Your job contains 1 sequence.
>007255
MESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYG
PPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV
FIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR
RSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA
TMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKK
KLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAEL
YSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTE
MDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVG
DDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKE
EIDSYSSFMKSQSPKSSGRVESSTSRGSKNKKKKLVSVFSVTSCVVSIAILAAAKYFSTH
ANRTPNELVVT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007255
(611 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 2025 1.9e-209 1
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 1114 6.6e-113 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 1110 1.8e-112 1
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 1103 9.7e-112 1
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 779 1.9e-108 2
UNIPROTKB|F1SN45 - symbol:SPATA5L1 "Uncharacterized prote... 793 3.9e-108 2
UNIPROTKB|F6UUI0 - symbol:SPATA5L1 "Uncharacterized prote... 785 5.7e-107 2
UNIPROTKB|Q9BVQ7 - symbol:SPATA5L1 "Spermatogenesis-assoc... 791 1.5e-106 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 1050 4.0e-106 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 1050 4.0e-106 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 1050 4.0e-106 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 1050 4.0e-106 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 1050 4.0e-106 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 1050 4.0e-106 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 1048 6.5e-106 1
UNIPROTKB|A7YSY2 - symbol:SPATA5L1 "Spermatogenesis-assoc... 783 8.2e-106 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 1047 8.3e-106 1
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 769 1.1e-105 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 1042 2.8e-105 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 1041 3.6e-105 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 1039 5.8e-105 1
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 1037 9.5e-105 1
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 1028 8.6e-104 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 1027 1.1e-103 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 1027 1.1e-103 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 1024 2.3e-103 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 1024 2.3e-103 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 1023 2.9e-103 1
UNIPROTKB|E2QSC5 - symbol:SPATA5L1 "Uncharacterized prote... 1023 2.9e-103 1
RGD|1595990 - symbol:Spata5l1 "spermatogenesis associated... 756 9.5e-103 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 1006 1.8e-101 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 1006 1.8e-101 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 1005 2.3e-101 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 1003 3.8e-101 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 991 7.1e-100 1
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 628 1.1e-99 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 989 1.2e-99 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 987 1.9e-99 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 987 1.9e-99 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 981 8.2e-99 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 980 1.0e-98 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 980 1.0e-98 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 980 1.0e-98 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 980 1.0e-98 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 976 2.8e-98 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 976 2.8e-98 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 973 5.8e-98 1
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 628 1.1e-96 2
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 903 1.1e-95 2
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 516 3.5e-93 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 516 3.5e-93 2
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 907 5.7e-91 1
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 895 1.1e-89 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 894 1.4e-89 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 887 7.5e-89 1
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 482 2.4e-85 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 557 2.5e-85 2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 482 6.3e-85 3
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 477 1.3e-84 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 477 1.3e-84 2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 473 2.0e-84 2
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 490 1.3e-83 2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 482 4.8e-83 2
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 462 9.1e-83 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 488 1.2e-82 2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 460 3.9e-82 2
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 472 9.2e-82 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 454 1.7e-81 2
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 817 2.0e-81 1
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 472 4.3e-81 2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 470 4.4e-81 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 469 5.5e-81 2
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 794 5.4e-79 1
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 456 6.7e-79 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 472 5.9e-74 2
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 527 2.8e-66 2
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 527 2.8e-66 2
UNIPROTKB|P96281 - symbol:Rv0435c "Transitional endoplasm... 588 2.0e-65 2
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 403 8.2e-64 3
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 584 4.2e-61 2
UNIPROTKB|G4N5K9 - symbol:MGG_13203 "ATPase" species:2425... 604 7.3e-59 1
TAIR|locus:2159557 - symbol:PEX1 "peroxisome 1" species:3... 596 5.0e-57 1
UNIPROTKB|F8W938 - symbol:NVL "Nuclear valosin-containing... 376 5.0e-57 2
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 593 5.6e-57 1
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 593 5.6e-57 1
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 586 5.9e-57 1
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 592 6.8e-57 1
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 591 9.3e-57 1
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 590 1.2e-56 1
UNIPROTKB|E1BY08 - symbol:PEX1 "Uncharacterized protein" ... 593 1.6e-56 1
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 587 2.6e-56 1
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 582 9.0e-56 1
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 573 1.4e-55 1
FB|FBgn0035443 - symbol:CG12010 species:7227 "Drosophila ... 573 1.4e-55 1
RGD|1559939 - symbol:Pex1 "peroxisomal biogenesis factor ... 582 2.3e-55 1
DICTYBASE|DDB_G0272777 - symbol:DDB_G0272777 "AAA ATPase ... 478 1.7e-54 3
MGI|MGI:1918632 - symbol:Pex1 "peroxisomal biogenesis fac... 571 3.5e-54 1
UNIPROTKB|E9PE75 - symbol:PEX1 "Peroxisome biogenesis fac... 567 3.5e-54 1
GENEDB_PFALCIPARUM|PF14_0126 - symbol:PF14_0126 "hypothet... 395 3.9e-54 4
UNIPROTKB|Q8ILW7 - symbol:PF14_0126 "AAA family ATPase, p... 395 3.9e-54 4
WARNING: Descriptions of 603 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 2025 (717.9 bits), Expect = 1.9e-209, P = 1.9e-209
Identities = 413/600 (68%), Positives = 465/600 (77%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
NEKW+AE IGGN A++ALRELI FP Y +A+ LGLKWPRGLLLYGPPGTGKTSLVR
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AVV+EC AHL V+SPHSVH+AH GESEK LREAF++ASSHA+S KPSV+FIDEID LCPR
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query: 132 RDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
RD RREQDVRIASQLFTLMDSNKPS +S P VVVVASTNRVDAIDPALRR+GRFD
Sbjct: 135 RDARREQDVRIASQLFTLMDSNKPS-SSAPRVVVVASTNRVDAIDPALRRAGRFDALVEV 193
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R +IL+LYTKKV LD +VDL+AIA SCNGYVGADLEALCREAT+SA KRSSD+
Sbjct: 194 STPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDS 253
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIK 311
L +T +D++ A+SVVGPSI RG+TVEIPKVTW+D+GGL+DLKKKLQQAVEWPIK
Sbjct: 254 ------LILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIK 307
Query: 312 HSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEAL 371
HS AF ++GISP+RG LLHGPPGC AEL+SMYVGE EAL
Sbjct: 308 HSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEAL 367
Query: 372 LRNTFQRARLAAPSIIFFDEADVVGAKRGG-SSSTSITVGERLLSTLLTEMDGLEQAKGI 430
LRNTFQRARLA+PSIIFFDEADVV KRG SSS S TVGERLLSTLLTEMDGLE+AKGI
Sbjct: 368 LRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGI 427
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
LVLAATNRP+AIDAALMRPGRFDLVLYVPPPDLEAR EIL+VHTRNM +GDDVDLR IAE
Sbjct: 428 LVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAE 487
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEIDXXXXXXX 550
ET+LFTGAELEGLCRE+G V+LRE+I+ATAV NRHFQT K SLKPALT EE++
Sbjct: 488 ETDLFTGAELEGLCRESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEEVETYSSFRK 547
Query: 551 XXXXXXXGRVESSTSRGSKNKKKKLXXXXXXXXXXXXIAILAAAKYFSTHANRTPNELVV 610
R +S +K K + +LA Y+ H T +EL+V
Sbjct: 548 AAK-----RSDSKPIPINKKKATSTVFGFSWQLGVLSLLLLATGNYYFNH---TKHELLV 599
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 232/540 (42%), Positives = 337/540 (62%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRG+LLYGPPGTGKT
Sbjct: 343 EEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQNEVEKRVVASLLTLMDGIG-SEGSEGQVLVLGATNRPHALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L V+L +A S +GYVGADL+ALC EA + A+
Sbjct: 517 KEIEIGVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R + N + AG++ +T+ D+ + + PS R V +++P V+W DIGGL ++K
Sbjct: 577 RRVLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +F R+GI P +G LL+GPPGC G E
Sbjct: 637 LKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R F++AR +PSIIFFDE D + +RG SS V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSSGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKV 479
EMDG+EQ K + +LAATNRP ID ALMRPGR D ++YVP PD R EIL + +M +
Sbjct: 756 EMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPI 815
Query: 480 GDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTK 539
+DV+L + +T+ ++GAE+ +CREA ++AL EDI A ++ RHF ++ P ++K
Sbjct: 816 SNDVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQANSITRRHFTRALSTVTPRISK 875
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 230/538 (42%), Positives = 332/538 (61%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRG+LLYGPPGTGKT
Sbjct: 343 EQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEAKLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQNEVEKRVVASLLTLMDGIG-SEVSEGQVLVLGATNRPHALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L +L +A S +GYVGADL+ LC EA + A+
Sbjct: 517 KEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R N + AG++ +T++D+ A + + PS R + +++P V+W DIGGL +K
Sbjct: 577 RRILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +F R+GI P +G LL+GPPGC G E
Sbjct: 637 LKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R TF++AR APSIIFFDE D + +RG S V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKV 479
EMDG+EQ K + +LAATNRP ID ALMRPGR D ++YVP PD R EI ++ +M V
Sbjct: 756 EMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPV 815
Query: 480 GDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPAL 537
++VDL + +T+ ++GAE+ +CREA ++AL EDI A + RHF ++ P +
Sbjct: 816 SNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRI 873
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 230/538 (42%), Positives = 332/538 (61%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRGLLLYGPPGTGKT
Sbjct: 343 EQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQSEVEKRVVASLLTLMDGIG-SEGSEGRVLVLGATNRPQALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L +L +A + +GYVGADL+ALC EA + A+
Sbjct: 517 KEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R N + AG++ +T+ D+ + + PS R V +++P V+W DIGGL ++K
Sbjct: 577 RRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +F+R+GI P +G LL+GPPGC G E
Sbjct: 637 LKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R F++AR APSIIFFDE D + +RG SS V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKV 479
EMDG+EQ K + VLAATNRP ID ALMRPGR D ++YVP PD R EIL + +M +
Sbjct: 756 EMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPI 815
Query: 480 GDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPAL 537
++VDL + +T+ ++GAE+ +C+EA ++AL E+I A + RHF + P +
Sbjct: 816 SNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTPRI 873
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 779 (279.3 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 181/410 (44%), Positives = 239/410 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG +L+E+ITFPL Y ++LGL PRGLLL GPPG GKT LVR V ++ GA
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGAT 248
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ-D 139
L ++ V + GESE+ LR F QA A G P V+ IDEID+LCPRR +
Sbjct: 249 LVTVNGPEVTGSRPGESEENLRRVFEQARDAADDG-PCVLLIDEIDSLCPRRTGSSSAPE 307
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ +QL TLMD+ S V++ +TN+ D++DPALRR GRFD R
Sbjct: 308 NRLVAQLLTLMDAIG----SHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQR 363
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS-DANECAGVL 258
ILK +++PL +VDL +A GYVGADL AL REA + A++ S A+E
Sbjct: 364 RSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRHSQMGASE----- 418
Query: 259 SVTMEDWRHARSVVGPSITR---GVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
V+M+ + A V PS R G T + + WE IGGL D+K KL+Q++EWP++ A
Sbjct: 419 PVSMQHFMQALRHVQPSCLRSSIGAT-DFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEA 477
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F RLG+S RG LL+GPPGC GAEL+S YVG+SE L
Sbjct: 478 FVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQL 537
Query: 376 FQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F +AR APSI+F DE D +VG++ GSSS S +V ++LS LLTE+DG+
Sbjct: 538 FAQARACAPSIVFLDEVDSMVGSREDGSSS-SHSVQSQVLSVLLTELDGV 586
Score = 364 (133.2 bits), Expect = 8.7e-31, P = 8.7e-31
Identities = 105/351 (29%), Positives = 176/351 (50%)
Query: 203 LKLYTKKVPLDANVDLEAIATSCNG-YV--G--ADLEALCREATMSAVKRSSDANECAGV 257
LK++ +++ V ++ +G YV G DL + E V++ + ++ AG+
Sbjct: 100 LKVFVQRLEHKKRVSERSLQELLDGIYVHEGHLVDLSGVKAEIRCVLVEKVNSGSQRAGL 159
Query: 258 LSV-TMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAF 316
++ T D ++V + + + +V+ +GG+ D+ L++ + +P+++ +
Sbjct: 160 ITARTCVDISTIQTV------KHLDRQQQQVSAAPLGGMEDVFASLKEMITFPLRYPGSL 213
Query: 317 SRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTF 376
+LG+S RG LL GPPG G E+ GESE LR F
Sbjct: 214 RQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVF 273
Query: 377 QRARLAA---PSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVL 433
++AR AA P ++ DE D + +R GSSS RL++ LLT MD + +G +++
Sbjct: 274 EQARDAADDGPCVLLIDEIDSLCPRRTGSSSAP---ENRLVAQLLTLMDAIGSHEGFVII 330
Query: 434 AATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETE 493
ATN+P ++D AL RPGRFD + + P L R IL+ R M + DVDL ++AE T
Sbjct: 331 GATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMPLSPDVDLNTLAEMTC 390
Query: 494 LFTGAELEGLCREAGIVALRED-ISATA-VRNRHFQTVKDSLKPALTKEEI 542
+ GA+L L REA + A+R + A+ V +HF ++P+ + I
Sbjct: 391 GYVGADLSALSREAALQAMRHSQMGASEPVSMQHFMQALRHVQPSCLRSSI 441
Score = 313 (115.2 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 57/116 (49%), Positives = 88/116 (75%)
Query: 428 KGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRS 487
K +L++AATNRP A+D+AL+RPGR D ++YVPPPDL+AR +LR+ T+++ + DV L
Sbjct: 624 KDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLED 683
Query: 488 IAEETELFTGAELEGLCREAGIVALRED-ISATAVRNRHFQTVKDSLKPALTKEEI 542
+A +TELF+GA+LE LC+EA ++ALRED ++ + VR ++F L P+L+ E++
Sbjct: 684 LAAQTELFSGADLENLCKEAALLALREDGLAVSCVRQKYFLKALQMLSPSLSAEQL 739
Score = 203 (76.5 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 45/132 (34%), Positives = 73/132 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +P+ + +LG+ PRG+LLYGPPG KT+LV+A
Sbjct: 452 EQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSH 511
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + +VG+SEK L + F+QA + A PS+VF+DE+D++ R+
Sbjct: 512 CSFFSLSGAELFSPYVGDSEKTLAQLFAQARACA----PSIVFLDEVDSMVGSREDGSSS 567
Query: 139 DVRIASQLFTLM 150
+ SQ+ +++
Sbjct: 568 SHSVQSQVLSVL 579
Score = 177 (67.4 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 49/152 (32%), Positives = 75/152 (49%)
Query: 108 ASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIA-----SQLFTLMDSNKPSKTSVPH 162
+SSH++ + V + E+D + R RR +IA Q + + +
Sbjct: 566 SSSHSVQSQVLSVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCNKD 625
Query: 163 VVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIA 222
V++VA+TNR +A+D AL R GR D R +L++ TK VPL +V LE +A
Sbjct: 626 VLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLA 685
Query: 223 TSCNGYVGADLEALCREATMSAVKRSSDANEC 254
+ GADLE LC+EA + A++ A C
Sbjct: 686 AQTELFSGADLENLCKEAALLALREDGLAVSC 717
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 793 (284.2 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 174/412 (42%), Positives = 240/412 (58%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PLLY LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 199 EVPLGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREA 258
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGK-PSVVFIDEIDALCPRRD--H 134
GA L +S ++ A GE+E+ +R F +A L+G+ P+++F+DE+DALCPRR H
Sbjct: 259 GAELLAVSAPALQGARPGETEENVRRVFQRAQE--LAGRRPTLLFLDEVDALCPRRGGPH 316
Query: 135 RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ + R+ +Q+ TL+D + VVVV STNR DA+DPALRR GRFD
Sbjct: 317 QAPES-RVVAQVLTLLDGISGDR----EVVVVGSTNRPDALDPALRRPGRFDREVVIGTP 371
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC 254
R IL++ T K+P+ + VDL +A GYVGADL ALCREA M A+ S +
Sbjct: 372 TLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHALLHSGKNQDN 431
Query: 255 AGVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKH 312
+ + D+ A + PS R V +++ +TWE IGGL D K+KL+Q++EWP+K
Sbjct: 432 PLIDEI---DFLEAFKKIQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEWPLKF 488
Query: 313 STAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALL 372
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 489 PREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKIL 548
Query: 373 RNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
FQ+AR P+++F DE D + R S T V ER+LS LL E+DG+
Sbjct: 549 SQVFQQARANTPAVVFLDEIDSILGSRS-ISKTGCNVQERVLSVLLNELDGV 599
Score = 337 (123.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 79/224 (35%), Positives = 119/224 (53%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+ + +F+ LG++ RG LL GPPG
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R FQRA+ LA P+++F DE D + +RGG +
Sbjct: 262 LLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 409 VGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHE 468
R+++ +LT +DG+ + ++V+ +TNRP A+D AL RPGRFD + + P L R
Sbjct: 322 ---RVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKA 378
Query: 469 ILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
IL+V T M + VDL +AE T + GA+L LCREA + AL
Sbjct: 379 ILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHAL 422
Score = 296 (109.3 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 55/114 (48%), Positives = 85/114 (74%)
Query: 430 ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIA 489
++++AATNRP +D AL+RPGR D ++Y+PPPD ++R ILRV T+NM VG DV L ++A
Sbjct: 624 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLA 683
Query: 490 EETELFTGAELEGLCREAGIVALRED-ISATAVRNRHFQTVKDSLKPALTKEEI 542
ET LF+GA+L LC+EA ++AL+E+ + AT V+ HF ++KP+L+ +++
Sbjct: 684 AETCLFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSHKDL 737
Score = 280 (103.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 77/244 (31%), Positives = 122/244 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG A L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 466 EQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 525
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHA-----LSGKPSVVFIDEIDAL-CPRR 132
+S + VG+SEK L + F QA ++ L S++ I C +
Sbjct: 526 CSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKTGCNVQ 585
Query: 133 DH-----RREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
+ E D ++ + + D ++ + +V++VA+TNR D +D AL R GR
Sbjct: 586 ERVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIVAATNRPDVLDDALLRPGR 645
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
D R IL++ TK +P+ +V LE +A + GADL LC+EA + A
Sbjct: 646 LDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAETCLFSGADLGNLCKEAALLA 705
Query: 245 VKRS 248
++ +
Sbjct: 706 LQEN 709
Score = 43 (20.2 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 60 GPPGTGKTSLVRAVVRECGAHL 81
G GT + L A +R GAHL
Sbjct: 22 GDQGTQRCRLGPAALRSLGAHL 43
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 785 (281.4 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 177/411 (43%), Positives = 239/411 (58%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 233 EAPLGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 292
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD--HR 135
GA L +S ++ A GE+E+ +R F +A A G P+++F+DE+DALCPRR HR
Sbjct: 293 GAELLAVSAPALQGARPGETEENVRRVFGRARELASRG-PTLLFLDEVDALCPRRGGAHR 351
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ R +Q+ TL+D + + VVVVASTNR DA+DPALRR GRFD
Sbjct: 352 APES-RAVAQVLTLLDGIRGDRD----VVVVASTNRPDALDPALRRPGRFDREVVIGTPT 406
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
R IL++ T K+P+ + VDL +A GYVGADL ALCREA + A+ S + N+
Sbjct: 407 LKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHS-EKNKDN 465
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ T D+ A + PS R V ++I V WE IGGL D+K KL+Q++EWP+K
Sbjct: 466 PAIDET--DFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFP 523
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLR 373
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 524 REFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS 583
Query: 374 NTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F++AR P+I+F DE D + R S T V ER+LS LL E+DG+
Sbjct: 584 QVFRQARANTPAIVFLDEIDSILGSRS-ISKTECNVQERVLSVLLNELDGV 633
Score = 340 (124.7 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 79/224 (35%), Positives = 120/224 (53%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+++ + LG++ RG LL GPPG
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R F RAR LA+ P+++F DE D + +RGG+ +
Sbjct: 296 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 355
Query: 409 VGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHE 468
R ++ +LT +DG+ + ++V+A+TNRP A+D AL RPGRFD + + P L+ R
Sbjct: 356 ---RAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKA 412
Query: 469 ILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
IL+V T M + VDL +AE T + GA+L LCREA + AL
Sbjct: 413 ILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHAL 456
Score = 293 (108.2 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 54/116 (46%), Positives = 84/116 (72%)
Query: 428 KGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRS 487
+ ++++AATNRP +D AL+RPGR D ++Y+PPPD + R IL+V T+NM +G DV L +
Sbjct: 656 RNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLEN 715
Query: 488 IAEETELFTGAELEGLCREAGIVALRED-ISATAVRNRHFQTVKDSLKPALTKEEI 542
IA ET F+GA+L LC+EA ++AL+E+ + AT V+ HF ++KP+L+ E++
Sbjct: 716 IAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPEDL 771
Score = 278 (102.9 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 78/244 (31%), Positives = 120/244 (49%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 500 EQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 559
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHA-----LSGKPSVVFIDEIDAL-CPRR 132
+S + VG+SEK L + F QA ++ L S++ I C +
Sbjct: 560 CSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSRSISKTECNVQ 619
Query: 133 DH-----RREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
+ E D ++ + + D + + +V++VA+TNR D +D AL R GR
Sbjct: 620 ERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPGR 679
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
D R ILK+ TK +P+ +V LE IA + GADL LC+EA + A
Sbjct: 680 LDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCFFSGADLGNLCKEAALLA 739
Query: 245 VKRS 248
++ +
Sbjct: 740 LQEN 743
Score = 38 (18.4 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 63 GTGKTSLVRAVVRECGAHL 81
GT + L A +R GAHL
Sbjct: 59 GTQRCRLGPAALRALGAHL 77
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 791 (283.5 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
Identities = 176/410 (42%), Positives = 245/410 (59%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 199 EVPLGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 258
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
GA L +S ++ + GE+E+ +R F +A A G PS++F+DE+DALCP+R R
Sbjct: 259 GAELLAVSAPALQGSRPGETEENVRRVFQRARELASRG-PSLLFLDEMDALCPQRGSRAP 317
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ R+ +Q+ TL+D + VVVV +TNR DA+DPALRR GRFD
Sbjct: 318 ES-RVVAQVLTLLDGASGDR----EVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLK 372
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
R EIL++ T K+P+ ++VDL +A GYVGADL ALCREA M A+ S + N+ V
Sbjct: 373 QRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHS-EKNQDNPV 431
Query: 258 LSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
+ D+ A + PS R V ++I V WE+IGGL D+K KL+Q++EWP+K
Sbjct: 432 IDEI--DFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWE 489
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 490 FVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQI 549
Query: 376 FQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F++AR + P+I+F DE D ++GA+ +S T V ER+LS LL E+DG+
Sbjct: 550 FRQARASTPAILFLDEIDSILGAR--SASKTGCDVQERVLSVLLNELDGV 597
Score = 348 (127.6 bits), Expect = 6.6e-29, P = 6.6e-29
Identities = 83/224 (37%), Positives = 121/224 (54%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+++ A + LG++ RG LL GPPG
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R FQRAR LA+ PS++F DE D + +RG + S
Sbjct: 262 LLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAPES-- 319
Query: 409 VGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHE 468
R+++ +LT +DG + ++V+ ATNRP A+D AL RPGRFD + + P L+ R E
Sbjct: 320 ---RVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKE 376
Query: 469 ILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
IL+V T M + VDL +AE T + GA+L LCREA + AL
Sbjct: 377 ILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHAL 420
Score = 283 (104.7 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
Identities = 51/116 (43%), Positives = 82/116 (70%)
Query: 428 KGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRS 487
+ ++++AATNRP +D AL+RPGR D ++Y+PPPD + R IL+V T+ M +G DV L +
Sbjct: 620 RSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLEN 679
Query: 488 IAEETELFTGAELEGLCREAGIVALRED-ISATAVRNRHFQTVKDSLKPALTKEEI 542
+A ET F+GA+L LC EA ++AL+E+ + AT V+ HF ++KP+L+ +++
Sbjct: 680 LAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPSLSCKDL 735
Score = 275 (101.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 88/277 (31%), Positives = 133/277 (48%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 464 EEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 523
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQA--SSHALSGKPSVVFIDEIDALCPRRDHRR 136
+S + VG+SEK L + F QA S+ A+ + I + A +
Sbjct: 524 CSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSI--LGARSASKTGCD 581
Query: 137 EQDVRIASQLFTLMDS-------NKPSKTSVPH--------VVVVASTNRVDAIDPALRR 181
Q+ R+ S L +D + SK+S V+++A+TNR D +D AL R
Sbjct: 582 VQE-RVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLR 640
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R ILK+ TK +P+ +V LE +A + GADL LC EA
Sbjct: 641 PGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAA 700
Query: 242 MSAVKRSS-DANECAGVLSVTMEDWRHARSVVGPSIT 277
+ A++ + DA +V E + + V PS++
Sbjct: 701 LLALQENGLDAT------TVKQEHFLKSLKTVKPSLS 731
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 218/518 (42%), Positives = 314/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Score = 466 (169.1 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 337 (123.7 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 218/518 (42%), Positives = 314/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Score = 466 (169.1 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 337 (123.7 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 218/518 (42%), Positives = 314/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 222 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 281
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 282 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 337
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 338 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 393
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 394 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 453
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 454 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 513
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 514 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 573
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 574 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 633
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 634 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 693
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 694 MTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 731
Score = 466 (169.1 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 216 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 275
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 276 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 332
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 333 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 392
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 393 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 452
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 453 IDAEVMNSL--AVTMDD 467
Score = 337 (123.7 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 493 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 552
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 553 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 608
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 609 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 664 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 721
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 218/518 (42%), Positives = 314/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Score = 466 (169.1 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 337 (123.7 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 218/518 (42%), Positives = 314/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Score = 466 (169.1 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 337 (123.7 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 218/518 (42%), Positives = 314/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Score = 466 (169.1 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 337 (123.7 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 218/518 (42%), Positives = 313/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Score = 466 (169.1 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 334 (122.6 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++L+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 783 (280.7 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 176/416 (42%), Positives = 241/416 (57%)
Query: 13 EKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRA 72
E+ + E +GG A ++LREL+ PL Y LGL+ PRG+LL GPPG GKT LVRA
Sbjct: 194 EEPQPEVPLGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRA 253
Query: 73 VVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
V RE GA L +S ++ A GE+E+ +R F +A A S +P+++F+DE+DALCPRR
Sbjct: 254 VARETGAELLAVSAPALQGARPGETEENVRRIFKRARELA-SRRPTLLFLDEVDALCPRR 312
Query: 133 D--HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXX 190
H+ + R+ +Q+ TL+D + VVVV STNR DA+DPALRR GRFD
Sbjct: 313 GGPHQAPES-RVVAQVLTLLDGIGEDR----EVVVVGSTNRPDALDPALRRPGRFDREVV 367
Query: 191 XXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R IL++ T K+P+ VDL +A GYVGADL ALCREA M A+ S +
Sbjct: 368 IGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHS-E 426
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGV--TVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
N+ + T D+ A + PS R V +I V WE IGGL D+K KL+Q++EW
Sbjct: 427 KNQDNPTIDET--DFLEAFKKIQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEW 484
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGES 368
P+K F R+G++ +G LL+GPPGC GA+L+S +VG+S
Sbjct: 485 PLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDS 544
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
E +L F++AR P+I+F DE D + R S T V +R+LS LL E+DG+
Sbjct: 545 EKILSQVFRQARANTPAIVFLDEIDSILGSRS-ISRTECNVQDRVLSVLLNELDGV 599
Score = 342 (125.4 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 79/224 (35%), Positives = 120/224 (53%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+++ A + LG+ RG LL GPPG
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R F+RAR LA+ P+++F DE D + +RGG +
Sbjct: 262 LLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 409 VGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHE 468
R+++ +LT +DG+ + + ++V+ +TNRP A+D AL RPGRFD + + P L R
Sbjct: 322 ---RVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKA 378
Query: 469 ILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
IL+V T M + VDL +AE T + GA+L LCREA + AL
Sbjct: 379 ILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQAL 422
Score = 284 (105.0 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 62/160 (38%), Positives = 97/160 (60%)
Query: 387 IFFDEADVVGAK---RGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAID 443
+ +E D VG K R GS S ++L E + + ++V+AATNRP +D
Sbjct: 591 VLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSN-VIVVAATNRPDVLD 649
Query: 444 AALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGL 503
AL+RPGR D ++Y+PPPD + R IL+V T+N +G DV L +A ET F+GA+L L
Sbjct: 650 DALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNL 709
Query: 504 CREAGIVALRED-ISATAVRNRHFQTVKDSLKPALTKEEI 542
C+EA ++AL+E+ + T V+ HF ++KP+L+ +++
Sbjct: 710 CKEAALLALQENGLEVTTVKQEHFLESLKTVKPSLSHKDL 749
Score = 160 (61.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 41/116 (35%), Positives = 60/116 (51%)
Query: 162 HVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAI 221
+V+VVA+TNR D +D AL R GR D R ILK+ TK P+ +V LE +
Sbjct: 635 NVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKV 694
Query: 222 ATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSIT 277
A + GADL LC+EA + A++ + V +V E + + V PS++
Sbjct: 695 AAETCFFSGADLGNLCKEAALLALQENG-----LEVTTVKQEHFLESLKTVKPSLS 745
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 218/518 (42%), Positives = 313/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIENEIRRERERQT 715
Score = 465 (168.7 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 336 (123.3 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 85/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S + NE
Sbjct: 648 PDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NE 706
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 769 (275.8 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 174/399 (43%), Positives = 233/399 (58%)
Query: 29 EALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHS 88
E+L+E++ P + +KLGL P G+LL GPPG GKT LV+AV RE GA+L IS +
Sbjct: 207 ESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPA 266
Query: 89 VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ-DVRIASQLF 147
++ + GESE+ LR F + + G P+V+FIDEIDALCP+R + R+ +QL
Sbjct: 267 LYGSRPGESEENLRSVFEKGREMSCEG-PTVLFIDEIDALCPKRGSSNSAPEDRLVAQLL 325
Query: 148 TLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYT 207
TL+D +VVVA+TNR DA+DPALRR GRFD R IL++ T
Sbjct: 326 TLLDGVGRKD----RMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQMLT 381
Query: 208 KKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRH 267
+P+ ++DL +A GYVGADL ALCREA M AV SS + A VL + M D++
Sbjct: 382 CSMPISTDIDLVKLAEMTTGYVGADLTALCREAAMQAVFHSS--LDSAEVL-INMADFQE 438
Query: 268 ARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR 325
A + PS R E +TWE IGGL D+K KL+Q+VEWP+K AF+R+G++ +
Sbjct: 439 AFKKIQPSSFRSAIGLKECKPITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPK 498
