 483
++GKG +V K C +E AVK++ + K+ + E+E++ L H NI+ L
Sbjct: 29 MLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
+ ++ +V + + G L + + K+ F + ++ V + Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHK---H 140
Query: 544 RVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++HRD+K NILL D + ++ DFGL ++ + D GT Y+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGL---STCFQQNTKMKDRIGTAYYI 190
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 33/174 (18%)
Query: 419 SATSN--FLAENLIGKGGSSQVYKG-CLPDGKELAVKI------LKPSEDVIKEFVLEIE 469
+TSN +L +++G+G ++ V++G G A+K+ L+P + ++EF E
Sbjct: 4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF----E 59
Query: 470 IITTLHHKNIISLLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPA-AFGW--SE 522
++ L+HKNI+ L F E+ +L+ +F GSL L ++P+ A+G SE
Sbjct: 60 VLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVL----EEPSNAYGLPESE 113
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNIL--LSDDFEP--QLSDFGLAK 572
V V + +L ++HR++K NI+ + +D + +L+DFG A+
Sbjct: 114 FLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 61 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 115
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 116 EYVAGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 166
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 167 LLIDQQGYIQVTDFGFAK 184
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFAEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + EIE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKEIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ Q++DFGLAK
Sbjct: 172 LMIDQQGYIQVTDFGLAK 189
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 430 IGKGGSSQVYKGC-LPDGKELA----VKILKPSEDVIKEFVLEIEII---TTLHHKNIIS 481
IG+G +V+K L +G V++ E + + E+ ++ T H N++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 482 LLGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM-GVAEALE 535
L C + L LV++ + + L L K P +E K M + L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGY 592
+LHS RV+HRD+K NIL++ + +L+DFGLA+ S + T V T Y
Sbjct: 135 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWY 185
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKEL-AVKILKP----SEDVIKEFVLEIEIITTLHHK 477
NFL ++GKG +V +EL A+KILK +D ++ ++E ++ L
Sbjct: 22 NFLM--VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 478 NIISLLGFCFED-NNLLLVYDFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEAL 534
++ L CF+ + L V ++++ G L ++ G K+P A + A ++ L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY------AAEISIGL 133
Query: 535 EYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
+LH + +I+RD+K N++L + +++DFG+ K +T + GT Y+
Sbjct: 134 FFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTREFCGTPDYI 187
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 429 LIGKGGSSQVYKGCLP--DGKELAVKILKPSEDVIKE---FVLEIEIITTLHHKNIISLL 483
++GKG +V K C +E AVK++ + K+ + E+E++ L H NI+ L
Sbjct: 29 MLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
+ ++ +V + + G L + + K+ F + ++ V + Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHK---H 140
Query: 544 RVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++HRD+K NILL D + ++ DFGL ++ + D GT Y+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGL---STCFQQNTKMKDRIGTAYYI 190
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 423 NFLAENLIGKGGSSQVY--KGCLPDGKELAVKILKPSEDVIKEFVLE--IEIITTLHHKN 478
F+ ++G G S+V+ K L GK A+K +K S ++ LE I ++ + H+N
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKS-PAFRDSSLENEIAVLKKIKHEN 67
Query: 479 IISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
I++L + LV +S G L + + + + + V V A++YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRI----LERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 539 SGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV-- 593
++HRD+K N+L ++ + ++DFGL+K C GT GYV
Sbjct: 124 ENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC----GTPGYVAP 176
Query: 594 -VLILNPIAFLFMFNCW 609
VL P + +CW
Sbjct: 177 EVLAQKP--YSKAVDCW 191
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 429 LIGKGGSSQVYKGCLP--DGKELAVKILKPSEDVIKE---FVLEIEIITTLHHKNIISLL 483
++GKG +V K C +E AVK++ + K+ + E+E++ L H NI+ L
Sbjct: 29 MLGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
+ ++ +V + + G L + + K+ F + ++ V + Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHK---H 140
Query: 544 RVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++HRD+K NILL D + ++ DFGL ++ + D GT Y+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGL---STCFQQNTKMKDRIGTAYYI 190
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KIL+ ++D + V E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 33 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTALKYAFQTHDRLCFVMEYAN 91
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + ++ A F +E + ALEYLHS + V++RD+K N++L
Sbjct: 92 GGELFFHLSRERVFTEERARFYGAE-------IVSALEYLHS---RDVVYRDIKLENLML 141
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 142 DKDGHIKITDFGLCK 156
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 430 IGKGGSSQVYKGCLPDGKELA----VKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
IG+G V+K + E+ V++ E V + EI ++ L HKNI+ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 486 CFEDNNLLLVYDFLSRG--SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
D L LV++F + ++ +G+ DP + + L + HS +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVK-----SFLFQLLKGLGFCHS---R 120
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
V+HRD+K N+L++ + E +L++FGLA+
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 72/181 (39%), Gaps = 22/181 (12%)
Query: 417 LLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIITTLHH 476
LL N +E I SQ KG D K E +E EI ++ +L H
Sbjct: 53 LLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN-------KNIEKFHEEIYNEISLLKSLDH 105
Query: 477 KNIISLLGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
NII L FED LV +F G L E + K F + + + +
Sbjct: 106 PNIIKLFD-VFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSGIC 160
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDD---FEPQLSDFGLAKWASTSSSHITCTDVAGTFGY 592
YLH ++HRD+K NILL + ++ DFGL +S S D GT Y
Sbjct: 161 YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGL---SSFFSKDYKLRDRLGTAYY 214
Query: 593 V 593
+
Sbjct: 215 I 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KIL+ ++D + V E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTALKYAFQTHDRLCFVMEYAN 88
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + ++ A F +E + ALEYLHS + V++RD+K N++L
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAE-------IVSALEYLHS---RDVVYRDIKLENLML 138
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 139 DKDGHIKITDFGLCK 153
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 421 TSNFLAENLIGKGGSSQVY--KGCLPDGKELAVKIL---KPSEDVIKEFVL-EIEIITTL 474
+ + + ++GKG +V K + G+E AVK++ + + KE +L E++++ L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 475 HHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEAL 534
H NI L F + LV + + G L + + K+ F + ++ V +
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGI 139
Query: 535 EYLHSGSAQRVIHRDVKSSNILL---SDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFG 591
Y H +++HRD+K N+LL S D ++ DFGL+ S D GT
Sbjct: 140 TYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---XKDKIGTAY 193
Query: 592 YV 593
Y+
Sbjct: 194 YI 195
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KIL+ ++D + V E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTALKYAFQTHDRLCFVMEYAN 88
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + ++ A F +E + ALEYLHS + V++RD+K N++L
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAE-------IVSALEYLHS---RDVVYRDIKLENLML 138
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 139 DKDGHIKITDFGLCK 153
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 173 LLIDQQGYIQVTDFGFAK 190
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 87 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 142 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 192
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 193 LLIDQQGYIQVTDFGFAK 210
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ Q++DFG AK
Sbjct: 172 LIIDQQGYIQVTDFGFAK 189
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 173 LLIDQQGYIQVTDFGFAK 190
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KIL+ ++D + V E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTALKYAFQTHDRLCFVMEYAN 88
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + ++ A F +E + ALEYLHS + V++RD+K N++L
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAE-------IVSALEYLHS---RDVVYRDIKLENLML 138
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 139 DKDGHIKITDFGLCK 153
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KIL+ ++D + V E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTALKYAFQTHDRLCFVMEYAN 88
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + ++ A F +E + ALEYLHS + V++RD+K N++L
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAE-------IVSALEYLHS---RDVVYRDIKLENLML 138
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 139 DKDGHIKITDFGLCK 153
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 59 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 113
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 114 EYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 164
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 165 LLIDQQGYIQVTDFGFAK 182
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 173 LLIDQQGYIQVTDFGFAK 190
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 173 LLIDQQGYIQVTDFGFAK 190
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 173 LLIDQQGYIQVTDFGFAK 190
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYVPGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 173 LLIDQQGYIQVTDFGFAK 190
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 59 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 113
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 114 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 164
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 165 LLIDQQGYIQVTDFGFAK 182
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF--------CFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ + F F+DN NL +V
Sbjct: 66 GNHFAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 52 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 106
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 107 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 157
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 158 LLIDQQGYIQVTDFGFAK 175
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKE------FVLEIEIITTLHHKNIIS 481
++G GG S+V+ L D +++AVK+L+ D+ ++ F E + L+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 482 LLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+ + +V +++ +L + +H G + +A+A + L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQAL 129
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT-DVAGTFGYV 593
+ +IHRDVK +NI++S ++ DFG+A+ + S + +T T V GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF--------CFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ + F F+DN NL +V
Sbjct: 66 GNHFAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGF--------CFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ + F F+DN NL +V
Sbjct: 66 GNHFAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ Q++DFG AK
Sbjct: 172 LLIDQQGYIQVTDFGFAK 189
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKXQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDXELKILDFGLAR 173
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKE------FVLEIEIITTLHHKNIIS 481
++G GG S+V+ L D +++AVK+L+ D+ ++ F E + L+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 482 LLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+ + +V +++ +L + +H G + +A+A + L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQAL 129
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT-DVAGTFGYV 593
+ +IHRDVK +NI++S ++ DFG+A+ + S + +T T V GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KIL+ ++D + V E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 35 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTALKYAFQTHDRLCFVMEYAN 93
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + ++ A F +E + ALEYLHS + V++RD+K N++L
Sbjct: 94 GGELFFHLSRERVFTEERARFYGAE-------IVSALEYLHS---RDVVYRDIKLENLML 143
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 144 DKDGHIKITDFGLCK 158
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKE-LAVKILK---PSEDVIKEFVLEIEIITTLHHKNIISLLGF 485
+G+G +VYK E +A+K ++ E V + E+ ++ L H+NII L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 486 CFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
++ L L++++ + L++ + N S Y++ GV + HS +R
Sbjct: 102 IHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGV----NFCHS---RRC 153
Query: 546 IHRDVKSSNILL--SDDFEP---QLSDFGLAK 572
+HRD+K N+LL SD E ++ DFGLA+
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KIL+ ++D + V E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP-FLTALKYAFQTHDRLCFVMEYAN 88
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + ++ A F +E + ALEYLHS + V++RD+K N++L