Query: 326 GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPS 385
G LL+GP GC GAEL+S YVG+SE +L F++AR P+
Sbjct: 499 GVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPA 558
Query: 386 IIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
IIF DE D + R S S V ER+LS LL E+DG+
Sbjct: 559 IIFLDEIDSILGSRSHSKSGH-GVSERVLSVLLNELDGV 596
Score = 378 (138.1 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 94/279 (33%), Positives = 144/279 (51%)
Query: 275 SITRGVTVEIPKVTWED-----IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
+I +T+E ++ ED + GL D+ + L++ V+ P + F +LG+S G LL
Sbjct: 177 TIKEVITLERYRLLTEDTAKIPVAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLL 236
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR---LAAPSI 386
GPPG G LY GESE LR+ F++ R P++
Sbjct: 237 VGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTV 296
Query: 387 IFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAAL 446
+F DE D + KRG S+S +RL++ LLT +DG+ + ++V+AATNRP A+D AL
Sbjct: 297 LFIDEIDALCPKRGSSNSAP---EDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALDPAL 353
Query: 447 MRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCRE 506
RPGRFD + + P L R IL++ T +M + D+DL +AE T + GA+L LCRE
Sbjct: 354 RRPGRFDREVIIGTPTLTQRRSILQMLTCSMPISTDIDLVKLAEMTTGYVGADLTALCRE 413
Query: 507 AGIVALRE---DISATAVRNRHFQTVKDSLKPALTKEEI 542
A + A+ D + + FQ ++P+ + I
Sbjct: 414 AAMQAVFHSSLDSAEVLINMADFQEAFKKIQPSSFRSAI 452
Score = 297 (109.6 bits), Expect = 1.1e-105, Sum P(2) = 1.1e-105
Identities = 59/139 (42%), Positives = 97/139 (69%)
Query: 407 ITVGERLLSTLLTEMDGLEQ-AKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
+ V ER + L E++ E ++ +V+AATNRP +D AL+RPGR D V+Y+PPPDL+
Sbjct: 598 LKVTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKG 657
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED-ISATAVRNR 524
R IL++ T + + DV L+ IA T+LF+GA++E LC+EA ++AL+E+ + ATAV++
Sbjct: 658 RLSILKICTEKIPLDTDVSLQDIAARTDLFSGADIENLCKEAALLALQENGLEATAVKHG 717
Query: 525 HFQTVKDSLKPALTKEEID 543
HF ++KP+L+ ++++
Sbjct: 718 HFVKSLQTVKPSLSMKDLE 736
Score = 274 (101.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 78/254 (30%), Positives = 122/254 (48%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ + +P+ ++GL P+G+LLYGP G KT+LV+AV C
Sbjct: 463 EQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSCH 522
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQA------------------------SSHALS 114
+S + +VG+SEK L + F QA S H +S
Sbjct: 523 CSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSKSGHGVS 582
Query: 115 GKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+ V ++E+D + + RR +++ + +T +VVA+TNR D
Sbjct: 583 ERVLSVLLNELDGVGLKVTERRGNKLQLELEF---------QETLSRDFMVVAATNRPDM 633
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+D AL R GR D R ILK+ T+K+PLD +V L+ IA + + GAD+E
Sbjct: 634 LDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDIAARTDLFSGADIE 693
Query: 235 ALCREATMSAVKRS 248
LC+EA + A++ +
Sbjct: 694 NLCKEAALLALQEN 707
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 217/518 (41%), Positives = 313/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVD+ +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQT 715
Score = 465 (168.7 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 331 (121.6 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 84/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSIKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK +K P+ +VD++ +A NG+ GADL +C+ A A++ S + NE
Sbjct: 648 PDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NE 706
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 216/518 (41%), Positives = 312/518 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P +TWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R + DVDL +A+
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAK 677
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I R R QT
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIENEIRRERERQT 715
Score = 468 (169.8 bits), Expect = 9.7e-44, P = 9.7e-44
Identities = 103/257 (40%), Positives = 147/257 (57%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG+R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 337 (123.7 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 85/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNVGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSSKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S + NE
Sbjct: 648 PDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NE 706
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 218/520 (41%), Positives = 314/520 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGD--DVDLRSI 488
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFL 677
Query: 489 AEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
A+ T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 AKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 717
Score = 466 (169.1 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 103/257 (40%), Positives = 146/257 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 437 IDAEVMNSL--AVTMDD 451
Score = 327 (120.2 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 84/240 (35%), Positives = 122/240 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLD--ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 707
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 222/530 (41%), Positives = 321/530 (60%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
+IGG +A + +R+++ P + + PRG+LLYGPPGTGKT ++RAV E A
Sbjct: 280 SIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANA 339
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ I SV ++GE+E LR+ F A +H +PS++FIDEIDAL P+R + E
Sbjct: 340 QVFTIDGPSVVGKYLGETESRLRKIFEDARAH----QPSIIFIDEIDALAPKRTEDVSEA 395
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ R + L TL+D + VVV+A+TNR ++ID ALRR GR +
Sbjct: 396 ESRAVATLLTLLDG----MANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSA 451
Query: 199 RFEILKLYTKKVPLDAN-VDLEAIATSCNGYVGADLEALCREATMSAVKRS-SDANECAG 256
R +I+KL VP + N LE +A+ + YVGADL A+ REA + A+KR+ S + +G
Sbjct: 452 RLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSG 511
Query: 257 VL---SVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ +V M+D A S V S R +E P V W DIGG ++K+KL+++VEWP+ H
Sbjct: 512 LDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHG 571
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLR 373
FSRLG+ P +G LL+GPPGC G EL+ +VGESE +R
Sbjct: 572 ETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVR 631
Query: 374 NTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVL 433
FQ+AR A+PS+IFFDE D + A RG +S+ +R+++ LL E+DG+E + +LVL
Sbjct: 632 QVFQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALRNVLVL 686
Query: 434 AATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETE 493
AATNRP ID ALMRPGR D +LYV PP+ EAR +I+++ MK +DVDL IAE+TE
Sbjct: 687 AATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTE 746
Query: 494 LFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
+GAE+ LC+EAG++A+ ED+ A + HF+T +L+ A+T++ ++
Sbjct: 747 GCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDMLE 796
Score = 356 (130.4 bits), Expect = 9.4e-30, P = 9.4e-30
Identities = 90/271 (33%), Positives = 135/271 (49%)
Query: 248 SSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVE 307
SS E +L + ED + G T+ VT+ IGGL+ +++ VE
Sbjct: 237 SSMEIETPDLLKLPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVE 296
Query: 308 WPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGE 367
P ++ F I P RG LL+GPPG G + Y+GE
Sbjct: 297 LPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGE 356
Query: 368 SEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
+E+ LR F+ AR PSIIF DE D + KR S + + R ++TLLT +DG+ A
Sbjct: 357 TESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES---RAVATLLTLLDGMANA 413
Query: 428 KGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVG-DDVDLR 486
++V+AATNRP++ID AL RPGR + + + PD AR +I+++ + +D L
Sbjct: 414 GKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLE 473
Query: 487 SIAEETELFTGAELEGLCREAGIVALREDIS 517
+A T + GA+L + REA + A++ IS
Sbjct: 474 DLASRTHAYVGADLAAVVREAALRAIKRTIS 504
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 222/530 (41%), Positives = 320/530 (60%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
A+GG +E+L+ I PL + G+ PRG+LL+GPPGTGKT L+R V A
Sbjct: 246 AVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNA 305
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHRRE 137
H+ I+ S+ ++GE+E ALR+ F++A + +PS++FIDEID++ P R D E
Sbjct: 306 HVLTINGPSIVSKYLGETEAALRDIFNEARKY----QPSIIFIDEIDSIAPNRANDDSGE 361
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ R+ + L TLMD + VVV+A+TNR +++DPALRR GRFD
Sbjct: 362 VESRVVATLLTLMDG----MGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVD 417
Query: 198 XRFEILKLYTKKVPLDANV-DLEAI---ATSCNGYVGADLEALCREATMSAVKRS--SDA 251
RF+IL ++ D +V D EAI A+ +GYVGADL ALCRE+ M ++R +DA
Sbjct: 418 ARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDA 477
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIK 311
N L VT++D A + PS R + +E+PKV W DIGG +LK K+++ ++ P++
Sbjct: 478 NIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLE 537
Query: 312 HSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEAL 371
S F+RLGIS +G LL+GPPGC G E+++ YVGESE
Sbjct: 538 ASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERA 597
Query: 372 LRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGIL 431
+R F++AR AAPSIIFFDE D + R GSS+++ +L++LL E+DG+E+ KG++
Sbjct: 598 IREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA---ANHVLTSLLNEIDGVEELKGVV 654
Query: 432 VLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDD-VDLRSIAE 490
++AATNRP IDAAL+RPGR D +YV PPD+ AR EIL+ T+ + VDL +A+
Sbjct: 655 IVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELAD 714
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKE 540
TE ++GAE+ LC+EAG+ A+ ED+ V RHF+ + +T E
Sbjct: 715 RTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPE 764
Score = 398 (145.2 bits), Expect = 4.3e-35, P = 4.3e-35
Identities = 90/242 (37%), Positives = 132/242 (54%)
Query: 284 IPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+P+ +++ +GGL + L+ A+E P+ T FS G+SP RG LLHGPPG
Sbjct: 238 LPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLR 297
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G + S Y+GE+EA LR+ F AR PSIIF DE D + R
Sbjct: 298 VVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRAND 357
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
S + R+++TLLT MDG+ A ++V+AATNRP+++D AL RPGRFD + + PD
Sbjct: 358 DSGEVE--SRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPD 415
Query: 463 LEARHEILRVHTRNMK----VGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISA 518
++AR +IL M V D ++ IA +T + GA+L LCRE+ + ++ +
Sbjct: 416 VDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGT 475
Query: 519 TA 520
A
Sbjct: 476 DA 477
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 217/531 (40%), Positives = 313/531 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + +REL+ PL + + +G+K P+G+LLYGPPG GKT + RAV E GA
Sbjct: 204 IGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAF 263
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ + E +
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTQGEVE 319
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 320 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC----- 254
EI++++TK + LD VDLEA+A +GYVGADL ALC E+ + ++ D +
Sbjct: 376 LEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETI 435
Query: 255 -AGVL---SVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
A +L SVT + +R A ++ PS R VE+P TWEDIGGL +K++L++ V++P+
Sbjct: 436 SAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRETVQYPV 495
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+ P +G L +GPPGC G EL +M+ GESEA
Sbjct: 496 EHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 555
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D + RG S + G+R+++ +LTEMDG+ K +
Sbjct: 556 NVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNV 615
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PDL +R IL+ V DVDL + +
Sbjct: 616 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQ 675
Query: 491 ETELFTGAELEGLCREAGIVALRE----DISATAVRNRHFQTVK--DSLKP 535
+T+ F+GA+L +C+ A +A+RE DI +T R T DS+ P
Sbjct: 676 KTQGFSGADLTEICQRACKLAIRESIEKDIESTKARQESGDTKMEDDSVDP 726
Score = 465 (168.7 bits), Expect = 1.9e-43, P = 1.9e-43
Identities = 96/242 (39%), Positives = 139/242 (57%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G ++ R + +V ++DIGG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 185 GEAVKREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGP 244
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PGC G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 245 PGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 304
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D + KR T V R++S LLT MDGL+ ++V+ ATNRP++ID AL R GRF
Sbjct: 305 DSIAPKR---EKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRF 361
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + + PD R EI+R+HT+NMK+ + VDL ++A ET + GA+L LC E+ + +
Sbjct: 362 DREIDITIPDATGRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCI 421
Query: 513 RE 514
RE
Sbjct: 422 RE 423
Score = 328 (120.5 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 80/234 (34%), Positives = 117/234 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG LRE + +P+ + + +K G++ +G+L YGPPG GKT L +A+ EC
Sbjct: 475 EDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQ 534
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R +
Sbjct: 535 ANFISIKGPELLTMWFGESEANVRELFDKARQAA----PCVLFFDELDSIARSRGSSQGD 590
Query: 139 ----DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 591 AGGAGDRVINQILTEMDGMNAKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 646
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R ILK K P+ +VDLE + G+ GADL +C+ A A++ S
Sbjct: 647 DLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRES 700
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 217/523 (41%), Positives = 317/523 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 208 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANETGAF 267
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 268 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 323
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HVVV+A+TNR +++D ALRR GRFD R
Sbjct: 324 RRIVSQLLTLMDGLKQRA----HVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGR 379
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR----------SS 249
EIL+++TK + L +VDLE I+ +G+VGADL ALC EA + A+++ S
Sbjct: 380 LEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSI 439
Query: 250 DANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWP 309
DA + L+VTM+D++ A S PS R VE+P V WEDIGGL ++K++LQ+ V++P
Sbjct: 440 DA-DLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYP 498
Query: 310 IKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESE 369
+++ F + G++P RG L +GPPGC G EL +M+ GESE
Sbjct: 499 VEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESE 558
Query: 370 ALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG 429
A +R+ F +AR AAP I+FFDE D + RGG + + +R+++ +LTEMDG+ K
Sbjct: 559 ANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKN 618
Query: 430 ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIA 489
+ ++ ATNRP ID A++RPGR D ++Y+P PD+ +R ILR + R V DVDL ++
Sbjct: 619 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLS 678
Query: 490 EETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDS 532
+ TE F+GA+L +C+ A +A+RE I A R Q K++
Sbjct: 679 KITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKET 721
Score = 460 (167.0 bits), Expect = 7.2e-43, P = 7.2e-43
Identities = 96/231 (41%), Positives = 136/231 (58%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 203 IGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVAN 262
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 263 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTH 319
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
V R++S LLT MDGL+Q ++V+AATNRP+++DAAL R GRFD + + PD R
Sbjct: 320 GEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGR 379
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDIS 517
EIL++HT+NMK+ +DVDL I+ ET GA+L LC EA + A+R+ ++
Sbjct: 380 LEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMT 430
Score = 320 (117.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 80/238 (33%), Positives = 121/238 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ Y + K G+ RG+L YGPPG GKT L +A+ EC
Sbjct: 479 EDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQ 538
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +R+ F +A A P ++F DE+D++ R D
Sbjct: 539 ANFVSIKGPELLTMWFGESEANVRDVFDKARQAA----PCILFFDELDSIAKARGGGAGD 594
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD T+ +V ++ +TNR D IDPA+ R GR D
Sbjct: 595 AGGAAD-RVINQILTEMDG----MTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 649
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R IL+ +K P+ +VDL ++ G+ GADL +C+ A A++ + +A
Sbjct: 650 PDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEA 707
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 217/522 (41%), Positives = 311/522 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL----C-PRRDHR 135
+I+ + GESE LR+AF + +A P+++FIDE+DA+ C P
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEETEKNA----PAIIFIDELDAIASDDCFPSPQTH 321
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
E + RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD
Sbjct: 322 GEVERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 377
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA---- 251
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE 437
Query: 252 -----NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAV 306
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V
Sbjct: 438 DETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELV 497
Query: 307 EWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVG 366
++P++H F + G++P +G L +GPPGC G EL +M+ G
Sbjct: 498 QYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 557
Query: 367 ESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ 426
ESEA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+
Sbjct: 558 ESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST 617
Query: 427 AKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLR 486
K + ++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL
Sbjct: 618 KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLD 677
Query: 487 SIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
+A+ T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 678 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 719
Score = 453 (164.5 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 101/258 (39%), Positives = 145/258 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRG-GSSS 404
G E+ S GESE+ LR F+ AP+IIF DE D + + S
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQ 319
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
T V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 320 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 379
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 380 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 439
Query: 525 HFQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 440 TIDAEVMNSL--AVTMDD 455
Score = 334 (122.6 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 481 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 540
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 541 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 596
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 597 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S ++
Sbjct: 652 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES 709
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 211/514 (41%), Positives = 310/514 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + S + +G+K PRG+L+YGPPGTGKT + RAV E GA
Sbjct: 203 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAF 262
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A ++ P+++FIDEIDA+ P+RD E +
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNS----PAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S H++V+A+TNR ++IDPALRR GRFD R
Sbjct: 319 RRIVSQLLTLMDGMKKSS----HLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGR 374
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
E+L+++TK + L +VDLE IA +G+VGADL +LC EA + ++ D
Sbjct: 375 LEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKI 434
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R+A + PS R VE+P TW DIGGL +KK+LQ+ V++P+
Sbjct: 435 DAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPV 494
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 495 EHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 554
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R+ F +AR AAP ++FFDE D + RGG+ + +R+++ +LTEMDG+ K +
Sbjct: 555 NVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNV 614
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R + +VDL IA+
Sbjct: 615 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAK 674
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNR 524
T+ F+GA+L +C+ A +A+R+ I A R +
Sbjct: 675 VTQGFSGADLTEICQRACKLAIRQAIEAEIRREK 708
Score = 453 (164.5 bits), Expect = 4.1e-42, P = 4.1e-42
Identities = 94/228 (41%), Positives = 134/228 (58%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V ++DIGG R ++++ VE P++H + F +G+ P RG L++GPPG
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ A +P+IIF DE D + KR T
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR---DKTH 314
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
V R++S LLT MDG++++ ++V+AATNRP++ID AL R GRFD + + PD R
Sbjct: 315 GEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGR 374
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRE 514
E+LR+HT+NMK+ DDVDL IA E+ GA+L LC EA + +RE
Sbjct: 375 LEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIRE 422
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 220/536 (41%), Positives = 313/536 (58%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +REL+ PL + + +G+K PRG+L+YGPPGTGKT +
Sbjct: 216 ENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLM 275
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ + GESE LR+AF +A ++ P+++FIDEID++
Sbjct: 276 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFIDEIDSIA 331
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
P+R+ E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD
Sbjct: 332 PKREKTNGEVERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRFGRFDRE 387
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R EIL ++TK + L +VDLE IA +GYVG+DL +LC EA M ++
Sbjct: 388 VDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREK 447
Query: 249 SDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDL 298
D E L VTME++R+A V PS R V V E+P V WEDIGGL ++
Sbjct: 448 MDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEV 507
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
K++L ++V++P+ H F + G+SP RG L +GPPG G
Sbjct: 508 KRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGP 567
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
EL SM+ GESE+ +R+ F +AR AAP ++F DE D + RGGS + +R+++ LL
Sbjct: 568 ELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLL 627
Query: 419 TEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMK 478
TEMDG+ K + V+ ATNRP +DAAL+RPGR D ++YVP PD +R IL+ R
Sbjct: 628 TEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTP 687
Query: 479 VGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLK 534
V DVD+ IA +T F+GA+L + + A +A++E ISA R + + + +K
Sbjct: 688 VASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQREAAGEDVK 743
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 232/551 (42%), Positives = 326/551 (59%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 189 EAPLGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 248
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD--HR 135
GA L +S ++ A GE+E+ +R F +A A G P+++F+DE+DALCPRR HR
Sbjct: 249 GAELLAVSAPALQGARPGETEENVRRVFGRARELASRG-PTLLFLDEVDALCPRRGGAHR 307
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ R +Q+ TL+D + + VVVVASTNR DA+DPALRR GRFD
Sbjct: 308 APES-RAVAQVLTLLDGIRGDRD----VVVVASTNRPDALDPALRRPGRFDREVVIGTPT 362
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
R IL++ T K+P+ + VDL +A GYVGADL ALCREA + A+ S + N+
Sbjct: 363 LKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHS-EKNKDN 421
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ T D+ A + PS R V ++I V WE IGGL D+K KL+Q++EWP+K
Sbjct: 422 PAIDET--DFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFP 479
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALL- 372
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 480 REFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS 539
Query: 373 -RNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL------- 424
+ F++AR P+I+F DE D + R S T V ER+LS LL E+DG+
Sbjct: 540 QQKVFRQARANTPAIVFLDEIDSILGSRS-ISKTECNVQERVLSVLLNELDGVGLKTTER 598
Query: 425 ------EQA------KGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRV 472
+Q + ++++AATNRP +D AL+RPGR D ++Y+PPPD + R IL+V
Sbjct: 599 RGSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKV 658
Query: 473 HTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED-ISATAVRNRHFQTVKD 531
T+NM +G DV L +IA ET F+GA+L LC+EA ++AL+E+ + AT V+ HF
Sbjct: 659 CTKNMPMGPDVSLENIAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLK 718
Query: 532 SLKPALTKEEI 542
++KP+L+ E++
Sbjct: 719 TVKPSLSPEDL 729
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 756 (271.2 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 173/412 (41%), Positives = 239/412 (58%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 192 EVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 251
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
GA L +S ++ GE+E+ +R F +A A G PS++F+DE+DALCPRR +R
Sbjct: 252 GAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRG-PSLLFLDEVDALCPRRGGPQR 310
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ R+ +Q+ TL+D + VVVV +TNR D +DPALRR GRFD
Sbjct: 311 APESRVVAQVLTLLDGIHGDR----EVVVVGATNRPDELDPALRRPGRFDREVIIGTPTL 366
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAG 256
R IL + T K+P+ +++DL +A GYVGADL ALCREA A+ ++ + N+
Sbjct: 367 KQREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKN-EKNQNNP 425
Query: 257 VLSVTMEDWRHARSVVGPSITR---GVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ T D+ A V PS R G+T +I V WE IGGL D+K KL+Q VEWP+K
Sbjct: 426 KIEET--DFLEAFKKVQPSSFRSSIGLT-DIRPVGWEQIGGLEDVKLKLKQCVEWPLKFP 482
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLR 373
F+R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 483 QEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLS 542
Query: 374 NTFQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F++AR P+++F DE D V+G++ GSS ER+LS LL E+DG+
Sbjct: 543 QVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDAR--ERVLSVLLNELDGV 592
Score = 334 (122.6 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 84/235 (35%), Positives = 123/235 (52%)
Query: 282 VEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXX 340
VE P +VT +GGL + L++ + P+ + A + LG++ RG LL GPPG
Sbjct: 187 VEPPGEVT---LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQL 243
Query: 341 XXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGA 397
L GE+E +R FQRA+ LA+ PS++F DE D +
Sbjct: 244 VRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCP 303
Query: 398 KRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLY 457
+RGG + R+++ +LT +DG+ + ++V+ ATNRP +D AL RPGRFD +
Sbjct: 304 RRGGPQRAPES---RVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVI 360
Query: 458 VPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ P L+ R IL V T M + +DL +AE T + GA+L LCREA AL
Sbjct: 361 IGTPTLKQREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCAL 415
Score = 289 (106.8 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 84/273 (30%), Positives = 126/273 (46%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ + +PL + + ++GL P+GLLLYGPPG KT+LVRA+ C
Sbjct: 459 EQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCH 518
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHA-----LSGKPSVVFIDEIDAL-CPRR 132
+ + VG+SEK L + F QA ++ L SV+ + + C R
Sbjct: 519 CSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDAR 578
Query: 133 DH-----RREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
+ E D VR + + + + V++V +TNR D +D AL R GR
Sbjct: 579 ERVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGR 638
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
D R ILK+ T +P+ NV LE +A + GADL LC+EA + A
Sbjct: 639 LDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENLAAETCYFSGADLRNLCKEAALFA 698
Query: 245 VKRSSDANECAGVLSVTMEDWRHARSVVGPSIT 277
++ + +V E + A V PS+T
Sbjct: 699 LQENG-----LEATTVEQEHFTEALKTVKPSLT 726
Score = 282 (104.3 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 53/117 (45%), Positives = 81/117 (69%)
Query: 427 AKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLR 486
++ ++++ ATNRP +D AL+RPGR D ++YVPPPD E R IL+V T NM +G +V L
Sbjct: 614 SRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLE 673
Query: 487 SIAEETELFTGAELEGLCREAGIVALRED-ISATAVRNRHFQTVKDSLKPALTKEEI 542
++A ET F+GA+L LC+EA + AL+E+ + AT V HF ++KP+LT +++
Sbjct: 674 NLAAETCYFSGADLRNLCKEAALFALQENGLEATTVEQEHFTEALKTVKPSLTLKDL 730
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
Identities = 208/514 (40%), Positives = 308/514 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E GA
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E +
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTHGEVE 325
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 326 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC----- 254
E+L+++TK + L +VDLE ++ +GYVGADL ALC EA + ++ D +
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEI 441
Query: 255 -AGVLSVTMEDWRHARSVVG---PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
A +L+ H ++ +G PS R VE+P V+WEDIGGL ++K++LQ+ V++P+
Sbjct: 442 DAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPV 501
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+SP +G L +GPPGC G EL +M+ GESEA
Sbjct: 502 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 561
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR +AP ++FFDE D + +RG S + +R+L+ LLTEMDG+ K +
Sbjct: 562 NVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTV 621
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID AL+RPGR D ++Y+P PD E+R++I + R V DVDLR++A+
Sbjct: 622 FIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAK 681
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNR 524
T+ F+GA++ +C+ + A+RE+I + R
Sbjct: 682 YTQGFSGADITEICQRSCKYAIRENIEKDIEKER 715
Score = 466 (169.1 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 105/285 (36%), Positives = 155/285 (54%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G I R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 191 GEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D + KR T V R++S LLT MDGL+ ++V+ ATNRP++ID AL R GRF
Sbjct: 311 DSIAPKR---EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRF 367
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + + PD R E+LR+HT+NMK+ +DVDL ++++T + GA+L LC EA + +
Sbjct: 368 DREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCI 427
Query: 513 RE--DI-------------SATAVRNRHFQTVKDSLKPALTKEEI 542
RE D+ ++ AV N HFQT + P+ +E +
Sbjct: 428 REKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETV 472
Score = 337 (123.7 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 83/242 (34%), Positives = 123/242 (50%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +
Sbjct: 477 NVSW---EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ I + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 534 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 589
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D IDPAL R GR D
Sbjct: 590 RGNSVGDAGGAAD-RVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDPALLRPGRLD 644
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R++I K +K P+ +VDL A+A G+ GAD+ +C+ + A++
Sbjct: 645 QLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704
Query: 247 RS 248
+
Sbjct: 705 EN 706
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
Identities = 219/523 (41%), Positives = 310/523 (59%)
Query: 7 IMSEHNEKWKAE---EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPG 63
I E E AE + IGG R + +REL+ PL + + +G+K PRG+L+YGPPG
Sbjct: 209 INREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPG 268
Query: 64 TGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFID 123
TGKT + RAV E GA +I+ + GESE LR+AF +A ++ P+++FID
Sbjct: 269 TGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFID 324
Query: 124 EIDALCPRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRS 182
EID++ P+R+ E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR
Sbjct: 325 EIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRF 380
Query: 183 GRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATM 242
GRFD R EIL+++TK + L +VDLE IA +GYVG+DL +LC EA M
Sbjct: 381 GRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAM 440
Query: 243 SAVKRSSDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIG 293
++ D E L VTM+++R A PS R VE+P V WEDIG
Sbjct: 441 QQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIG 500
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++K++L++ V+ P+ ++ F R G++P +G L GPPG
Sbjct: 501 GLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFI 560
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL SM+ GESE+ +R+ F +AR AAP ++F DE D + RG S+ S G+R+
Sbjct: 561 SVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS-GGGDRV 619
Query: 414 LSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVH 473
++ LLTEMDG+ K + V+ ATNRP ID ALMRPGR D ++YVP PD EAR IL+
Sbjct: 620 VNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQ 679
Query: 474 TRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDI 516
R+ V +DVDLR++A+ T F+GA+LE + + A +A+++ I
Sbjct: 680 LRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSI 722
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 220/535 (41%), Positives = 310/535 (57%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +RE++ PL + + +G+K PRG+LLYGPPGTGKT +
Sbjct: 213 ENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLM 272
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ + GESE LR+AF +A ++ P+++FIDEID++
Sbjct: 273 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFIDEIDSIA 328
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
P+R+ E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD
Sbjct: 329 PKREKTNGEVERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRFGRFDRE 384
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R EIL+++TK + L +VDLE IA +GYVG+D+ ALC EA M ++
Sbjct: 385 VDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREK 444
Query: 249 SDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDL 298
D E L VTME++R A V PS R V V E+P V WEDIGGL ++
Sbjct: 445 MDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEV 504
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
K+ L++ V++P+ H F + G+SP RG L +GPPG G
Sbjct: 505 KQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGP 564
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
EL SM+ GESE+ +R+ F +AR AAP I+F DE D + RGGS + +R+++ LL
Sbjct: 565 ELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLL 624
Query: 419 TEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMK 478
TEMDG+ K + V+ ATNRP +D AL RPGR D ++YVP PD R IL+ R
Sbjct: 625 TEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTP 684
Query: 479 VGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSL 533
V DDVDL+ IA +T F+GA+L + + A +A++E I+A R + + + +
Sbjct: 685 VSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADINRTKALEAAGEDV 739
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 208/532 (39%), Positives = 313/532 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E GA
Sbjct: 209 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E +
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 325 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC----- 254
E+L+++TK + L +VDLE I+ +GYVGADL ALC EA + ++ D +
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 440
Query: 255 -AGVLSVTMEDWRHARSVVG---PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
A +L+ H + +G PS R VE+P V+WEDIGGL ++K++LQ+ V++P+
Sbjct: 441 DAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPV 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+SP +G L +GPPGC G EL +M+ GESEA
Sbjct: 501 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR +AP ++FFDE D + +RG S+ + +R+L+ LLTEMDG+ K +
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTV 620
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID+AL+RPGR D ++Y+P PD ++R I + R V DVD+ ++A+
Sbjct: 621 FIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAK 680
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEI 542
T+ F+GA++ +C+ A A+RE+I R ++++ + +E+
Sbjct: 681 YTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEV 732
Score = 465 (168.7 bits), Expect = 2.1e-43, P = 2.1e-43
Identities = 104/285 (36%), Positives = 155/285 (54%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 190 GEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 250 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D + KR T+ V R++S LLT MDGL+ ++V+ ATNRP++ID AL R GRF
Sbjct: 310 DSIAPKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRF 366
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + + PD R E+LR+HT+NMK+ +DVDL I+++T + GA+L LC EA + +
Sbjct: 367 DREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCI 426
Query: 513 RE--DI-------------SATAVRNRHFQTVKDSLKPALTKEEI 542
RE D+ ++ AV N HF T + P+ +E +
Sbjct: 427 REKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETV 471
Score = 323 (118.8 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 81/242 (33%), Positives = 120/242 (49%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +
Sbjct: 476 NVSW---EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 588
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D ID AL R GR D
Sbjct: 589 RGNSAGDAGGAAD-RVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDSALLRPGRLD 643
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I K +K P+ +VD+ A+A G+ GAD+ +C+ A A++
Sbjct: 644 QLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703
Query: 247 RS 248
+
Sbjct: 704 EN 705
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 206/507 (40%), Positives = 301/507 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E GA
Sbjct: 209 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E +
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 325 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
E+L+++TK + L +VDLE I+ +GYVGADL ALC EA + ++ D
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 440
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E ++VT E + A PS R VE+P V+W DIGGL ++K++LQ+ V++P+
Sbjct: 441 DAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPV 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+SP +G L +GPPGC G EL +M+ GESEA
Sbjct: 501 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS-TSITVGERLLSTLLTEMDGLEQAKG 429
+R F +AR +AP ++FFDE D + +RGG S +R+L+ LLTEMDG+ K
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKT 620
Query: 430 ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIA 489
+ ++ ATNRP ID+AL+RPGR D ++Y+P PD ++R I + R + DVD+ ++A
Sbjct: 621 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALA 680
Query: 490 EETELFTGAELEGLCREAGIVALREDI 516
+ T+ F+GA++ +C+ A A+RE+I
Sbjct: 681 KYTQGFSGADITEICQRACKYAIRENI 707
Score = 463 (168.0 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 104/285 (36%), Positives = 154/285 (54%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 190 GEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 250 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D + KR T+ V R++S LLT MDGL+ ++V+ ATNRP++ID AL R GRF
Sbjct: 310 DSIAPKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRF 366
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + + PD R E+LR+HT+NMK+ +DVDL I+++T + GA+L LC EA + +
Sbjct: 367 DREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCI 426
Query: 513 RE--DI-------------SATAVRNRHFQTVKDSLKPALTKEEI 542
RE D+ ++ AV N HF T + P+ +E +
Sbjct: 427 REKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETV 471
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 628 (226.1 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 120/298 (40%), Positives = 182/298 (61%)
Query: 246 KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQA 305
K+ + ++ ++M D A + V PS R V VEIPKV W DIGG +K+KL++A
Sbjct: 578 KQEENLQNLLSLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEA 637
Query: 306 VEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYV 365
+EWP+K+ +F R+GI P +G LL+GPPGC G EL S +V
Sbjct: 638 IEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWV 697
Query: 366 GESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
GESE +R+ F++AR +PSI+FFDE D + R G S ++ ER++S LLTEMDG++
Sbjct: 698 GESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGEGSGAV---ERVVSQLLTEMDGIQ 754
Query: 426 QAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDL 485
+ ++ ATNRP ID A++R GR D +LY+ PPDL+AR EI +H + + D+D+
Sbjct: 755 PLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDI 814
Query: 486 RSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
++ T+ ++GAE+ +CREA I A++EDI+A + HF + ++K +T+E +D
Sbjct: 815 NQLSILTDGYSGAEVTSICREASIAAMKEDINAKEINMSHFISAIGNVKKGITQEMLD 872
Score = 388 (141.6 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 85/234 (36%), Positives = 133/234 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L+E I +PL Y ++G+K P+G+LLYGPPG KT L +A+ E G +
Sbjct: 624 IGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLN 683
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + VGESE+A+R+ F +A ++ PS++F DEID L R V
Sbjct: 684 FIAVKGPELLSKWVGESERAVRDIFKKARQNS----PSILFFDEIDGLAISRSGEGSGAV 739
Query: 141 -RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL T MD +P + +V ++ +TNR D ID A+ R+GR D R
Sbjct: 740 ERVVSQLLTEMDGIQP----LTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDAR 795
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
EI ++ KKVP +++D+ ++ +GY GA++ ++CREA+++A+K +A E
Sbjct: 796 KEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAKE 849
Score = 381 (139.2 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 92/253 (36%), Positives = 134/253 (52%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG V+ +RELI + G+K P+G+LLYGPPGTGKT L R V +
Sbjct: 312 QSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTN 371
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
A L I+ + G +EK L++ F A+ + PS++FIDE+DALCP+R D+ E
Sbjct: 372 ATLFTINGADILDKFYGMTEKTLQKIFKDAAQKS----PSIIFIDELDALCPKREDNSSE 427
Query: 138 QDVRIASQLFTLMDS----------------NKPSKTSVPHVVVVASTNRVDAIDPALRR 181
+ RI L TLMD N V+V+ TNR D+ID ALRR
Sbjct: 428 VEKRIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGNCGGDKVIVIGCTNRPDSIDSALRR 487
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLD-ANVDLEAIATSCNGYVGADLEALCREA 240
GRFD R +IL ++ K+P + ++ IA+ +G+VGAD+E+LC+EA
Sbjct: 488 PGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMIASKTHGFVGADIESLCKEA 547
Query: 241 TMSAVKRSSDANE 253
++ R + N+
Sbjct: 548 SLKCFNRIKNENQ 560
Score = 176 (67.0 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 287 VTWEDIGGLRDLK-KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+ ++ IGGL DL+ K++++ ++ G+ P +G LL+GPPG
Sbjct: 309 LNFQSIGGL-DLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
GA++ + G +E L+ F+ A +PSIIF DE D + KR +SS
Sbjct: 368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSE 427
Query: 406 SITVGERLLSTLLTEMDGL 424
V +R++ +LLT MDG+
Sbjct: 428 ---VEKRIVGSLLTLMDGV 443
Score = 151 (58.2 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 430 ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDV---DLR 486
++V+ TNRP +ID+AL RPGRFD + + P+ + R +IL + K+ + + ++
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLS--KIPNQLTSQEIA 526
Query: 487 SIAEETELFTGAELEGLCREAGI 509
IA +T F GA++E LC+EA +
Sbjct: 527 MIASKTHGFVGADIESLCKEASL 549
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 213/536 (39%), Positives = 319/536 (59%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG +E L+ I PL + G+ PRG+LL+GPPGTGKT L+R V
Sbjct: 229 DQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSIT 288
Query: 79 -AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHR 135
AH+ I+ S+ ++GE+E A+R+ F++A +PS++F+DEID++ P R D
Sbjct: 289 EAHVLTINGPSIVSKYLGETENAIRDIFNEAKKF----QPSIIFMDEIDSIAPSRTSDDS 344
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
E + R+ +QL T+MD + +VV+ +TNR ++ID ALRR GRFD
Sbjct: 345 GETESRVVAQLLTVMDGMGDNG----RIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPD 400
Query: 196 XXXRFEIL-----KLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R EIL K+ ++K + ++ +IA+ +GYVGADL ALCRE+ M A+ R
Sbjct: 401 VEAREEILTKQFAKMNSEKCQITKE-EIASIASKTHGYVGADLTALCRESVMKAINRGLT 459
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
+ VT++D HA + PS R + +E+PKV W DIGG +LK+KL + V+ P+
Sbjct: 460 VGIPQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPL 519
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+ S +F LG+S +G LL+GPPGC G E+++ YVGESE
Sbjct: 520 EASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESER 579
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F++AR A+PSIIFFDE D + R G SST T +L++LL E+DG+E+ KG+
Sbjct: 580 AIREIFRKARAASPSIIFFDEIDAIAGDRDGDSST--TAASNVLTSLLNEIDGVEELKGV 637
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTR--NMKVGDD-VDLRS 487
+++ ATN+P ID AL+RPGR D +YV PPD +AR +IL+ +R N++ GD+ VDL+
Sbjct: 638 VIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDLQK 697
Query: 488 IAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
+AE T+ +GAE+ LC+EAG+ A+ E+ AT V N+HF+ + +T E ++
Sbjct: 698 LAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGISRGITPEMLE 753
Score = 384 (140.2 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 90/252 (35%), Positives = 138/252 (54%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX-XX 344
++T++ +GGL + L+ +E P+ + T FS GISP RG LLHGPPG
Sbjct: 225 QITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVA 284
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G + S Y+GE+E +R+ F A+ PSIIF DE D + R +S
Sbjct: 285 NSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSR--TSD 342
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
S R+++ LLT MDG+ I+V+ ATNRP++ID+AL RPGRFD + + PD+E
Sbjct: 343 DSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVE 402
Query: 465 ARHEIL-----RVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISAT 519
AR EIL ++++ ++ + ++ SIA +T + GA+L LCRE+ + A+ ++
Sbjct: 403 AREEILTKQFAKMNSEKCQITKE-EIASIASKTHGYVGADLTALCRESVMKAINRGLTVG 461
Query: 520 AVRNRHFQTVKD 531
+ TV D
Sbjct: 462 IPQTAIKVTVDD 473
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 204/506 (40%), Positives = 302/506 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E GA
Sbjct: 211 LGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAF 270
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF++ ++ P+++FIDEIDA+ P+R+ E +
Sbjct: 271 FFLINGPEIMSKMSGESESNLRKAFAECEKNS----PAILFIDEIDAIAPKREKAHGEVE 326
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD KT HVVV+A+TNR ++ID ALRR GRFD R
Sbjct: 327 KRIVSQLLTLMDG---LKTRA-HVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 382
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A C+G+VGADL +LC EA + ++ +
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTI 442
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 443 DAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 502
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 503 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 562
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R+ F +AR AAP ++FFDE D + RGGS + +R+++ +LTEMDG+ K +
Sbjct: 563 NVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNV 622
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD +R +I + R + D+DL +A+
Sbjct: 623 FIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAK 682
Query: 491 ETELFTGAELEGLCREAGIVALREDI 516
T F+GA+L +C+ A +A+RE I
Sbjct: 683 NTVGFSGADLTEICQRACKLAIRESI 708
Score = 447 (162.4 bits), Expect = 1.9e-41, P = 1.9e-41
Identities = 98/243 (40%), Positives = 137/243 (56%)
Query: 273 GPSITRGVTVE-IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
G I R E + +V ++D+GG+R ++++ VE P++H F +G+ P RG LL G
Sbjct: 191 GDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFG 250
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G E+ S GESE+ LR F +P+I+F DE
Sbjct: 251 PPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDE 310
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D + KR + V +R++S LLT MDGL+ ++V+AATNRP++ID AL R GR
Sbjct: 311 IDAIAPKREKAHGE---VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGR 367
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
FD + + PD R EILR+HT+NMK+G+DVDL +A E F GA+L LC EA I
Sbjct: 368 FDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQ 427
Query: 512 LRE 514
+RE
Sbjct: 428 IRE 430
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 204/506 (40%), Positives = 302/506 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E GA
Sbjct: 211 LGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAF 270
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF++ ++ P+++FIDEIDA+ P+R+ E +
Sbjct: 271 FFLINGPEIMSKMSGESESNLRKAFAECEKNS----PAILFIDEIDAIAPKREKAHGEVE 326
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD KT HVVV+A+TNR ++ID ALRR GRFD R
Sbjct: 327 KRIVSQLLTLMDG---LKTRA-HVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 382
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A C+G+VGADL +LC EA + ++ +
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTI 442
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 443 DAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 502
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 503 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 562
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R+ F +AR AAP ++FFDE D + RGGS + +R+++ +LTEMDG+ K +
Sbjct: 563 NVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNV 622
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++ ATNRP ID A++RPGR D ++Y+P PD +R +I + R + D+DL +A+
Sbjct: 623 FIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAK 682
Query: 491 ETELFTGAELEGLCREAGIVALREDI 516
T F+GA+L +C+ A +A+RE I
Sbjct: 683 NTVGFSGADLTEICQRACKLAIRESI 708
Score = 447 (162.4 bits), Expect = 1.9e-41, P = 1.9e-41
Identities = 98/243 (40%), Positives = 137/243 (56%)
Query: 273 GPSITRGVTVE-IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
G I R E + +V ++D+GG+R ++++ VE P++H F +G+ P RG LL G
Sbjct: 191 GDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFG 250
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G E+ S GESE+ LR F +P+I+F DE
Sbjct: 251 PPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDE 310
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D + KR + V +R++S LLT MDGL+ ++V+AATNRP++ID AL R GR
Sbjct: 311 IDAIAPKREKAHGE---VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGR 367
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
FD + + PD R EILR+HT+NMK+G+DVDL +A E F GA+L LC EA I
Sbjct: 368 FDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQ 427
Query: 512 LRE 514
+RE
Sbjct: 428 IRE 430
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 208/519 (40%), Positives = 304/519 (58%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +RE++ PL + + +G+K PRG+L+YGPPGTGKT +
Sbjct: 205 ENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLM 264
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ V GESE LR+AF +A +A P+++FIDEID++
Sbjct: 265 ARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNA----PAIIFIDEIDSIA 320
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
P+RD E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD
Sbjct: 321 PKRDKTNGEVERRVVSQLLTLMDGMKARS----NVVVIAATNRPNSIDPALRRFGRFDRE 376
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R E+L+++TK + L +VDLEA+A +GYVGAD+ +LC EA M ++
Sbjct: 377 VDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREK 436
Query: 249 SDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
D E L VTM+++R A PS R VE VTW+D+GGL ++K
Sbjct: 437 MDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIK 496
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
++L++ VE+P+ H +++ G+SP +G L +GPPG G E
Sbjct: 497 EELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPE 556
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L SM+ GESE+ +R+ F +AR AAP+++F DE D + RGGS + +R+++ LLT
Sbjct: 557 LLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLT 616
Query: 420 EMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKV 479
EMDG+ K + V+ ATNRP ID A++RPGR D ++YVP PD AR IL R +
Sbjct: 617 EMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPL 676
Query: 480 GDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISA 518
++L +IA+ T+ F+GA+L + + A A+++ I A
Sbjct: 677 EPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEA 715
Score = 349 (127.9 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 88/251 (35%), Positives = 129/251 (51%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W + +GG E L+E + +P+L+ Q K GL +G+L YGPPGTGK
Sbjct: 478 VVESVNVTW---DDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGK 534
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +AV E A+ + + GESE +R+ F +A + A P+VVF+DE+D
Sbjct: 535 TLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA----PTVVFLDELD 590
Query: 127 ALCPRR-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
++ R D D R+ +QL T MD K +V V+ +TNR D IDPA+ R
Sbjct: 591 SIAKARGGSLGDAGGASD-RVVNQLLTEMDGMNAKK----NVFVIGATNRPDQIDPAILR 645
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R IL +K PL+ ++L AIA + G+ GADL + + A
Sbjct: 646 PGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAA 705
Query: 242 MSAVKRSSDAN 252
A+K S +A+
Sbjct: 706 KYAIKDSIEAH 716
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 211/533 (39%), Positives = 308/533 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +REL+ PL + + +G+K P+G+L+YGPPGTGKT + RAV E GA
Sbjct: 217 IGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAF 276
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A ++ PS++FIDEID++ P+RD E +
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PSIIFIDEIDSIAPKRDKTNGEVE 332
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 333 RRVVSQLLTLMDGMKARS----NVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLEAIA+ +G+VGAD+ +LC EA M ++ D
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETI 448
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L VT +++R A PS R VE VTW+DIGGL ++K +L++ VE+P+
Sbjct: 449 DTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPV 508
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H + + G++P +G L GPPG G EL SM+ GESE+
Sbjct: 509 LHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R+ F +AR AAP+++F DE D + RGGS + +R+++ LLTEMDG+ K +
Sbjct: 569 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNV 628
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
V+ ATNRP ID AL+RPGR D ++YVP PD AR IL+ RN + +DL IA+
Sbjct: 629 FVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAK 688
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
T F+GA+L + + + A+++ I A N+ +K+ K + E++D
Sbjct: 689 ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINK----IKEE-KEKVKTEDVD 736
Score = 469 (170.2 bits), Expect = 8.4e-44, P = 8.4e-44
Identities = 101/249 (40%), Positives = 143/249 (57%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG + ++++ VE P++H F +GI P +G L++GPPG
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A +PSIIF DE D + KR T
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR---DKT 327
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
+ V R++S LLT MDG++ ++V+AATNRP++ID AL R GRFD + + PD E
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EILR+HT+NMK+ DDVDL +IA ET F GA++ LC EA + +RE + +
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEET 447
Query: 526 FQT-VKDSL 533
T V +SL
Sbjct: 448 IDTEVLNSL 456
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 211/533 (39%), Positives = 308/533 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +REL+ PL + + +G+K P+G+L+YGPPGTGKT + RAV E GA
Sbjct: 217 IGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAF 276
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A ++ PS++FIDEID++ P+RD E +
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PSIIFIDEIDSIAPKRDKTNGEVE 332
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 333 RRVVSQLLTLMDGMKARS----NVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLEAIA+ +G+VGAD+ +LC EA M ++ D
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETI 448
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L VT +++R A PS R VE VTW+DIGGL ++K +L++ VE+P+
Sbjct: 449 DTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPV 508
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H + + G++P +G L GPPG G EL SM+ GESE+
Sbjct: 509 LHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R+ F +AR AAP+++F DE D + RGGS + +R+++ LLTEMDG+ K +
Sbjct: 569 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNV 628
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
V+ ATNRP ID AL+RPGR D ++YVP PD AR IL+ RN + +DL IA+
Sbjct: 629 FVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAK 688
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
T F+GA+L + + + A+++ I A N+ +K+ K + E++D
Sbjct: 689 ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINK----IKEE-KEKVKTEDVD 736
Score = 469 (170.2 bits), Expect = 8.4e-44, P = 8.4e-44
Identities = 101/249 (40%), Positives = 143/249 (57%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG + ++++ VE P++H F +GI P +G L++GPPG
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A +PSIIF DE D + KR T
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR---DKT 327
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
+ V R++S LLT MDG++ ++V+AATNRP++ID AL R GRFD + + PD E
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EILR+HT+NMK+ DDVDL +IA ET F GA++ LC EA + +RE + +
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEET 447
Query: 526 FQT-VKDSL 533
T V +SL
Sbjct: 448 IDTEVLNSL 456
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 203/507 (40%), Positives = 303/507 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E G+
Sbjct: 212 LGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSF 271
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GESE LR+AF + + +P+++FIDEIDA+ P+R+ E +
Sbjct: 272 FFLINGPEVMSKMSGESESNLRKAFEECEKN----QPAILFIDEIDAIAPKREKTNGEVE 327
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K ++VV+A+TNR ++ID ALRR GRFD R
Sbjct: 328 RRIVSQLLTLMDGVKGRS----NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 383
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE IA C+G+VGADL +LC EA + ++ +
Sbjct: 384 LEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQI 443
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A+ PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 444 DAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 503
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 504 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 563
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVG-AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG 429
+R+ F +AR AAP ++FFDE D + A+ GG+ +R+++ +LTEMDG+ K
Sbjct: 564 NVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN 623
Query: 430 ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIA 489
+ ++ ATNRP ID A++RPGR D ++Y+P PD +RH+IL+ R + D+DL +A
Sbjct: 624 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLA 683
Query: 490 EETELFTGAELEGLCREAGIVALREDI 516
+ T F+GA+L +C+ A +A+RE I
Sbjct: 684 KNTVGFSGADLTEICQRACKLAIRESI 710
Score = 446 (162.1 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 100/255 (39%), Positives = 141/255 (55%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ ++D+GG+R ++++ VE P++H F +GI P RG LL GPPG
Sbjct: 207 IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVAN 266
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ P+I+F DE D + KR T+
Sbjct: 267 ETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR---EKTN 323
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
V R++S LLT MDG++ ++V+AATNRP++ID AL R GRFD + + PD R
Sbjct: 324 GEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 383
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHF 526
EILR+HT+NMK+ DDVDL IA E F GA+L LC EA + +RE + + +
Sbjct: 384 LEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQI 443
Query: 527 QT-VKDSLKPALTKE 540
V +SL A+T E
Sbjct: 444 DAEVLNSL--AVTME 456
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 203/507 (40%), Positives = 303/507 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E G+
Sbjct: 212 LGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSF 271
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GESE LR+AF + + +P+++FIDEIDA+ P+R+ E +
Sbjct: 272 FFLINGPEVMSKMSGESESNLRKAFEECEKN----QPAILFIDEIDAIAPKREKTNGEVE 327
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K ++VV+A+TNR ++ID ALRR GRFD R
Sbjct: 328 RRIVSQLLTLMDGVKGRS----NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 383
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE IA C+G+VGADL +LC EA + ++ +
Sbjct: 384 LEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQI 443
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A+ PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 444 DAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 503
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 504 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 563
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVG-AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG 429
+R+ F +AR AAP ++FFDE D + A+ GG+ +R+++ +LTEMDG+ K
Sbjct: 564 NVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN 623
Query: 430 ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIA 489
+ ++ ATNRP ID A++RPGR D ++Y+P PD +RH+IL+ R + D+DL +A
Sbjct: 624 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLA 683
Query: 490 EETELFTGAELEGLCREAGIVALREDI 516
+ T F+GA+L +C+ A +A+RE I
Sbjct: 684 KNTVGFSGADLTEICQRACKLAIRESI 710
Score = 446 (162.1 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 100/255 (39%), Positives = 141/255 (55%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ ++D+GG+R ++++ VE P++H F +GI P RG LL GPPG
Sbjct: 207 IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVAN 266
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ P+I+F DE D + KR T+
Sbjct: 267 ETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR---EKTN 323
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
V R++S LLT MDG++ ++V+AATNRP++ID AL R GRFD + + PD R
Sbjct: 324 GEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 383
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHF 526
EILR+HT+NMK+ DDVDL IA E F GA+L LC EA + +RE + + +
Sbjct: 384 LEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQI 443
Query: 527 QT-VKDSLKPALTKE 540
V +SL A+T E
Sbjct: 444 DAEVLNSL--AVTME 456
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 207/514 (40%), Positives = 298/514 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +RE+I PL + + LG+K PRG+LLYGPPG+GKT + RAV E GA
Sbjct: 209 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GE+E LR AF +A ++ P+++FIDEID++ P+R+ E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNS----PAIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K S VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 325 RRVVSQLLTLMDGIK----SRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
FEIL+++TK + L +V LE +A++ +G+VGADL LC EA ++ ++ D
Sbjct: 381 FEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEII 440
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E + VT + + A PS R VE+P V W+DIGGL ++K L++ + +PI
Sbjct: 441 DKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPI 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H F + G+SP RG L +GPPGC G EL +M+ GESEA
Sbjct: 501 DHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D +G +RG S G+R+++ LLTE+DG+ K +
Sbjct: 561 NVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNL 620
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
+ ATNRP +D AL+RPGR D ++Y+P PDL AR IL R V ++V + +A+
Sbjct: 621 FFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQ 680
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+T F+GA+L LC+ A A+R+ I A + +
Sbjct: 681 KTAGFSGADLAELCQRAARAAIRDAIDAEEMNKK 714
Score = 438 (159.2 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 94/242 (38%), Positives = 135/242 (55%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G I R ++ ++ ++DIGG + ++++ +E P++H F LG+ P RG LL+GP
Sbjct: 190 GDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GE+EA LR F+ A +P+IIF DE
Sbjct: 250 PGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D + KR T+ V R++S LLT MDG++ ++V+AATNR ++ID AL R GRF
Sbjct: 310 DSIAPKR---EKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRF 366
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + + PD R EILR+HT+NMK+ DV L +A T F GA+L LC EA + +
Sbjct: 367 DREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCI 426
Query: 513 RE 514
RE
Sbjct: 427 RE 428
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 207/514 (40%), Positives = 298/514 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +RE+I PL + + LG+K PRG+LLYGPPG+GKT + RAV E GA
Sbjct: 209 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GE+E LR AF +A ++ P+++FIDEID++ P+R+ E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNS----PAIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K S VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 325 RRVVSQLLTLMDGIK----SRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
FEIL+++TK + L +V LE +A++ +G+VGADL LC EA ++ ++ D
Sbjct: 381 FEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEII 440
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E + VT + + A PS R VE+P V W+DIGGL ++K L++ + +PI
Sbjct: 441 DKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPI 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H F + G+SP RG L +GPPGC G EL +M+ GESEA
Sbjct: 501 DHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F +AR AAP ++FFDE D +G +RG S G+R+++ LLTE+DG+ K +
Sbjct: 561 NVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNL 620
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
+ ATNRP +D AL+RPGR D ++Y+P PDL AR IL R V ++V + +A+
Sbjct: 621 FFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQ 680
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+T F+GA+L LC+ A A+R+ I A + +
Sbjct: 681 KTAGFSGADLAELCQRAARAAIRDAIDAEEMNKK 714
Score = 438 (159.2 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 94/242 (38%), Positives = 135/242 (55%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G I R ++ ++ ++DIGG + ++++ +E P++H F LG+ P RG LL+GP
Sbjct: 190 GDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GE+EA LR F+ A +P+IIF DE
Sbjct: 250 PGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D + KR T+ V R++S LLT MDG++ ++V+AATNR ++ID AL R GRF
Sbjct: 310 DSIAPKR---EKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRF 366
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + + PD R EILR+HT+NMK+ DV L +A T F GA+L LC EA + +
Sbjct: 367 DREIDIGVPDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCI 426
Query: 513 RE 514
RE
Sbjct: 427 RE 428
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 210/517 (40%), Positives = 300/517 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+I+ + GE E A R+ S A K + +F + D P E +
Sbjct: 266 FFLINGPEIMSKLAGEGESACRKKISPAPPPL---KTAGIF--KSDDCFPSPQTHGEVER 320
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 321 RIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 376
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA--------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 377 EILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETID 436
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIK 311
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P++
Sbjct: 437 AEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 496
Query: 312 HSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEAL 371
H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 497 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 556
Query: 372 LRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGIL 431
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K +
Sbjct: 557 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVF 616
Query: 432 VLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEE 491
++ ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+
Sbjct: 617 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKM 676
Query: 492 TELFTGAELEGLCREAGIVALREDISATAVRNRHFQT 528
T F+GA+L +C+ A +A+RE I + R R QT
Sbjct: 677 TNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 713
Score = 390 (142.3 bits), Expect = 6.6e-34, P = 6.6e-34
Identities = 93/257 (36%), Positives = 134/257 (52%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GE E+ R A + F D S T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFP-----SPQT 314
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
V R++S LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD
Sbjct: 315 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 374
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRH 525
R EIL++HT+NMK+ DDVDL +A ET GA+L LC EA + A+R+ + + +
Sbjct: 375 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 434
Query: 526 FQT-VKDSLKPALTKEE 541
V +SL A+T ++
Sbjct: 435 IDAEVMNSL--AVTMDD 449
Score = 334 (122.6 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 475 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 534
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 535 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 590
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 591 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S ++
Sbjct: 646 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES 703
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 628 (226.1 bits), Expect = 1.1e-96, Sum P(2) = 1.1e-96
Identities = 121/278 (43%), Positives = 171/278 (61%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
LSV ED+ +A++ + PS R V +E+PKV WED+GG ++K +L +AVEWP KH AF
Sbjct: 692 LSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFK 751
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
R+G P G L+ GPPGC G EL+S +VGESE +R+ F
Sbjct: 752 RIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFA 811
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
+AR APSIIFFDE D + + RG + ++V +R++S LL E+DGL Q G+ V+AATN
Sbjct: 812 KARANAPSIIFFDEIDSLASIRG-KENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATN 870
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTG 497
RP ID+AL+RPGRFD +LYV PP+ R IL++H R + D+ L+ +A T+ +TG
Sbjct: 871 RPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTG 930
Query: 498 AELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKP 535
A++ +CREA I AL E + + RH + ++P
Sbjct: 931 ADISLICREAAIAALEESLEMEEISMRHLKAAISQIEP 968
Score = 366 (133.9 bits), Expect = 1.1e-96, Sum P(2) = 1.1e-96
Identities = 90/240 (37%), Positives = 136/240 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG LR++I + +S + LGL+ +G+L++GPPGTGKTSL R R G +
Sbjct: 387 LGGLSKEYAILRDIIDSSSIKNSLSS-LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVN 445
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP-RRDHRREQD 139
++ + ++GESEKAL E F AS+ P+VVFID++DA+ P R++ E
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASN----ATPAVVFIDDLDAIAPARKEGGEELS 501
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ + L LMD S+T VVV+A+TNR D+I+PALRR GR D R
Sbjct: 502 QRMVATLLNLMDGI--SRTD--GVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQR 557
Query: 200 FEILKLYTKKVPLD-ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+IL + + + +N+ +E +A + +G+VGADL ALC EA ++R D + + L
Sbjct: 558 SDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQSSSSSNL 617
Score = 353 (129.3 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 82/238 (34%), Positives = 128/238 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG L E + +P + +++G + P G+L++GPPG KT + RAV E
Sbjct: 724 EDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAK 783
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+ + + VGESEKA+R F++A ++A PS++F DEID+L R +
Sbjct: 784 LNFLAVKGPELFSKWVGESEKAVRSLFAKARANA----PSIIFFDEIDSLASIRGKENDG 839
Query: 139 -DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
V R+ SQL +D + V V+A+TNR D ID AL R GRFD
Sbjct: 840 VSVSDRVMSQLLVELDGLH-QRVGV---TVIAATNRPDKIDSALLRPGRFDRLLYVGPPN 895
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK++ +K+P +++ L+ +A+ GY GAD+ +CREA ++A++ S + E
Sbjct: 896 ETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEE 953
Score = 349 (127.9 bits), Expect = 9.8e-29, P = 9.8e-29
Identities = 92/301 (30%), Positives = 145/301 (48%)
Query: 233 LEALCREATMSAVKRSSDANECAGVLSVTMED--WRH-----ARSVVGPSITRGVTVEIP 285
L +C A KR SD + + E + H A + G + +G+ +
Sbjct: 318 LSEICIFCVKRADKRPSDTSNRNHAFMINQETKVYLHHTLDLASEIQGRTFVQGLQFDEG 377
Query: 286 KVTWEDIGGLRDLKKK---LQQAVEWP-IKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
+ +I L L K+ L+ ++ IK+S S LG+ P +G L+HGPPG
Sbjct: 378 ENVGCEISKLGGLSKEYAILRDIIDSSSIKNS--LSSLGLRPTKGVLIHGPPGTGKTSLA 435
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG-AKRG 400
G E+ S Y+GESE L F+ A A P+++F D+ D + A++
Sbjct: 436 RTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKE 495
Query: 401 GSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP 460
G S +R+++TLL MDG+ + G++V+AATNRP +I+ AL RPGR D + +
Sbjct: 496 GGEELS----QRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGV 551
Query: 461 PDLEARHEILRVHTRNMKVG-DDVDLRSIAEETELFTGAELEGLCREAGIVALREDISAT 519