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAE-------IVSALEYLHS---RDVVYRDIKLENLML 138
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 139 DKDGHIKITDFGLCK 153
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L KP + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 119 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 166
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 167 NLAVNEDCELKILDFGLAR 185
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KILK ++D + + E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 173 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYAN 231
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + +D A F +E + AL+YLHS + V++RD+K N++L
Sbjct: 232 GGELFFHLSRERVFSEDRARFYGAE-------IVSALDYLHS--EKNVVYRDLKLENLML 282
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 283 DKDGHIKITDFGLCK 297
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 23/162 (14%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKEL-AVKILKPSEDVIKEFVLEIEIITTLHHKNII 480
+F ++GKG +V+ + A+K LK +DV+ +++ ++ T+ K ++
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK--KDVV---LMDDDVECTMVEKRVL 72
Query: 481 SLLG--------FC-FE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGV 530
SL FC F+ NL V ++L+ G L ++ K F S A +
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEI 128
Query: 531 AEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
L++LHS +++RD+K NILL D +++DFG+ K
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 446 GKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
G A K ++ P E + EI+ ++ L H +++L +DN ++++Y+F+S G L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 505 EENL---HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
E + H + A + + V + L ++H + +H D+K NI+ +
Sbjct: 242 FEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMHENN---YVHLDLKPENIMFTTKR 292
Query: 562 --EPQLSDFGLA 571
E +L DFGL
Sbjct: 293 SNELKLIDFGLT 304
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 422 SNFLAENLIGKGGSSQVY--KGCLPDGKELAVKILKPSEDVIKEFVL-EIEIITTLHHKN 478
++F +G+GG V+ K + D +I P+ ++ +E V+ E++ + L H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 479 IISLLGFCFEDNNL-------LLVYDFLS-RGSLEENLHGNKKDPAAFGWSER---YKVA 527
I+ E N VY ++ + +ENL ER +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 528 MGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ +AEA+E+LHS ++HRD+K SNI + D ++ DFGL
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLV 165
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 103 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 150
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 151 NLAVNEDCELKILDFGLAR 169
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G ++AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT 135
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 136 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 183
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 184 NLAVNEDCELKILDFGLAR 202
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 127 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 174
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 175 NLAVNEDCELKILDFGLAR 193
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 41/175 (23%)
Query: 447 KELAVKILKPSEDVIKE----------FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVY 496
KE+ VK +K E V+++ LEI I++ + H NII +L FE+
Sbjct: 50 KEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI-FENQGFF--- 104
Query: 497 DFLSRGSLEENLHGNKKDPAAFGWSERYK---------VAMGVAEALEYLHSGSAQRVIH 547
L HG+ D F + +R+ + + A+ YL + +IH
Sbjct: 105 ------QLVMEKHGSGLD--LFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIH 153
Query: 548 RDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV---VLILNP 599
RD+K NI++++DF +L DFG A + T GT Y VL+ NP
Sbjct: 154 RDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVLMGNP 205
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 127 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 174
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 175 NLAVNEDCELKILDFGLAR 193
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 103 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 150
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 151 NLAVNEDCELKILDFGLAR 169
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KILK ++D + + E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 34 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYAN 92
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + +D A F +E + AL+YLHS + V++RD+K N++L
Sbjct: 93 GGELFFHLSRERVFSEDRARFYGAE-------IVSALDYLHS--EKNVVYRDLKLENLML 143
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 144 DKDGHIKITDFGLCK 158
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKXQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 116
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 117 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 164
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 165 NLAVNEDCELKILDFGLAR 183
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KILK ++D + + E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 176 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYAN 234
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + +D A F +E + AL+YLHS + V++RD+K N++L
Sbjct: 235 GGELFFHLSRERVFSEDRARFYGAE-------IVSALDYLHS--EKNVVYRDLKLENLML 285
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 286 DKDGHIKITDFGLCK 300
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 126 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 173
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 174 NLAVNEDCELKILDFGLAR 192
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KILK ++D + + E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 33 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYAN 91
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + +D A F +E + AL+YLHS + V++RD+K N++L
Sbjct: 92 GGELFFHLSRERVFSEDRARFYGAE-------IVSALDYLHS--EKNVVYRDLKLENLML 142
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 143 DKDGHIKITDFGLCK 157
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + EIE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKEIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ +++DFGLAK
Sbjct: 172 LMIDQQGYIKVTDFGLAK 189
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 446 GKELAVKILKP----SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLS 500
G+ A+KILK ++D + + E ++ H ++ L + F+ ++ L V ++ +
Sbjct: 35 GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYAN 93
Query: 501 RGSLEENLHGNK---KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL 557
G L +L + +D A F +E + AL+YLHS + V++RD+K N++L
Sbjct: 94 GGELFFHLSRERVFSEDRARFYGAE-------IVSALDYLHS--EKNVVYRDLKLENLML 144
Query: 558 SDDFEPQLSDFGLAK 572
D +++DFGL K
Sbjct: 145 DKDGHIKITDFGLCK 159
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 446 GKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
G A K ++ P E + EI+ ++ L H +++L +DN ++++Y+F+S G L
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
Query: 505 EENL---HGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
E + H + A + + V + L ++H + +H D+K NI+ +
Sbjct: 136 FEKVADEHNKMSEDEAVEYMRQ------VCKGLCHMHENN---YVHLDLKPENIMFTTKR 186
Query: 562 --EPQLSDFGLA 571
E +L DFGL
Sbjct: 187 SNELKLIDFGLT 198
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 169
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 170 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 118 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 165
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 166 NLAVNEDXELKILDFGLAR 184
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 414 YQDLLSATSNFLAENLIGKGGSSQVYKGC--LPDGKE--LAVKILKPSEDVIKEFVLEIE 469
Y+ + ++ F E+ IG+G S VY L G E +A+K L P+ I+ E++
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR-IAAELQ 71
Query: 470 IITTLHHKNIISLLGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAM 528
+T ++ + + +CF N+ +++ +L S + L+ + + E + +
Sbjct: 72 CLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN-------SLSFQEVREYML 124
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ +AL+ +H ++HRDVK SN L + + L DFGLA+
Sbjct: 125 NLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 175
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 175
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 113 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 160
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 161 NLAVNEDCELKILDFGLAR 179
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 112 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 159
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 160 NLAVNEDXELKILDFGLAR 178
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 112 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 159
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 160 NLAVNEDXELKILDFGLAR 178
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 32 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 146
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 147 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 65 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 179
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 180 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDG-KELAVK-ILKPSEDVI--KEFVLEIEIITTLHHKN 478
N++ ++LIG+G VY + K +A+K + + ED+I K + EI I+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 479 IISLLGFCFEDNNLLLVYD--FLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
II L D+ LL +D ++ + +L K P + + +
Sbjct: 87 IIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+H +IHRD+K +N LL+ D ++ DFGLA+
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 63 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 177
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 178 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 46 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 160
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 153
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYMPGGDMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ +++DFG AK
Sbjct: 172 LLIDQQGYIKVADFGFAK 189
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 422 SNFLAENLIGKGGSSQVY---KGCLPD-GKELAVKILKPSEDVIKEFVLEI-----EIIT 472
NF ++G G +V+ K D GK A+K+LK + V K E +++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 473 TLHHKNIISLLGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVA 531
+ + L + F+ + L L+ D+++ G L +L ++ ++E ++V + V
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER------FTE-HEVQIYVG 166
Query: 532 E---ALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAG 588
E ALE+LH +I+RD+K NILL + L+DFGL+K + D G
Sbjct: 167 EIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCG 222
Query: 589 TFGYV 593
T Y+
Sbjct: 223 TIEYM 227
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYMPGGDMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ +++DFG AK
Sbjct: 172 LLIDQQGYIKVADFGFAK 189
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 33/233 (14%)
Query: 347 ANSDVKQITYDPGDNESINLNGDSGA---IVPVGNEIVSSPLSTDHDSTEL-PKELEGLH 402
N ++++P + E D G +P+ E+ SP + D E+ PKE+
Sbjct: 311 GNRQESTVSFNPYEPELAPWAADKGPQREALPMDTEVFESPFA---DPEEIRPKEV---- 363
Query: 403 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSED--- 459
+L +D + NF G + Y K +AVKILK +
Sbjct: 364 ---YLDRKLLTLEDKELGSGNF--------GTVKKGYYQMKKVVKTVAVKILKNEANDPA 412
Query: 460 VIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFG 519
+ E + E ++ L + I+ ++G C E + +LV + G L + L N+
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 471
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 472 IELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 517
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLXGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 114 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 161
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 162 NLAVNEDCELKILDFGLAR 180
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGF-----CFEDNNLLLVYD 497
G +AVK L +P + +I K E+ ++ + H+N+I LL E+ N + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 498 FLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNI 555
L L + K D F + + L+Y+HS +IHRD+K SN+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPSNL 156
Query: 556 LLSDDFEPQLSDFGLAK 572
+++D E ++ DFGLA+
Sbjct: 157 AVNEDCELKILDFGLAR 173
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 220
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 221 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 396 KELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQV----YKGCLPDGKELAV 451
K ++ +Y T +DL ++ +IG+G +V +K K A+
Sbjct: 50 KNIDNFLSRYKDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAM 104
Query: 452 KILKPSEDVIKE---FVLEIEIITTLHHKNIISLLGFCFEDNNLL-LVYDFLSRGSLEEN 507
K+L E + + F E I + + L + F+D+ L +V +++ G L N
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-N 163
Query: 508 LHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSD 567
L N P W+ Y V AL+ +HS IHRDVK N+LL +L+D
Sbjct: 164 LMSNYDVPEK--WARFYTAE--VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLAD 216
Query: 568 FGLAKWASTSSSHITCTDVAGTFGYV 593
FG + C GT Y+
Sbjct: 217 FGTCM-KMNKEGMVRCDTAVGTPDYI 241
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 119 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 166
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 167 NLAVNEDCELKILDFGLAR 185
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 396 KELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQV----YKGCLPDGKELAV 451
K ++ +Y T +DL ++ +IG+G +V +K K A+
Sbjct: 45 KNIDNFLSRYKDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAM 99
Query: 452 KILKPSEDVIKE---FVLEIEIITTLHHKNIISLLGFCFEDNNLL-LVYDFLSRGSLEEN 507
K+L E + + F E I + + L + F+D+ L +V +++ G L N
Sbjct: 100 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-N 158
Query: 508 LHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSD 567
L N P W+ Y V AL+ +HS IHRDVK N+LL +L+D
Sbjct: 159 LMSNYDVPEK--WARFYTAE--VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLAD 211
Query: 568 FGLAKWASTSSSHITCTDVAGTFGYV 593
FG + C GT Y+
Sbjct: 212 FGTCM-KMNKEGMVRCDTAVGTPDYI 236
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 119 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 166
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 167 NLAVNEDCELKILDFGLAR 185
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 149
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 396 KELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQV----YKGCLPDGKELAV 451
K ++ +Y T +DL ++ +IG+G +V +K K A+
Sbjct: 50 KNIDNFLSRYKDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAM 104
Query: 452 KILKPSEDVIKE---FVLEIEIITTLHHKNIISLLGFCFEDNNLL-LVYDFLSRGSLEEN 507
K+L E + + F E I + + L + F+D+ L +V +++ G L N
Sbjct: 105 KLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-N 163
Query: 508 LHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSD 567
L N P W+ Y V AL+ +HS IHRDVK N+LL +L+D
Sbjct: 164 LMSNYDVPEK--WARFYTAE--VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLAD 216
Query: 568 FGLAKWASTSSSHITCTDVAGTFGYV 593
FG + C GT Y+
Sbjct: 217 FGTCM-KMNKEGMVRCDTAVGTPDYI 241
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 153
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFC 486
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 487 F------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHS 539
+ ++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 140
Query: 540 GSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 114 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 161
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 162 NLAVNEDCELKILDFGLAR 180
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F +
Sbjct: 40 VIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 488 ------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 154
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 155 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 104
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 105 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 152
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 153 NLAVNEDCELKILDFGLAR 171
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 114 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 161
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 162 NLAVNEDCELKILDFGLAR 180
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGF-----CFEDNNLLLVYD 497
G +AVK L +P + +I K E+ ++ + H+N+I LL E+ N + +
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 498 FLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNI 555
L L + K D F + + L+Y+HS +IHRD+K SN+
Sbjct: 126 HLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPSNL 175
Query: 556 LLSDDFEPQLSDFGLAK 572
+++D E ++ DFGLA+
Sbjct: 176 AVNEDCELKILDFGLAR 192
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 118 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 165
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 166 NLAVNEDCELKILDFGLAR 184
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 127 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 174
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 175 NLAVNEDCELKILDFGLAR 193
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFC 486
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 487 F------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHS 539
+ ++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 140
Query: 540 GSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 104 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 151
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 152 NLAVNEDCELKILDFGLAR 170
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFC 486
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 487 F------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHS 539
+ ++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 144
Query: 540 GSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 145 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 103 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 150
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 151 NLAVNEDCELKILDFGLAR 169
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGF-----CFEDNNLLLVYD 497
G +AVK L +P + +I K E+ ++ + H+N+I LL E+ N + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 498 FLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNI 555
L L + K D F + + L+Y+HS +IHRD+K SN+
Sbjct: 103 HLMGADLNNIVKCAKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPSNL 152
Query: 556 LLSDDFEPQLSDFGLAK 572
+++D E ++ DFGLA+
Sbjct: 153 AVNEDCELKILDFGLAR 169
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 104 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 151
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 152 NLAVNEDCELKILDFGLAR 170
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ Q++DFG AK
Sbjct: 172 LMIDQQGYIQVTDFGFAK 189
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 112 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 159
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 160 NLAVNEDCELKILDFGLAR 178
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLXGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 109 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 156
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 157 NLAVNEDCELKILDFGLAR 175
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 105
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 106 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 153
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 154 NLAVNEDCELKILDFGLAR 172
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 109 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 156
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 157 NLAVNEDSELKILDFGLAR 175
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFC 486
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 487 F------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHS 539
+ ++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 140
Query: 540 GSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 114 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 161
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 162 NLAVNEDCELKILDFGLAR 180
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGF-----CFEDNNLLLVYD 497
G +AVK L +P + +I K E+ ++ + H+N+I LL E+ N + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 498 FLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNI 555
L L + K D F + + L+Y+HS +IHRD+K SN+
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPSNL 156
Query: 556 LLSDDFEPQLSDFGLAK 572
+++D E ++ DFGLA+
Sbjct: 157 AVNEDCELKILDFGLAR 173
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 130 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 177
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 178 NLAVNEDCELKILDFGLAR 196
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 109 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 156
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 157 NLAVNEDCELKILDFGLAR 175
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFC 486
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 487 F------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHS 539
+ ++ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 141
Query: 540 GSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 142 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL- 124
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 125 LYQMLXGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 172
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 112 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 159
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 160 NLAVNEDCELKILDFGLAR 178
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 130 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 177
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 178 NLAVNEDCELKILDFGLAR 196
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 27/161 (16%)
Query: 428 NLIGKGGSSQVYKGCL--PDGKELAVKILKPSEDVIK----------EFVLEIEIITTLH 475
+IGKG S V + C+ G++ AVKI+ DV K + E I L
Sbjct: 32 EVIGKGPFS-VVRRCINRETGQQFAVKIV----DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY--KVAMGVAEA 533
H +I+ LL D L +V++F+ L + K+ A F +SE + EA
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEA 144
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLS--DDFEP-QLSDFGLA 571
L Y H + +IHRDVK +LL+ ++ P +L FG+A
Sbjct: 145 LRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 113 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 160
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 161 NLAVNEDSELKILDFGLAR 179
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 109 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 156
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 157 NLAVNEDCELKILDFGLAR 175
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGF-----CFEDNNLLLVYD 497
G +AVK L +P + +I K E+ ++ + H+N+I LL E+ N + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 498 FLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNI 555
L L + K D F + + L+Y+HS +IHRD+K SN+
Sbjct: 113 HLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPSNL 162
Query: 556 LLSDDFEPQLSDFGLAK 572
+++D E ++ DFGLA+
Sbjct: 163 AVNEDCELKILDFGLAR 179
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKE------FVLEIEIITTLHHKNIIS 481
++G GG S+V+ L D +++AVK+L+ D+ ++ F E + L+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 482 LLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+ + +V +++ +L + +H G + +A+A + L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQAL 129
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT-DVAGTFGYV 593
+ +IHRDVK +NIL+S ++ DFG+A+ + S + + T V GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 155 NLAVNEDCELKILDFGLAR 173
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 142
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T+ T YV
Sbjct: 143 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYV 184
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKW 573
K+A+ + +ALE+LHS + VIHRDVK SN+L++ + ++ DFG++ +
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY 203
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
+++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ +++DFG AK
Sbjct: 172 LLIDQQGYIKVADFGFAK 189
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 27/161 (16%)
Query: 428 NLIGKGGSSQVYKGCL--PDGKELAVKILKPSEDVIK----------EFVLEIEIITTLH 475
+IGKG S V + C+ G++ AVKI+ DV K + E I L
Sbjct: 30 EVIGKGPFS-VVRRCINRETGQQFAVKIV----DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY--KVAMGVAEA 533
H +I+ LL D L +V++F+ L + K+ A F +SE + EA
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILEA 142
Query: 534 LEYLHSGSAQRVIHRDVKSSNILLS--DDFEP-QLSDFGLA 571
L Y H + +IHRDVK +LL+ ++ P +L FG+A
Sbjct: 143 LRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 416 DLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSED-----------VIKE 463
+L + S + + I G V G +G +A+K + D + K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 464 FVLEIEIITTLHHKNIISL--LGFCFED---NNLLLVYDFLSRGSLEENLHGNKK--DPA 516
+ EI ++ HH NI+ L + FE+ + L LV + L R L + +H + P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQ 134
Query: 517 AFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ Y + +G L LH V+HRD+ NILL+D+ + + DF LA+
Sbjct: 135 HIQYF-MYHILLG----LHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFC 486
+IG G VY+ L D EL V I K +D K F E++I+ L H NI+ L F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 487 FEDNN------LLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHS 539
+ L LV D++ H ++ K + + Y + +L Y+HS
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHS 140
Query: 540 GSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
+ HRD+K N+LL D +L DFG AK
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 113 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 160
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGLA+
Sbjct: 161 NLAVNEDCELKILDFGLAR 179
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 15/137 (10%)