P R +IL + R M+ ++ + +A T F GA+L LC EA V LR + +
Sbjct: 552 PSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQS 611
Query: 520 A 520
+
Sbjct: 612 S 612
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 903 (322.9 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 194/444 (43%), Positives = 274/444 (61%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRGLLLYGPPGTGKT
Sbjct: 343 EQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQSEVEKRVVASLLTLMDGIG-SEGSEGRVLVLGATNRPQALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L +L +A + +GYVGADL+ALC EA + A+
Sbjct: 517 KEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R N + AG++ +T+ D+ + + PS R V +++P V+W DIGGL ++K
Sbjct: 577 RRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +FSR+GI P +G LL+GPPGC G E
Sbjct: 637 LKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R F++AR APSIIFFDE D + +RG SS V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVREVFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAKGILVLAATNRPHAID 443
EMDG+EQ K + VLAATNRP ID
Sbjct: 756 EMDGIEQLKNVTVLAATNRPDRID 779
Score = 389 (142.0 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 93/232 (40%), Positives = 130/232 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++ IGGL K +++ +E P+K F GI RG LL+GPPG
Sbjct: 349 KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S + GE+EA LR F A L PSIIF DE D + KR G+ S
Sbjct: 409 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468
Query: 406 SITVGERLLSTLLTEMDGL--EQAKG-ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
V +R++++LLT MDG+ E ++G +LVL ATNRP A+DAAL RPGRFD + + P+
Sbjct: 469 ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Query: 463 LEARHEILRVHTRNMK-VGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ R +IL+ R + + +L +A + GA+L+ LC EAG+ ALR
Sbjct: 526 AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALR 577
Score = 68 (29.0 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 503 LCREAGIVALREDISATAVRNRHFQTVKDSLKPAL 537
+C+EA ++AL E+I A + RHF + P +
Sbjct: 784 VCKEAALLALEENIKADCIMKRHFTQALSIVTPRI 818
Score = 37 (18.1 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 11/52 (21%), Positives = 25/52 (48%)
Query: 122 IDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVD 173
++EI L D +E + + S+ L ++ +K + ++ST R++
Sbjct: 282 LEEITGLKCSFDSSKEGNTQPISEEKLLKSTSAGAKNNTDTFYFISSTTRIN 333
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 516 (186.7 bits), Expect = 3.5e-93, Sum P(2) = 3.5e-93
Identities = 99/286 (34%), Positives = 173/286 (60%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++ + ++HA ++ PS R V+IP VTW DIGG+ ++K++L++ + +P+++ ++
Sbjct: 902 LTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYN 961
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+ + +G LL+GPPGC G EL +M+ GESEA +R+ F
Sbjct: 962 KFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFD 1021
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
+AR A+P IIFFDE D + +R +S+T+ +R+++ +LTE+DG+ + K I ++AATN
Sbjct: 1022 KARAASPCIIFFDEIDSLAKER--NSNTNNDASDRVINQILTEIDGINEKKTIFIIAATN 1079
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTG 497
RP +D AL RPGR D ++Y+ PDL++R+ I + +N + +DVD+ +A+ TE F+G
Sbjct: 1080 RPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSG 1139
Query: 498 AELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
A++ LC+ A A++E I +R + + + K + ++ D
Sbjct: 1140 ADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTD 1185
Score = 454 (164.9 bits), Expect = 3.5e-93, Sum P(2) = 3.5e-93
Identities = 99/238 (41%), Positives = 144/238 (60%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N+ E+ +GG + + +RELI PL Y +G+ P+G+L++G PGTGKTS+
Sbjct: 519 ENNDDITYED-LGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSI 577
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+A+ E A+ +I+ + H+GESE+ LR+ F +AS P ++FIDEID++
Sbjct: 578 AKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKT----PCIIFIDEIDSIA 633
Query: 130 PRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
+R E + R+ SQL TLMD K + +V+V+A+TNR ++IDPALRR GRFD
Sbjct: 634 NKRSKSNNELEKRVVSQLLTLMDGLKKNN----NVLVLAATNRPNSIDPALRRFGRFDRE 689
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R+EIL TKK+ LD +V+L IA C+GYVGADL LC EA + +K
Sbjct: 690 IEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIK 747
Score = 444 (161.4 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 94/230 (40%), Positives = 137/230 (59%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+T+ED+GG++ K+++ +E P+K+ F +GIS +G L+HG PG
Sbjct: 524 ITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S ++GESE LR F++A P IIF DE D + KR S++
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE- 642
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
+ +R++S LLT MDGL++ +LVLAATNRP++ID AL R GRFD + +P PD + R
Sbjct: 643 --LEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGR 700
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDI 516
+EIL T+ MK+ DV+LR IA+E + GA+L LC EA I ++E I
Sbjct: 701 YEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 750
Score = 354 (129.7 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 79/230 (34%), Positives = 116/230 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG E L+E I +PL Y K + +G+LLYGPPG GKT L +A+ EC A+
Sbjct: 936 IGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKAN 995
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + GESE +R+ F +A + P ++F DEID+L R+ D
Sbjct: 996 FISVKGPELLTMWFGESEANVRDLFDKARA----ASPCIIFFDEIDSLAKERNSNTNNDA 1051
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T +D KT + ++A+TNR D +D AL R GR D
Sbjct: 1052 SDRVINQILTEIDGINEKKT----IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKS 1107
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R+ I K K PL+ +VD+ +A G+ GAD+ LC+ A A+K +
Sbjct: 1108 RYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET 1157
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 516 (186.7 bits), Expect = 3.5e-93, Sum P(2) = 3.5e-93
Identities = 99/286 (34%), Positives = 173/286 (60%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++ + ++HA ++ PS R V+IP VTW DIGG+ ++K++L++ + +P+++ ++
Sbjct: 902 LTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYN 961
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+ + +G LL+GPPGC G EL +M+ GESEA +R+ F
Sbjct: 962 KFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFD 1021
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
+AR A+P IIFFDE D + +R +S+T+ +R+++ +LTE+DG+ + K I ++AATN
Sbjct: 1022 KARAASPCIIFFDEIDSLAKER--NSNTNNDASDRVINQILTEIDGINEKKTIFIIAATN 1079
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTG 497
RP +D AL RPGR D ++Y+ PDL++R+ I + +N + +DVD+ +A+ TE F+G
Sbjct: 1080 RPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSG 1139
Query: 498 AELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
A++ LC+ A A++E I +R + + + K + ++ D
Sbjct: 1140 ADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTD 1185
Score = 454 (164.9 bits), Expect = 3.5e-93, Sum P(2) = 3.5e-93
Identities = 99/238 (41%), Positives = 144/238 (60%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N+ E+ +GG + + +RELI PL Y +G+ P+G+L++G PGTGKTS+
Sbjct: 519 ENNDDITYED-LGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSI 577
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+A+ E A+ +I+ + H+GESE+ LR+ F +AS P ++FIDEID++
Sbjct: 578 AKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKT----PCIIFIDEIDSIA 633
Query: 130 PRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
+R E + R+ SQL TLMD K + +V+V+A+TNR ++IDPALRR GRFD
Sbjct: 634 NKRSKSNNELEKRVVSQLLTLMDGLKKNN----NVLVLAATNRPNSIDPALRRFGRFDRE 689
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R+EIL TKK+ LD +V+L IA C+GYVGADL LC EA + +K
Sbjct: 690 IEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIK 747
Score = 444 (161.4 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 94/230 (40%), Positives = 137/230 (59%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+T+ED+GG++ K+++ +E P+K+ F +GIS +G L+HG PG
Sbjct: 524 ITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S ++GESE LR F++A P IIF DE D + KR S++
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE- 642
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
+ +R++S LLT MDGL++ +LVLAATNRP++ID AL R GRFD + +P PD + R
Sbjct: 643 --LEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGR 700
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDI 516
+EIL T+ MK+ DV+LR IA+E + GA+L LC EA I ++E I
Sbjct: 701 YEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 750
Score = 354 (129.7 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 79/230 (34%), Positives = 116/230 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG E L+E I +PL Y K + +G+LLYGPPG GKT L +A+ EC A+
Sbjct: 936 IGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKAN 995
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + GESE +R+ F +A + P ++F DEID+L R+ D
Sbjct: 996 FISVKGPELLTMWFGESEANVRDLFDKARA----ASPCIIFFDEIDSLAKERNSNTNNDA 1051
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T +D KT + ++A+TNR D +D AL R GR D
Sbjct: 1052 SDRVINQILTEIDGINEKKT----IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKS 1107
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R+ I K K PL+ +VD+ +A G+ GAD+ LC+ A A+K +
Sbjct: 1108 RYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET 1157
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 199/512 (38%), Positives = 296/512 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG ++ L E++ +P+L+ + L + P+G+LL GPPGTGKT LVR V
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQAS--SHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+ I + +++GE+E+ LR F +AS S A S P VVFIDEID +CP R +
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQN 408
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ R+ Q TL+D K ++ +++A+TNR + ID ALRR GR D
Sbjct: 409 ESRVVGQFLTLLDGIGARKGNL---IIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQ 465
Query: 199 RFEILKLYTKKVPLDANVD--LEAIATSCNGYVGADLEALCREATMSAVKR--------- 247
R +ILKLY K+P+ L+ IA GYVGA+++ LCR++ A +
Sbjct: 466 RLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQNN 525
Query: 248 SSDANECAGVLSVTMEDWRHARSVVGPSITRGV-TVE-IPKVTWEDIGGLRDLKKKLQQA 305
+ NE + +ED+R + SI +G VE I V+W+DIGGL D+K++L+QA
Sbjct: 526 EQNENENEKKYLIEIEDFRESIKNNPASILKGEHLVENISNVSWDDIGGLDDIKEELRQA 585
Query: 306 VEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYV 365
+EWP + +F + G+SP +G +L+GPPGC GA ++S Y+
Sbjct: 586 IEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYL 645
Query: 366 GESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS-ITVGERLLSTLLTEMDGL 424
G+SE +R+ F++AR PSI+FFDE D + +KR S ++S R+LST L EMDG+
Sbjct: 646 GDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGV 705
Query: 425 EQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVD 484
EQ G++V+ ATNR ID AL+RPGRFD +L + PD +R +IL++ T+++ + D+V+
Sbjct: 706 EQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVN 765
Query: 485 LRSIAEETELFTGAELEGLCREAGIVALREDI 516
L I+ T F+GA+LE LCREA +LR D+
Sbjct: 766 LIEISNLTNGFSGADLENLCREASFQSLRRDL 797
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 190/439 (43%), Positives = 272/439 (61%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG + ++ +RE+I PL + G+ PRG+LLYGPPGTGKT + RAV E G
Sbjct: 347 DMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVG 406
Query: 79 AHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
A+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DALCP+R+ +
Sbjct: 407 AYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDALCPKREGAQN 461
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 462 EVEKRVVASLLTLMDGIG-SEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 520
Query: 197 XXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAVKR--SSDAN- 252
R +IL+ ++VP L +L +A S +GYVGADL+ALC EA + A++R N
Sbjct: 521 QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNL 580
Query: 253 ---ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWP 309
+ AG++ +T++D+ + + PS R V +++P V+W DIGGL ++K KL+QAVEWP
Sbjct: 581 PDSKVAGLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWP 640
Query: 310 IKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESE 369
+KH +F+++GI P +G LL+GPPGC G EL + YVGESE
Sbjct: 641 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 700
Query: 370 ALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG 429
+R F++AR APSIIFFDE D + +RG SS V +R+L+ LLTEMDG+EQ K
Sbjct: 701 RAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLTEMDGIEQLKD 759
Query: 430 ILVLAATNRPHAIDAALMR 448
+ +LAATNRP ID L+R
Sbjct: 760 VTILAATNRPDRIDKELLR 778
Score = 415 (151.1 bits), Expect = 5.0e-38, P = 5.0e-38
Identities = 95/232 (40%), Positives = 135/232 (58%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++ IGGL K++++ +E P+K F GISP RG LL+GPPG
Sbjct: 343 KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVA 402
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S + GE+EA LR F A L PSIIF DE D + KR G+ +
Sbjct: 403 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNE 462
Query: 406 SITVGERLLSTLLTEMDGL--EQAKG-ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
V +R++++LLT MDG+ E ++G +LVL ATNRPHA+DAAL RPGRFD + + P+
Sbjct: 463 ---VEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPN 519
Query: 463 LEARHEILRVHTRNMK-VGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ R +IL+ R + + + +L +A + GA+L+ LC EAG+ ALR
Sbjct: 520 AQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALR 571
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 187/444 (42%), Positives = 268/444 (60%)
Query: 95 GESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQDVRIASQLFTLMDSN 153
GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E + RI SQL TLMD
Sbjct: 12 GESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL 67
Query: 154 KPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLD 213
K HV+V+A+TNR ++IDPALRR GRFD R EIL+++TK + L
Sbjct: 68 KQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLA 123
Query: 214 ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA---------NECAGVLSVTMED 264
+VDLE + +G+VGADL ALC EA + A+++ D E L+VTM+D
Sbjct: 124 DDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDD 183
Query: 265 WRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPV 324
+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P++H F + G++P
Sbjct: 184 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPS 243
Query: 325 RGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAP 384
+G L +GPPGC G EL +M+ GESEA +R F +AR AAP
Sbjct: 244 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 303
Query: 385 SIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDA 444
++FFDE D + RGG+ +R+++ +LTEMDG+ K + ++ ATNRP ID
Sbjct: 304 CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDP 363
Query: 445 ALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLC 504
A++RPGR D ++Y+P PD ++R IL+ + R V DVDL +A+ T F+GA+L +C
Sbjct: 364 AILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEIC 423
Query: 505 REAGIVALREDISATAVRNRHFQT 528
+ A +A+RE I + R R QT
Sbjct: 424 QRACKLAIRESIESEIRRERERQT 447
Score = 355 (130.0 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 81/186 (43%), Positives = 112/186 (60%)
Query: 357 GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLST 416
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T V R++S
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTHGEVERRIVSQ 59
Query: 417 LLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRN 476
LLT MDGL+Q ++V+AATNRP++ID AL R GRFD + + PD R EIL++HT+N
Sbjct: 60 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 119
Query: 477 MKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQT-VKDSLKP 535
MK+ DDVDL + ET GA+L LC EA + A+R+ + + + V +SL
Sbjct: 120 MKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSL-- 177
Query: 536 ALTKEE 541
A+T ++
Sbjct: 178 AVTMDD 183
Score = 334 (122.6 bits), Expect = 7.5e-28, P = 7.5e-28
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 209 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 268
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 269 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 324
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 325 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S ++
Sbjct: 380 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES 437
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 188/434 (43%), Positives = 270/434 (62%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG + ++ +RE+I PL + G+ PRG+LLYGPPGTGKT + RAV E G
Sbjct: 344 DMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVG 403
Query: 79 AHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
A+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DALCP+R+ +
Sbjct: 404 AYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDALCPKREGAQN 458
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 459 EVEKRVVASLLTLMDGIG-SEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 517
Query: 197 XXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAVKR------SS 249
R +IL+ ++VP L +L +A S +GYVGADL+ALC EA + A++R +
Sbjct: 518 QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNL 577
Query: 250 DANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWP 309
++ AG++ +T++D+ + + PS R V V++P V+W DIGGL ++K KL+QAVEWP
Sbjct: 578 PDSKMAGLVKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWP 637
Query: 310 IKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESE 369
+KH +F+++GI P +G LL+GPPGC G EL + YVGESE
Sbjct: 638 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 697
Query: 370 ALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG 429
+R F++AR APSIIFFDE D + +RG SS V +R+L+ LLTEMDG+EQ K
Sbjct: 698 RAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLTEMDGIEQLKN 756
Query: 430 ILVLAATNRPHAID 443
+ +LAATNRP ID
Sbjct: 757 VTILAATNRPDRID 770
Score = 408 (148.7 bits), Expect = 2.8e-37, P = 2.8e-37
Identities = 94/232 (40%), Positives = 134/232 (57%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++ IGGL K++++ +E P+K F GI P RG LL+GPPG
Sbjct: 340 KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 399
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S + GE+EA LR F A L PSIIF DE D + KR G+ +
Sbjct: 400 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNE 459
Query: 406 SITVGERLLSTLLTEMDGL--EQAKG-ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
V +R++++LLT MDG+ E ++G +LVL ATNRPHA+DAAL RPGRFD + + P+
Sbjct: 460 ---VEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPN 516
Query: 463 LEARHEILRVHTRNMK-VGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ R +IL+ R + + + +L +A + GA+L+ LC EAG+ ALR
Sbjct: 517 AQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALR 568
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 482 (174.7 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 122/324 (37%), Positives = 171/324 (52%)
Query: 235 ALCR--EATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDI 292
AL R + S+V S D L V M D+ + V PS R +P VTW D+
Sbjct: 466 ALARLLDLLKSSVSLSEDQ---LAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADV 522
Query: 293 GGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXX 352
G L+D++++L A+ PI++ F LG+S G LL GPPGC
Sbjct: 523 GALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNF 582
Query: 353 XXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGER 412
G EL +MYVGESE +R FQR R +AP +IFFDE D + +R S + R
Sbjct: 583 ISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGASV---R 639
Query: 413 LLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRV 472
+++ LLTEMDG+E + + ++AATNRP ID A++RPGR D LYV P RH IL
Sbjct: 640 VVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNT 699
Query: 473 HTRN---MKVGDDVDLRSIAEET--ELFTGAELEGLCREAGIVALREDI--------SAT 519
T+ ++ DV L IA + E FTGA+L L REA + ALR + SA
Sbjct: 700 ITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVHLDPAQTHTESAK 759
Query: 520 AVR-NR-HFQTVKDSLKPALTKEE 541
+R +R HF+ ++P+++K++
Sbjct: 760 DIRVSRVHFEDAFKKVRPSVSKKD 783
Score = 403 (146.9 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 98/230 (42%), Positives = 132/230 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E GG+ +E + +L+ + + Q+LG+ PRG LL+GPPG GKT L +AV E
Sbjct: 227 EDFGGSDETLEEVCKLLIH-MRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETA 285
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-RE 137
L IS + GESE+ LRE F QA S A P ++FIDEIDA+ P+R+ ++
Sbjct: 286 LPLLKISAPELVSGVSGESEQKLRELFEQAISSA----PCILFIDEIDAITPKRETASKD 341
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ RI +QL T MD S V+V+ +TNR D++DPALRR+GRFD
Sbjct: 342 MERRIVAQLLTCMDDLN-SMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEG 400
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R +ILK +K+ L + D +A GYVGADL ALCREA M+AV R
Sbjct: 401 ARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNAVNR 450
Score = 377 (137.8 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 101/268 (37%), Positives = 138/268 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+G + E L I P+ Q + LGL P GLLL GPPG GKT L +AV G +
Sbjct: 522 VGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLN 581
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQD 139
+ + +VGESE+A+R+ F + + A P V+F DEIDALCPRR +H
Sbjct: 582 FISVKGPELLNMYVGESERAVRQVFQRGRNSA----PCVIFFDEIDALCPRRSEHESGAS 637
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
VR+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 638 VRVVNQLLTEMDGMENRR----QVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADR 693
Query: 200 FEILKLYTK---KVPLDANVDLEAIA--TSCNGYVGADLEALCREATMSAVKRSSDA--- 251
IL TK K LD++V LE IA C + GADL AL REA ++A++ D
Sbjct: 694 HAILNTITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVHLDPAQT 753
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITR 278
E A + V+ + A V PS+++
Sbjct: 754 HTESAKDIRVSRVHFEDAFKKVRPSVSK 781
Score = 359 (131.4 bits), Expect = 4.0e-30, P = 4.0e-30
Identities = 87/241 (36%), Positives = 128/241 (53%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPG 334
S +G ++ V +ED GG + +++ + + ++H + RLG+ P RG LLHGPPG
Sbjct: 212 SKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIH-MRHPEVYQRLGVVPPRGFLLHGPPG 270
Query: 335 CXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADV 394
C EL S GESE LR F++A +AP I+F DE D
Sbjct: 271 CGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDA 330
Query: 395 VGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKGILVLAATNRPHAIDAALMRPGR 451
+ KR + S + R+++ LLT MD L + +LV+ ATNRP ++D AL R GR
Sbjct: 331 ITPKR---ETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGR 387
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
FD + + PD AR +IL+ R +++ DD D R +A T + GA+L LCREA + A
Sbjct: 388 FDREICLGIPDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNA 447
Query: 512 L 512
+
Sbjct: 448 V 448
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 557 (201.1 bits), Expect = 2.5e-85, Sum P(2) = 2.5e-85
Identities = 125/305 (40%), Positives = 180/305 (59%)
Query: 249 SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
+D N C +T+ D+ A V+ PS R + +P TW+DIG L ++++L+ AV
Sbjct: 626 ADPNFC-----LTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLA 680
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGES 368
P+K+ RLG++ G LL GPPGC G EL +MYVGES
Sbjct: 681 PVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGES 740
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQ 426
E +R FQRAR +AP +IFFDE D + KR GG + S G R+++ LLTEMDG+E+
Sbjct: 741 ERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNS---GTRIVNQLLTEMDGVEE 797
Query: 427 AKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMK---VGDDV 483
KG+ +LAATNRP ID A++RPGR D +LYV P+ R EIL+ T+N K + DDV
Sbjct: 798 RKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDV 857
Query: 484 DLRSIAEETELFTGAELEGLCREAGIVALREDISA-------TAVRNRHFQTVKDSLKPA 536
DL IA +TE +TGA+L GL ++A + +LR+ ++ VR++HFQ L+P+
Sbjct: 858 DLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLCVRSQHFQEALQQLRPS 917
Query: 537 LTKEE 541
+ +++
Sbjct: 918 VNEQD 922
Score = 373 (136.4 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 96/263 (36%), Positives = 141/263 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IG E L+ + P+ Y ++LGL P G+LL GPPG GKT L +A+ E G +
Sbjct: 664 IGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGIN 723
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD- 139
+ + +VGESE+A+R F +A + A P V+F DE D+LCP+R + +
Sbjct: 724 FISVKGPELMNMYVGESERAVRACFQRARNSA----PCVIFFDEFDSLCPKRSDGGDGNN 779
Query: 140 --VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
RI +QL T MD + K V ++A+TNR D IDPA+ R GR D
Sbjct: 780 SGTRIVNQLLTEMDGVEERKG----VYILAATNRPDIIDPAILRPGRLDTILYVGFPEQS 835
Query: 198 XRFEILKLYTK--KVPLDAN-VDLEAIATSCNGYVGADLEALCREATMSAVKRS-SDANE 253
R EILK TK K P+ A+ VDL+ IA GY GADL L ++A+M ++++S ++ +
Sbjct: 836 ERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDT 895
Query: 254 CAGVLSVTMEDWRHARSVVGPSI 276
L V + ++ A + PS+
Sbjct: 896 NLDDLCVRSQHFQEALQQLRPSV 918
Score = 330 (121.2 bits), Expect = 2.5e-85, Sum P(2) = 2.5e-85
Identities = 90/231 (38%), Positives = 127/231 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQ-KLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
IGG + ++ L E++ + S + +LGL RGLLL+GPPG GKT L RA+ +
Sbjct: 253 IGGMDSTLKELCEMLIH--IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKM 310
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQ 138
L I + GESE+ +RE F QA ++ P V+FIDEIDA+ R ++
Sbjct: 311 PLMEIPATELIGGISGESEERIREVFDQAIGYS----PCVLFIDEIDAIGGNRQWASKDM 366
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ RI SQL + +D+ K ++ VVV+A+T R D +DP LRR GRFD
Sbjct: 367 ERRIVSQLISSLDNLKANEFG-QSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKE 425
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
R EIL++ + + +D ++ + IA GYVGADL AL A AVKR S
Sbjct: 426 RREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRS 476
Score = 318 (117.0 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 91/301 (30%), Positives = 137/301 (45%)
Query: 244 AVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQ 303
AV RS D G+ ++ R R + V+ P ++ DIGG+ K+L
Sbjct: 208 AVPRSKDHRNVPGLYQQLHQNQSRDRL---RKFKRDLEVQHPTESFRDIGGMDSTLKELC 264
Query: 304 QAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSM 363
+ + IK + +LG+ P RG LLHGPPGC EL
Sbjct: 265 EMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGG 323
Query: 364 YVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG 423
GESE +R F +A +P ++F DE D +G R +S + R++S L++ +D
Sbjct: 324 ISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKD---MERRIVSQLISSLDN 380
Query: 424 L---EQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVG 480
L E + ++V+AAT RP +D L R GRFD + + P + R EILR+ + V
Sbjct: 381 LKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVD 440
Query: 481 DDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKE 540
++ IAE T + GA+L L A VA++ S R H + K+ L +
Sbjct: 441 PKLNYDKIAELTPGYVGADLMALVSRAASVAVKRR-SMKKFRELHAASEKNMTTVTLDDD 499
Query: 541 E 541
E
Sbjct: 500 E 500
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 482 (174.7 bits), Expect = 6.3e-85, Sum P(3) = 6.3e-85
Identities = 106/291 (36%), Positives = 158/291 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + M D++ A V P+ R IP VTW+D+G L ++++L ++ PI++ +
Sbjct: 534 LYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYK 593
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+GI G L++GPPGC G EL + YVGESE +R FQ
Sbjct: 594 NMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQ 653
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA ++P +IFFDE D + KRGG ER+++ LLTEMDGLE+ + ++AATN
Sbjct: 654 RAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATN 713
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETEL--F 495
RP IDAA+ RPGR D ++YVP P E R EIL+ T + + DVDL + + F
Sbjct: 714 RPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSF 773
Query: 496 TGAELEGLCREAGIVALRE--DISAT---AVRNRHFQTVKDSLKPALTKEE 541
+GA+L L +EA A+ D ++T V F +KP++++++
Sbjct: 774 SGADLSLLVKEAANHAISRGFDNNSTEPDTVTMEDFIFALSKIKPSVSRKD 824
Score = 415 (151.1 bits), Expect = 7.1e-38, P = 7.1e-38
Identities = 112/295 (37%), Positives = 159/295 (53%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W A+ G R E L I P+ Y + + +G+ P G+L+YGPPG GKT L +
Sbjct: 562 NVTWDDVGALSGVR---EELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAK 618
Query: 72 AVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
A+ EC A+ ++V P ++K +VGESE+A+R+ F +A++ + P V+F DE DAL P
Sbjct: 619 AIASECQANFISVKGPELLNK-YVGESERAVRQVFQRAAASS----PCVIFFDEFDALAP 673
Query: 131 RR---DHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
+R D Q R+ +QL T MD + K S V ++A+TNR D ID A+ R GR D
Sbjct: 674 KRGGGDGGGNQATERVVNQLLTEMDGLE--KRS--EVFIIAATNRPDIIDAAMCRPGRLD 729
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATS--CNGYVGADLEALCREATMSA 244
R EILK T K+P+ +VDL + T C+ + GADL L +EA A
Sbjct: 730 KMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHA 789
Query: 245 VKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+ R D N +VTMED+ A S + PS++R + K+ DI RD K
Sbjct: 790 ISRGFDNNSTEPD-TVTMEDFIFALSKIKPSVSRKDELMYDKLN-NDINKSRDKK 842
Score = 234 (87.4 bits), Expect = 6.3e-85, Sum P(3) = 6.3e-85
Identities = 53/133 (39%), Positives = 77/133 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + + +RE I +P+ + LG++ PRG+LL+GP G GKT L +A+ E
Sbjct: 218 LGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVP 277
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQD 139
L IS + GESE +R FS A + A P ++FIDEIDA+ P+R+ ++ +
Sbjct: 278 LFAISATEITSGVSGESEARVRTLFSNAIAQA----PCIIFIDEIDAIAPKRESASKDME 333
Query: 140 VRIASQLFTLMDS 152
RI SQL T MDS
Sbjct: 334 RRIVSQLLTCMDS 346
Score = 228 (85.3 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 51/141 (36%), Positives = 70/141 (49%)
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
IP + + ++GG+ + +++ +E+PI H +S LG+ P RG LLHGP GC
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
E+ S GESEA +R F A AP IIF DE D + KR
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR---E 326
Query: 404 STSITVGERLLSTLLTEMDGL 424
S S + R++S LLT MD L
Sbjct: 327 SASKDMERRIVSQLLTCMDSL 347
Score = 189 (71.6 bits), Expect = 6.3e-85, Sum P(3) = 6.3e-85
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 132 RDHRREQDV-RIASQLFTLM----DSNKPSKTSVP--HVVVVASTNRVDAIDPALRRSGR 184
+ +++QD+ + SQ T ++NK K HV+V+ +TNR +++D ALR GR
Sbjct: 365 QQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGGR 424
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
FD R +ILK+ T K+ L+ N D E IAT GYVGAD+ L +EA ++
Sbjct: 425 FDKEICLGIPDQTARCKILKVITSKMRLENNFDYEEIATLTPGYVGADINLLVKEAATNS 484
Query: 245 VKRSSDAN 252
V R +N
Sbjct: 485 VNRIFTSN 492
Score = 141 (54.7 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 428 KG-ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLR 486
KG ++V+ ATNRP ++D AL GRFD + + PD AR +IL+V T M++ ++ D
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459
Query: 487 SIAEETELFTGAELEGLCREA 507
IA T + GA++ L +EA
Sbjct: 460 EIATLTPGYVGADINLLVKEA 480
Score = 37 (18.1 bits), Expect = 5.6e-69, Sum P(3) = 5.6e-69
Identities = 7/45 (15%), Positives = 23/45 (51%)
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
++ ++++L + +P K + ++ ++ + + PA +R G
Sbjct: 512 NIGLSTELLISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREG 556
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 477 (173.0 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 105/261 (40%), Positives = 149/261 (57%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++T +D+ +A V PS R IP VTW+++G L ++ +L + PIK +
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYL 549
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
++GI+ G L+ GPPGC G EL + YVGESE +R FQ
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQ 609
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RAR + P IIFFDE D + +R S S S R+++TLLTE+DGL KG+ V+ ATN
Sbjct: 610 RARASTPCIIFFDELDALVPRRDTSMSES---SSRVVNTLLTELDGLNDRKGVFVIGATN 666
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILR--VHTRNMKVGDDVDLRSIAEETEL- 494
RP ID A++RPGR D LY+ P E R EIL+ V T N + +VDL +I+ ++
Sbjct: 667 RPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCG 726
Query: 495 -FTGAELEGLCREAGIVALRE 514
F+GA+L L +EAG+ AL++
Sbjct: 727 NFSGADLSSLVKEAGVWALKK 747
Score = 403 (146.9 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 96/232 (41%), Positives = 132/232 (56%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
++GG + L E+I P+L+ G++ PRG+LLYGPPG GKT++ A+ E
Sbjct: 194 SLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKV 253
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH--RRE 137
IS SV GESEK LRE F +A A P ++F+DEIDA+ P+RD +RE
Sbjct: 254 PFINISAPSVVSGMSGESEKKLREIFEEAKQIA----PCLIFMDEIDAITPKRDGGAQRE 309
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ RI +QL TLMD KT VVV+ +TNR D++D ALRR+GRFD
Sbjct: 310 MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEE 369
Query: 198 XRFEILKLYTKKVPLD--ANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R ILK TK + L+ + + ++ GYVGADL++L A +SA+KR
Sbjct: 370 QRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKR 421
Score = 361 (132.1 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 96/252 (38%), Positives = 139/252 (55%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAF 105
K+G+ P G+L++GPPG GKT L +AV E A+ +++ P ++K +VGESEKA+R+ F
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK-YVGESEKAVRQVF 608
Query: 106 SQASSHALSGKPSVVFIDEIDALCPRRD-HRREQDVRIASQLFTLMDSNKPSKTSVPHVV 164
+A + P ++F DE+DAL PRRD E R+ + L T +D K V
Sbjct: 609 QRARAST----PCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKG----VF 660
Query: 165 VVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILK--LYTKKVPLDANVDLEAIA 222
V+ +TNR D IDPA+ R GR D R EILK + T PL ANVDL AI+
Sbjct: 661 VIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAIS 720
Query: 223 --TSCNGYVGADLEALCREATMSAVKRSSDANE------CAGV---------LSVTMEDW 265
+ C + GADL +L +EA + A+K+ N+ +G +S+T ED+
Sbjct: 721 RDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDF 780
Query: 266 RHARSVVGPSIT 277
HA S + PS++
Sbjct: 781 DHALSSIRPSVS 792
Score = 356 (130.4 bits), Expect = 9.9e-30, P = 9.9e-30
Identities = 84/260 (32%), Positives = 132/260 (50%)
Query: 278 RGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXX 337
R + P + +GG+ + +L + + PI H +S G+ P RG LL+GPPGC
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 338 XXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGA 397
+ S GESE LR F+ A+ AP +IF DE D +
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 398 KRGGSSSTSITVGERLLSTLLTEMDGL--EQAKG--ILVLAATNRPHAIDAALMRPGRFD 453
KR G + + +R+++ LLT MD L E+ G ++V+ ATNRP ++D+AL R GRFD
Sbjct: 301 KRDGGAQREME--KRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFD 358
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKV--GDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
+ + P+ E R IL+ T+N+K+ G+ + R +++ T + GA+L+ L AGI A
Sbjct: 359 REICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISA 418
Query: 512 LREDISATAVRNRHFQTVKD 531
++ + +VKD
Sbjct: 419 IKRIFETMSELQEESHSVKD 438
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 477 (173.0 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 105/261 (40%), Positives = 149/261 (57%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++T +D+ +A V PS R IP VTW+++G L ++ +L + PIK +
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYL 549
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
++GI+ G L+ GPPGC G EL + YVGESE +R FQ
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQ 609
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RAR + P IIFFDE D + +R S S S R+++TLLTE+DGL KG+ V+ ATN
Sbjct: 610 RARASTPCIIFFDELDALVPRRDTSMSES---SSRVVNTLLTELDGLNDRKGVFVIGATN 666
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILR--VHTRNMKVGDDVDLRSIAEETEL- 494
RP ID A++RPGR D LY+ P E R EIL+ V T N + +VDL +I+ ++
Sbjct: 667 RPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCG 726
Query: 495 -FTGAELEGLCREAGIVALRE 514
F+GA+L L +EAG+ AL++
Sbjct: 727 NFSGADLSSLVKEAGVWALKK 747
Score = 403 (146.9 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 96/232 (41%), Positives = 132/232 (56%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
++GG + L E+I P+L+ G++ PRG+LLYGPPG GKT++ A+ E
Sbjct: 194 SLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKV 253
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH--RRE 137
IS SV GESEK LRE F +A A P ++F+DEIDA+ P+RD +RE
Sbjct: 254 PFINISAPSVVSGMSGESEKKLREIFEEAKQIA----PCLIFMDEIDAITPKRDGGAQRE 309
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ RI +QL TLMD KT VVV+ +TNR D++D ALRR+GRFD
Sbjct: 310 MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEE 369
Query: 198 XRFEILKLYTKKVPLD--ANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R ILK TK + L+ + + ++ GYVGADL++L A +SA+KR
Sbjct: 370 QRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKR 421
Score = 361 (132.1 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 96/252 (38%), Positives = 139/252 (55%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAF 105
K+G+ P G+L++GPPG GKT L +AV E A+ +++ P ++K +VGESEKA+R+ F
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK-YVGESEKAVRQVF 608