Query: 430 IGKGGSSQVYKGCLPD--------GKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNII 480
+G+G ++++KG + E+ +K+L K + + F +++ L HK+++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
G CF + +LV +F+ GSL+ L N K+ W + +VA +A A+ +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKN-KNCINILW--KLEVAKQLAWAMHFLEEN 132
Query: 541 SAQRVIHRDVKSSNILL 557
+ +IH +V + NILL
Sbjct: 133 T---LIHGNVCAKNILL 146
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 430 IGKGGSSQVYKGCLP--DGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLG 484
+GKG S V + C+ G+E A I+ K S ++ E I L H NI+ L
Sbjct: 19 LGKGAFS-VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
E+ + L++D ++ G L E++ A + + + + LE +
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDI-------VAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 545 VIHRDVKSSNILLSDDFEP---QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
V+HR++K N+LL+ + +L+DFGLA AGT GY+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYL 180
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 416 DLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSED-----------VIKE 463
+L + S + + I G V G +G +A+K + D + K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 464 FVLEIEIITTLHHKNIISL--LGFCFED---NNLLLVYDFLSRGSLEENLHGNKK--DPA 516
+ EI ++ HH NI+ L + FE+ + L LV + L R L + +H + P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQ 134
Query: 517 AFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+ Y + +G L LH V+HRD+ NILL+D+ + + DF LA+
Sbjct: 135 HIQYF-MYHILLG----LHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 446 GKELAVKILKPSE------DVIKEFV-LEIEIITTLHHKNIISLLGFCFEDNNLLLVYDF 498
GKE A K +K V +E + E+ I+ + H NII+L +++L+ +
Sbjct: 30 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89
Query: 499 LSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS 558
+S G L + L + + E + + + + YLHS +R+ H D+K NI+L
Sbjct: 90 VSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLL 142
Query: 559 DDFEP----QLSDFGLA 571
D P +L DFG+A
Sbjct: 143 DKNVPNPRIKLIDFGIA 159
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 33/233 (14%)
Query: 347 ANSDVKQITYDPGDNESINLNGDSGA---IVPVGNEIVSSPLSTDHDSTEL-PKELEGLH 402
N ++++P + E D G +P+ E+ SP + D E+ PKE+
Sbjct: 312 GNRQESTVSFNPYEPELAPWAADKGPQREALPMDTEVYESPYA---DPEEIRPKEV---- 364
Query: 403 EKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSED--- 459
+L +D + NF G + Y K +AVKILK +
Sbjct: 365 ---YLDRKLLTLEDKELGSGNF--------GTVKKGYYQMKKVVKTVAVKILKNEANDPA 413
Query: 460 VIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFG 519
+ E + E ++ L + I+ ++G C E + +LV + G L + L N+
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 472
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 473 IELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 518
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKW 573
K+A+ + +ALE+LHS + VIHRDVK SN+L++ + ++ DFG++ +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY 159
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 446 GKELAVKILKPSE------DVIKEFV-LEIEIITTLHHKNIISLLGFCFEDNNLLLVYDF 498
GKE A K +K V +E + E+ I+ + H NII+L +++L+ +
Sbjct: 51 GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 110
Query: 499 LSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS 558
+S G L + L + + E + + + + YLHS +R+ H D+K NI+L
Sbjct: 111 VSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLL 163
Query: 559 DDFEP----QLSDFGLA 571
D P +L DFG+A
Sbjct: 164 DKNVPNPRIKLIDFGIA 180
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 20/119 (16%)
Query: 467 EIEIITTLHHKNIISLLGFC--------FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF 518
E+ ++ ++HKNIISLL F+D L++ L +L + +H + D
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME---LMDANLCQVIH-MELDHERM 126
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
+ Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ AST+
Sbjct: 127 SYL-LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ ++K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKSQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DFGL +
Sbjct: 155 NLAVNEDSELKILDFGLCR 173
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKEL----AVKILKPSEDVIKEFVLEIEIITTLH 475
ATS + IG G VYK P +V++ E + V E+ ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 476 ---HKNIISLLGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVA 527
H N++ L+ C + + LV++ + + + + +K P +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLM 118
Query: 528 MGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
L++LH+ ++HRD+K NIL++ +L+DFGLA+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKEL----AVKILKPSEDVIKEFVLEIEIITTLH 475
ATS + IG G VYK P +V++ E + V E+ ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 476 ---HKNIISLLGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVA 527
H N++ L+ C + + LV++ + + + + +K P +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLM 118
Query: 528 MGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
L++LH+ ++HRD+K NIL++ +L+DFGLA+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 423 NFLAENLIGKGGSSQ-VYKGCLPDGKELAVKILKPSEDVIKEFVLEIEII-TTLHHKNII 480
+F ++++G G VY+G D +++AVK + P + E++++ + H N+I
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILP--ECFSFADREVQLLRESDEHPNVI 81
Query: 481 SLLGFCFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHS 539
FC E D + L +L+E + +KD A G E + L +LHS
Sbjct: 82 RY--FCTEKDRQFQYIAIELCAATLQEYV--EQKDFAHLGL-EPITLLQQTTSGLAHLHS 136
Query: 540 GSAQRVIHRDVKSSNILLS-----DDFEPQLSDFGLA-KWASTSSSHITCTDVAGTFGYV 593
+ ++HRD+K NIL+S + +SDFGL K A S + V GT G++
Sbjct: 137 LN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 114
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 115 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 24/188 (12%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLP-DGKELAVKILKPSEDVIKEFVLEIEII------- 471
ATS + IG G VYK P G +A+K ++ L I +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 472 --TTLHHKNIISLLGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERY 524
H N++ L+ C + + LV++ + + + + +K P
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIK 123
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT 584
+ L++LH+ ++HRD+K NIL++ +L+DFGLA+ S + T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALT 177
Query: 585 DVAGTFGY 592
V T Y
Sbjct: 178 PVVVTLWY 185
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 120
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 121 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 165
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EI + L H +II L ++++V ++ + G L + + K+ E +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKR----MTEDEGRRF 113
Query: 527 AMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ A+EY H +++HRD+K N+LL D+ +++DFGL+
Sbjct: 114 FQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 108
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 109 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 153
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 420 ATSNFLAENLIGKGGSSQVYKGCLPDGKEL----AVKILKPSEDVIKEFVLEIEIITTLH 475
ATS + IG G VYK P +V++ E + V E+ ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 476 ---HKNIISLLGFCF-----EDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVA 527
H N++ L+ C + + LV++ + + + + +K P +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLM 118
Query: 528 MGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
L++LH+ ++HRD+K NIL++ +L+DFGLA+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 110
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 111 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 155
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 114
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 115 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 130
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 131 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 130
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 131 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 446 GKELAVKILKPSE------DVIKEFV-LEIEIITTLHHKNIISLLGFCFEDNNLLLVYDF 498
GKE A K +K V +E + E+ I+ + H NII+L +++L+ +
Sbjct: 37 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 96
Query: 499 LSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS 558
+S G L + L + + E + + + + YLHS +R+ H D+K NI+L
Sbjct: 97 VSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLL 149
Query: 559 DDFEP----QLSDFGLA 571
D P +L DFG+A
Sbjct: 150 DKNVPNPRIKLIDFGIA 166
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 134 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 188
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 189 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGW 520
E + E ++ L + I+ ++G C E + +LV + G L + L N+ KD
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII-- 128
Query: 521 SERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++V+MG ++YL + +HRD+ + N+LL ++SDFGL+K
Sbjct: 129 ELVHQVSMG----MKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 173
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 169
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 170 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 446 GKELAVKILKPSEDVIKE----FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G E A+KI+K S + E+ ++ L H NI+ L F + N LV +
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL---S 558
G L + + +K F + + V YLH ++HRD+K N+LL S
Sbjct: 106 GELFDEIILRQK----FSEVDAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKS 158
Query: 559 DDFEPQLSDFGLA 571
D ++ DFGL+
Sbjct: 159 RDALIKIVDFGLS 171
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEFVL--EIEIITTLHHKNIISLLGF 485
++GKG VY G L + +A+K + P D L EI + L HKNI+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 486 CFEDNNLLLVYDFLSRGSLEENLHGN----KKDPAAFGWSERYKVAMGVAEALEYLHSGS 541
E+ + + + + GSL L K + G+ + + E L+YLH
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHD-- 140
Query: 542 AQRVIHRDVKSSNILLSD-DFEPQLSDFGLAKWASTSSSHITCTDV-AGTFGYV 593
+++HRD+K N+L++ ++SDFG +K + + CT+ GT Y+
Sbjct: 141 -NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTGTLQYM 190
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYK 525
E +I+ ++ + ++SL + +E + L LV ++ G L+ H A F +
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVF 290
Query: 526 VAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTD 585
A + LE LH +R+++RD+K NILL D ++SD GLA T
Sbjct: 291 YAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKG 344
Query: 586 VAGTFGYV 593
GT GY+
Sbjct: 345 RVGTVGYM 352
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 134 LLIVXECLDGGELFSRIQD--RGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDVK 188
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 189 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 230
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 142
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 143 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 184
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 145 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 186
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 140 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 194
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 195 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 236
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 446 GKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G+++A+KI+ D+ EI + L H +II L + +++V ++
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 97
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
+ + +K E + + A+EY H +++HRD+K N+LL +
Sbjct: 98 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHL 149
Query: 562 EPQLSDFGLA 571
+++DFGL+
Sbjct: 150 NVKIADFGLS 159
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 22/154 (14%)
Query: 429 LIGKGGSSQVYKGC--LPDGKELAVKILKPSEDVIKEFVL-EIEIITTLHHKNIISLLGF 485
++G G QV+K C G +LA KI+K KE V EI ++ L H N+I L
Sbjct: 96 ILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 486 CFEDNNLLLVYDFLSRGSL-----EENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
N+++LV +++ G L +E+ + + D F + E + ++H
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILF--------MKQICEGIRHMHQ- 205
Query: 541 SAQRVIHRDVKSSNILL--SDDFEPQLSDFGLAK 572
++H D+K NIL D + ++ DFGLA+
Sbjct: 206 --MYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ D+GLA+
Sbjct: 155 NLAVNEDCELKILDYGLAR 173
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 89 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 143
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 144 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 185
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 94 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 148
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 149 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 190
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNN-LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYK 525
E +I+ ++ + ++SL + +E + L LV ++ G L+ H A F +
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVF 290
Query: 526 VAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTD 585
A + LE LH +R+++RD+K NILL D ++SD GLA T
Sbjct: 291 YAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKG 344
Query: 586 VAGTFGYV 593
GT GY+
Sbjct: 345 RVGTVGYM 352
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 95 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 149
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 150 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 191
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 446 GKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G+++A+KI+ D+ EI + L H +II L + +++V ++
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 98
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
+ + +K E + + A+EY H +++HRD+K N+LL +
Sbjct: 99 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHL 150
Query: 562 EPQLSDFGLA 571
+++DFGL+
Sbjct: 151 NVKIADFGLS 160
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 145 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 186
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 96 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 150
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 151 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 192
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 132
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 133 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 169
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 170 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLLG 484
IG GGSS+V++ + A+K + E + + EI + L H II L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGS 541
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 124 YEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQHG 175
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A ++ + GT Y+
Sbjct: 176 ---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 446 GKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G+++A+KI+ D+ EI + L H +II L + +++V ++
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 92
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
+ + +K E + + A+EY H +++HRD+K N+LL +
Sbjct: 93 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHL 144
Query: 562 EPQLSDFGLA 571
+++DFGL+
Sbjct: 145 NVKIADFGLS 154
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 130
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 131 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 178
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 446 GKELAVKILK----PSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G+++A+KI+ D+ EI + L H +II L + +++V ++
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 88
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDF 561
+ + +K E + + A+EY H +++HRD+K N+LL +
Sbjct: 89 ELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHL 140
Query: 562 EPQLSDFGLA 571
+++DFGL+
Sbjct: 141 NVKIADFGLS 150
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 132
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 133 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 104 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 158
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
N+L + P +L+DFG AK ++SH + T T YV
Sbjct: 159 PENLLYTSK-RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYV 200
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H +++ ED+++L+ ++ + GSL + + N + + F +E + + V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 536 YLHSGSAQRVIHRDVKSSNILLS 558
Y+HS S ++H D+K SNI +S
Sbjct: 128 YIHSMS---LVHMDIKPSNIFIS 147
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 125
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 126 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNII--------SLLGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ + L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYAPGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ +++DFG AK
Sbjct: 173 LMIDQQGYIKVTDFGFAK 190
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSED--VIKEFVLEIEIITTLHHKNIISLLGF 485
++GKG VY G L + +A+K + P D + EI + L HKNI+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIVQYLG- 72
Query: 486 CFEDNNLLLVY-DFLSRGSLEENLHGN----KKDPAAFGWSERYKVAMGVAEALEYLHSG 540
F +N + ++ + + GSL L K + G+ + + E L+YLH
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHD- 126
Query: 541 SAQRVIHRDVKSSNILLSD-DFEPQLSDFGLAKWASTSSSHITCTDV-AGTFGYV 593
+++HRD+K N+L++ ++SDFG +K + + CT+ GT Y+
Sbjct: 127 --NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTGTLQYM 176
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H +++ ED+++L+ ++ + GSL + + N + + F +E + + V L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 536 YLHSGSAQRVIHRDVKSSNILLS 558
Y+HS S ++H D+K SNI +S
Sbjct: 130 YIHSMS---LVHMDIKPSNIFIS 149
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H +++ ED+++L+ ++ + GSL + + N + + F +E + + V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 536 YLHSGSAQRVIHRDVKSSNILLS 558
Y+HS S ++H D+K SNI +S
Sbjct: 128 YIHSMS---LVHMDIKPSNIFIS 147
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNII--------SLLGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ + L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ +++DFG AK
Sbjct: 173 LMIDQQGYIKVTDFGFAK 190
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPD-GKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNI 479
S ++ +G GG+ V+ D K +A+K I+ +K + EI+II L H NI
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 480 ISLL--------------GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYK 525
+ + G E N++ +V ++ +E +L N +
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-----METDL-ANVLEQGPLLEEHARL 124
Query: 526 VAMGVAEALEYLHSGSAQRVIHRDVKSSNILL-SDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K +N+ + ++D ++ DFGLA+ SH
Sbjct: 125 FMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 447 KELAVKILKPSEDVIKE----FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRG 502
K A+K+L E + + F E +I+ + ++ L +D L +V +++ G
Sbjct: 101 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG 160
Query: 503 SLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
L NL N P W++ Y V AL+ +HS +IHRDVK N+LL
Sbjct: 161 DLV-NLMSNYDVPEK--WAKFYTAE--VVLALDAIHS---MGLIHRDVKPDNMLLDKHGH 212
Query: 563 PQLSDFGLA-KWASTSSSHITCTDVAGTFGYV 593
+L+DFG K T H C GT Y+
Sbjct: 213 LKLADFGTCMKMDETGMVH--CDTAVGTPDYI 242
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLLG 484
IG GGSS+V++ + A+K + E + + EI + L H II L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGS 541
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 80 YEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQHG 131
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A ++ + GT Y+
Sbjct: 132 ---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 430 IGKGGSSQVYKGCLPDGKEL-AVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLL 483
IG GGSS+V++ L + K++ A+K + E + + EI + L H II L
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSG 540
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQH 174
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A ++ + GT Y+
Sbjct: 175 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 124
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 125 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H +++ ED+++L+ ++ + GSL + + N + + F +E + + V L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 536 YLHSGSAQRVIHRDVKSSNILLS 558
Y+HS S ++H D+K SNI +S
Sbjct: 126 YIHSMS---LVHMDIKPSNIFIS 145
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNIISLL L D +L ++ NL + D +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL- 125
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 126 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNII--------SLLGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ + L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ +++DFG AK
Sbjct: 173 LMIDQQGYIKVTDFGFAK 190
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLLG 484
IG GGSS+V++ + A+K + E + + EI + L H II L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGS 541
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 76 YEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQHG 127
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A ++ + GT Y+
Sbjct: 128 ---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYAPGGEMFSHLRRIGRFXEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ +++DFG AK
Sbjct: 172 LMIDQQGYIKVTDFGFAK 189
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ +++DFG AK
Sbjct: 173 LMIDQQGYIKVTDFGFAK 190
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 447 KELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGS 503
+++AVK L +P + +I + E+ ++ L H+N+I LL + + DF S
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVY 109
Query: 504 LEENLHG----NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSD 559
L L G N A + + L+Y+HS +IHRD+K SN+ +++
Sbjct: 110 LVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNE 166
Query: 560 DFEPQLSDFGLAKWASTSSSHITCT 584
D E ++ DFGLA+ A + T
Sbjct: 167 DSELRILDFGLARQADEEMTGYVAT 191
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLLG 484
IG GGSS+V++ + A+K + E + + EI + L H II L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGS 541
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 96 YEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQHG 147
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A ++ + GT Y+
Sbjct: 148 ---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLLG 484
IG GGSS+V++ + A+K + E + + EI + L H II L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGS 541
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 77 YEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQHG 128
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A ++ + GT Y+
Sbjct: 129 ---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISL--------LGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I+ L F F+DN NL +V
Sbjct: 66 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 171
Query: 555 ILLSDDFEPQLSDFGLAK 572
+++ +++DFG AK
Sbjct: 172 LMIDQQGYIKVTDFGFAK 189
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 446 GKELAVKILKPSEDVIKE----FVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSR 501
G E A+KI+K S + E+ ++ L H NI+ L F + N LV +
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 88
Query: 502 GSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL---S 558
G L + + +K F + + V YLH ++HRD+K N+LL S
Sbjct: 89 GELFDEIILRQK----FSEVDAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKS 141
Query: 559 DDFEPQLSDFGLA 571
D ++ DFGL+
Sbjct: 142 RDALIKIVDFGLS 154
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKE------FVLEIEIITTLHHKNIIS 481
++G GG S+V+ L +++AVK+L+ D+ ++ F E + L+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 482 LLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+ + +V +++ +L + +H G + +A+A + L
Sbjct: 77 VYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQAL 129
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT-DVAGTFGYV 593
+ +IHRDVK +NI++S ++ DFG+A+ + S + +T T V GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDG-KELAVK-ILKPSEDVI--KEFVLEIEIITTLHHKN 478
N+ ++LIG+G VY + K +A+K + + ED+I K + EI I+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 479 IISLLGFCFEDNNLLLVYD--FLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
II L ++ LL +D ++ + +L K P + + ++
Sbjct: 89 IIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
+H +IHRD+K +N LL+ D ++ DFGLA+
Sbjct: 147 IHESG---IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 525 KVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKW 573
K+A+ + +ALE+LHS + VIHRDVK SN+L++ + + DFG++ +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGY 186
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ +G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 139 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 130 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ +G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 141 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 20/119 (16%)
Query: 467 EIEIITTLHHKNIISLLGFC--------FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAF 518
E+ ++ ++HKNIISLL F+D L++ L +L + +H + D
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME---LMDANLCQVIHM-ELDHERM 128
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
+ Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A T+
Sbjct: 129 SYL-LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ +G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL+V + L G L + + AF E ++ + EA++YLHS + + HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 552 SSNILLSDDFEP----QLSDFGLAKWASTSSSHITCTDVA-GTFGYVVLILNP 599
N+L + P +L+DFG AK + +C + G Y++L P
Sbjct: 145 PENLLYTSK-RPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYP 196
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 25/138 (18%)
Query: 446 GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNI--------ISLLGFCFEDN-NLLLVY 496
G A+KIL + V+K + +IE TL+ K I + L F F+DN NL +V
Sbjct: 67 GNHYAMKILD-KQKVVK--LKQIE--HTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVL 121
Query: 497 DFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSN 554
++ G + +L G +P A R+ A + EYLHS +I+RD+K N