Query: 106 SQASSHALSGKPSVVFIDEIDALCPRRD-HRREQDVRIASQLFTLMDSNKPSKTSVPHVV 164
+A + P ++F DE+DAL PRRD E R+ + L T +D K V
Sbjct: 609 QRARAST----PCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKG----VF 660
Query: 165 VVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILK--LYTKKVPLDANVDLEAIA 222
V+ +TNR D IDPA+ R GR D R EILK + T PL ANVDL AI+
Sbjct: 661 VIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAIS 720
Query: 223 --TSCNGYVGADLEALCREATMSAVKRSSDANE------CAGV---------LSVTMEDW 265
+ C + GADL +L +EA + A+K+ N+ +G +S+T ED+
Sbjct: 721 RDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDF 780
Query: 266 RHARSVVGPSIT 277
HA S + PS++
Sbjct: 781 DHALSSIRPSVS 792
Score = 356 (130.4 bits), Expect = 9.9e-30, P = 9.9e-30
Identities = 84/260 (32%), Positives = 132/260 (50%)
Query: 278 RGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXX 337
R + P + +GG+ + +L + + PI H +S G+ P RG LL+GPPGC
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 338 XXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGA 397
+ S GESE LR F+ A+ AP +IF DE D +
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 398 KRGGSSSTSITVGERLLSTLLTEMDGL--EQAKG--ILVLAATNRPHAIDAALMRPGRFD 453
KR G + + +R+++ LLT MD L E+ G ++V+ ATNRP ++D+AL R GRFD
Sbjct: 301 KRDGGAQREME--KRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFD 358
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKV--GDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
+ + P+ E R IL+ T+N+K+ G+ + R +++ T + GA+L+ L AGI A
Sbjct: 359 REICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISA 418
Query: 512 LREDISATAVRNRHFQTVKD 531
++ + +VKD
Sbjct: 419 IKRIFETMSELQEESHSVKD 438
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 473 (171.6 bits), Expect = 2.0e-84, Sum P(2) = 2.0e-84
Identities = 107/280 (38%), Positives = 151/280 (53%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++ +D+ A + V PS R +P V+W +IG L+ ++ +LQ A+ PIK +
Sbjct: 460 LAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQ 519
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+GIS G LL GPPGC G EL + YVGESE +R F
Sbjct: 520 SVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFL 579
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RAR ++P +IFFDE D + +R S S + R+++TLLTE+DGL G+ V+AATN
Sbjct: 580 RARASSPCVIFFDELDAMVPRRDDSLSEA---SSRVVNTLLTELDGLSDRSGVYVIAATN 636
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIA--EETELF 495
RP ID A++RPGR D L V PD R EIL+ T+ + ++V+L + E F
Sbjct: 637 RPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNF 696
Query: 496 TGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKP 535
+GA+L L REA + ALR + A N T +L+P
Sbjct: 697 SGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEP 736
Score = 403 (146.9 bits), Expect = 2.0e-84, Sum P(2) = 2.0e-84
Identities = 94/228 (41%), Positives = 127/228 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L EL+ P+ + Q G+ PRG+LL+GPPG GKT L A+ E G
Sbjct: 176 IGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVP 235
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RREQD 139
IS S+ GESEK +RE F +A S A P ++FIDEIDA+ P+R+ +RE +
Sbjct: 236 FISISAPSIVSGMSGESEKKVREVFEEAKSLA----PCLMFIDEIDAVTPKRESAQREME 291
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI +Q T MD KT V+V+ +TNR D++D ALRR+GRFD R
Sbjct: 292 RRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAR 351
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
+IL+ K + L + D +A GYVGADL+AL A + A+KR
Sbjct: 352 EKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKR 399
Score = 381 (139.2 bits), Expect = 8.6e-33, P = 8.6e-33
Identities = 87/242 (35%), Positives = 127/242 (52%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
++ DIGGL D +L + V PIKH + GI P RG LLHGPPGC
Sbjct: 171 ISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALAN 230
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ S GESE +R F+ A+ AP ++F DE D V KR S
Sbjct: 231 ELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR---ESAQ 287
Query: 407 ITVGERLLSTLLTEMDGL--EQAKG--ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ R+++ LT MD L E+ G +LV+ ATNRP ++D+AL R GRFD + + P
Sbjct: 288 REMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPS 347
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
+AR +ILR + +K+ D D R +A++T + GA+L+ L AGI+A++ + +
Sbjct: 348 QDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPL 407
Query: 523 NR 524
N+
Sbjct: 408 NK 409
Score = 355 (130.0 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 91/245 (37%), Positives = 136/245 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IG ++ L+ I P+ Q +G+ P G+LL+GPPG GKT L +AV E A+
Sbjct: 494 IGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKAN 553
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQ 138
+++ P ++K +VGESE+A+R+ F +A + + P V+F DE+DA+ PRRD E
Sbjct: 554 FISIRGPELLNK-YVGESERAVRQVFLRARASS----PCVIFFDELDAMVPRRDDSLSEA 608
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ + L T +D S S V V+A+TNR D IDPA+ R GR D
Sbjct: 609 SSRVVNTLLTELDGL--SDRS--GVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHE 664
Query: 199 RFEILKLYTKKVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSSDANECAG 256
R EILK TK+ PL V+L+ + C+ + GADL AL REA ++A++ + A+ +
Sbjct: 665 RVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASN 724
Query: 257 VLSVT 261
+T
Sbjct: 725 EPEIT 729
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 490 (177.5 bits), Expect = 1.3e-83, Sum P(2) = 1.3e-83
Identities = 118/300 (39%), Positives = 171/300 (57%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW D+G L D++++L A+ P+++ F
Sbjct: 548 LCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPEQFR 607
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 608 ALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE + + +LAATN
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLETRQQVFILAATN 724
Query: 438 RPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN-MK--VGDDVDLRSIAEE- 491
RP ID A++RPGR D L+V PPP R IL+ T+N K + +DVDL +IA +
Sbjct: 725 RPDIIDPAILRPGRLDKTLFVGLPPP--ADRVAILKTITKNGTKPPLDEDVDLEAIANDH 782
Query: 492 -TELFTGAELEGLCREAGIVALREDISA------TA---VRNRHFQTVKDSLKPALTKEE 541
+ +TGA+L L REA + ALR++I+ TA V ++HF+ +KP+++ ++
Sbjct: 783 RCDCYTGADLSALVREASLCALRQEITGQKNGIGTAELTVSHKHFEEAFRKVKPSISVKD 842
Score = 404 (147.3 bits), Expect = 4.2e-36, P = 4.2e-36
Identities = 107/264 (40%), Positives = 146/264 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLETRQ----QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSSDANECA- 255
ILK TK K PLD +VDLEAIA C+ Y GADL AL REA++ A+++ +
Sbjct: 756 ILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALRQEITGQKNGI 815
Query: 256 GV--LSVTMEDWRHARSVVGPSIT 277
G L+V+ + + A V PSI+
Sbjct: 816 GTAELTVSHKHFEEAFRKVKPSIS 839
Score = 381 (139.2 bits), Expect = 1.3e-83, Sum P(2) = 1.3e-83
Identities = 92/231 (39%), Positives = 134/231 (58%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + Q LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 264 EDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 322
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LR+ F QA S+A P +VFIDEIDA+ P+R+ ++
Sbjct: 323 LPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNA----PCIVFIDEIDAITPKREVASKD 378
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+VV +TNR D++DPALRR+GRFD
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATA--RVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDE 436
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L + +A G+VGADL ALCREA + AV R
Sbjct: 437 ASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHR 487
Score = 334 (122.6 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 82/239 (34%), Positives = 121/239 (50%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
+ ++I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 252 KSTELQISSVKFEDVGGNDATLKEVCKMLIH--MRHPEVYQHLGVVPPRGVLLHGPPGCG 309
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR+ F +A AP I+F DE D +
Sbjct: 310 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAIT 369
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT MD L +LV+ ATNRP ++D AL R GRFD
Sbjct: 370 PKREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFD 426
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + PD +R IL+ R +++ + + +A T F GA+L LCREA + A+
Sbjct: 427 REVCLGIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAV 485
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 482 (174.7 bits), Expect = 4.8e-83, Sum P(2) = 4.8e-83
Identities = 117/302 (38%), Positives = 170/302 (56%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A + V PS R V +P VTW DIG L D++ +L A+ P+++ F
Sbjct: 548 LCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFR 607
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 608 TLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE + + +LAATN
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLETRQQVFILAATN 724
Query: 438 RPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN-MK--VGDDVDLRSIAEET 492
RP ID A++RPGR D L+V PPP R IL+ T+N K + +DV+L +IA +
Sbjct: 725 RPDIIDPAILRPGRLDKTLFVGLPPP--ADRVAILKTITKNGTKPPLDEDVNLETIANDL 782
Query: 493 EL--FTGAELEGLCREAGIVALREDISATA---------VRNRHFQTVKDSLKPALT-KE 540
+TGA+L L REA + ALR++I+A V ++HF+ +KP+++ K+
Sbjct: 783 RCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKPSISIKD 842
Query: 541 EI 542
++
Sbjct: 843 QV 844
Score = 407 (148.3 bits), Expect = 5.0e-37, P = 5.0e-37
Identities = 109/264 (41%), Positives = 146/264 (55%)
Query: 27 AVEALR-ELITF---PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +R ELI P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLETRQ----QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSSDANEC-- 254
ILK TK K PLD +V+LE IA CN Y GADL AL REA++ A+++ A +
Sbjct: 756 ILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGV 815
Query: 255 -AGVLSVTMEDWRHARSVVGPSIT 277
AG L V+ + + A V PSI+
Sbjct: 816 GAGELKVSHKHFEDAFKKVKPSIS 839
Score = 384 (140.2 bits), Expect = 4.8e-83, Sum P(2) = 4.8e-83
Identities = 93/231 (40%), Positives = 134/231 (58%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + Q LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 264 EDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 322
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P +VFIDEIDA+ P+R+ ++
Sbjct: 323 LPILKVAAPEIVSGVSGESEQKLRELFDQAVSNA----PCIVFIDEIDAITPKREVASKD 378
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDE 436
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L + +A G+VGADL ALCREA M AV R
Sbjct: 437 AARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 336 (123.3 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 84/239 (35%), Positives = 120/239 (50%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
R ++I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH--MRHPEVYQHLGVVPPRGVLLHGPPGCG 309
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F +A AP I+F DE D +
Sbjct: 310 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAIT 369
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT MD L +LV+ ATNRP ++D AL R GRFD
Sbjct: 370 PKREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFD 426
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + PD AR IL+ R +++ + + +A T F GA+L LCREA + A+
Sbjct: 427 REVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAV 485
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 462 (167.7 bits), Expect = 9.1e-83, Sum P(2) = 9.1e-83
Identities = 108/299 (36%), Positives = 158/299 (52%)
Query: 258 LSVTMEDWRHARSVVGPSITR-GVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAF 316
L V M D+ A ++V S+TR G ++ +P V W+D+GGL L+ + + + PIK +
Sbjct: 496 LFVKMSDFEEAVNLVQASLTREGFSI-VPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIY 554
Query: 317 SRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTF 376
G+ G LL+GPPGC GAEL + YVGESE +R F
Sbjct: 555 KAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLF 614
Query: 377 QRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAAT 436
QRAR AP +IFFDE D + RG + + ERLL+ L E+DG E+ + + V+ AT
Sbjct: 615 QRARTCAPCVIFFDEVDALTTSRGKEGAWVV---ERLLNQFLVELDGGER-RNVYVIGAT 670
Query: 437 NRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEET-ELF 495
NRP +D A +RPGRF +LYVP P+ + R IL+ R + VDL IA+ E F
Sbjct: 671 NRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGF 730
Query: 496 TGAELEGLCREAGIVALRE-------------DISATAVRNRHFQTVKDSLKPALTKEE 541
+GA+L L ++A A+ E DI+ ++ RHF+ + P++ K++
Sbjct: 731 SGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQ 789
Score = 401 (146.2 bits), Expect = 9.1e-83, Sum P(2) = 9.1e-83
Identities = 97/239 (40%), Positives = 136/239 (56%)
Query: 22 GGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
GG + ++ L + FP+L +K+G+K P G+L +GPPG GKT L A+ E G
Sbjct: 236 GGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPF 295
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQDV 140
IS V G SE+ +RE FS+A A PS+VFIDEIDA+ +R+++ RE +
Sbjct: 296 YKISATEVISGVSGASEENIRELFSKAYRTA----PSIVFIDEIDAIGSKRENQQREMEK 351
Query: 141 RIASQLFTLMDS--NKPSK----TSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
RI +QL T MD NK K +S V+V+ +TNR DA+DPALRRSGRF+
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R EIL + +K+ L+ D + IA G+VGADLE++ A A+KR D+ +
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRK 470
Score = 336 (123.3 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 86/267 (32%), Positives = 136/267 (50%)
Query: 288 TWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXX 347
T++D GG++ + +L+ V +PI + F ++G+ P G L HGPPGC
Sbjct: 231 TFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANE 290
Query: 348 XXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSI 407
E+ S G SE +R F +A APSI+F DE D +G+KR
Sbjct: 291 AGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQRE-- 348
Query: 408 TVGERLLSTLLTEMDGL---------EQAKG-ILVLAATNRPHAIDAALMRPGRFDLVLY 457
+ +R+++ LLT MDG + + G +LV+ ATNRP A+D AL R GRF+ +
Sbjct: 349 -MEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIA 407
Query: 458 VPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDI- 516
+ PD +AR EIL V + +++ D + IA T F GA+LE + AG A++ +
Sbjct: 408 LTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILD 467
Query: 517 SATAVRNRHFQTVKDSLKPALTKEEID 543
S + ++ + K L+ +EE++
Sbjct: 468 SRKSEQSGDGEDDKSWLRMPWPEEELE 494
Score = 323 (118.8 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 93/276 (33%), Positives = 139/276 (50%)
Query: 14 KWKAEEAIGG-NRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRA 72
KW + +GG + ++ R ++ P+ + G+ G LLYGPPG GKT + +A
Sbjct: 526 KW---DDVGGLDHLRLQFNRYIVR-PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKA 581
Query: 73 VVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
E GA+ I + +VGESE A+R F +A + A P V+F DE+DAL R
Sbjct: 582 AANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCA----PCVIFFDEVDALTTSR 637
Query: 133 DHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
V R+ +Q +D + +V V+ +TNR D +DPA R GRF
Sbjct: 638 GKEGAWVVERLLNQFLVELDGGERR-----NVYVIGATNRPDVVDPAFLRPGRFGNLLYV 692
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIA-TSCNGYVGADLEALCREATMSAVKR--- 247
R ILK +K P+D +VDL+ IA +C G+ GADL L ++AT AV+
Sbjct: 693 PLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIG 752
Query: 248 SSDANE--CAGVLSVTMEDWRH---ARSVVGPSITR 278
SS+++E + T++ RH A S+V PS+ +
Sbjct: 753 SSESSEDDVTDITQCTIKT-RHFEQALSLVSPSVNK 787
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 488 (176.8 bits), Expect = 1.2e-82, Sum P(2) = 1.2e-82
Identities = 112/274 (40%), Positives = 157/274 (57%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + M D+ A S V PS R V IP VTW DIG L D++++L A+ P+++ F
Sbjct: 549 LCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFK 608
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG++ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 609 ALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 668
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RAR +AP +IFFDE D + +R S + R+++ LLTEMDGLE + + ++AATN
Sbjct: 669 RARNSAPCVIFFDEVDALCPRRSDRESGASV---RVVNQLLTEMDGLENRQQVFIMAATN 725
Query: 438 RPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN---MKVGDDVDLRSIA--E 490
RP ID A++RPGR D LYV PPP E R IL+ T++ + DV+L IA +
Sbjct: 726 RPDIIDPAILRPGRLDKTLYVGLPPP--EDRLAILKTITKDGTRPPLDTDVNLEEIAYSQ 783
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ + +TGA+L L REA I ALR++++ +++
Sbjct: 784 QCDCYTGADLSALVREASICALRQEMALPTTKSK 817
Score = 387 (141.3 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 97/231 (41%), Positives = 132/231 (57%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 585 ALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 644
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 645 SVKGPELLNMYVGESERAVRQVFQRARNSA----PCVIFFDEVDALCPRRSDRESGASVR 700
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 701 VVNQLLTEMDGLENRQ----QVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLA 756
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKR 247
ILK TK + PLD +V+LE IA S C+ Y GADL AL REA++ A+++
Sbjct: 757 ILKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQ 807
Score = 374 (136.7 bits), Expect = 1.2e-82, Sum P(2) = 1.2e-82
Identities = 94/249 (37%), Positives = 140/249 (56%)
Query: 4 KGRIMSEHNEKWKAE---EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYG 60
KG++ S+ E + E +GGN ++ + +++ + + LG+ PRG LL+G
Sbjct: 242 KGKVKSKGPELYHPSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHG 300
Query: 61 PPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PPG GKT L +A+ E + ++ + GESE+ LRE F QA +A P V+
Sbjct: 301 PPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNA----PCVL 356
Query: 121 FIDEIDALCPRRD-HRREQDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPA 178
FIDEIDA+ P+R+ ++ + RI +QL T +D N + T+ V+V+ +TNR D++DPA
Sbjct: 357 FIDEIDAITPKREVASKDMERRIVAQLLTCLDDLNNVAATA--QVLVIGATNRPDSLDPA 414
Query: 179 LRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCR 238
LRR+GRFD R +IL+ +K+ L + D +A GYVGADL ALCR
Sbjct: 415 LRRAGRFDREICLGIPDEAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCR 474
Query: 239 EATMSAVKR 247
EA M V R
Sbjct: 475 EAAMCTVNR 483
Score = 340 (124.7 bits), Expect = 7.5e-28, P = 7.5e-28
Identities = 83/253 (32%), Positives = 127/253 (50%)
Query: 277 TRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
++G + P V +ED+GG + K++ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 247 SKGPELYHPSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCG 305
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F +A L AP ++F DE D +
Sbjct: 306 KTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAIT 365
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT +D L +LV+ ATNRP ++D AL R GRFD
Sbjct: 366 PKREVASKD---MERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFD 422
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ + PD AR +IL+ R +K+ D +A T + GA+L LCREA + +
Sbjct: 423 REICLGIPDEAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVN 482
Query: 514 EDISATAVRNRHF 526
+ + + R +
Sbjct: 483 RVLIKSEEQQRKY 495
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 460 (167.0 bits), Expect = 3.9e-82, Sum P(2) = 3.9e-82
Identities = 108/285 (37%), Positives = 156/285 (54%)
Query: 255 AGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHST 314
A V+ V+ +D+ A + PS R IP TW DIG L ++ +L A+ PIKH
Sbjct: 434 AEVVLVSNDDFFTALPKIQPSSKREGFATIPDTTWADIGALSGIRDELATAIVDPIKHPE 493
Query: 315 AFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRN 374
++ +GI+ G LL GPPGC G EL + YVGESE +R
Sbjct: 494 LYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQ 553
Query: 375 TFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK-GILVL 433
F RAR + P +IFFDE D + +R + S + R+++TLLTE+DGL ++ GI V+
Sbjct: 554 VFVRARSSIPCVIFFDELDALVPRRDDTLSEA---SARVVNTLLTELDGLGSSRQGIYVI 610
Query: 434 AATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETE 493
AATNRP ID A++RPGR + +L+V P R EIL+ R + + + DLR +AEE E
Sbjct: 611 AATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLVRRLPIEFNEDLRRLAEECE 670
Query: 494 LFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALT 538
F+GA+L L R AG A++ ++ F K ++P++T
Sbjct: 671 GFSGADLTSLLRRAGYNAIKR---RDTIKFDDFVAAKSFIRPSVT 712
Score = 392 (143.0 bits), Expect = 3.9e-82, Sum P(2) = 3.9e-82
Identities = 93/231 (40%), Positives = 130/231 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG V+ L +L+ P+ ++ PRG+LL+GPPG GKT + A E G
Sbjct: 167 LGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGVP 226
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RREQD 139
IS S+ GESEKALRE F +A A P ++FIDEIDA+ P+R++ +RE +
Sbjct: 227 FISISAPSIVSGMSGESEKALREHFEEAKRLA----PCLIFIDEIDAITPKRENSQREME 282
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI +QL T MD KT V+V+A+TNR D++D ALRR GRFD R
Sbjct: 283 KRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPVR 342
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
+IL+ T+K+ L ++D + +A G+VGADL L A +A+KR D
Sbjct: 343 EQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLD 393
Score = 383 (139.9 bits), Expect = 3.8e-33, P = 3.8e-33
Identities = 98/266 (36%), Positives = 147/266 (55%)
Query: 15 WKAEEAIGGNRAAVE-ALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAV 73
W A+ G R + A+ + I P LY+S +G+ P G+LL+GPPG GKT L +AV
Sbjct: 468 WADIGALSGIRDELATAIVDPIKHPELYAS----VGITAPTGVLLWGPPGCGKTLLAKAV 523
Query: 74 VRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
E A+ ++V P ++K +VGESE+A+R+ F +A S P V+F DE+DAL PRR
Sbjct: 524 ANESRANFISVKGPELLNK-YVGESERAVRQVFVRARSSI----PCVIFFDELDALVPRR 578
Query: 133 DHR-REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
D E R+ + L T +D S+ + V+A+TNR D IDPA+ R GR +
Sbjct: 579 DDTLSEASARVVNTLLTELDGLGSSRQGI---YVIAATNRPDIIDPAMLRPGRLETLLFV 635
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R EIL+ +++P++ N DL +A C G+ GADL +L R A +A+KR
Sbjct: 636 NLPSPLERVEILQTLVRRLPIEFNEDLRRLAEECEGFSGADLTSLLRRAGYNAIKRRD-- 693
Query: 252 NECAGVLSVTMEDWRHARSVVGPSIT 277
++ +D+ A+S + PS+T
Sbjct: 694 -------TIKFDDFVAAKSFIRPSVT 712
Score = 366 (133.9 bits), Expect = 4.6e-31, P = 4.6e-31
Identities = 91/260 (35%), Positives = 133/260 (51%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V+ D+GGL D+ ++L V P+ + + P RG LLHGPPGC
Sbjct: 162 VSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAA 221
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ S GESE LR F+ A+ AP +IF DE D + KR S
Sbjct: 222 ELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQRE- 280
Query: 407 ITVGERLLSTLLTEMD--GLEQAKG--ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ +R+++ LLT MD LE+ G ++VLAATNRP ++DAAL R GRFD + + P
Sbjct: 281 --MEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPS 338
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
R +ILR TR M++ DD+D +++A+ T F GA+L L AG A++ +
Sbjct: 339 EPVREQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDLLKSN 398
Query: 523 NRHFQTVK--DSLKPALTKE 540
+ ++ D L P++ KE
Sbjct: 399 SGEEMDIEGQDDLSPSV-KE 417
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 472 (171.2 bits), Expect = 9.2e-82, Sum P(2) = 9.2e-82
Identities = 114/300 (38%), Positives = 168/300 (56%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 432 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 491
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 492 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 551
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE + + ++AATN
Sbjct: 552 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLEARQQVFIMAATN 608
Query: 438 RPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN-MK--VGDDVDLRSIAEET 492
RP ID A++RPGR D L+V PPP R IL+ T+N K + DV+L +IA +
Sbjct: 609 RPDIIDPAILRPGRLDKTLFVGLPPP--ADRLAILKTITKNGTKPPLDADVNLEAIAGDL 666
Query: 493 --ELFTGAELEGLCREAGIVALREDISATA---------VRNRHFQTVKDSLKPALTKEE 541
+ +TGA+L L REA I ALR++++ V ++HF+ ++ +++K++
Sbjct: 667 RCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKD 726
Score = 410 (149.4 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 109/266 (40%), Positives = 147/266 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 468 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 527
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 528 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 583
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 584 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 639
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A++ R N
Sbjct: 640 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGN 699
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L V+ + + A V SI++
Sbjct: 700 E-KGELKVSHKHFEEAFKKVRSSISK 724
Score = 376 (137.4 bits), Expect = 9.2e-82, Sum P(2) = 9.2e-82
Identities = 91/231 (39%), Positives = 132/231 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 148 EDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 206
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P ++FIDEIDA+ P+R+ ++
Sbjct: 207 LPILKVAAPEIVSGVSGESEQKLRELFEQAVSNA----PCIIFIDEIDAITPKREVASKD 262
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 263 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 320
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L D +A G+VGADL ALCREA M AV R
Sbjct: 321 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 371
Score = 343 (125.8 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 86/239 (35%), Positives = 121/239 (50%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
RG+ +I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 136 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH--MRHPEVYHHLGVVPPRGVLLHGPPGCG 193
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP IIF DE D +
Sbjct: 194 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAIT 253
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT MD L +LV+ ATNRP ++D AL R GRFD
Sbjct: 254 PKREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFD 310
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + PD +R IL+ R +++ D +A T F GA+L LCREA + A+
Sbjct: 311 REICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 369
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 454 (164.9 bits), Expect = 1.7e-81, Sum P(2) = 1.7e-81
Identities = 99/267 (37%), Positives = 147/267 (55%)
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
+ E +LS+ ED+ A + P+ R +P VTW ++G L+ ++ +L A+ PI
Sbjct: 494 SGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 553
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
K + ++GIS G LL GPPGC G EL + YVGESE
Sbjct: 554 KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 613
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
+R F RAR + P +IFFDE D + +R S S S R+++TLLTE+DGL +GI
Sbjct: 614 SIRQVFTRARASVPCVIFFDELDALVPRRDTSLSES---SSRVVNTLLTELDGLNDRRGI 670
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRN--MKVGDDVDLRSI 488
V+ ATNRP ID A++RPGR D L++ P+ E + +I++ T++ + DVD I
Sbjct: 671 FVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI 730
Query: 489 A--EETELFTGAELEGLCREAGIVALR 513
E+ F+GA+L L RE+ ++AL+
Sbjct: 731 IRNEKCNNFSGADLAALVRESSVLALK 757
Score = 398 (145.2 bits), Expect = 1.7e-81, Sum P(2) = 1.7e-81
Identities = 94/231 (40%), Positives = 130/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG V L ELI P+L+ G++ PRG+LL+GPPG GKTS+ A+ E
Sbjct: 205 KSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQ 264
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH--RR 136
IS SV GESEK +R+ F +A S A P +VF DEIDA+ P+RD +R
Sbjct: 265 VPFISISAPSVVSGMSGESEKKIRDLFDEARSLA----PCLVFFDEIDAITPKRDGGAQR 320
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
E + RI +QL T MD KT+ V+++ +TNR D++D ALRR+GRFD
Sbjct: 321 EMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNE 380
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R ILK + + +D +D +A G+VGADL+AL A A+KR
Sbjct: 381 VSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKR 431
Score = 361 (132.1 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 108/379 (28%), Positives = 172/379 (45%)
Query: 143 ASQLFTLMDSNKPSKTSVPHVVVVASTNRV--DAIDPALRRSGRFDXXXXXXXXXXXXRF 200
A ++FT + S V VV+ + +R+ D I+ L G +
Sbjct: 70 AGEIFTFCLTKDLSLQRVKKVVLQKTIDRMLKDVIESELEEFGSYPGYNNEEEEKPSLEE 129
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCR--EATMSAVKRSSDANECAGVL 258
E+ K + D N ++ TS G+ E++ + VK+S ++ G
Sbjct: 130 ELAKK-NMMIERDTN-EMNKRITSTWSKSGSVSESITETDDPKTEEVKKSKKRSK-EGTC 186
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSR 318
V + + RS P P + + +GG+ D+ +L + + PI H F
Sbjct: 187 KVKRQKIKEDRS---P----------PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLS 233
Query: 319 LGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQR 378
G+ P RG LLHGPPGC + S GESE +R+ F
Sbjct: 234 TGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDE 293
Query: 379 ARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL--EQAKG--ILVLA 434
AR AP ++FFDE D + KR G + + R+++ LLT MD L E+ G ++++
Sbjct: 294 ARSLAPCLVFFDEIDAITPKRDGGAQREME--RRIVAQLLTSMDELTMEKTNGKPVIIIG 351
Query: 435 ATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETEL 494
ATNRP ++DAAL R GRFD + + P+ +R IL+ + N+K+ +D +A+ T
Sbjct: 352 ATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPG 411
Query: 495 FTGAELEGLCREAGIVALR 513
F GA+L+ L AG A++
Sbjct: 412 FVGADLKALVTAAGTCAIK 430
Score = 351 (128.6 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 102/306 (33%), Positives = 157/306 (51%)
Query: 25 RAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH-LTV 83
R +E L I P+ +K+G+ P G+LL+GPPG GKT L +AV E A+ +++
Sbjct: 540 RVRLE-LNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISI 598
Query: 84 ISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQDVRI 142
P ++K +VGESE+++R+ F++A + P V+F DE+DAL PRRD E R+
Sbjct: 599 KGPELLNK-YVGESERSIRQVFTRARASV----PCVIFFDELDALVPRRDTSLSESSSRV 653
Query: 143 ASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEI 202
+ L T +D + + V+ +TNR D IDPA+ R GR D + +I
Sbjct: 654 VNTLLTELDGLNDRRG----IFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDI 709
Query: 203 LKLYTKK--VPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSS-DANECAGV 257
+K TK PL ++VD E I + CN + GADL AL RE+++ A+KR + E V
Sbjct: 710 IKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSV 769
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDI-GGLRDLKKKLQQAVEWPIKHSTAF 316
L ++ SV GV+ E VT D LR +K + +K+
Sbjct: 770 LDNDLDKEFEDLSV-------GVSGEEIIVTMSDFRSALRKIKPSVSDKDR--LKYDRLN 820
Query: 317 SRLGIS 322
++G++
Sbjct: 821 KKMGLT 826
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 187/530 (35%), Positives = 297/530 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAV--VRE-- 76
IGG ++ + E + + L + + GL+ RGLLLYG G GK+ ++ A+ V E
Sbjct: 274 IGGLDRQLQLVEESMEYALGF--RTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEER 331
Query: 77 CGAHLTVISPHS--VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH 134
H+ +I +S V+ +GE+E+ L F +A +H P+++ I+++ LCP++++
Sbjct: 332 SQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHY--PHPTLLLIEDVHNLCPKQEN 389
Query: 135 RREQDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
+ R++ +L+D + PS+ V+A+++++D + P++RR+GR D
Sbjct: 390 S-DLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGA 448
Query: 194 XXXXXRFEILKLYTKKVPLD-ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDAN 252
R EI++ K V ++ ++E +A+ +GYVGADL L A + A N
Sbjct: 449 PSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQA-----QPN 503
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKH 312
+ M + A + + PS R V +E P V W DIGG +L+ +QQA+EWP+ H
Sbjct: 504 P------LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLH 557
Query: 313 STAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALL 372
+ F RLGI P RG L+ GPPGC G EL+SM+VGESE +
Sbjct: 558 ADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAV 617
Query: 373 RNTFQRARLAAPSIIFFDEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGI 430
R F++AR AP+I+FFDE D +G +R G SS+ +V ER+L+ LLTE+DG+E + +
Sbjct: 618 REVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNV 677
Query: 431 LVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAE 490
++AATNRP ID AL+RPGR D +LYV P EAR EIL++ R M + +DVD+ + +
Sbjct: 678 TIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQ 737
Query: 491 ETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKE 540
TE ++GAE++ +C EA + AL + A V+ F+ ++ P + E
Sbjct: 738 LTEGYSGAEIQAVCHEAALRALEQSFEAEDVKWTDFEHALKAVPPRTSPE 787
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 472 (171.2 bits), Expect = 4.3e-81, Sum P(2) = 4.3e-81
Identities = 114/300 (38%), Positives = 168/300 (56%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 549 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 608
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 609 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 668
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE + + ++AATN
Sbjct: 669 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLEARQQVFIMAATN 725
Query: 438 RPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN-MK--VGDDVDLRSIAEET 492
RP ID A++RPGR D L+V PPP R IL+ T+N K + DV+L +IA +
Sbjct: 726 RPDIIDPAILRPGRLDKTLFVGLPPP--ADRLAILKTITKNGTKPPLDADVNLEAIAGDL 783
Query: 493 --ELFTGAELEGLCREAGIVALREDISATA---------VRNRHFQTVKDSLKPALTKEE 541
+ +TGA+L L REA I ALR++++ V ++HF+ ++ +++K++
Sbjct: 784 RCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKD 843
Score = 410 (149.4 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 109/266 (40%), Positives = 147/266 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 585 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 644
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 645 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 700
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 701 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 756
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A++ R N
Sbjct: 757 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGN 816
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L V+ + + A V SI++
Sbjct: 817 E-KGELKVSHKHFEEAFKKVRSSISK 841
Score = 376 (137.4 bits), Expect = 4.3e-81, Sum P(2) = 4.3e-81
Identities = 91/231 (39%), Positives = 132/231 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 265 EDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 323
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P ++FIDEIDA+ P+R+ ++
Sbjct: 324 LPILKVAAPEIVSGVSGESEQKLRELFEQAVSNA----PCIIFIDEIDAITPKREVASKD 379
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 380 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 437
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L D +A G+VGADL ALCREA M AV R
Sbjct: 438 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 488
Score = 343 (125.8 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 86/239 (35%), Positives = 121/239 (50%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
RG+ +I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH--MRHPEVYHHLGVVPPRGVLLHGPPGCG 310
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP IIF DE D +
Sbjct: 311 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAIT 370
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT MD L +LV+ ATNRP ++D AL R GRFD
Sbjct: 371 PKREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFD 427
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + PD +R IL+ R +++ D +A T F GA+L LCREA + A+
Sbjct: 428 REICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 470 (170.5 bits), Expect = 4.4e-81, Sum P(2) = 4.4e-81
Identities = 117/313 (37%), Positives = 168/313 (53%)
Query: 247 RSSD--ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
RS D + E L + D+ A S V PS R V +P VTW DIG L D++++L
Sbjct: 535 RSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTM 594
Query: 305 AVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMY 364
A+ P++ F LG+ G LL GPPGC G EL +MY
Sbjct: 595 AILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 654
Query: 365 VGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
VGESE +R FQRAR +AP +IFFDE D + +R T +V R+++ LLTEMDGL
Sbjct: 655 VGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGL 711
Query: 425 EQAKGILVLAATNRPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN---MKV 479
E + + ++AATNRP ID A++RPGR D L+V PPP R IL+ T+N +
Sbjct: 712 EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP--ADRLAILKTITKNGTRPPL 769
Query: 480 GDDVDLRSIAEET--ELFTGAELEGLCREAGIVALREDI---------SATAVRNRHFQT 528
DV+L ++A + + ++GA+L L REA I ALR+++ V +HF+
Sbjct: 770 DADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRPKGGGDRGELKVSQKHFEE 829
Query: 529 VKDSLKPALTKEE 541
+K +++K++
Sbjct: 830 AFKKVKSSISKKD 842
Score = 399 (145.5 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 105/265 (39%), Positives = 145/265 (54%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A S A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRARSSA----PCVIFFDEVDALCPRRSDRETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSS---DANE 253
ILK TK + PLDA+V+LEA+A C+ Y GADL AL REA++ A+++
Sbjct: 756 ILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRPKGGG 815
Query: 254 CAGVLSVTMEDWRHARSVVGPSITR 278
G L V+ + + A V SI++
Sbjct: 816 DRGELKVSQKHFEEAFKKVKSSISK 840
Score = 378 (138.1 bits), Expect = 4.4e-81, Sum P(2) = 4.4e-81
Identities = 93/231 (40%), Positives = 131/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + LG PRG+LL+GPPG GKT L A+ E
Sbjct: 259 EDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELD 317
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ V GESE+ LRE F QA S+A P V+FIDEIDA+ P+R+ ++
Sbjct: 318 LPILKVAATEVVSGVSGESEQKLRELFEQAVSNA----PCVLFIDEIDAITPKREVASKD 373
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 374 MERRIVAQLLTCMDDLNTTAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 431
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L +A G+VGADL ALCREA M AV R
Sbjct: 432 ASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Score = 339 (124.4 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 82/239 (34%), Positives = 123/239 (51%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
+G+ +++ +V +ED+GG LK+ + + ++H + LG P RG LLHGPPGC
Sbjct: 247 KGLELQVSRVKFEDVGGNDATLKEVCKMLIH--MRHPEVYHHLGAVPPRGVLLHGPPGCG 304
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP ++F DE D +
Sbjct: 305 KTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAIT 364
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT MD L +LV+ ATNRP ++D AL R GRFD
Sbjct: 365 PKREVASKD---MERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFD 421
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + PD +R IL+ R +++ + R +A T F GA+L LCREA + A+
Sbjct: 422 REICLGIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480
Score = 39 (18.8 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 81 LTVISP-HSVHKAHVGESEKALREAFSQASSH 111
LT + H +A GE + E++S + S+
Sbjct: 75 LTALEDEHLAKRARQGEEDNEYTESYSDSDSN 106
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 469 (170.2 bits), Expect = 5.5e-81, Sum P(2) = 5.5e-81
Identities = 117/314 (37%), Positives = 168/314 (53%)
Query: 247 RSSD--ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
RS D + E L + D+ A S V PS R V +P VTW DIG L D++++L
Sbjct: 530 RSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTM 589
Query: 305 AVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMY 364
A+ P++ F LG+ G LL GPPGC G EL +MY
Sbjct: 590 AILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 649
Query: 365 VGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
VGESE +R FQRAR +AP +IFFDE D + +R T +V R+++ LLTEMDGL
Sbjct: 650 VGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGL 706
Query: 425 EQAKGILVLAATNRPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN---MKV 479
E + + ++AATNRP ID A++RPGR D L+V PPP R IL+ T+N +
Sbjct: 707 EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP--ADRLAILKTITKNGTRPPL 764
Query: 480 GDDVDLRSIAEET--ELFTGAELEGLCREAGIVALREDI---------SATAVRNRHFQT 528
DV+L ++A + + ++GA+L L REA I ALR+++ V +HF+
Sbjct: 765 DADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRPKGGGDRGELKVSQKHFEE 824
Query: 529 VKDSLKPALTKEEI 542
+K +++K+ +
Sbjct: 825 AFKKVKSSISKKGV 838
Score = 400 (145.9 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 107/268 (39%), Positives = 147/268 (54%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 579 ALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 638
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A S A P V+F DE+DALCPRR R VR
Sbjct: 639 SVKGPELLNMYVGESERAVRQVFQRARSSA----PCVIFFDEVDALCPRRSDRETGASVR 694
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 695 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 750
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSS---DANE 253
ILK TK + PLDA+V+LEA+A C+ Y GADL AL REA++ A+++
Sbjct: 751 ILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRPKGGG 810
Query: 254 CAGVLSVTMEDWRHARSVVGPSITR-GV 280
G L V+ + + A V SI++ GV
Sbjct: 811 DRGELKVSQKHFEEAFKKVKSSISKKGV 838
Score = 378 (138.1 bits), Expect = 5.5e-81, Sum P(2) = 5.5e-81
Identities = 93/231 (40%), Positives = 131/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + LG PRG+LL+GPPG GKT L A+ E
Sbjct: 259 EDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELD 317
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ V GESE+ LRE F QA S+A P V+FIDEIDA+ P+R+ ++
Sbjct: 318 LPILKVAATEVVSGVSGESEQKLRELFEQAVSNA----PCVLFIDEIDAITPKREVASKD 373
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 374 MERRIVAQLLTCMDDLNTTAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 431
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L +A G+VGADL ALCREA M AV R
Sbjct: 432 ASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Score = 339 (124.4 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 82/239 (34%), Positives = 123/239 (51%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
+G+ +++ +V +ED+GG LK+ + + ++H + LG P RG LLHGPPGC
Sbjct: 247 KGLELQVSRVKFEDVGGNDATLKEVCKMLIH--MRHPEVYHHLGAVPPRGVLLHGPPGCG 304
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP ++F DE D +
Sbjct: 305 KTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAIT 364
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT MD L +LV+ ATNRP ++D AL R GRFD
Sbjct: 365 PKREVASKD---MERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFD 421
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + PD +R IL+ R +++ + R +A T F GA+L LCREA + A+
Sbjct: 422 REICLGIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480
Score = 39 (18.8 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 81 LTVISP-HSVHKAHVGESEKALREAFSQASSH 111
LT + H +A GE + E++S + S+
Sbjct: 75 LTALEDEHLAKRARQGEEDNEYTESYSDSDSN 106
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 172/404 (42%), Positives = 242/404 (59%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
S+H + + IGG + ++ +RE + PL + + G+ PRG+LLYGPPGTGKT
Sbjct: 309 SDHGPQ-VTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTL 367
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ +A+ E GAH+TVI+ P + K + GESE LR+ F++AS +PS++FIDE+DA
Sbjct: 368 IAKAIANEVGAHVTVINGPEIISKFY-GESESRLRQIFAEASLR----RPSIIFIDELDA 422
Query: 128 LCPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S +VV+ +TNR A+D ALRR GRFD
Sbjct: 423 LCPKREGAQNEVEKRVVASLLTLMDGIG-SEGSEGQLVVLGATNRPHALDAALRRPGRFD 481
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANV-DLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ KKVP ++ +A S +GYVGADL ALC+EA + A+
Sbjct: 482 KEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYAL 541
Query: 246 KRS-------SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDL 298
+R+ SD E AG + + D+ V PS R V V++PKV+W DIGGL D+
Sbjct: 542 RRALGKRAHPSDT-EVAGSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDV 600
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
K KL+QAVEWP+KH +F R+GI P +G LL+GPPGC G
Sbjct: 601 KLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGP 660
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
EL + YVGESE +R F++AR+ +PSI+FFDE D + +RG S
Sbjct: 661 ELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVERGNS 704
Score = 411 (149.7 bits), Expect = 9.0e-38, P = 9.0e-38
Identities = 94/240 (39%), Positives = 137/240 (57%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P+VT++ IGGL K +++ VE P+K + F GISP RG LL+GPPG
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G E+ S + GESE+ LR F A L PSIIF DE D + KR G+ +
Sbjct: 373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQN 432
Query: 405 TSITVGERLLSTLLTEMDGL--EQAKG-ILVLAATNRPHAIDAALMRPGRFDLVLYVPPP 461
V +R++++LLT MDG+ E ++G ++VL ATNRPHA+DAAL RPGRFD + + P
Sbjct: 433 E---VEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIP 489
Query: 462 DLEARHEILRVHTRNMKVG-DDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATA 520
+ + R +IL+ + + ++ +A+ + GA+L LC+EAG+ ALR + A
Sbjct: 490 NAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRALGKRA 549
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 456 (165.6 bits), Expect = 6.7e-79, Sum P(2) = 6.7e-79
Identities = 112/300 (37%), Positives = 166/300 (55%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R +P VTW DIG L D++++L A+ + + + F
Sbjct: 548 LCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQFR 607
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 608 VLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA+ +AP +IFFDE D + +R + T +V R+++ LLTEMDGLE + + ++AATN
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRRS-ARETGASV--RVVNQLLTEMDGLETRQQVFIMAATN 724
Query: 438 RPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN-MK--VGDDVDLRSIAEET 492
RP ID A++RPGR D L+V PPP R IL+ T+N K + DV+L +IA +
Sbjct: 725 RPDIIDPAILRPGRLDKTLFVGLPPP--ADRLAILKTITKNGTKPPLDADVNLEAIAGDL 782
Query: 493 --ELFTGAELEGLCREAGIVALREDISATA---------VRNRHFQTVKDSLKPALTKEE 541
+ +TGA+L L REA I AL+++++ + +HF+ +K +++KE+
Sbjct: 783 RCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISQKHFEEAFKKVKSSISKED 842
Score = 411 (149.7 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 108/266 (40%), Positives = 148/266 (55%)
Query: 27 AVEALRELITFPLLY----SSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T +L+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSARETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLETRQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A+K R +
Sbjct: 756 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQEMARQKSGS 815
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L ++ + + A V SI++
Sbjct: 816 E-KGELKISQKHFEEAFKKVKSSISK 840
Score = 372 (136.0 bits), Expect = 6.7e-79, Sum P(2) = 6.7e-79
Identities = 90/231 (38%), Positives = 130/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 264 EDVGGNDTTLKEVCKMLVH-MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELD 322
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S A P ++FIDEIDA+ P+R+ ++
Sbjct: 323 LPILKVAATEIVSGVSGESEQKLRELFEQAVSSA----PCILFIDEIDAITPKREIASKD 378
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 436
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L +A G+VGADL ALCREA M AV R
Sbjct: 437 ASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 349 (127.9 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 90/271 (33%), Positives = 136/271 (50%)
Query: 246 KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGL-RDLKKKLQQ 304
K+ D E G + ++ + A++ +G+ ++I V +ED+GG LK+ +
Sbjct: 229 KKKEDLQEVDGEIEAVLQ--KRAKA-------KGLELQISSVKFEDVGGNDTTLKEVCKM 279
Query: 305 AVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMY 364
V ++H + LG+ P RG LLHGPPGC E+ S
Sbjct: 280 LVH--MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGV 337
Query: 365 VGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
GESE LR F++A +AP I+F DE D + KR +S + R+++ LLT MD L
Sbjct: 338 SGESEQKLRELFEQAVSSAPCILFIDEIDAITPKREIASKD---MERRIVAQLLTCMDDL 394
Query: 425 EQAKG---ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGD 481
+LV+ ATNRP ++D AL R GRFD + + PD +R IL+ R +++ +
Sbjct: 395 NNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPE 454
Query: 482 DVDLRSIAEETELFTGAELEGLCREAGIVAL 512
R +A T F GA+L LCREA + A+
Sbjct: 455 TFHFRHLAHLTPGFVGADLMALCREAAMCAV 485
Score = 37 (18.1 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 87 HSVHKAHVGESEKALREAFSQASS 110
H +A GE + E++S SS
Sbjct: 82 HLAKRARHGEEDNEYTESYSDDSS 105
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 472 (171.2 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 114/300 (38%), Positives = 168/300 (56%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 273 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 332
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 333 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 392
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE + + ++AATN
Sbjct: 393 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLEARQQVFIMAATN 449
Query: 438 RPHAIDAALMRPGRFDLVLYV--PPPDLEARHEILRVHTRN-MK--VGDDVDLRSIAEET 492
RP ID A++RPGR D L+V PPP R IL+ T+N K + DV+L +IA +
Sbjct: 450 RPDIIDPAILRPGRLDKTLFVGLPPP--ADRLAILKTITKNGTKPPLDADVNLEAIAGDL 507
Query: 493 --ELFTGAELEGLCREAGIVALREDISATA---------VRNRHFQTVKDSLKPALTKEE 541
+ +TGA+L L REA I ALR++++ V ++HF+ ++ +++K++
Sbjct: 508 RCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKD 567
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 109/266 (40%), Positives = 147/266 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 309 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 368
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 369 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 424
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 425 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 480
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A++ R N
Sbjct: 481 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGN 540
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L V+ + + A V SI++
Sbjct: 541 E-KGELKVSHKHFEEAFKKVRSSISK 565
Score = 293 (108.2 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 78/205 (38%), Positives = 111/205 (54%)
Query: 46 QKLGLKWPRGLLL-YGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREA 104
Q LGL+ ++ Y G + + RE + ++ + GESE+ LRE
Sbjct: 14 QLLGLECNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESEQKLREL 73
Query: 105 FSQASSHALSGKPSVVFIDEIDALCPRRD-HRREQDVRIASQLFTLMDS-NKPSKTSVPH 162
F QA S+A P ++FIDEIDA+ P+R+ ++ + RI +QL T MD N + T+
Sbjct: 74 FEQAVSNA----PCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATA--R 127
Query: 163 VVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIA 222
V+V+ +TNR D++DPALRR+GRFD R IL+ +K+ L D +A
Sbjct: 128 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLA 187
Query: 223 TSCNGYVGADLEALCREATMSAVKR 247
G+VGADL ALCREA M AV R
Sbjct: 188 HLTPGFVGADLMALCREAAMCAVNR 212
Score = 242 (90.2 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 62/157 (39%), Positives = 86/157 (54%)
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
E+ S GESE LR F++A AP IIF DE D + KR +S + R+++ LL
Sbjct: 57 EIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKD---MERRIVAQLL 113
Query: 419 TEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTR 475
T MD L +LV+ ATNRP ++D AL R GRFD + + PD +R IL+ R
Sbjct: 114 TCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCR 173
Query: 476 NMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+++ D +A T F GA+L LCREA + A+
Sbjct: 174 KLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 210
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 527 (190.6 bits), Expect = 2.8e-66, Sum P(2) = 2.8e-66
Identities = 118/304 (38%), Positives = 175/304 (57%)
Query: 249 SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
S +E G L ++ ED+ A S + P+ R +P V+W+DIG L +++K+L+ ++ +
Sbjct: 492 SALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILY 551
Query: 309 PIKHSTAFSRLGIS-PVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGE 367
PIK + F+ LGI +G LL GPPGC G EL +MYVGE
Sbjct: 552 PIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGE 611
Query: 368 SEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
SE +R FQRAR + P +IFFDE D + KR S+ G RL++ LLTEMDG+E
Sbjct: 612 SERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSG---GARLVNQLLTEMDGVEGR 668
Query: 428 KGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRN---MKVGDDVD 484
+ + ++ ATNRP +DAA++RPGR D +L+V P +E R +ILR T+N +G+D+D
Sbjct: 669 QKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDID 728
Query: 485 LRSIAEETEL--FTGAELEGLCREAGIVALR-----EDISATAVRNRHFQTVKDSLKPAL 537
IA+ EL FTGA+L L E+ ++AL+ D S V RHF+ ++P++
Sbjct: 729 FHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVKGVGMRHFREAASRIRPSV 788
Query: 538 TKEE 541
T+ +
Sbjct: 789 TEAD 792
Score = 325 (119.5 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 90/262 (34%), Positives = 133/262 (50%)
Query: 26 AAVEALREL---ITFPLLYSSQAQKLGLKW-PRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
A VE ++L I +P+ + LG+ P+G+LL GPPG GKT L +AV E G +
Sbjct: 537 ALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNF 596
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD-V 140
+ + +VGESE+A+R F +A +P V+F DEIDAL P+R H
Sbjct: 597 ISVKGPELLNMYVGESERAVRTVFQRARD----SQPCVIFFDEIDALVPKRSHGESSGGA 652
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
R+ +QL T MD + + V ++ +TNR D +D A+ R GR D R
Sbjct: 653 RLVNQLLTEMDGVEGRQK----VFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRV 708
Query: 201 EILKLYTK---KVPLDANVDLEAIAT--SCNGYVGADLEALCREATMSAVKRSSDANECA 255
+IL+ TK + L ++D IA G+ GADL AL E+++ A++ N+
Sbjct: 709 DILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLEND-E 767
Query: 256 GVLSVTMEDWRHARSVVGPSIT 277
V V M +R A S + PS+T
Sbjct: 768 SVKGVGMRHFREAASRIRPSVT 789
Score = 174 (66.3 bits), Expect = 2.8e-66, Sum P(2) = 2.8e-66
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 19 EAIGG-NRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E IGG +R +E R + L LG+ PRG +++GPPG GKT +AV E
Sbjct: 206 EHIGGADRQFLEVCR--LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
+ ++ + GE+E+ +R F A ++ P ++ +D+IDA+ PRR+ +R
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNS----PCILILDDIDAIAPRRETAQR 319
Query: 137 EQDVRIASQLFTLMD 151
E + R+ SQL + +D
Sbjct: 320 EMERRVVSQLCSSLD 334
Score = 158 (60.7 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 39/112 (34%), Positives = 60/112 (53%)
Query: 429 GILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSI 488
G+LV+ T+RP A+D L R GRF+ + + PD AR +IL + + + DV L+ I
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQI 428
Query: 489 AEETELFTGAELEGLCREAGIVALREDISATAVRNR-HFQTVKDSLKPALTK 539
A+ T + GA+L+ L REA VA+ V+N H + +K L +
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDR 480
Score = 153 (58.9 bits), Expect = 4.6e-64, Sum P(2) = 4.6e-64
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 122 IDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
+DE+ L PR ++Q + + + P+ V+V+ +T+R DA+D LRR
Sbjct: 333 LDEL-VLPPREKPLKDQ-LTFGDDGSVAIIGDSPTAAGAG-VLVIGTTSRPDAVDGGLRR 389
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
+GRF+ R +IL+ K V L +V L+ IA GYVGADL+AL REA
Sbjct: 390 AGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIAKLTPGYVGADLQALIREAA 448
Query: 242 MSAVKRSSD 250
A+ R D
Sbjct: 449 KVAIDRVFD 457
Score = 152 (58.6 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 270 SVVGPSITRGV-----TVEIPK---VTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLG 320
S P++ RG+ T+ P+ V +E IGG R + + A+ +K F+ LG
Sbjct: 179 SAAPPALPRGLGAVSDTIS-PRESHVKFEHIGGADRQFLEVCRLAMH--LKRPKTFATLG 235
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ P RG ++HGPPGC EL S GE+E +R F A+
Sbjct: 236 VDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAK 295
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+P I+ D+ D + +R + + R++S L + +D L
Sbjct: 296 QNSPCILILDDIDAIAPRR---ETAQREMERRVVSQLCSSLDEL 336
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 527 (190.6 bits), Expect = 2.8e-66, Sum P(2) = 2.8e-66
Identities = 118/304 (38%), Positives = 175/304 (57%)
Query: 249 SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
S +E G L ++ ED+ A S + P+ R +P V+W+DIG L +++K+L+ ++ +
Sbjct: 492 SALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILY 551
Query: 309 PIKHSTAFSRLGIS-PVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGE 367
PIK + F+ LGI +G LL GPPGC G EL +MYVGE
Sbjct: 552 PIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGE 611
Query: 368 SEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
SE +R FQRAR + P +IFFDE D + KR S+ G RL++ LLTEMDG+E
Sbjct: 612 SERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSG---GARLVNQLLTEMDGVEGR 668
Query: 428 KGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRN---MKVGDDVD 484
+ + ++ ATNRP +DAA++RPGR D +L+V P +E R +ILR T+N +G+D+D
Sbjct: 669 QKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDID 728
Query: 485 LRSIAEETEL--FTGAELEGLCREAGIVALR-----EDISATAVRNRHFQTVKDSLKPAL 537
IA+ EL FTGA+L L E+ ++AL+ D S V RHF+ ++P++
Sbjct: 729 FHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVKGVGMRHFREAASRIRPSV 788
Query: 538 TKEE 541
T+ +
Sbjct: 789 TEAD 792
Score = 325 (119.5 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 90/262 (34%), Positives = 133/262 (50%)
Query: 26 AAVEALREL---ITFPLLYSSQAQKLGLKW-PRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
A VE ++L I +P+ + LG+ P+G+LL GPPG GKT L +AV E G +
Sbjct: 537 ALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNF 596
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD-V 140
+ + +VGESE+A+R F +A +P V+F DEIDAL P+R H
Sbjct: 597 ISVKGPELLNMYVGESERAVRTVFQRARD----SQPCVIFFDEIDALVPKRSHGESSGGA 652
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
R+ +QL T MD + + V ++ +TNR D +D A+ R GR D R
Sbjct: 653 RLVNQLLTEMDGVEGRQK----VFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRV 708
Query: 201 EILKLYTK---KVPLDANVDLEAIAT--SCNGYVGADLEALCREATMSAVKRSSDANECA 255
+IL+ TK + L ++D IA G+ GADL AL E+++ A++ N+
Sbjct: 709 DILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLEND-E 767
Query: 256 GVLSVTMEDWRHARSVVGPSIT 277
V V M +R A S + PS+T
Sbjct: 768 SVKGVGMRHFREAASRIRPSVT 789
Score = 174 (66.3 bits), Expect = 2.8e-66, Sum P(2) = 2.8e-66
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 19 EAIGG-NRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E IGG +R +E R + L LG+ PRG +++GPPG GKT +AV E
Sbjct: 206 EHIGGADRQFLEVCR--LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
+ ++ + GE+E+ +R F A ++ P ++ +D+IDA+ PRR+ +R
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNS----PCILILDDIDAIAPRRETAQR 319
Query: 137 EQDVRIASQLFTLMD 151
E + R+ SQL + +D
Sbjct: 320 EMERRVVSQLCSSLD 334
Score = 158 (60.7 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 39/112 (34%), Positives = 60/112 (53%)
Query: 429 GILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSI 488
G+LV+ T+RP A+D L R GRF+ + + PD AR +IL + + + DV L+ I
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQI 428
Query: 489 AEETELFTGAELEGLCREAGIVALREDISATAVRNR-HFQTVKDSLKPALTK 539
A+ T + GA+L+ L REA VA+ V+N H + +K L +
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDR 480
Score = 153 (58.9 bits), Expect = 4.6e-64, Sum P(2) = 4.6e-64
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 122 IDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
+DE+ L PR ++Q + + + P+ V+V+ +T+R DA+D LRR
Sbjct: 333 LDEL-VLPPREKPLKDQ-LTFGDDGSVAIIGDSPTAAGAG-VLVIGTTSRPDAVDGGLRR 389
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
+GRF+ R +IL+ K V L +V L+ IA GYVGADL+AL REA
Sbjct: 390 AGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIAKLTPGYVGADLQALIREAA 448
Query: 242 MSAVKRSSD 250
A+ R D
Sbjct: 449 KVAIDRVFD 457
Score = 152 (58.6 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 270 SVVGPSITRGV-----TVEIPK---VTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLG 320
S P++ RG+ T+ P+ V +E IGG R + + A+ +K F+ LG
Sbjct: 179 SAAPPALPRGLGAVSDTIS-PRESHVKFEHIGGADRQFLEVCRLAMH--LKRPKTFATLG 235
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ P RG ++HGPPGC EL S GE+E +R F A+
Sbjct: 236 VDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAK 295
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+P I+ D+ D + +R + + R++S L + +D L
Sbjct: 296 QNSPCILILDDIDAIAPRR---ETAQREMERRVVSQLCSSLDEL 336
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 588 (212.0 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 142/428 (33%), Positives = 230/428 (53%)
Query: 112 ALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNR 171
A+ + V+ I + DAL P A + +L+ S + + VV++A++ R
Sbjct: 299 AVRHEGGVLLITDADALLPAA----------AEPVASLILSELRTAVATAGVVLIATSAR 348
Query: 172 VDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGA 231
D +D LR D R +L+ VP +++L+ IA+ G+V A
Sbjct: 349 PDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVPT-GDLNLDEIASRTPGFVVA 407
Query: 232 DLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIP--KVTW 289
DL AL REA + A R+S A+ +L +D A +V+ P ++R + E+ VT
Sbjct: 408 DLAALVREAALRAASRAS-ADGRPPMLH--QDDLLGALTVIRP-LSRSASDEVTVGDVTL 463
Query: 290 EDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXX 349
+D+G + K+ L +AV WP++H F+RLG+ P RG LL+GPPGC
Sbjct: 464 DDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQ 523
Query: 350 XXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITV 409
G+EL +VG SE +R F+RAR +APS++F DE D + +RG S + ++
Sbjct: 524 LSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQSFDSGVS- 582
Query: 410 GERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEI 469
+R+++ LLTE+DG++ + +++L ATNRP ID AL+RPGR + +++V PPD AR EI
Sbjct: 583 -DRVVAALLTELDGIDPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREI 641
Query: 470 LRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNRHFQTV 529
LR +++ + DVDL +A + ++ A+ L REA + A+R I A V T
Sbjct: 642 LRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVTAADLATA 701
Query: 530 KDSLKPAL 537
+++++ +L
Sbjct: 702 RETVRASL 709
Score = 402 (146.6 bits), Expect = 7.1e-36, P = 7.1e-36
Identities = 99/249 (39%), Positives = 139/249 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+G AA +AL E + +PL + +LG++ PRG+LLYGPPG GKT +VRA+
Sbjct: 466 VGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLS 525
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + + VG SEKA+RE F +A A PS+VF+DE+DAL PRR + V
Sbjct: 526 VHAVKGSELMDKWVGSSEKAVRELFRRARDSA----PSLVFLDELDALAPRRGQSFDSGV 581
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ + L T +D P + VV++ +TNR D IDPAL R GR +
Sbjct: 582 SDRVVAALLTELDGIDPLRD----VVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAA 637
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-NECAGV 257
R EIL+ K +PL ++VDL+ +A +GY AD AL REA ++A++RS DA N A
Sbjct: 638 RREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVTAAD 697
Query: 258 LSVTMEDWR 266
L+ E R
Sbjct: 698 LATARETVR 706
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/242 (22%), Positives = 96/242 (39%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
+ +G S V++ P++ E++ G + KL + ++ + LG G L+
Sbjct: 193 AAMGTSTAGQVSISSPEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLV 252
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
GP G G E+ ++ G+ + + Q R ++
Sbjct: 253 SGPAGVGKATLVRAVCDGRRLVTLD--GPEIGALAAGDRVKAVASAVQAVRHEG-GVLLI 309
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
+AD + E + S +L+E+ G++++A + RP +DA L P
Sbjct: 310 TDADALLP----------AAAEPVASLILSELRTAVATAGVVLIATSARPDQLDARLRSP 359
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
D L +P PD R +L + GD ++L IA T F A+L L REA +
Sbjct: 360 ELCDRELGLPLPDAATRKSLLEALLNPVPTGD-LNLDEIASRTPGFVVADLAALVREAAL 418
Query: 510 VA 511
A
Sbjct: 419 RA 420
Score = 96 (38.9 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 36/113 (31%), Positives = 49/113 (43%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC- 77
E + G + L E + L Q LG G+L+ GP G GK +LVRAV C
Sbjct: 213 EELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV---CD 269
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
G L + + G+ KA+ A QA H + V+ I + DAL P
Sbjct: 270 GRRLVTLDGPEIGALAAGDRVKAVASAV-QAVRH----EGGVLLITDADALLP 317
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 403 (146.9 bits), Expect = 8.2e-64, Sum P(3) = 8.2e-64
Identities = 99/297 (33%), Positives = 156/297 (52%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
+ +T + A + + P+ R +P TW ++G L++++KKL+ A+ PI+ F+
Sbjct: 473 ICITFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFA 532
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LGI P G LL GPPGC G EL + YVGESE +R F
Sbjct: 533 ALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFS 592
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATN 437
RA+ +AP I+FFDE D + R + S + + R+++ LLTE+DG+ +GI V+ ATN
Sbjct: 593 RAKSSAPCILFFDELDALVPTRDFTMSGATS---RVVNALLTELDGVGDRQGIYVIGATN 649
Query: 438 RPHAIDAALMRPGRFDLVLYVPPPDLEARHEILR-VHTRNMKVGDDVD-----LRSIAEE 491
RP +ID A+ RPGR +YV P E R +ILR ++ + G D + +A +
Sbjct: 650 RPDSIDEAIRRPGRLGTDIYVGLPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARD 709
Query: 492 TEL--FTGAELEGL---CREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
FTGA+L L EA ++ +++D A + ++ D +KP++ ++ID
Sbjct: 710 PRCGKFTGADLRQLLTAASEACMIRVQDD-EAPMISEEDWERALDEVKPSV--KDID 763
Score = 288 (106.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 90/275 (32%), Positives = 134/275 (48%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W A+ R +E I P+ + LG+K G+LL+GPPG GKT + +
Sbjct: 501 NTTWSEVGALQNVRKKLEYA---IVQPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAK 557
Query: 72 AVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
AV A+ +++ P ++K +VGESE +R+ FS+A S A P ++F DE+DAL P
Sbjct: 558 AVANASKANFISIKGPELLNK-YVGESEYNVRQLFSRAKSSA----PCILFFDELDALVP 612
Query: 131 RRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXX 189
RD R+ + L T +D + + V+ +TNR D+ID A+RR GR
Sbjct: 613 TRDFTMSGATSRVVNALLTELDGVGDRQG----IYVIGATNRPDSIDEAIRRPGRLGTDI 668
Query: 190 XXXXXXXXXRFEILK-LYTKKVP----LDA-NVDLEAIATS--CNGYVGADLEALCREAT 241
RF+IL+ +Y VP DA +E +A C + GADL L A+
Sbjct: 669 YVGLPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCGKFTGADLRQLLTAAS 728
Query: 242 MSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSI 276
+ + R D +E ++ EDW A V PS+
Sbjct: 729 EACMIRVQD-DEAP---MISEEDWERALDEVKPSV 759
Score = 284 (105.0 bits), Expect = 8.2e-64, Sum P(3) = 8.2e-64
Identities = 75/216 (34%), Positives = 116/216 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG +EAL + + PL + ++G K +LL+GP GTGKT++VRA+
Sbjct: 197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RRE 137
+S S+ GESEK +REAF +A A P ++F+DE+D + + D ++
Sbjct: 257 CAFVPVSATSLVSGISGESEKNIREAFDEAIRLA----PCLLFLDEVDVVAGKMDGAQKA 312
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+VR++S++ +D + +VVV+A+TNR D+I+P +RR RF
Sbjct: 313 MEVRMSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RFQELEMSMPDEAA 370
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADL 233
R IL+ T+ L +VD A+A GYVGADL
Sbjct: 371 -RESILRTMTRNKRLSDDVDFTALARLTPGYVGADL 405
Score = 269 (99.8 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 68/217 (31%), Positives = 103/217 (47%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
PK+ ED+GG+ + + L++ + P++ ++R+G P LLHGP G
Sbjct: 194 PKL--EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRAL 251
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
L S GESE +R F A AP ++F DE DVV K G+
Sbjct: 252 ADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQK 311
Query: 405 T-SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDL 463
+ + + L + + ++V+AATNRP +I+ + R RF L + PD
Sbjct: 312 AMEVRMSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RFQ-ELEMSMPDE 368
Query: 464 EARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAEL 500
AR ILR TRN ++ DDVD ++A T + GA+L
Sbjct: 369 AARESILRTMTRNKRLSDDVDFTALARLTPGYVGADL 405
Score = 37 (18.1 bits), Expect = 8.2e-64, Sum P(3) = 8.2e-64
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVE 29
+S R+++ E+ KA+E G + A+E
Sbjct: 62 DSIERVLTYRKEELKADEDGGDSDEALE 89
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 584 (210.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 127/318 (39%), Positives = 183/318 (57%)
Query: 211 PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARS 270
PL+ ++D +A +G+ G DL +L + A + + +E AR
Sbjct: 396 PLELHLD---VARHTHGFTGGDLCSLLKAAKFARGRTH-------------LERVNDARK 439
Query: 271 VVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLH 330
+ P+ R +E+P V+W DIGG +LK ++QQAV WP KH AF R GI P G LL+
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 331 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFD 390
GPPGC G EL+S +VG+SE +R+ F RAR AP+I+FFD
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFD 559
Query: 391 EADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPG 450
E D VG+ RG S+ ++ +R+L+ LLTE+DGLE++ +++LAATNRP +D+AL+RPG
Sbjct: 560 EIDAVGSSRGSEKSSGVS--DRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPG 617
Query: 451 RFDLVLYVPPPDLEARHEILRVHTRNMKVGDDV-DLRSIAEETELFTGAELEGLCREAGI 509
R D +YV P R IL + T+ MK D V + + E+T ++GAEL +CR A +
Sbjct: 618 RLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAM 677
Query: 510 VALREDISATAVRNRHFQ 527
A+RE I AT V+ HF+
Sbjct: 678 FAMRESIDATIVQWTHFE 695
Score = 345 (126.5 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 89/275 (32%), Positives = 137/275 (49%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
I+ N W IGGN +++ + +P + ++ G+ P G+LLYGPPG K
Sbjct: 450 ILEVPNVSWND---IGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSK 506
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T + RA+ E + + + VG+SEKA+R+ FS+A A P++VF DEID
Sbjct: 507 TLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVA----PTIVFFDEID 562
Query: 127 ALCPRRDHRREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
A+ R + V R+ +QL T +D + S V+++A+TNR D +D AL R GR
Sbjct: 563 AVGSSRGSEKSSGVSDRVLAQLLTELDGLEKSS----RVILLAATNRPDQLDSALLRPGR 618
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANV-DLEAIATSCNGYVGADLEALCREATMS 243
D R IL++ TKK+ D V ++ + +GY GA+L A+CR A M
Sbjct: 619 LDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMF 678
Query: 244 AVKRSSDANECAGVLSVTMEDWRHARSVVGPSITR 278
A++ S DA T+ W H + ++R
Sbjct: 679 AMRESIDA---------TIVQWTHFEQALAAVVSR 704
Score = 59 (25.8 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG A + L + + P+ QK + P +L++G PG+GKT L++ V
Sbjct: 248 IGGCFTAKQVLEDYVISPV-----RQK---ESPCSVLIWGLPGSGKTLLLKEVALVLSGS 299
Query: 81 LTVI 84
T I
Sbjct: 300 TTYI 303
Score = 40 (19.1 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 116 KPSVVFIDEIDALCPRRDHRREQD 139
KPS+V + +A+ +D R QD
Sbjct: 7 KPSLVTCPQCNAVVLTKDSLRHQD 30
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 171/541 (31%), Positives = 255/541 (47%)
Query: 29 EALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHS 88
E +++L F LL SS ++ W GL+L+G GTGKT L+ V R S
Sbjct: 222 EQVKKLNDF-LLVSSSDRESNTGW-HGLVLHGGSGTGKTMLLDHVSRTRWG--------S 271
Query: 89 VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVR-----IA 143
VH+ + K +++ F + A S +V ID++D L + R + +
Sbjct: 272 VHRVKASDKSKDIQDIFQTVTGQARS----IVLIDDLDELIDKERANRSTVINALVEGLV 327
Query: 144 SQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEIL 203
S + D KP K +V+ A + + + LRR R R ++
Sbjct: 328 SVRQAICDKEKPPKV----IVIAACRDYITIVPEKLRRPYRLQRAILLPPMDMSRRTAVI 383
Query: 204 KLYTKKVPLDANVDLEA-IATSCNGYVGADLEALCREAT-MSAVKRSSDANECAGVLSVT 261
D + ++ + Y G DL+ L + A K E AG S
Sbjct: 384 SSLNPPFHPDVKEQIICDLSDRTHAYNGLDLQKLLSTIDYLVAAKLHHMQPEAAGTESDV 443
Query: 262 M-----------EDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
+ A + P+ + V ++ P V W+DI G +K+ L+ AV +
Sbjct: 444 RPKPPADTAFYTDSLEAALLEIRPTAMQDVNLKPPPVRWDDISGQESVKRDLRLAVHFIT 503
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+ + P +G LL+GPPGC GAEL +MYVGESE
Sbjct: 504 RPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGESER 563
Query: 371 LLRNTFQRARLAAPSIIFFDEAD-VVGAKRG-GSSSTSITV--GERLLSTLLTEMDGLEQ 426
+R+ F RAR AAPS+IFFDE D + G+++G GS T G +L+TLL EMDG E
Sbjct: 564 QIRDLFSRARAAAPSMIFFDEIDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFED 623
Query: 427 AKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLR 486
+G+ VLAATNRPHA+D A+MRPGRFD ++YVPPPD AR ILR ++ ++ DVD
Sbjct: 624 LRGVFVLAATNRPHALDPAIMRPGRFDEIIYVPPPDPAAREAILRKNSAGCQLAPDVDFA 683
Query: 487 SIAEETELFTGAELEGLCREAGIVALREDI----SATAVRNRHFQTVKDSLKPALTKEEI 542
+A+ TE +GAE+ G C+ AG +A+R + S A+ F+ + +TK+ +
Sbjct: 684 RLAQLTEGNSGAEVAGTCQSAGKLAMRRSLDEPSSEGAISMADFEAAIAGQRKQITKQML 743
Query: 543 D 543
+
Sbjct: 744 E 744
Score = 269 (99.8 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 80/262 (30%), Positives = 120/262 (45%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
I G + LR + F + QK P+G LLYGPPG KT +A+ E G +
Sbjct: 485 ISGQESVKRDLRLAVHFITRPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLN 544
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + +VGESE+ +R+ FS+A + A PS++F DEID++ R
Sbjct: 545 FFAVKGAELLNMYVGESERQIRDLFSRARAAA----PSMIFFDEIDSIAGSRKGFGSDGG 600
Query: 141 RIASQ----LFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
SQ + T + + + V V+A+TNR A+DPA+ R GRFD
Sbjct: 601 GATSQGGLNVLTTLLNEMDGFEDLRGVFVLAATNRPHALDPAIMRPGRFDEIIYVPPPDP 660
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAG 256
R IL+ + L +VD +A G GA++ C+ A A++RS D G
Sbjct: 661 AAREAILRKNSAGCQLAPDVDFARLAQLTEGNSGAEVAGTCQSAGKLAMRRSLDEPSSEG 720
Query: 257 VLSVTMEDWRHARSVVGPSITR 278
+S M D+ A + IT+
Sbjct: 721 AIS--MADFEAAIAGQRKQITK 740
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 596 (214.9 bits), Expect = 5.0e-57, P = 5.0e-57
Identities = 158/489 (32%), Positives = 236/489 (48%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVR------ECGAHLTVISPHSVHKAHVGESEKA 100
K + P +L+YGPPG+GKT L RA + + AH+ ++S ++ V
Sbjct: 587 KFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHV 646
Query: 101 LREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFT--LMD------S 152
L ++ HA PSV+ +D++D++ + + T L D
Sbjct: 647 LSSVIAEGLEHA----PSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGE 702
Query: 153 NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL 212
+ S + + VAS ++ I L SGRFD R ILK +K L
Sbjct: 703 YRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLL 762
Query: 213 DANVD-LEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSV 271
D + D L +A C GY DLE L A +A+ R ++ ED+ A
Sbjct: 763 DCSEDILLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHD 822
Query: 272 VGPSITRGVTV---EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR--- 325
P R +T E ++ WED+GG+ D+K +++ +E P K F++ SP+R