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHA-----RFYAAQ-IVLTFEYLHSLD---LIYRDLKPEN 172
Query: 555 ILLSDDFEPQLSDFGLAK 572
+L+ +++DFG AK
Sbjct: 173 LLIDQQGYIKVADFGFAK 190
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 31/184 (16%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKEL-AVKILKPSEDVIKEFVLEIEIITTLHHKNIIS 481
NFL ++GKG +V EL AVKILK +DV+ + + ++ T+ K +++
Sbjct: 344 NFLM--VLGKGSFGKVMLSERKGTDELYAVKILK--KDVV---IQDDDVECTMVEKRVLA 396
Query: 482 LLG---------FCFED-NNLLLVYDFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMG 529
L G CF+ + L V ++++ G L ++ G K+P A + A
Sbjct: 397 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAE 450
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGT 589
+A L +L S + +I+RD+K N++L + +++DFG+ K +T GT
Sbjct: 451 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGT 505
Query: 590 FGYV 593
Y+
Sbjct: 506 PDYI 509
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+LL+ + ++ DFGLA+ A H
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 447 KELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGS 503
+++AVK L +P + +I + E+ ++ L H+N+I LL + + DF S
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVY 101
Query: 504 LEENLHG----NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSD 559
L L G N A + + L+Y+HS +IHRD+K SN+ +++
Sbjct: 102 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNE 158
Query: 560 DFEPQLSDFGLAKWASTSSSHITCT 584
D E ++ DFGLA+ A + T
Sbjct: 159 DCELRILDFGLARQADEEMTGYVAT 183
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ DF LA+
Sbjct: 155 NLAVNEDCELKILDFYLAR 173
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 447 KELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGS 503
+++AVK L +P + +I + E+ ++ L H+N+I LL + + DF S
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVY 109
Query: 504 LEENLHG----NKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSD 559
L L G N A + + L+Y+HS +IHRD+K SN+ +++
Sbjct: 110 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNE 166
Query: 560 DFEPQLSDFGLAKWASTSSSHITCT 584
D E ++ DFGLA+ A + T
Sbjct: 167 DSELRILDFGLARQADEEMTGYVAT 191
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKE------FVLEIEIITTLHHKNIIS 481
++G GG S+V+ L +++AVK+L+ D+ ++ F E + L+H I++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 482 LLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+ + +V +++ +L + +H G + +A+A + L
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQAL 129
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT-DVAGTFGYV 593
+ +IHRDVK +NI++S ++ DFG+A+ + S + +T T V GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
+ L+Y+HS + V+HRD+K SN+L++ + ++ DFGLA+ A H
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDD--FEPQLSDFGLAK--WASTSSSHITCTD 585
+ AL YLH+ Q + HRD+K N L S + FE +L DFGL+K + + + T
Sbjct: 177 IFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 586 VAGTFGYV 593
AGT +V
Sbjct: 234 KAGTPYFV 241
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAV--KILKPSEDVIKEFV-LEIEIITTLHHKNIISLLG 484
+IG G VY+ L D EL K+L+ K F E++I+ L H NI+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIVRLRY 80
Query: 485 FCF------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYL 537
F + ++ L LV D++ H ++ K + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
HS + HRD+K N+LL D +L DFG AK
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 430 IGKGGSSQVYKGCLPD--------GKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNII 480
+G+G ++++KG + E+ +K+L K + + F +++ L HK+++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 481 SLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSG 540
G C + +LV +F+ GSL+ L N K+ W + +VA +A A+ +L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILW--KLEVAKQLAAAMHFLEEN 132
Query: 541 SAQRVIHRDVKSSNILL 557
+ +IH +V + NILL
Sbjct: 133 T---LIHGNVCAKNILL 146
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 18/150 (12%)
Query: 449 LAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE-- 506
+AVK ++ E + EI +L H NI+ +L +V ++ S G L E
Sbjct: 47 VAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 507 -NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQL 565
N +D A F + + + + Y H A +V HRD+K N LL P+L
Sbjct: 107 CNAGRFSEDEARFFFQQ-------LISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 566 S--DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFG +K +S H GT Y+
Sbjct: 157 KICDFGYSK---SSVLHSQPKSTVGTPAYI 183
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAV--KILKPSEDVIKEFV-LEIEIITTLHHKNIISLLG 484
+IG G VY+ L D EL K+L+ K F E++I+ L H NI+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIVRLRY 80
Query: 485 FCF------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYL 537
F + ++ L LV D++ H ++ K + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
HS + HRD+K N+LL D +L DFG AK
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 430 IGKGGSSQVYKGCLPD---GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
+G+G +V++ + D G + AVK ++ ++E V L I+ L G
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEELV----ACAGLSSPRIVPLYGAV 119
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVA-EALEYLHSGSAQRV 545
E + + + L GSL + + P +R +G A E LEYLH+ +R+
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHT---RRI 171
Query: 546 IHRDVKSSNILLSDD-FEPQLSDFGLA 571
+H DVK+ N+LLS D L DFG A
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 445 DGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN--LLLVYDFL 499
DGK L K L +E + V E+ ++ L H NI+ + N L +V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 500 SRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH--SGSAQRVIHRDVKSSNILL 557
G L + K+ +V + AL+ H S V+HRD+K +N+ L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 558 SDDFEPQLSDFGLAKWASTSSS 579
+L DFGLA+ + +S
Sbjct: 150 DGKQNVKLGDFGLARILNHDTS 171
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKE------FVLEIEIITTLHHKNIIS 481
++G GG S+V+ L +++AVK+L+ D+ ++ F E + L+H I++
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLR--ADLARDPSFYLRFRREAQNAAALNHPAIVA 93
Query: 482 LLGFCFEDNNL----LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYL 537
+ + +V +++ +L + +H G + +A+A + L
Sbjct: 94 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVIADACQAL 146
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCT-DVAGTFGYV 593
+ +IHRDVK +NI++S ++ DFG+A+ + S + +T T V GT Y+
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
E+ L I+ L G E + + + L GSL + + P +R
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP-----EDRALY 189
Query: 527 AMGVA-EALEYLHSGSAQRVIHRDVKSSNILLSDD-FEPQLSDFGLA 571
+G A E LEYLHS +R++H DVK+ N+LLS D L DFG A
Sbjct: 190 YLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 449 LAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE-- 506
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 507 -NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQL 565
N +D A F + + + + Y H A +V HRD+K N LL P+L
Sbjct: 107 CNAGRFSEDEARFFFQQ-------LISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRL 156
Query: 566 --SDFGLAKWASTSSSHITCTDVAGTFGYV 593
+DFG +K S H GT Y+
Sbjct: 157 KIADFGYSK---ASVLHSQPKSAVGTPAYI 183
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
E+ L I+ L G E + + + L GSL + + P +R
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP-----EDRALY 170
Query: 527 AMGVA-EALEYLHSGSAQRVIHRDVKSSNILLSDD-FEPQLSDFGLA 571
+G A E LEYLHS +R++H DVK+ N+LLS D L DFG A
Sbjct: 171 YLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 31/184 (16%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDGKEL-AVKILKPSEDVIKEFVLEIEIITTLHHKNIIS 481
NFL ++GKG +V EL AVKILK +DV+ + + ++ T+ K +++
Sbjct: 23 NFLM--VLGKGSFGKVMLSERKGTDELYAVKILK--KDVV---IQDDDVECTMVEKRVLA 75
Query: 482 LLG---------FCFED-NNLLLVYDFLSRGSLEENLH--GNKKDPAAFGWSERYKVAMG 529
L G CF+ + L V ++++ G L ++ G K+P A + A
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAE 129
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGT 589
+A L +L S + +I+RD+K N++L + +++DFG+ K +T GT
Sbjct: 130 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGT 184
Query: 590 FGYV 593
Y+
Sbjct: 185 PDYI 188
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 445 DGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN--LLLVYDFL 499
DGK L K L +E + V E+ ++ L H NI+ + N L +V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 500 SRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH--SGSAQRVIHRDVKSSNILL 557
G L + K+ +V + AL+ H S V+HRD+K +N+ L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 558 SDDFEPQLSDFGLAKWASTSSS 579
+L DFGLA+ + +S
Sbjct: 150 DGKQNVKLGDFGLARILNHDTS 171
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 422 SNFLAE-------NLIGKGGSSQV------YKGCLPDGKELAVKILKP---SEDVIKEFV 465
S+FL E +IGKG + YK P G+ + V+ + S +++
Sbjct: 2 SSFLPEGGCYELLTVIGKGFEDLMTVNLARYK---PTGEYVTVRRINLEACSNEMVTFLQ 58
Query: 466 LEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSER-- 523
E+ + +H NI+ DN L +V F++ GS ++ + + D G +E
Sbjct: 59 GELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD----GMNELAI 114
Query: 524 YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
+ GV +AL+Y+H +HR VK+S+IL+S D + LS
Sbjct: 115 AYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLS 154
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 476 HKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
H NI+ L + + LV + L+ G L E + K F +E + + A+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVS 120
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDD---FEPQLSDFGLAK 572
++H V+HRD+K N+L +D+ E ++ DFG A+
Sbjct: 121 HMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 430 IGKGGSSQVYKGCLPDGKELAVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLLG 484
IG GGSS+V++ + A+K + E + + EI + L H II L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGS 541
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 96 YEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQHG 147
Query: 542 AQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A + GT Y+
Sbjct: 148 ---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ FGLA+
Sbjct: 155 NLAVNEDCELKILGFGLAR 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 28/167 (16%)
Query: 418 LSATSNFLAE-------NLIGKGGSSQV------YKGCLPDGKELAVKILKP---SEDVI 461
S+FL E +IGKG + YK P G+ + V+ + S +++
Sbjct: 14 FQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYK---PTGEYVTVRRINLEACSNEMV 70
Query: 462 KEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWS 521
E+ + +H NI+ DN L +V F++ GS ++ + + D G +
Sbjct: 71 TFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD----GMN 126
Query: 522 ER--YKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLS 566
E + GV +AL+Y+H +HR VK+S+IL+S D + LS
Sbjct: 127 ELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLS 170
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 449 LAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE-- 506
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E
Sbjct: 46 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 105
Query: 507 -NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQL 565
N +D A F + + + + Y H A +V HRD+K N LL P+L
Sbjct: 106 CNAGRFSEDEARFFFQQ-------LISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 155
Query: 566 S--DFGLAKWASTSSSHITCTDVAGTFGYV 593
DFG +K +S H GT Y+
Sbjct: 156 KICDFGYSK---SSVLHSQPKSTVGTPAYI 182
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 463 EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSL---EENLHGNKKDPAAFG 519
+F E++IIT + ++ ++ G + + ++Y+++ S+ +E K+ F
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 520 WSERYK-VAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWA 574
+ K + V + Y+H+ + + HRDVK SNIL+ + +LSDFG +++
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 483 LGFCFED-NNLLLVYDFLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEYLHS 539
L F F+ + L V D+++ G L +L + +P A R+ A +A AL YLHS
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA-----RF-YAAEIASALGYLHS 157
Query: 540 GSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
+ +++RD+K NILL L+DFGL K +S T + GT Y+
Sbjct: 158 LN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYL 206
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 430 IGKGGSSQVYKGCLPD---GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFC 486
+G+G +V++ + D G + AVK ++ ++E V L I+ L G
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEELV----ACAGLSSPRIVPLYGAV 135
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVA-EALEYLHSGSAQRV 545
E + + + L GSL + + P +R +G A E LEYLH+ +R+
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHT---RRI 187
Query: 546 IHRDVKSSNILLSDD-FEPQLSDFGLA 571
+H DVK+ N+LLS D L DFG A
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 430 IGKGGSSQVYKGCLPDGKEL-AVKILKPSE---DVIKEFVLEIEIITTL--HHKNIISLL 483
IG GGSS+V++ L + K++ A+K + E + + EI + L H II L
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSG 540
+ D + +V + G+++ N KK DP W ER + EA+ +H
Sbjct: 123 DYEITDQYIYMV---MECGNIDLNSWLKKKKSIDP----W-ERKSYWKNMLEAVHTIHQH 174
Query: 541 SAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
++H D+K +N L+ D +L DFG+A ++ + G Y+
Sbjct: 175 G---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 449 LAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE-- 506
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 507 -NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQL 565
N +D A F + + + + Y H A +V HRD+K N LL P+L
Sbjct: 107 CNAGRFSEDEARFFFQQ-------LISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 566 S--DFGLAKWASTSSSHITCTDVAGTFGYV 593
FG +K +S H D GT Y+
Sbjct: 157 KICAFGYSK---SSVLHSQPKDTVGTPAYI 183
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 384 PLSTDHDSTELPKELEGLHEKYSATCRLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCL 443
P + D++ L ++L+ + +Y +Q L G+G +V++ +
Sbjct: 46 PETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRL------------GRGSFGEVHR--M 91
Query: 444 PD---GKELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLS 500
D G + AVK ++ ++E V L I+ L G E + + + L
Sbjct: 92 KDKQTGFQCAVKKVRLEVFRVEELV----ACAGLSSPRIVPLYGAVREGPWVNIFMELLE 147
Query: 501 RGSLEENLHGNKKDPAAFGWSERYKVAMGVA-EALEYLHSGSAQRVIHRDVKSSNILLSD 559
GSL + + P +R +G A E LEYLH+ +R++H DVK+ N+LLS
Sbjct: 148 GGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSS 199
Query: 560 D-FEPQLSDFGLA 571
D L DFG A
Sbjct: 200 DGSRAALCDFGHA 212
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAV--KILKPSEDVIKEFV-LEIEIITTLHHKNIISLLG 484
+IG G VY+ L D EL K+L+ K F E++I+ L H NI+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIVRLRY 80
Query: 485 FCF------EDNNLLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYL 537
F + ++ L LV D++ H ++ K + + Y + +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 538 HSGSAQRVIHRDVKSSNILLSDDFEP-QLSDFGLAK 572
HS + HRD+K N+LL D +L DFG AK
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLHG---NKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 133
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 134 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ D GLA+
Sbjct: 155 NLAVNEDCELKILDAGLAR 173
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ D GLA+
Sbjct: 155 NLAVNEDCELKILDRGLAR 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 445 DGKELAVKIL---KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNN--LLLVYDFL 499
DGK L K L +E + V E+ ++ L H NI+ + N L +V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 500 SRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH--SGSAQRVIHRDVKSSNILL 557
G L + K+ +V + AL+ H S V+HRD+K +N+ L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 558 SDDFEPQLSDFGLAK 572
+L DFGLA+
Sbjct: 150 DGKQNVKLGDFGLAR 164
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLH---GNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 136
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 137 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 184
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 132
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 133 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENLH---GNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDN-NLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYK 525
EI I+ LHH +I+L FED ++L+ +FLS G L + + + +E
Sbjct: 98 EISIMNQLHHPKLINLHD-AFEDKYEMVLILEFLSGGELFDRIAA---EDYKMSEAEVIN 153
Query: 526 VAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEP--QLSDFGLA 571
E L+++H S ++H D+K NI+ ++ DFGLA
Sbjct: 154 YMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 131
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 132 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 448 ELAVKILKP---SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSL 504
E A+KI++ S + + E+ ++ L H NI+ L F + N LV + G L
Sbjct: 64 ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL 123
Query: 505 -EENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL---SDD 560
+E +H K F + + V + YLH ++HRD+K N+LL D
Sbjct: 124 FDEIIHRMK-----FNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKD 175
Query: 561 FEPQLSDFGLA 571
++ DFGL+
Sbjct: 176 ALIKIVDFGLS 186
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 505 EENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQ 564
EE+ G K+P + + VA +E+L S+++ IHRD+ + NILLS++ +
Sbjct: 185 EEDSDGFYKEPITM--EDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVK 239
Query: 565 LSDFGLAK 572
+ DFGLA+
Sbjct: 240 ICDFGLAR 247
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYD-FLSRGSLEENL---HGNKKDPAAFGWSE 522
E+ ++ ++HKNII LL +L D ++ ++ NL + D +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL- 125
Query: 523 RYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTS 577
Y++ G+ ++LHS +IHRD+K SNI++ D ++ DFGLA+ A TS
Sbjct: 126 LYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 446 GKELAVKIL-KPSEDVI--KEFVLEIEIITTLHHKNIISLLGFCF------EDNNLLLVY 496
G +AVK L +P + +I K E+ ++ + H+N+I LL E N++ LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 497 DFLSRGSLEENLHGNKK---DPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSS 553
+ G+ N+ +K D F + + L+Y+HS +IHRD+K S
Sbjct: 107 HLM--GADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD---IIHRDLKPS 154
Query: 554 NILLSDDFEPQLSDFGLAK 572
N+ +++D E ++ D GLA+
Sbjct: 155 NLAVNEDCELKILDGGLAR 173
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 486 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
CF+ ++ L V ++++ G L ++ +K P R+ A ++ AL YLH +
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLHE---RG 173
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYVVL-ILNPIAFL 603
+I+RD+K N+LL + +L+D+G+ K T + GT Y+ IL +
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYG 231
Query: 604 FMFNCW 609
F + W
Sbjct: 232 FSVDWW 237
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 486 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
CF+ ++ L V ++++ G L ++ +K P R+ A ++ AL YLH +
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLHE---RG 141
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYVV-LILNPIAFL 603
+I+RD+K N+LL + +L+D+G+ K T + GT Y+ IL +
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYG 199
Query: 604 FMFNCW 609
F + W
Sbjct: 200 FSVDWW 205
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 428 NLIGKGGSSQVYKGCLPDGKELAV--KILKPSEDVI--KEFVLEIEIITTLHHKNIISLL 483
+LIG G V + K + KIL+ ED+I K + EI I+ L+H +++ +L
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 484 GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQ 543
+ ++ + + + P + + ++Y+HS
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG-- 176
Query: 544 RVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
++HRD+K +N L++ D ++ DFGLA+
Sbjct: 177 -ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 526 VAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+ + +AEA+E+LHS ++HRD+K SNI + D ++ DFGL
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLV 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 486 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
CF+ ++ L V ++++ G L ++ +K P R+ A ++ AL YLH +
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLHE---RG 130
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
+I+RD+K N+LL + +L+D+G+ K T + GT Y+
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYI 177
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 486 CFE-DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
CF+ ++ L V ++++ G L ++ +K P R+ A ++ AL YLH +
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---RFYSA-EISLALNYLHE---RG 126
Query: 545 VIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYV 593
+I+RD+K N+LL + +L+D+G+ K T + GT Y+
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYI 173
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL++ + + G L + ++ AF E ++ + A+++LHS + HRDVK
Sbjct: 82 LLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVK 136
Query: 552 SSNILLS---DDFEPQLSDFGLAKWASTSSSHITC 583
N+L + D +L+DFG AK + ++ C
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC 171
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 492 LLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVK 551
LL++ + + G L + ++ AF E ++ + A+++LHS + HRDVK
Sbjct: 101 LLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVK 155
Query: 552 SSNILLS---DDFEPQLSDFGLAKWASTSSSHITC 583
N+L + D +L+DFG AK + ++ C
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC 190
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 423 NFLAENL-----IGKGGSSQVYKGC-LPDGKELAVKILKPS--EDVIKEFVLEIEIIT-T 473
+F AE+L IG+G V K P G+ +AVK ++ + E K+ +++++++ +
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 474 LHHKNIISLLGFCFEDNNLLLVYDFLSRG--SLEENLHGNKKD---PAAFGWSERYKVAM 528
I+ G F + + + + +S + ++ D G K+ +
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITL 132
Query: 529 GVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLA 571
+AL +L ++IHRD+K SNILL +L DFG++
Sbjct: 133 ATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 434 GSSQVYKGCLPD--GKELAVKILKPSEDVI-------KEFVLEIEIITTLHHKNIISLLG 484
G + K C G E A K +K + +E E+ I+ + H NII+L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+++L+ + +S G L + L + + E + + + YLH+ ++
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHT---KK 135
Query: 545 VIHRDVKSSNILLSDDFEP----QLSDFGLA 571
+ H D+K NI+L D P +L DFGLA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 429 LIGKGGSSQVYKGCLPDGK---ELAVKILKPSEDVIKEFVLEIEIITTLHHK------NI 479
+IGKG QV K D K +A+K+++ + ++ EI I+ L + N+
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 480 ISLL-GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
I +L F F N++ + ++ LS +L E + NK F K A + + L+ LH
Sbjct: 162 IHMLENFTFR-NHICMTFELLSM-NLYELIKKNKFQ--GFSLPLVRKFAHSILQCLDALH 217
Query: 539 SGSAQRVIHRDVKSSNILL 557
R+IH D+K NILL
Sbjct: 218 K---NRIIHCDLKPENILL 233
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPDG-KELAVKILKPSEDVIKE----FVLEIEIITTLHHK 477
+F +IG+G +V L + K A+KIL E + + F E +++ K
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 478 NIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVA-EALEY 536
I +L +DNNL LV D+ G L L +D + Y M +A +++
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFG 569
LH +HRD+K NIL+ + +L+DFG
Sbjct: 194 LH------YVHRDIKPDNILMDMNGHIRLADFG 220
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 429 LIGKGGSSQVYKGCLPDGK---ELAVKILKPSEDVIKEFVLEIEIITTLHHK------NI 479
+IGKG QV K D K +A+K+++ + ++ EI I+ L + N+
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 480 ISLL-GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
I +L F F N++ + ++ LS +L E + NK F K A + + L+ LH
Sbjct: 162 IHMLENFTFR-NHICMTFELLSM-NLYELIKKNKFQ--GFSLPLVRKFAHSILQCLDALH 217
Query: 539 SGSAQRVIHRDVKSSNILL 557
R+IH D+K NILL
Sbjct: 218 K---NRIIHCDLKPENILL 233
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 430 IGKGGSSQVYKGC-LPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHH-KNIISLLGFC 486
+G+G S+V++ + + +++ VKILKP ++ IK EI+I+ L NII+L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPNIITLAD-- 99
Query: 487 FEDNNLLLVYDFLSRGSLEENLHGNKKD-PAAFGWSERYKVAMGVAEALEYLHSGSAQRV 545
+V D +SR H N D + Y + + E L+ L + +
Sbjct: 100 -------IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 546 IHRDVKSSNILLSDDFEP-QLSDFGLAKWASTSSSH 580
+HRDVK N+++ + +L D+GLA++ +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 447 KEL-AVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLE 505
KEL AVK ++ + + EI +L H NI+ +L ++ ++ S G L
Sbjct: 45 KELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104
Query: 506 E---NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFE 562
E N +D A F + + + + Y HS ++ HRD+K N LL
Sbjct: 105 ERICNAGRFSEDEARFFFQQ-------LLSGVSYCHS---MQICHRDLKLENTLLDGSPA 154
Query: 563 PQLS--DFGLAKWASTSSSHITCTDVAGTFGYV 593
P+L DFG +K +S H GT Y+
Sbjct: 155 PRLKICDFGYSK---SSVLHSQPKSTVGTPAYI 184
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 429 LIGKGGSSQVYKGCLPDGK---ELAVKILKPSEDVIKEFVLEIEIITTLHHK------NI 479
+IGKG QV K D K +A+K+++ + ++ EI I+ L + N+
Sbjct: 104 VIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 480 ISLL-GFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLH 538
I +L F F N++ + ++ LS +L E + NK F K A + + L+ LH
Sbjct: 162 IHMLENFTFR-NHICMTFELLSM-NLYELIKKNKFQ--GFSLPLVRKFAHSILQCLDALH 217
Query: 539 SGSAQRVIHRDVKSSNILLS 558
R+IH D+K NILL
Sbjct: 218 K---NRIIHCDLKPENILLK 234
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 18/150 (12%)
Query: 449 LAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEE-- 506
+AVK ++ E + + EI +L H NI+ +L +V ++ S G L E
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 507 -NLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQL 565
N +D A F + + + + Y H A +V HRD+K N LL P+L
Sbjct: 107 CNAGRFSEDEARFFFQQ-------LISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 566 S--DFGLAKWASTSSSHITCTDVAGTFGYV 593
FG +K +S H GT Y+
Sbjct: 157 KICAFGYSK---SSVLHSQPKSTVGTPAYI 183
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 434 GSSQVYKGCLPD--GKELAVKILKPSEDVI-------KEFVLEIEIITTLHHKNIISLLG 484
G + K C G E A K +K + +E E+ I+ + H N+I+L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+++L+ + +S G L + L + + E + + + YLH+ ++
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHT---KK 135
Query: 545 VIHRDVKSSNILLSDDFEP----QLSDFGLA 571
+ H D+K NI+L D P +L DFGLA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 429 LIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEFV-LEIEIITTLHHKNIISLLGFCF 487