Sbjct: 823 FVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAK---SPLRLRS 879
Query: 326 GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPS 385
LL+GPPGC G EL + Y+G SE +R+ F +A AAP
Sbjct: 880 NVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPC 939
Query: 386 IIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAA 445
I+FFDE D + KRG +T +T +R+++ LTE+DG+E G+ V AAT+RP +D A
Sbjct: 940 ILFFDEFDSIAPKRG-HDNTGVT--DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPA 996
Query: 446 LMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCR 505
L+RPGR D +L P R EIL V +R + + DD+DL IA TE F+GA+L+ L
Sbjct: 997 LLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLS 1056
Query: 506 EAGIVALRE 514
+A + A+ E
Sbjct: 1057 DAQLAAVHE 1065
Score = 321 (118.1 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 80/229 (34%), Positives = 125/229 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG A++E+I P + K L+ +LLYGPPG GKT +V A C
Sbjct: 844 EDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
Query: 79 AH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
++V P ++K ++G SE+A+R+ FS+A++ A P ++F DE D++ P+R H
Sbjct: 904 LRFISVKGPELLNK-YIGASEQAVRDIFSKAAAAA----PCILFFDEFDSIAPKRGHDNT 958
Query: 138 QDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ +Q T +D + + V V A+T+R D +DPAL R GR D
Sbjct: 959 GVTDRVVNQFLTELDGVEV----LTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSP 1014
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R EIL + ++K+ + ++DLE IA G+ GADL+AL +A ++AV
Sbjct: 1015 PERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAV 1063
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 376 (137.4 bits), Expect = 5.0e-57, Sum P(2) = 5.0e-57
Identities = 91/231 (39%), Positives = 132/231 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 159 EDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 217
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P ++FIDEIDA+ P+R+ ++
Sbjct: 218 LPILKVAAPEIVSGVSGESEQKLRELFEQAVSNA----PCIIFIDEIDAITPKREVASKD 273
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 274 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 331
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L D +A G+VGADL ALCREA M AV R
Sbjct: 332 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 382
Score = 343 (125.8 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 86/239 (35%), Positives = 121/239 (50%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
RG+ +I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 147 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH--MRHPEVYHHLGVVPPRGVLLHGPPGCG 204
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP IIF DE D +
Sbjct: 205 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAIT 264
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGLEQAKG---ILVLAATNRPHAIDAALMRPGRFD 453
KR +S + R+++ LLT MD L +LV+ ATNRP ++D AL R GRFD
Sbjct: 265 PKREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFD 321
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + PD +R IL+ R +++ D +A T F GA+L LCREA + A+
Sbjct: 322 REICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 380
Score = 266 (98.7 bits), Expect = 5.0e-57, Sum P(2) = 5.0e-57
Identities = 56/142 (39%), Positives = 76/142 (53%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 443 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 502
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 503 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 562
Query: 378 RARLAAPSIIFFDEADVVGAKR 399
RA+ +AP +IFFDE D + +R
Sbjct: 563 RAKNSAPCVIFFDEVDALCPRR 584
Score = 217 (81.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 49/113 (43%), Positives = 67/113 (59%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 479 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 538
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R
Sbjct: 539 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDR 587
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 593 (213.8 bits), Expect = 5.6e-57, P = 5.6e-57
Identities = 159/476 (33%), Positives = 242/476 (50%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ +S + + S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL----CADSSRTVETKLQTTFSRARRC 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+P V+ + +D L RD E D R+ + L L+D + S+ P ++VVA+T+RV
Sbjct: 522 RPVVLLLTALDLLGRDRDGLGE-DARVVATLRHLLLDEDPLSRC--PPLMVVATTSRVQD 578
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+ +R + F R +L+ T +PL V+L +A C G+V DL
Sbjct: 579 LPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLY 636
Query: 235 ALCREATMSAVKR-------SSDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV-E 283
AL A+ +A R S+ +E CA + ED+ A + + ++ V +
Sbjct: 637 ALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPK 696
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
IP V+W D+GGL+D+KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 697 IPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKA 754
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S
Sbjct: 755 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 814
Query: 404 STSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYV-PPPD 462
+ V +R++S LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V D
Sbjct: 815 DSG-GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAE--ETELFTGAELEGLCREAGIVALREDI 516
++ +L TR K+ V L ++ + +L TGA+L LC +A + AL+ +
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQL-TGADLYSLCSDAMMTALKRRV 928
Score = 343 (125.8 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 96/268 (35%), Positives = 142/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 705 VGGLQDVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 762
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 763 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 817
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 818 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+A+V L + C + GADL +LC +A M+A+KR D E
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE 933
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 934 GLEPRSSALLLTMEDLLQAAARLQPSVS 961
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 593 (213.8 bits), Expect = 5.6e-57, P = 5.6e-57
Identities = 159/476 (33%), Positives = 242/476 (50%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ +S + + S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL----CADSSRTVETKLQTTFSRARRC 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+P V+ + +D L RD E D R+ + L L+D + S+ P ++VVA+T+RV
Sbjct: 522 RPVVLLLTALDLLGRDRDGLGE-DARVVATLRHLLLDEDPLSRC--PPLMVVATTSRVQD 578
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+ +R + F R +L+ T +PL V+L +A C G+V DL
Sbjct: 579 LPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLY 636
Query: 235 ALCREATMSAVKR-------SSDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV-E 283
AL A+ +A R S+ +E CA + ED+ A + + ++ V +
Sbjct: 637 ALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPK 696
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
IP V+W D+GGL+D+KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 697 IPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKA 754
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S
Sbjct: 755 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 814
Query: 404 STSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYV-PPPD 462
+ V +R++S LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V D
Sbjct: 815 DSG-GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAE--ETELFTGAELEGLCREAGIVALREDI 516
++ +L TR K+ V L ++ + +L TGA+L LC +A + AL+ +
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQL-TGADLYSLCSDAMMTALKRRV 928
Score = 343 (125.8 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 96/268 (35%), Positives = 142/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 705 VGGLQDVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 762
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 763 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 817
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 818 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+A+V L + C + GADL +LC +A M+A+KR D E
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE 933
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 934 GLEPRSSALLLTMEDLLQAAARLQPSVS 961
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 172/524 (32%), Positives = 256/524 (48%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
SE + W + G A V L ++ P L A G +LL GPPG GKT+
Sbjct: 14 SEKSTLWSSLSP-PGLEALVSELCAVLK-PRLQPGGALLTGTS---SVLLRGPPGCGKTT 68
Query: 69 LVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL 128
+V A + G HL + S+ G E L+ FS+A +P+V+ + +D L
Sbjct: 69 VVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRC----RPAVLLLTAVDLL 124
Query: 129 CPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
RD E D R+ + L L+ P S P ++VVA+T+R + PA ++ F
Sbjct: 125 GRDRDGLGE-DARVVAALRHLLLDEDPLN-SCPPLMVVATTSRAQDL-PADVQTA-FPHE 180
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR- 247
R IL+ T +PL V+L +A C G+V DL AL ++ +A R
Sbjct: 181 LEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRI 240
Query: 248 ----------SSDANE-CAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGL 295
D E CA + ED+ A + + ++ V +IP V+W D+GGL
Sbjct: 241 KNLGLAGGLTEEDEGELCAAGFPLLAEDFGQALELQQTAHSQAVGAPKIPSVSWHDVGGL 300
Query: 296 RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXX 355
+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 301 QEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSV 358
Query: 356 XGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLS 415
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S + V +R++S
Sbjct: 359 KGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSG-GVMDRVVS 417
Query: 416 TLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP-PDLEARHEILRVHT 474
LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V D ++ +L T
Sbjct: 418 QLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAIT 477
Query: 475 RNMKVGDDVDLRSIAE--ETELFTGAELEGLCREAGIVALREDI 516
R K+ V L ++ + +L TGA+L LC +A AL+ +
Sbjct: 478 RKFKLEPSVSLVNVLDCCPPQL-TGADLYSLCSDAMTAALKRRV 520
Score = 333 (122.3 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 94/268 (35%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 297 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 354
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 355 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 409
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 410 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 465
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 466 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEE 525
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 526 GLEPGSSALMLTMEDLLQAAARLQPSVS 553
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 592 (213.5 bits), Expect = 6.8e-57, P = 6.8e-57
Identities = 163/479 (34%), Positives = 243/479 (50%)
Query: 53 PRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHA 112
P +LL GPPG+GKT+ V A G HL + S+ G E L+ AFS+A
Sbjct: 452 PGSVLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRC- 510
Query: 113 LSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRV 172
+P V+ + +D L RD E D R+ + L L+ P TS P ++VVA+T+R
Sbjct: 511 ---RPVVLLLTAVDLLGRDRDGLGE-DARVVATLRRLLLDEDPL-TSHPPLMVVATTSRA 565
Query: 173 DAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGAD 232
+ PA ++ F R IL+ T +PL V+L +A C G+V D
Sbjct: 566 QDL-PADVQTA-FPHELEVPVLSEGQRLSILQALTAHLPLGQEVNLAQLARRCAGFVVGD 623
Query: 233 LEALCREATMSA---VKRS------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGV 280
L AL ++ +A +K S S+ +E CA + ED A + + ++ V
Sbjct: 624 LYALLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDLGQALEQLQSAHSQAV 683
Query: 281 TV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
+IP V+W D+GGL+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 684 GAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTL 741
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKR 399
G EL +MYVG+SE +R F RAR AAP IIFFDE D + R
Sbjct: 742 LAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR 801
Query: 400 GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYV- 458
G S + V +R++S LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V
Sbjct: 802 GRSGDSG-GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVG 860
Query: 459 PPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETE-LFTGAELEGLCREAGIVALREDI 516
D ++ +L TR ++ V L ++ + TGA+L LC +A AL+ +
Sbjct: 861 ASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRRV 919
Score = 337 (123.7 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 95/268 (35%), Positives = 141/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 696 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 753
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 754 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 808
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 809 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 864
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS----SD 250
+ +L T+K L+ +V L A+ C + GADL +LC +A +A+KR D
Sbjct: 865 RASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRRVRDLED 924
Query: 251 ANEC-AGVLSVTMEDWRHARSVVGPSIT 277
E + L +TMED A + + PS++
Sbjct: 925 GLEPGSSALLLTMEDLLQAAARLQPSVS 952
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 591 (213.1 bits), Expect = 9.3e-57, P = 9.3e-57
Identities = 159/476 (33%), Positives = 242/476 (50%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ G EK L+ FS+A
Sbjct: 466 VLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRC---- 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+P V+ + +D L RD E D R+ + L L+ P TS P ++VVA+T++ +
Sbjct: 522 RPVVLLLTAVDLLGRNRDGLGE-DARVVATLCHLLQDEDPL-TSCPPLMVVATTSQAQDL 579
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
PA ++ F R +L+ T +PL V+L +A C G+V DL A
Sbjct: 580 -PADVQTA-FPHELEVPVLSEGQRLSVLQALTAHLPLGQEVNLTQLARRCAGFVVGDLYA 637
Query: 236 LCREATMSA---VKRS------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV- 282
L ++ A +K S S+ +E CA + ED+ A + + ++ +
Sbjct: 638 LLTHSSRVACTRIKNSGLAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAIGAP 697
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+IP V+W D+GGL+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG +
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRN 815
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVP-PP 461
+ V +R++S LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V
Sbjct: 816 GDSG-GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSE 874
Query: 462 DLEARHEILRVHTRNMKVGDDVDLRSIAEETE-LFTGAELEGLCREAGIVALREDI 516
D ++ +L TR K+ V L ++ + TGA+L LC +A AL+ +
Sbjct: 875 DRASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRV 930
Score = 330 (121.2 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 93/268 (34%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 707 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 764
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 765 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRNGDSG 819
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 820 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSED 875
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRVRDLEE 935
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TM+D A + + PS++
Sbjct: 936 GLEPGSSTLLLTMDDLLQAAARLQPSVS 963
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 590 (212.7 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 158/478 (33%), Positives = 241/478 (50%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ +S +A+ S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL----CADSSRAVETKLQATFSRARRC 522
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+P+V+ + +D L RD E D R+A+ L L+D + S+ P ++VVA+T+RV
Sbjct: 523 RPAVLLLTAVDLLGRDRDGLGE-DARVAATLRHLLLDEDALSRC--PPLMVVATTSRVQD 579
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+ ++ + F R IL+ T +PL V+L +A C G+V DL
Sbjct: 580 LPTDVQTA--FPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLY 637
Query: 235 AL----CREA--------TMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTV 282
AL CR A + + + + C + ED+ A + + ++ V
Sbjct: 638 ALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHSQAVGA 697
Query: 283 -EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
IP V+W D+GGL+D+KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 698 PRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLA 755
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG
Sbjct: 756 KAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGR 815
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYV-PP 460
S + V +R++S LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V
Sbjct: 816 SGDSG-GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGAS 874
Query: 461 PDLEARHEILRVHTRNMKVGDDVDLRSIAE--ETELFTGAELEGLCREAGIVALREDI 516
D ++ +L TR K+ V L ++ + +L TGA+L LC +A + AL+ +
Sbjct: 875 EDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQL-TGADLYSLCSDAMMTALKRRV 931
Score = 344 (126.2 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 96/268 (35%), Positives = 142/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 708 VGGLQDVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 765
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 766 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 820
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 821 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 876
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+A+V L + C + GADL +LC +A M+A+KR D E
Sbjct: 877 RASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE 936
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 937 GLELRSSALLLTMEDLLQAAARLQPSVS 964
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 593 (213.8 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 164/526 (31%), Positives = 267/526 (50%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKL-----GLKWPRGLLLYGPPG 63
++ N +K +GG + E I+ LL +QKL GL+ G+LL G G
Sbjct: 552 TDRNLPYKRLNHLGGVDKLGTSSFEHISHSLLGRPLSQKLAGIAVGLR-SGGVLLTGGKG 610
Query: 64 TGKTSLVRAVVREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSV 119
+GK++L +A+ +E AH+ VI ++ +G K + EAF +AS +PS+
Sbjct: 611 SGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEASWR----QPSI 666
Query: 120 VFIDEIDALC---PRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+ +D++D + P +H + +S+L + L D K + + ++A++ A+
Sbjct: 667 ILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEVISLGSLIALIATSQSEHAL 726
Query: 176 DPAL-RRSGR--FDXXXXXXXXXXXXRFEIL-KLYTKKVPLD----ANVDLEAIATSCNG 227
P+L G F R E+L + K+ D +++DL+ +A G
Sbjct: 727 HPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNKLNCDVKKFSDLDLQYVAKETEG 786
Query: 228 YVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK- 286
+V D L A + + + G L+++ D++ A P R V++ PK
Sbjct: 787 FVARDFTMLVDRAIHACISNQNAFQH--GELNLSTVDFQKALKDFTPLALRNVSLHKPKD 844
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ W+ IGGL+D+++ L + P K+ F+ L I G LL+G PG
Sbjct: 845 IGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVVAR 904
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G EL S Y+G SE +R+ F RA+ A P I+FFDE D + +RG +T
Sbjct: 905 ESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRG-HDNTG 963
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
+T +R+++ LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D LY PPPD +R
Sbjct: 964 VT--DRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQSSR 1021
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
EIL+ + ++ + +DVDL +A +TE FTGA+L+ L A + A+
Sbjct: 1022 CEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLEAI 1067
Score = 338 (124.0 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 90/246 (36%), Positives = 128/246 (52%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R +S H K + IGG + + L + I P Y L ++ G+LLYG PGTG
Sbjct: 835 RNVSLHKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTG 894
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L V RE G + ++V P + K ++G SE+A+R+ FS+A + KP +VF DE
Sbjct: 895 KTLLAGVVARESGMNFISVKGPELLSK-YIGASEQAVRDIFSRAQA----AKPCIVFFDE 949
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
D++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 950 FDSIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 1005
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EILK + + L +VDLE +A + GADL+AL A +
Sbjct: 1006 RLDKCLYCPPPDQSSRCEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLE 1065
Query: 244 AVKRSS 249
A+ S
Sbjct: 1066 AIHNLS 1071
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 587 (211.7 bits), Expect = 2.6e-56, P = 2.6e-56
Identities = 173/524 (33%), Positives = 258/524 (49%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
SE + W + G A V L ++ P L A G +LL GPPG GKT+
Sbjct: 424 SEESTLWSSLSP-PGLEALVSELCAVLK-PRLQPGGALLTGTS---SVLLRGPPGCGKTT 478
Query: 69 LVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL 128
+V A G HL + S+ G E L+ FS+A +P+V+ + +D L
Sbjct: 479 VVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRC----RPAVLLLTAVDLL 534
Query: 129 CPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
RD E D R+ + L L+ + P S P ++VVA+T+R + PA ++ F
Sbjct: 535 GRDRDGLGE-DARVMAVLRHLLLNEDPLN-SCPPLMVVATTSRAQDL-PADVQTA-FPHE 590
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA---V 245
R IL+ T +PL V+L +A C G+V DL AL ++ +A +
Sbjct: 591 LEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRI 650
Query: 246 KRSS--------DANE-CAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGL 295
K S D E CA + ED+ A + + ++ V +IP V+W D+GGL
Sbjct: 651 KNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGL 710
Query: 296 RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXX 355
+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 711 QEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSV 768
Query: 356 XGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLS 415
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S + V +R++S
Sbjct: 769 KGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSG-GVMDRVVS 827
Query: 416 TLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP-PDLEARHEILRVHT 474
LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V D ++ +L T
Sbjct: 828 QLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAIT 887
Query: 475 RNMKVGDDVDLRSIAE--ETELFTGAELEGLCREAGIVALREDI 516
R K+ V L ++ + +L TGA+L LC +A AL+ +
Sbjct: 888 RKFKLEPSVSLVNVLDCCPPQL-TGADLYSLCSDAMTAALKRRV 930
Score = 333 (122.3 bits), Expect = 6.0e-27, P = 6.0e-27
Identities = 94/268 (35%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 707 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 764
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 765 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 819
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 820 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEE 935
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 936 GLEPGSSALMLTMEDLLQAAARLQPSVS 963
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 582 (209.9 bits), Expect = 9.0e-56, P = 9.0e-56
Identities = 159/476 (33%), Positives = 240/476 (50%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ G E L+ AFS+A
Sbjct: 466 VLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRC---- 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+P V+ + +D L RD E D R+ + L L+ P S P ++VVA+T+R +
Sbjct: 522 RPVVLLLTAVDLLGRDRDGLGE-DARVVATLRHLLLDEDPL-ASCPPLMVVATTSRAQDL 579
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
PA ++ F R +L+ T +PL V+L +A C G+V DL A
Sbjct: 580 -PADVQTA-FPHELEVPVLAEAQRLSVLRALTAHLPLGQEVNLAQLARRCAGFVVGDLFA 637
Query: 236 LCREATMSA---VKRS------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV- 282
L ++ +A +K S S+ +E CA + ED+ A + + ++ +
Sbjct: 638 LLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQAAHSQAIGAP 697
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
IP V+W D+GGL+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 698 RIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPNRGRS 815
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP-P 461
+ V +R++S LL E+DGL + + V+ ATNRP +D AL+RPGRFD +++V
Sbjct: 816 GDSG-GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNE 874
Query: 462 DLEARHEILRVHTRNMKVGDDVDLRSIAEETE-LFTGAELEGLCREAGIVALREDI 516
D ++ +L TR ++ V L + + TGA+L LC +A AL+ +
Sbjct: 875 DRASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRRV 930
Score = 331 (121.6 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 94/268 (35%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 707 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 764
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 765 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPNRGRSGDSG 819
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 820 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNED 875
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 876 RASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRRVRDLEE 935
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 936 GLEPGSSALLLTMEDLLQAAARLQPSVS 963
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 158/487 (32%), Positives = 244/487 (50%)
Query: 45 AQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREA 104
+Q L +LL GP G+GKT VRAV HL + S+ +E+ + A
Sbjct: 155 SQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMA 214
Query: 105 FSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVV 164
F+QA + P V+ + +I+ L RD R +D R+ + L L+ P+++S P V+
Sbjct: 215 FAQAQQY----HPCVLLLKDIEVLGRDRD-RLGEDARVIATLRQLLLDRDPAQSSHP-VL 268
Query: 165 VVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATS 224
V+ +T + + ++ + F R +L + T +PL V L +A
Sbjct: 269 VIGTTCKPQDVPTDVQTA--FLHEVKIEALSEDQRRAMLSMLTASLPLGKEVSLAKLARR 326
Query: 225 CNGYVGADLEALCREATMSAVKR------SSDANE------CAGVLSVTMEDWRHARSVV 272
G+V D AL ++ +A R NE C V ED+ A +
Sbjct: 327 TAGFVLGDFCALLSHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPVLEEDFNVALDQL 386
Query: 273 GPSITRGVTV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ ++ V +IP V+W+D+GGL ++KK++ ++ P++H S LG+ G LL+G
Sbjct: 387 HDAHSQAVGAPKIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLS-LGLCR-SGLLLYG 444
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G EL +MYVG+SE +RN F RAR AAP IIFFDE
Sbjct: 445 PPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIIFFDE 504
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D + RG S + V +R++S LL E+DGL ++ + V+ ATNRP +D AL+RPGR
Sbjct: 505 LDSLAPNRGRSGDSG-GVMDRVVSQLLAELDGLHSSREVFVIGATNRPDLLDPALLRPGR 563
Query: 452 FDLVLYVPP-PDLEARHEILRVHTRNMKVGDDVDLRSIAEETEL-FTGAELEGLCREAGI 509
FD ++YV D E++ ++L TR K+ V+L SI EE TGA++ LC +A +
Sbjct: 564 FDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIYSLCSDAMM 623
Query: 510 VALREDI 516
A++ +
Sbjct: 624 CAVKRKV 630
Score = 339 (124.4 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 94/268 (35%), Positives = 141/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + I PL + + LGL GLLLYGPPGTGKT L +AV C
Sbjct: 407 VGGLHEVKKEILDTIQLPLEHP-ELLSLGL-CRSGLLLYGPPGTGKTLLAKAVATTCTMT 464
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +R F++A + A P ++F DE+D+L P R +
Sbjct: 465 FLSVKGPELINM-YVGQSEENVRNVFARARAAA----PCIIFFDELDSLAPNRGRSGDSG 519
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S+ V V+ +TNR D +DPAL R GRFD
Sbjct: 520 GVMDRVVSQLLAELDGLHSSR----EVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNED 575
Query: 197 X-XRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRSSDANEC 254
+ ++L T+K LD +V+L +I C + GAD+ +LC +A M AVKR + E
Sbjct: 576 RESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEE 635
Query: 255 -----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED+ A + + PS++
Sbjct: 636 GLDTESSALILTMEDFLQAAARLQPSVS 663
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 167/527 (31%), Positives = 265/527 (50%)
Query: 51 KWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASS 110
++P L+ GP GK+ L+ +R + I+ V +++ GE+E+ LR F A +
Sbjct: 218 RFPTTALVVGPVDCGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQT 277
Query: 111 -----------HALSGK-----------PSVVFIDEIDALCPRR---DHRREQD-VRIAS 144
H++ P V+ I++++ LCP D + + +RI++
Sbjct: 278 FKEKLRPLCNFHSVCFTFEILISFIFIVPIVILIEDLELLCPSTAVADAKNSSNSLRISA 337
Query: 145 QLFTLMDSNKPSKTSVPHVVVVASTNRV-DAIDPALRRSGRFDXXXXXXXXXXXXRFEIL 203
+L+ L+D+ +P ++ +T+ V D++ RR RF R +++
Sbjct: 338 ELYKLLDA-------LPRGIICLATSGVPDSLHEHARR--RFVREVTINMPSEGQRRQLV 388
Query: 204 KLYTKKVPLDANVDL-EAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTM 262
+ + L+ + L E IA + GYV ADL L R + + E + S++
Sbjct: 389 EHLCEVHELNISQTLLEHIARNTQGYVIADLTLLLRRVQQQLLTKDDFDIEHIFLKSLSQ 448
Query: 263 EDWRHARSVVGPSITRGVTVEIPKVT--WEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLG 320
PS +R V + K+T +E IGG+ LK+ LQ +V I+ S AF+R G
Sbjct: 449 TQ---------PSASRSTDVRVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFG 499
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+S +G LL+GPPGC AE+YS YVG +E + F AR
Sbjct: 500 LSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTAR 559
Query: 381 LAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKGILVLAAT 436
AP +IF DE D +VG + S V R+LSTLLTEM+G+ + ILV+AAT
Sbjct: 560 KNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAAT 619
Query: 437 NRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFT 496
NRP ID AL+RPGRFD +++VP PD ++R +L++H++ M ++V L+ IA T+ ++
Sbjct: 620 NRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFHENVFLQEIAARTDRYS 679
Query: 497 GAELEGLCREAGIVALREDISATAVRNRHFQTVKDSLKPALTKEEID 543
GA+L LC EA I A + D AT + + F+ V K +LT+ +ID
Sbjct: 680 GADLCNLCNEAAIEAFQRDFKATEIELQDFEKVLTKQKSSLTQSQID 726
Score = 333 (122.3 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 85/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG A L+ + + S+ + GL P+G+LLYGPPG KT++ + + +E
Sbjct: 469 EVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEAD 528
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-- 136
S V+ +VG +E+ + F A +A P ++F+DEID+L RR
Sbjct: 529 MTFIATSAAEVYSPYVGCAERFISRIFDTARKNA----PCLIFLDEIDSLVGRRTVSSGG 584
Query: 137 ---EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
+ +RI S L T M+ S H++VVA+TNR D ID AL R GRFD
Sbjct: 585 GGGQVQLRILSTLLTEMNGIVGGG-SQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPA 643
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R +LKL+++++P NV L+ IA + Y GADL LC EA + A +R A E
Sbjct: 644 PDEKSRLALLKLHSQRMPFHENVFLQEIAARTDRYSGADLCNLCNEAAIEAFQRDFKATE 703
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 582 (209.9 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 170/520 (32%), Positives = 270/520 (51%)
Query: 20 AIGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAV 73
++GG + +V A+ E IT LL S Q L GL+ LL+ G G+GK++L +A+
Sbjct: 555 SLGGVSSLSVSAM-EHITHSLLGRPLSRQLMALVAGLR-NGALLITGGKGSGKSTLAKAI 612
Query: 74 VREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+E AH+ ++ ++ + +KAL AFS+A+ +PSV+ +D++D +
Sbjct: 613 CKEAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSEAAWR----QPSVILLDDLDLIA 668
Query: 130 -----PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RR 181
P +H E Q R+A L ++ S S+ V ++A++ ++ P+L
Sbjct: 669 GLPSTPEHEHSPEAVQSQRLAHALNNMI-KEFVSMGSL--VALIATSQLQHSLHPSLVSA 725
Query: 182 SG--RFDXXXXXXXXXXXXRFEILKLYTK-KVPLDAN----VDLEAIATSCNGYVGADLE 234
G F R EIL K K+ D + +DL+ IA +V D
Sbjct: 726 QGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFVARDFT 785
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIG 293
L A S++ R + G L++T D++ A P+ R V + P+ + W+ IG
Sbjct: 786 VLVDRAIHSSLSRQQNPTR-EG-LTLTTADFQKALRGFLPASLRNVNLHKPRDLGWDKIG 843
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 844 GLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFI 903
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 904 SIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 960
Query: 414 LSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVH 473
++ LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V
Sbjct: 961 VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVL 1020
Query: 474 TRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
++++ + DDVDL+ +A TE FTGA+L+ L A + AL+
Sbjct: 1021 SKSLPLADDVDLQHVASVTESFTGADLKALLYNAQLEALQ 1060
Score = 336 (123.3 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 84/243 (34%), Positives = 130/243 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 827 RNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 886
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L V RE G + +++ P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 887 KTLLAGVVARESGMNFISIQGPELLSK-YIGASEQAVRDVFIRAQA----AKPCILFFDE 941
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 942 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 997
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + +K +PL +VDL+ +A+ + GADL+AL A +
Sbjct: 998 RLDKCVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHVASVTESFTGADLKALLYNAQLE 1057
Query: 244 AVK 246
A++
Sbjct: 1058 ALQ 1060
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 478 (173.3 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 101/300 (33%), Positives = 166/300 (55%)
Query: 227 GYVGADLEALCREATMSAV----KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTV 282
G++ DL LCR ++ V + + NE + ++ + ++ A + PS V
Sbjct: 419 GFLFKDLTKLCRTVSLLTVSSFEEEEEEENENEKEIKISFKIFKEALKFIKPSTLINFDV 478
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+ V W+ IGG + +K++ +Q +EWP+K+ F RL ++ G LLHGP GC
Sbjct: 479 TVQNVKWDRIGGYKQVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVK 538
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRG-G 401
G+++YS ++GESE ++R+ F+ ARL++P I+FFDE D + RG G
Sbjct: 539 AIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSARLSSPCIMFFDEIDSLTLSRGSG 598
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPP 461
+ +R+LS LL EMDG++ I ++ TN +ID+AL+RPGRF+ ++++ P
Sbjct: 599 DDNEDGGTSKRILSQLLNEMDGIQVKSQIFLIGCTNSIQSIDSALLRPGRFESLIHIDLP 658
Query: 462 DLEARHEILRV-HTRNMKVG-DDVDLR---SIAEETELFTGAELEGLCREAGIVALREDI 516
L+ R +IL V T ++ D++ + IA +T FTG++L LC +AGI+ L DI
Sbjct: 659 SLDDRLDILNVLSTNSLNFNKDEITQQVWLDIATQTSGFTGSQLYDLCNQAGIIQLETDI 718
Score = 269 (99.8 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 78/240 (32%), Positives = 116/240 (48%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW + IGG + E R+LI +PL Y ++L L GLLL+GP G GK+ +V+
Sbjct: 482 NVKW---DRIGGYKQVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVK 538
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ E + I ++ +GESE+ +R+ F A LS P ++F DEID+L
Sbjct: 539 AIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSAR---LSS-PCIMFFDEIDSLTLS 594
Query: 132 R---DHRREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D + RI SQL MD + + ++ TN + +ID AL R GRF+
Sbjct: 595 RGSGDDNEDGGTSKRILSQLLNEMDGIQVKS----QIFLIGCTNSIQSIDSALLRPGRFE 650
Query: 187 XXXXXXXXXXXXRFEILKLYT------KKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
R +IL + + K + V L+ IAT +G+ G+ L LC +A
Sbjct: 651 SLIHIDLPSLDDRLDILNVLSTNSLNFNKDEITQQVWLD-IATQTSGFTGSQLYDLCNQA 709
Score = 72 (30.4 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 22/105 (20%), Positives = 46/105 (43%)
Query: 114 SGKPSVVFIDEIDALCPR-RDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRV 172
S +P + ++ +D++ + D+ ++ +L +D K ++ +++++ V
Sbjct: 294 SKEPMIYILNNLDSIVGKISDNENSYQKKVIQRLTNFIDHIKSNE------IILSTCTSV 347
Query: 173 DAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL--DAN 215
+ ID ++ R+GR D R IL K PL D N
Sbjct: 348 ENIDQSITRAGRIDKFIHLTIPTQSKRMLILSNLLKNTPLQYDTN 392
Score = 54 (24.1 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 41 YSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRE 76
YS+Q L K G+L+ GP GT K L+ + ++
Sbjct: 236 YSNQLNFLKSK---GILIDGPEGTSKLQLIEYIAQQ 268
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 571 (206.1 bits), Expect = 3.5e-54, P = 3.5e-54
Identities = 165/515 (32%), Positives = 262/515 (50%)
Query: 20 AIGGNRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAVV 74
++GG A + E IT LL S Q L GL+ LL+ G G+GK++ +A+
Sbjct: 556 SLGGVSALGASAMEHITHSLLGRPLSRQLMALVAGLR-NGALLITGGKGSGKSTFAKAIC 614
Query: 75 RECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC----- 129
+E L KA G+ +++++A A S A +PSV+ +D++D +
Sbjct: 615 KEAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLIAGLPSV 674
Query: 130 PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSG--R 184
P ++H E Q R+A L D K ++ V ++A++ ++ P+L G
Sbjct: 675 PEQEHSPEAVQSQRLAH---ALNDMIKEFVSTGSLVALIATSQLQQSLHPSLVSAQGIHT 731
Query: 185 FDXXXXXXXXXXXXRFEILKLYTK-KVPLDAN----VDLEAIATSCNGYVGADLEALCRE 239
F R EIL K K+ D + +DL+ IA +V D L
Sbjct: 732 FQCVQHLQPPNPEQRCEILHSVVKNKLGCDISNFPDLDLQCIAKDTEAFVARDFTVLVDR 791
Query: 240 ATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLRDL 298
A S++ R ++ L++T D++ A P+ R V + P+ + W+ IGGL ++
Sbjct: 792 AIHSSLSRQHSSSR--EDLTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEV 849
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
++ L ++ P K+ F+ L I G LL+GPPG G
Sbjct: 850 RQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGP 909
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+++ LL