+IG G V++ L + E+A+K K +D K F E++I+ + H N++ L F +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIK--KVLQD--KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 488 EDNN------LLLVYDFLSRGSLEENLHGNK-KDPAAFGWSERYKVAMGVAEALEYLHSG 540
+ + L LV +++ + H K K + Y + +L Y+HS
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LRSLAYIHSI 160
Query: 541 SAQRVIHRDVKSSNILLSDDFEP-----QLSDFGLAK 572
+ HRD+K N+LL +P +L DFG AK
Sbjct: 161 G---ICHRDIKPQNLLL----DPPSGVLKLIDFGSAK 190
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 434 GSSQVYKGCLPD--GKELAVKILKPSEDVI-------KEFVLEIEIITTLHHKNIISLLG 484
G + K C G E A K +K + +E E+ I+ + H N+I+L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+++L+ + +S G L + L + E + + + YLH+ ++
Sbjct: 83 VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHT---KK 135
Query: 545 VIHRDVKSSNILLSDDFEP----QLSDFGLA 571
+ H D+K NI+L D P +L DFGLA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 434 GSSQVYKGCLPD--GKELAVKILKPSEDVI-------KEFVLEIEIITTLHHKNIISLLG 484
G + K C G E A K +K + +E E+ I+ + H N+I+L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+++L+ + +S G L + L + + E + + + YLH+ ++
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHT---KK 135
Query: 545 VIHRDVKSSNILLSDDFEP----QLSDFGLA 571
+ H D+K NI+L D P +L DFGLA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 434 GSSQVYKGCLPD--GKELAVKILKPSEDVI-------KEFVLEIEIITTLHHKNIISLLG 484
G + K C G E A K +K + +E E+ I+ + H N+I+L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+++L+ + +S G L + L + E + + + YLH+ ++
Sbjct: 83 VYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHT---KK 135
Query: 545 VIHRDVKSSNILLSDDFEP----QLSDFGLA 571
+ H D+K NI+L D P +L DFGLA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
VA+ +E+L ++++ IHRD+ + NILLS+ ++ DFGLA+
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 503 SLEENLHGNKKD 514
+L L + +
Sbjct: 111 NLSTYLRSKRNE 122
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
VA+ +E+L ++++ IHRD+ + NILLS+ ++ DFGLA+
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 503 SLEENLHGNKKD 514
+L L + +
Sbjct: 113 NLSTYLRSKRNE 124
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
VA+ +E+L ++++ IHRD+ + NILLS+ ++ DFGLA+
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 503 SLEENLHGNKKD 514
+L L + +
Sbjct: 118 NLSTYLRSKRNE 129
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 530 VAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK 572
VA+ +E+L ++++ IHRD+ + NILLS+ ++ DFGLA+
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 447 KELAVKILK--PSEDVIKEFVLEIEIITTL-HHKNIISLLGFCFEDNN-LLLVYDFLSRG 502
+ +AVK+LK + + + E++I+ + HH N+++LLG C + L+++ +F G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 503 SLEENLHGNKKD 514
+L L + +
Sbjct: 120 NLSTYLRSKRNE 131
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 434 GSSQVYKGCLPD--GKELAVKILKPSEDVI-------KEFVLEIEIITTLHHKNIISLLG 484
G + K C G E A K +K + +E E+ I+ + H N+I+L
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 485 FCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQR 544
+++L+ + +S G L + L + + E + + + YLH+ ++
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHT---KK 135
Query: 545 VIHRDVKSSNILLSDDFEP----QLSDFGLA 571
+ H D+K NI+L D P +L DFGLA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLH-HKNIISLLGF 485
++ +GG + VY+ + G+E A+K +L E+ + + E+ + L H NI+ F
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---F 91
Query: 486 CF------EDNNL----LLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALE 535
C E+++ L+ L +G L E L + K+ A++
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 536 YLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSH 580
++H +IHRD+K N+LLS+ +L DFG ++T+ SH
Sbjct: 151 HMHRQKPP-IIHRDLKVENLLLSNQGTIKLCDFG----SATTISH 190
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 467 EIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKV 526
EI I+ H+NI+ L L+++++F+S + E + + +AF +ER V
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI-----NTSAFELNEREIV 105
Query: 527 AM--GVAEALEYLHSGSAQRVIHRDVKSSNIL 556
+ V EAL++LHS + + H D++ NI+
Sbjct: 106 SYVHQVCEALQFLHSHN---IGHFDIRPENII 134
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 21/157 (13%)
Query: 423 NFLAENLIGKGGSSQVYKGCLPD-GKELAVKILKPSEDVIKE-----FVLEIEIITTLHH 476
+F +IG+G S+V + G+ A+KI+ D++K F E +++
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREERDVLVN-GD 119
Query: 477 KNIISLLGFCFEDNNLL-LVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMG---VAE 532
+ I+ L F F+D N L LV ++ G L L + FG ER M +AE
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL-------SKFG--ERIPAEMARFYLAE 170
Query: 533 ALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFG 569
+ + S +HRD+K NILL +L+DFG
Sbjct: 171 IVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 467 EIEIITTLHHKNIISL--LGFCFEDNNLLLVYDFLSRG-----SLEENLHGNKKDPAAFG 519
EI ++ L H N+ISL + D + L++D+ NKK P
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKK-PVQLP 126
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILL----SDDFEPQLSDFGLAKWAS 575
+ + + + YLH A V+HRD+K +NIL+ + +++D G A+ +
Sbjct: 127 RGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 576 TSSSHITCTD-VAGTFGY 592
+ + D V TF Y
Sbjct: 184 SPLKPLADLDPVVVTFWY 201
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 18/141 (12%)
Query: 429 LIGKGGSSQVYKGC-LPDGKELAVKILK--------PSEDVIK---EFVLEIEIITTLHH 476
L+GKGG V+ G L D ++A+K++ P D + E L ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 477 KNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEY 536
+I LL + +LV L R ++L + G V A+++
Sbjct: 98 PGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 537 LHSGSAQRVIHRDVKSSNILL 557
HS + V+HRD+K NIL+
Sbjct: 155 CHS---RGVVHRDIKDENILI 172
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 430 IGKGGSSQVYKGCLPDGK------ELAVKILKPSEDVIKEFVLEIEIITTLHHKNIISLL 483
IG+G VYKG + EL + L SE + F E E + L H NI+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER--QRFKEEAEXLKGLQHPNIVRFY 91
Query: 484 GFCFE-----DNNLLLVYDFLSRGSLEENLHGNK--KDPAAFGWSERYKVAMGVAEALEY 536
+E ++LV + + G+L+ L K K W + + + L++
Sbjct: 92 D-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQF 144
Query: 537 LHSGSAQRVIHRDVKSSNILLSDDF-EPQLSDFGLA 571
LH+ + +IHRD+K NI ++ ++ D GLA
Sbjct: 145 LHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 41/195 (21%)
Query: 425 LAENLIGKGGS-SQVYKGCLPDGKELAVKILKPSEDVIKEFVLEIEIIT-TLHHKNIIS- 481
++E ++G G S + V++G G+ +AVK + D ++EI+++T + H N+I
Sbjct: 18 VSEKILGYGSSGTVVFQGSF-QGRPVAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRY 74
Query: 482 --------LLGFCFEDNNLLLVYDFLSRGSLEENLHGNKK-DPAAFGWSERYKVAMGVAE 532
L E NL L S+ +ENL K+ +P + ++A GVA
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL----LRQIASGVA- 129
Query: 533 ALEYLHSGSAQRVIHRDVKSSNILLS-------------DDFEPQLSDFGLAKW--ASTS 577
+LHS ++IHRD+K NIL+S ++ +SDFGL K + S
Sbjct: 130 ---HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 578 SSHITCTDVAGTFGY 592
S + +GT G+
Sbjct: 184 SFRTNLNNPSGTSGW 198
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 24 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 136
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 137 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 23 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 82 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 135
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 136 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 56 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 114
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 115 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 168
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 169 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 208
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 43/172 (25%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEF---------VLEIEII 471
S + L+G GG VY G + D +A+K ++ +D I ++ +E+ ++
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 100
Query: 472 TTLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAF 518
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSF 154
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 155 FWQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 195
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 149
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 150 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 43/172 (25%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEF---------VLEIEII 471
S + L+G GG VY G + D +A+K ++ +D I ++ +E+ ++
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 81
Query: 472 TTLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAF 518
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSF 135
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 136 FWQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 149
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 150 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 23 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 82 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 135
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 136 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 148
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 149 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 149
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 150 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 37 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 149
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 150 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 148
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 149 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 24 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 136
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 137 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 148
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 149 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 36 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 148
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 149 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 43/172 (25%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEF---------VLEIEII 471
S + L+G GG VY G + D +A+K ++ +D I ++ +E+ ++
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 61
Query: 472 TTLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAF 518
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSF 115
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 116 FWQ--------VLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 43/172 (25%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEF---------VLEIEII 471
S + L+G GG VY G + D +A+K ++ +D I ++ +E+ ++
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 108
Query: 472 TTLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAF 518
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSF 162
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 163 FWQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 8 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL------ARSFF 120
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 121 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 51 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 163
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 164 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 43/172 (25%)
Query: 422 SNFLAENLIGKGGSSQVYKGC-LPDGKELAVKILKPSEDVIKEF---------VLEIEII 471
S + L+G GG VY G + D +A+K ++ +D I ++ +E+ ++
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 66
Query: 472 TTLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAF 518
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSF 120
Query: 519 GWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 121 FWQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 8 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 120
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 121 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 9 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 121
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 122 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 41/171 (23%)
Query: 422 SNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIKEF---------VLEIEIIT 472
S + L+G GG VY G + L V I +D I ++ +E+ ++
Sbjct: 4 SQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 473 TLH--HKNIISLLGFCFEDNNLLLV----------YDFLS-RGSLEENLHGNKKDPAAFG 519
+ +I LL + ++ +L+ +DF++ RG+L+E L +F
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL------ARSFF 116
Query: 520 WSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLS-DDFEPQLSDFG 569
W V EA+ + H+ V+HRD+K NIL+ + E +L DFG
Sbjct: 117 WQ--------VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,883,862
Number of Sequences: 62578
Number of extensions: 735047
Number of successful extensions: 3209
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 1761
Number of HSP's gapped (non-prelim): 1104
length of query: 611
length of database: 14,973,337
effective HSP length: 105
effective length of query: 506
effective length of database: 8,402,647
effective search space: 4251739382
effective search space used: 4251739382
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)