Sbjct: 910 ELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVVNQLL 966
Query: 419 TEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMK 478
T++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V ++++
Sbjct: 967 TQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLA 1026
Query: 479 VGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ DDVDL+ +A T+ FTGA+L+ L A + AL+
Sbjct: 1027 LADDVDLQHVASVTDSFTGADLKALLYNAQLEALQ 1061
Score = 329 (120.9 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 83/243 (34%), Positives = 130/243 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 828 RNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 887
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L V RE G + +++ P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 888 KTLLAGVVARESGMNFISIKGPELLSK-YIGASEQAVRDVFIRAQA----AKPCILFFDE 942
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 943 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 998
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + +K + L +VDL+ +A+ + + GADL+AL A +
Sbjct: 999 RLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLE 1058
Query: 244 AVK 246
A++
Sbjct: 1059 ALQ 1061
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 567 (204.7 bits), Expect = 3.5e-54, P = 3.5e-54
Identities = 169/516 (32%), Positives = 262/516 (50%)
Query: 20 AIGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAV 73
++GG N V +L E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 233 SLGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAI 290
Query: 74 VREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+E AH+ + ++ + +K L AFS+A + +PSVV +D++D +
Sbjct: 291 CKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEA----VWMQPSVVLLDDLDLIA 346
Query: 130 --PR-RDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSGR 184
P +H D + +L L D K + V ++A++ ++ P L G
Sbjct: 347 GLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGV 406
Query: 185 --FDXXXXXXXXXXXXRFEIL-KLYTKKVPLDAN----VDLEAIATSCNGYVGADLEALC 237
F R EIL + K+ D N +DL+ +A G+V D L
Sbjct: 407 HIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 466
Query: 238 REATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLR 296
A S + R S + VL+ T++ + R + P+ R V + P+ + W+ IGGL
Sbjct: 467 DRAIHSRLSRQSISTREKLVLT-TLDFQKALRGFL-PASLRSVNLHKPRDLGWDKIGGLH 524
Query: 297 DLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXX 356
++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 525 EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVK 584
Query: 357 GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLST 416
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+++
Sbjct: 585 GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVVNQ 641
Query: 417 LLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRN 476
LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V + +
Sbjct: 642 LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDS 701
Query: 477 MKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + DDVDL+ +A T+ FTGA+L+ L A + AL
Sbjct: 702 LPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 737
Score = 323 (118.8 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 82/242 (33%), Positives = 128/242 (52%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 505 RSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 564
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 565 KTLLAGVIARESRMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 619
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 620 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 675
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 676 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLE 735
Query: 244 AV 245
A+
Sbjct: 736 AL 737
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 395 (144.1 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 79/212 (37%), Positives = 121/212 (57%)
Query: 268 ARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
A V PS + + ++IPK ++DIGG + +K+ + + + +P K+ + + I +G
Sbjct: 813 ALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGI 872
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSII 387
LL+GPPGC G E++S YVGESE +RN F++AR P +I
Sbjct: 873 LLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVI 932
Query: 388 FFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALM 447
FFDE D + R + + V R+L LL E+DG++ +++LAATNRP ID ALM
Sbjct: 933 FFDEIDSIAVNRNNNQNF---VSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALM 989
Query: 448 RPGRFDLVLYVPPPDLEARHEILRVHTRNMKV 479
RPGRFD ++YVP P+ +R IL+ + + K+
Sbjct: 990 RPGRFDRIIYVPLPNYSSRFAILKKNLKFFKI 1021
Score = 271 (100.5 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 63/185 (34%), Positives = 95/185 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + E + +P Y + K ++ P+G+LLYGPPG KT +A+ E +
Sbjct: 837 IGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMN 896
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QD 139
+ + +VGESEK++R F +A + P V+F DEID++ R++ +
Sbjct: 897 FISVKGPEIFSKYVGESEKSIRNIFKKAREN----HPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ QL +D K +V+++A+TNR D IDPAL R GRFD R
Sbjct: 953 NRVLCQLLNEIDGIKNRL----NVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR 1008
Query: 200 FEILK 204
F ILK
Sbjct: 1009 FAILK 1013
Score = 140 (54.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 43/152 (28%), Positives = 79/152 (51%)
Query: 385 SIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDA 444
+IIF DE +++ KR +++ +I S LL MDG+++ +++ ATN + ID
Sbjct: 557 TIIFIDEIEILCKKREENNNMNIYT-----SVLLNNMDGIKKHTHTILIGATNYINKIDL 611
Query: 445 ALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMK--VGDDVDLRSIAEETELFTGAELEG 502
AL R GRFD + V P+L+ R I + +K +G + +A+ + FT +++
Sbjct: 612 ALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKK-KIHKLADLCQSFTCSDINS 670
Query: 503 LCREAGIVALRED--ISATAVRNRHFQTVKDS 532
L + + L+E+ IS + + T+ D+
Sbjct: 671 LINISMFLNLKENKIISRDIFKTANVHTIDDT 702
Score = 136 (52.9 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
K +++FIDEI+ LC +R+ ++ S L MD K H +++ +TN ++ I
Sbjct: 555 KCTIIFIDEIEILCKKREENNNMNI-YTSVLLNNMDGIKKHT----HTILIGATNYINKI 609
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL-DANVD---LEAIATSCNGYVGA 231
D ALRRSGRFD R I + KK+ L N+ + +A C + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISI---FQKKLNLIKHNIGKKKIHKLADLCQSFTCS 666
Query: 232 DLEAL 236
D+ +L
Sbjct: 667 DINSL 671
Score = 84 (34.6 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
+++ EK K +GG E + I PL+Y + +G+LL+GPPG G
Sbjct: 412 KMVVNKKEK-KGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCG 470
Query: 66 KTSLVRAVVRE 76
KT + + E
Sbjct: 471 KTYIALLIKEE 481
Score = 76 (31.8 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 488 IAEETELFTGAELEGLCREAGIVALREDISATAVR 522
+A++T+ ++GAE+ +CREA I ALR+ + ++
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIK 1147
Score = 52 (23.4 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 221 IATSCNGYVGADLEALCREATMSAVKRS 248
+A Y GA++ +CREA++ A++++
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQT 1140
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 395 (144.1 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 79/212 (37%), Positives = 121/212 (57%)
Query: 268 ARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
A V PS + + ++IPK ++DIGG + +K+ + + + +P K+ + + I +G
Sbjct: 813 ALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGI 872
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSII 387
LL+GPPGC G E++S YVGESE +RN F++AR P +I
Sbjct: 873 LLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVI 932
Query: 388 FFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALM 447
FFDE D + R + + V R+L LL E+DG++ +++LAATNRP ID ALM
Sbjct: 933 FFDEIDSIAVNRNNNQNF---VSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALM 989
Query: 448 RPGRFDLVLYVPPPDLEARHEILRVHTRNMKV 479
RPGRFD ++YVP P+ +R IL+ + + K+
Sbjct: 990 RPGRFDRIIYVPLPNYSSRFAILKKNLKFFKI 1021
Score = 271 (100.5 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 63/185 (34%), Positives = 95/185 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + E + +P Y + K ++ P+G+LLYGPPG KT +A+ E +
Sbjct: 837 IGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMN 896
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QD 139
+ + +VGESEK++R F +A + P V+F DEID++ R++ +
Sbjct: 897 FISVKGPEIFSKYVGESEKSIRNIFKKAREN----HPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ QL +D K +V+++A+TNR D IDPAL R GRFD R
Sbjct: 953 NRVLCQLLNEIDGIKNRL----NVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR 1008
Query: 200 FEILK 204
F ILK
Sbjct: 1009 FAILK 1013
Score = 140 (54.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 43/152 (28%), Positives = 79/152 (51%)
Query: 385 SIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDA 444
+IIF DE +++ KR +++ +I S LL MDG+++ +++ ATN + ID
Sbjct: 557 TIIFIDEIEILCKKREENNNMNIYT-----SVLLNNMDGIKKHTHTILIGATNYINKIDL 611
Query: 445 ALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMK--VGDDVDLRSIAEETELFTGAELEG 502
AL R GRFD + V P+L+ R I + +K +G + +A+ + FT +++
Sbjct: 612 ALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKK-KIHKLADLCQSFTCSDINS 670
Query: 503 LCREAGIVALRED--ISATAVRNRHFQTVKDS 532
L + + L+E+ IS + + T+ D+
Sbjct: 671 LINISMFLNLKENKIISRDIFKTANVHTIDDT 702
Score = 136 (52.9 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
K +++FIDEI+ LC +R+ ++ S L MD K H +++ +TN ++ I
Sbjct: 555 KCTIIFIDEIEILCKKREENNNMNI-YTSVLLNNMDGIKKHT----HTILIGATNYINKI 609
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL-DANVD---LEAIATSCNGYVGA 231
D ALRRSGRFD R I + KK+ L N+ + +A C + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISI---FQKKLNLIKHNIGKKKIHKLADLCQSFTCS 666
Query: 232 DLEAL 236
D+ +L
Sbjct: 667 DINSL 671
Score = 84 (34.6 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
+++ EK K +GG E + I PL+Y + +G+LL+GPPG G
Sbjct: 412 KMVVNKKEK-KGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCG 470
Query: 66 KTSLVRAVVRE 76
KT + + E
Sbjct: 471 KTYIALLIKEE 481
Score = 76 (31.8 bits), Expect = 3.9e-54, Sum P(4) = 3.9e-54
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 488 IAEETELFTGAELEGLCREAGIVALREDISATAVR 522
+A++T+ ++GAE+ +CREA I ALR+ + ++
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIK 1147
Score = 52 (23.4 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 221 IATSCNGYVGADLEALCREATMSAVKRS 248
+A Y GA++ +CREA++ A++++
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQT 1140
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 567 (204.7 bits), Expect = 9.4e-54, P = 9.4e-54
Identities = 169/516 (32%), Positives = 262/516 (50%)
Query: 20 AIGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAV 73
++GG N V +L E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 555 SLGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAI 612
Query: 74 VREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+E AH+ + ++ + +K L AFS+A + +PSVV +D++D +
Sbjct: 613 CKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEA----VWMQPSVVLLDDLDLIA 668
Query: 130 --PR-RDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSGR 184
P +H D + +L L D K + V ++A++ ++ P L G
Sbjct: 669 GLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGV 728
Query: 185 --FDXXXXXXXXXXXXRFEIL-KLYTKKVPLDAN----VDLEAIATSCNGYVGADLEALC 237
F R EIL + K+ D N +DL+ +A G+V D L
Sbjct: 729 HIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 788
Query: 238 REATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLR 296
A S + R S + VL+ T++ + R + P+ R V + P+ + W+ IGGL
Sbjct: 789 DRAIHSRLSRQSISTREKLVLT-TLDFQKALRGFL-PASLRSVNLHKPRDLGWDKIGGLH 846
Query: 297 DLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXX 356
++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 847 EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVK 906
Query: 357 GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLST 416
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+++
Sbjct: 907 GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVVNQ 963
Query: 417 LLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRN 476
LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V + +
Sbjct: 964 LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDS 1023
Query: 477 MKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ + DDVDL+ +A T+ FTGA+L+ L A + AL
Sbjct: 1024 LPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 1059
Score = 323 (118.8 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 82/242 (33%), Positives = 128/242 (52%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 827 RSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 886
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 887 KTLLAGVIARESRMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 941
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 942 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 997
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 998 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLE 1057
Query: 244 AV 245
A+
Sbjct: 1058 AL 1059
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 561 (202.5 bits), Expect = 2.6e-53, P = 2.6e-53
Identities = 152/479 (31%), Positives = 234/479 (48%)
Query: 55 GLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKAL-REAFSQASSHAL 113
G L+YG G+GKT L++ V ++ + + + E+ + L + F +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 114 SGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSN--KPSKTSVPHVVVVASTNR 171
KPSV+ +D ID L D ++QL SN K ++ ++ S N
Sbjct: 553 WNKPSVLILDNIDKLMSVE--MENMDATKSNQLTEFFISNLTKIHHQLNSNLSILLSANS 610
Query: 172 VDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLY-TKKVPLDANVDLEAIATSCNGYVG 230
D I+ L S + RFEIL Y T K+ L VDL + + GY+
Sbjct: 611 KDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLP 670
Query: 231 ADLEALC----REATMSAVKRSSDAN-ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIP 285
DL+ L E ++ + ++ E +VT E A + PS RGV ++
Sbjct: 671 NDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTPSNLRGVKLQKS 730
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+ W DIGGL++ K L + +EWP K++ F+ + G LL+G PGC
Sbjct: 731 SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ + Y+G SE +R F+RA+ A P I+FFDE D + KRG ST
Sbjct: 791 GQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG-HDST 849
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
+T +R+++ +LT+MDG E G+ VLAAT+RP ID+AL+RPGR D + P+ E
Sbjct: 850 GVT--DRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYED 907
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
R +IL+ T M + DDV+L IAE+T F+GA+++GL A + A+ + + R +
Sbjct: 908 RLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQREQ 966
Score = 311 (114.5 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 78/227 (34%), Positives = 121/227 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + A L E + +P Y+ L+ G+LLYG PG GKT L A+ +CG +
Sbjct: 737 IGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLN 796
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
+++ P ++K ++G SE+++RE F +A + KP ++F DE D++ P+R H
Sbjct: 797 FISIKGPEILNK-YIGASEQSVRELFERAQA----AKPCILFFDEFDSIAPKRGHDSTGV 851
Query: 140 V-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T MD + + V V+A+T+R D ID AL R GR D
Sbjct: 852 TDRVVNQMLTQMDGAE----GLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYED 907
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ T K+ L +V+L IA G+ GAD++ L A + AV
Sbjct: 908 RLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV 954
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 561 (202.5 bits), Expect = 2.6e-53, P = 2.6e-53
Identities = 152/479 (31%), Positives = 234/479 (48%)
Query: 55 GLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKAL-REAFSQASSHAL 113
G L+YG G+GKT L++ V ++ + + + E+ + L + F +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 114 SGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSN--KPSKTSVPHVVVVASTNR 171
KPSV+ +D ID L D ++QL SN K ++ ++ S N
Sbjct: 553 WNKPSVLILDNIDKLMSVE--MENMDATKSNQLTEFFISNLTKIHHQLNSNLSILLSANS 610
Query: 172 VDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLY-TKKVPLDANVDLEAIATSCNGYVG 230
D I+ L S + RFEIL Y T K+ L VDL + + GY+
Sbjct: 611 KDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLP 670
Query: 231 ADLEALC----REATMSAVKRSSDAN-ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIP 285
DL+ L E ++ + ++ E +VT E A + PS RGV ++
Sbjct: 671 NDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTPSNLRGVKLQKS 730
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+ W DIGGL++ K L + +EWP K++ F+ + G LL+G PGC
Sbjct: 731 SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ + Y+G SE +R F+RA+ A P I+FFDE D + KRG ST
Sbjct: 791 GQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG-HDST 849
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
+T +R+++ +LT+MDG E G+ VLAAT+RP ID+AL+RPGR D + P+ E
Sbjct: 850 GVT--DRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYED 907
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
R +IL+ T M + DDV+L IAE+T F+GA+++GL A + A+ + + R +
Sbjct: 908 RLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQREQ 966
Score = 311 (114.5 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 78/227 (34%), Positives = 121/227 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + A L E + +P Y+ L+ G+LLYG PG GKT L A+ +CG +
Sbjct: 737 IGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLN 796
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
+++ P ++K ++G SE+++RE F +A + KP ++F DE D++ P+R H
Sbjct: 797 FISIKGPEILNK-YIGASEQSVRELFERAQA----AKPCILFFDEFDSIAPKRGHDSTGV 851
Query: 140 V-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T MD + + V V+A+T+R D ID AL R GR D
Sbjct: 852 TDRVVNQMLTQMDGAE----GLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYED 907
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ T K+ L +V+L IA G+ GAD++ L A + AV
Sbjct: 908 RLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV 954
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 562 (202.9 bits), Expect = 3.2e-53, P = 3.2e-53
Identities = 172/519 (33%), Positives = 263/519 (50%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAVV 74
+GG N V ++ E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 559 LGGVNSIGVSSM-EHITHSLLGRPLSRQLMSLMAGLR-NGALLLTGGKGSGKSTLAKAIC 616
Query: 75 REC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC- 129
+E AH+ ++ ++ + +K + AFS+AS +PSVV +D++D +
Sbjct: 617 KEAFDVLDAHVEIVDCKALRGKRLENLQKTIVAAFSEASWR----QPSVVLLDDLDLVAG 672
Query: 130 ----PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRS 182
P +H E Q R+A L D K + V ++A++ ++ P L
Sbjct: 673 LPALPEHEHSPEAVQSQRLAH---ALNDMTKELISMGSLVALIATSQSQHSLHPLLVSAQ 729
Query: 183 G--RFDXXXXXXXXXXXXRFEILKLYTK-KVPLDAN----VDLEAIATSCNGYVGADLEA 235
G F R EIL K K+ D N +DL+ IA G+V D
Sbjct: 730 GIHLFQCVQHIQPPDQEQRCEILHNAIKNKLDCDMNSFTDLDLKRIAKETEGFVARDFIV 789
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGG 294
L A S + S + VL+ T+ D++ A P+ R V + P+ + W+ IGG
Sbjct: 790 LVDRAIHSRLSNQSVSTREELVLT-TL-DFQKALQGFVPASLRNVNLHKPRDLGWDHIGG 847
Query: 295 LRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXX 354
LR++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 848 LREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMILLV 907
Query: 355 XX-GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 908 LRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 964
Query: 414 LSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVH 473
++ LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V
Sbjct: 965 VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVL 1024
Query: 474 TRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ ++ + +DVDL+ +A T+ FTGA+L+ L A + AL
Sbjct: 1025 SASLPLAEDVDLQHVASLTDSFTGADLKALLYNAQLEAL 1063
Score = 334 (122.6 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 86/243 (35%), Positives = 129/243 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG R + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 830 RNVNLHKPRDLGWDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTG 889
Query: 66 KTSLVRAVVRECGAHLTVI--SPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFID 123
KT L V RE G L V+ P + K ++G SE+A+R+ F +A + KP ++F D
Sbjct: 890 KTLLAGVVARESGMILLVLRYGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFD 944
Query: 124 EIDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRS 182
E +++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R
Sbjct: 945 EFESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRP 1000
Query: 183 GRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATM 242
GR D R EIL + + +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 1001 GRLDKCVYCPPPDQVSRLEILNVLSASLPLAEDVDLQHVASLTDSFTGADLKALLYNAQL 1060
Query: 243 SAV 245
A+
Sbjct: 1061 EAL 1063
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 561 (202.5 bits), Expect = 4.0e-53, P = 4.0e-53
Identities = 171/519 (32%), Positives = 261/519 (50%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKLGLKWPRGLLLY-GPPGTGKTSLVRAVVR 75
+GG N V +L E IT LL S Q L G LL+ G G+GK++L +A+ +
Sbjct: 540 LGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLRNGALLFTGGKGSGKSTLAKAICK 598
Query: 76 ECG----AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL--- 128
E AH+ V+ ++ + +K + AFS+A+ +PSV+ +D++D +
Sbjct: 599 EASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWR----QPSVILLDDLDLIVGV 654
Query: 129 --CPRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSG 183
P +H E Q R+A L +M S S+ V V+A++ ++ P L G
Sbjct: 655 PAAPEHEHGPEAVQSQRLAHALSDMM-KEFISMGSL--VAVIATSQSQHSLHPWLVSAQG 711
Query: 184 R--FDXXXXXXXXXXXXRFEILKLYTK-KVPLD----ANVDLEAIATSCNGYVGADLEAL 236
F R EIL K K+ D N+DL+ IA G+V D L
Sbjct: 712 IHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVL 771
Query: 237 CREATMSAV--KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIG 293
A S + +R + E L +T D++ A P+ R V + P+ + W+ IG
Sbjct: 772 VDRAIHSHLSHQRITTREE----LVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIG 827
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 828 GLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFI 887
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 888 SVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 944
Query: 414 LSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVH 473
++ LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V
Sbjct: 945 VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVL 1004
Query: 474 TRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ ++ + DDVDL+ +A T FTGA+L+ L A + A+
Sbjct: 1005 SDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLEAV 1043
Score = 335 (123.0 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 85/242 (35%), Positives = 129/242 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 811 RNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTG 870
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE G + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 871 KTLLAGVIARESGMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 925
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 926 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 981
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ N + GADL+AL A +
Sbjct: 982 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLE 1041
Query: 244 AV 245
AV
Sbjct: 1042 AV 1043
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 561 (202.5 bits), Expect = 4.1e-53, P = 4.1e-53
Identities = 174/518 (33%), Positives = 261/518 (50%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAVV 74
+GG N V ++ E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 555 LGGVNSLGVSSM-EHITHSLLGRPLSRQLVSLVAGLR-NGALLLTGGKGSGKSTLAKAIC 612
Query: 75 REC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC- 129
+E AH+ +I ++ + +K L AFS+A L +PSVV +D++D +
Sbjct: 613 KEAFDILDAHVEIIDCKALRGKRLENIQKTLAAAFSEA----LWRQPSVVLLDDLDLVVG 668
Query: 130 ----PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRS 182
P +H E Q R+A L L+ S S+ V ++A++ ++ P L
Sbjct: 669 RSALPEHEHSPEAIQSQRLAHALNDLV-KEFISMGSL--VALIATSQSQHSLHPLLVSAQ 725
Query: 183 GR--FDXXXXXXXXXXXXRFEILKLYTK-KVPLD----ANVDLEAIATSCNGYVGADLEA 235
G F R EIL K K+ D +DL+ IA G+V D
Sbjct: 726 GIHIFQCVQHIQPPDQDQRCEILHAIIKNKLDCDMKRFTGLDLQRIAKETEGFVARDFTM 785
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGG 294
L A S + + VL+ T+ D++ A P R V + P+ + W+ IGG
Sbjct: 786 LVDRAIHSHLSHQNVYTREELVLT-TL-DFQKALRGFTPVSLRNVNLHKPRDLGWDRIGG 843
Query: 295 LRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXX 354
L D+++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 844 LHDVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFIS 903
Query: 355 XXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLL 414
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R++
Sbjct: 904 VKGPELLSKYIGASEQAVRDVFVRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVV 960
Query: 415 STLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHT 474
+ LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V +
Sbjct: 961 NQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQASRLEILNVLS 1020
Query: 475 RNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
++ + DDVDL+ +A T+ FTGA+L+ L A + AL
Sbjct: 1021 ESLPLADDVDLQHVASLTDSFTGADLKALLYGAQLEAL 1058
Score = 328 (120.5 bits), Expect = 3.5e-26, P = 3.5e-26
Identities = 83/242 (34%), Positives = 130/242 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 826 RNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTG 885
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE G + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 886 KTLLAGVIARESGMNFISVKGPELLSK-YIGASEQAVRDVFVRAQA----AKPCILFFDE 940
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 941 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 996
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + ++ +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 997 RLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVASLTDSFTGADLKALLYGAQLE 1056
Query: 244 AV 245
A+
Sbjct: 1057 AL 1058
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 561 (202.5 bits), Expect = 5.2e-53, P = 5.2e-53
Identities = 171/519 (32%), Positives = 261/519 (50%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKLGLKWPRGLLLY-GPPGTGKTSLVRAVVR 75
+GG N V +L E IT LL S Q L G LL+ G G+GK++L +A+ +
Sbjct: 689 LGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLRNGALLFTGGKGSGKSTLAKAICK 747
Query: 76 ECG----AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL--- 128
E AH+ V+ ++ + +K + AFS+A+ +PSV+ +D++D +
Sbjct: 748 EASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWR----QPSVILLDDLDLIVGV 803
Query: 129 --CPRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSG 183
P +H E Q R+A L +M S S+ V V+A++ ++ P L G
Sbjct: 804 PAAPEHEHGPEAVQSQRLAHALSDMM-KEFISMGSL--VAVIATSQSQHSLHPWLVSAQG 860
Query: 184 R--FDXXXXXXXXXXXXRFEILKLYTK-KVPLD----ANVDLEAIATSCNGYVGADLEAL 236
F R EIL K K+ D N+DL+ IA G+V D L
Sbjct: 861 IHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVL 920
Query: 237 CREATMSAV--KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIG 293
A S + +R + E L +T D++ A P+ R V + P+ + W+ IG
Sbjct: 921 VDRAIHSHLSHQRITTREE----LVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIG 976
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 977 GLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFI 1036
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 1037 SVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 1093
Query: 414 LSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVH 473
++ LLT++DG+E +G+ VLAAT+RP ID AL+RPGR D +Y PPPD +R EIL V
Sbjct: 1094 VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVL 1153
Query: 474 TRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+ ++ + DDVDL+ +A T FTGA+L+ L A + A+
Sbjct: 1154 SDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLEAV 1192
Score = 335 (123.0 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 85/242 (35%), Positives = 129/242 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 960 RNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTG 1019
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE G + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 1020 KTLLAGVIARESGMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 1074
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 1075 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 1130
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ N + GADL+AL A +
Sbjct: 1131 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLE 1190
Query: 244 AV 245
AV
Sbjct: 1191 AV 1192
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 554 (200.1 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 167/516 (32%), Positives = 248/516 (48%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGL-----LLYGPPGTGKTSLVRAVV 74
++GG + + I+ LL S +++L + RGL L+ G G+GK+SL RA+
Sbjct: 519 SLGGVEDISRSAFQHISHALLGGSLSREL-ISTGRGLRGGALLITGAKGSGKSSLSRALC 577
Query: 75 RECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID-----ALC 129
R+ L K G+ +R+ A+ +PSVV +D++D A
Sbjct: 578 RKASEDLDAHIQLLDCKTLKGKRTDTIRQRLEDVFEQAVWRQPSVVLLDDLDHVAGAATS 637
Query: 130 PRRDHRREQDVR--IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL---RRSGR 184
P +H E +R I+ L L+D ++S+ ++V A T A+ P L + S
Sbjct: 638 PEHEHGPEAVLRQHISQSLKDLVDEIV-LRSSLIALIVTAQTEH--ALHPTLTVVQGSHF 694
Query: 185 FDXXXXXXXXXXXXRFEILK-LYTKKV--PLDANVDLEAIATSCNGYVGADLEALCREAT 241
F R EILK L KK +DL+++A G++ DL L A
Sbjct: 695 FQSFCKIPTPDQAQRVEILKSLIVKKSFQVCQTTLDLDSVAKETEGFMARDLNLLLERAI 754
Query: 242 MSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKK 300
+ +S+ C +D+R A P ++ P E IGGL + ++
Sbjct: 755 HANTLHNSEDLSC--------KDFRQALQGFTPPSLWDAQLQAPSGAGMERIGGLHEARQ 806
Query: 301 KLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAEL 360
L + P K+ FS L + G LL+G PG G EL
Sbjct: 807 LLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPEL 866
Query: 361 YSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTE 420
S Y+G SE +R+ FQRA+ A P I+FFDE D + +RG +T +T +R+++ LLT+
Sbjct: 867 LSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRRG-HDNTGVT--DRVVNQLLTQ 923
Query: 421 MDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVG 480
+DG+E G+ VLAA++RP ID AL+RPGR D LY PPPD AR EILR T ++ +
Sbjct: 924 LDGVEGLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDRAARLEILRALTHSVPLA 983
Query: 481 DDVDLRSIAEETELFTGAELEGLCREAGIVALREDI 516
DVDL IA TELFTGA+L+ L A + A+ +
Sbjct: 984 ADVDLDQIAGATELFTGADLKALLYNAQLEAIHSSL 1019
Score = 354 (129.7 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 90/236 (38%), Positives = 127/236 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG A + L ++I P Y L L+ G+LLYG PGTGKT L AV +E G
Sbjct: 796 ERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESG 855
Query: 79 AH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
+ +++ P + K ++G SE+A+R+ F +A KP ++F DE D+L PRR H
Sbjct: 856 MNFISIKGPELLSK-YIGASEQAVRDVFQRAQQ----AKPCILFFDEFDSLAPRRGHDNT 910
Query: 138 QDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ +QL T +D + + V V+A+++R D IDPAL R GR D
Sbjct: 911 GVTDRVVNQLLTQLDGVE----GLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDR 966
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDAN 252
R EIL+ T VPL A+VDL+ IA + + GADL+AL A + A+ S N
Sbjct: 967 AARLEILRALTHSVPLAADVDLDQIAGATELFTGADLKALLYNAQLEAIHSSLGPN 1022
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 433 (157.5 bits), Expect = 5.3e-52, Sum P(3) = 5.3e-52
Identities = 91/238 (38%), Positives = 136/238 (57%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
++P V W+D+GGL D+K + V+ P+ H FS G+ G LL+GPPG
Sbjct: 651 KVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 709
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MY+GESE +R+ F++AR A P +IFFDE D + RG S
Sbjct: 710 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGAS 769
Query: 403 SSTSITVGERLLSTLLTEMDGL-EQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP- 460
+ V +R++S +L E+DGL + ++ + ++ A+NRP ID AL+RPGRFD +LYV
Sbjct: 770 GDSG-GVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 828
Query: 461 PDLEARHEILRVHTRNMKVGDDVDLRSIAEET-ELFTGAELEGLCREAGIVALREDIS 517
D R +L+ TR K+ +DV L S+A++ FTGA++ LC +A A + +S
Sbjct: 829 ADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVS 886
Score = 344 (126.2 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 92/260 (35%), Positives = 136/260 (52%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW + +GG ++ + + PLL+ GL+ G+LLYGPPGTGKT L +
Sbjct: 654 NVKW---DDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 709
Query: 72 AVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
AV EC + L+V P ++ ++GESEK +R+ F +A S +P V+F DE+D+L P
Sbjct: 710 AVATECSLNFLSVKGPELINM-YIGESEKNVRDIFEKARS----ARPCVIFFDELDSLAP 764
Query: 131 RR----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ SQ+ +D S + ++ ++NR D IDPAL R GRFD
Sbjct: 765 ARGASGDSGGVMD-RVVSQMLAEIDGLSDSSQDL---FIIGASNRPDLIDPALLRPGRFD 820
Query: 187 XXXXXXXXXXXX-RFEILKLYTKKVPLDANVDLEAIATSC-NGYVGADLEALCREATMSA 244
R +LK T+K L +V L ++A C + + GAD+ ALC +A A
Sbjct: 821 KLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQA 880
Query: 245 VKRSSDANECAGVLSVTMED 264
KR ++ +G + T ED
Sbjct: 881 AKRKVSKSD-SGDMP-TEED 898
Score = 106 (42.4 bits), Expect = 5.3e-52, Sum P(3) = 5.3e-52
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 28 VEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPH 87
V L +++ PL S+ A KL + +LL+G PG GK ++V+ V R G H+ S H
Sbjct: 356 VNILASVLSPPLCPSALASKLRV----AVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCH 411
Query: 88 SVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
S+ + ++ AL + F+ A ++ P+++ + D
Sbjct: 412 SLLASSERKTSTALAQTFNMARRYS----PTILLLRHFD 446
Score = 58 (25.5 bits), Expect = 5.3e-52, Sum P(3) = 5.3e-52
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 153 NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL 212
N+ K V+++AS + I P +RR F R E+L + V
Sbjct: 497 NEVGKFRGHQVLLIASAESTEGISPTIRRC--FSHEIRMGSLNDEQRSEMLSQSLQGVSQ 554
Query: 213 DANVD----LEAIATSCNGYVGADLEALCREA 240
N+ ++ + +G++ DL+AL +A
Sbjct: 555 FLNISSDEFMKGLVGQTSGFLPRDLQALVADA 586
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 528 (190.9 bits), Expect = 8.8e-50, P = 8.8e-50
Identities = 167/526 (31%), Positives = 254/526 (48%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ E + W + G + + VE L +I P L S L LK +LL GP G+GK
Sbjct: 518 VLPEASSFWTSLSPPGLS-STVEKLITIIQ-PHLNEST---LILKRGCSILLMGPNGSGK 572
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
+ VRAV R HL + ++ SE ++ F +A H P ++ + +
Sbjct: 573 FTAVRAVSRRLHLHLIKVDCVTLCADTAAASEAKIKSVFERAELH----HPCLLLLRNLQ 628
Query: 127 ALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
L RD E D R+A+ L L+ + S VVVV S + + + + F
Sbjct: 629 LLGQSRDGA-ETDCRVAATLCQLIAAVHTS------VVVVGSVSSQHELPSDVMAA--FV 679
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +L ++ + L +V+L IA G+V DL AL A +A +
Sbjct: 680 HQVAIESLSEDQRRMVLSSLSEDLLLGKDVNLGRIAKQTAGFVLGDLCALLTNAGKAAHR 739
Query: 247 RS---------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIG 293
R S+ E C +SVT ED+ A V+ + ++ + +IP V+W+D+G
Sbjct: 740 RLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQEAHSQAIGAPKIPAVSWQDVG 799
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL+ +KK++ ++ P++H S LG+ G LL+GPPG
Sbjct: 800 GLQQVKKEILDTIQLPLEHPELLS-LGLRR-SGLLLYGPPGTGKTLLAKAVATECTMTFL 857
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL +MYVG+SE +R +AR AAP IIFFDE D + RG S + V +R+
Sbjct: 858 SVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDSLAPNRGHSGDSG-GVMDRV 916
Query: 414 LSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVP-PPDLEARHEILRV 472
+S LL E+DGL + + V+ ATNRP +D +L+RPGRFD ++YV D E++ ++L+
Sbjct: 917 VSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRESQLQVLKA 976
Query: 473 HTRNMKVGDDVDLRSIAEETE-LFTGAELEGLCREAGIVALREDIS 517
R KV V L I E TGA+L LC +A + A++ IS
Sbjct: 977 ILRKFKVDASVCLSDIVESCPPRLTGADLYSLCSDAMMCAVKRKIS 1022
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 521 (188.5 bits), Expect = 3.3e-49, P = 3.3e-49
Identities = 152/508 (29%), Positives = 250/508 (49%)
Query: 57 LLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGK 116
LL+G P TGKT V V A + IS + A E L + F Q + +
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKL-DMFVQ---NVVKSP 481
Query: 117 PSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPS-KTSVPHVVVVASTNRVDAI 175
+++F+ ++D L D E ++ S+ ++ S K+ +V+ + + ++ I
Sbjct: 482 CAIIFVKDLDVLSISSD---EGNIVPGSKSIQILLSKIDLVKSPQGRYIVIGTCHSIEKI 538
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
+ F+ R E+LK+Y V +D + L+ +A N +LE
Sbjct: 539 PYEILSESFFELKFSELEMDE--RLELLKIYANNVIIDKRISLKDVALKTNSMSFGELEC 596
Query: 236 LCREATMSAV---KRSSDANECAGVLS---VTMEDWRHARSVVGPSITRGVTVEIPKVTW 289
L T +AV KR+ N+ +LS +T +D + + + + + +PKV W
Sbjct: 597 LPDHMTKAAVDRIKRTGYDNDSI-ILSGPIITEQDVDVSINRIRKEKSNTIFT-VPKVNW 654
Query: 290 EDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXX 349
+DIGGL + K L+ ++ P++ FS+ G+ P G LL+GPPG
Sbjct: 655 DDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELS 713
Query: 350 XXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITV 409
G EL +MYVGESEA +RN F++AR ++P +IFFDE D + RG SS + V
Sbjct: 714 LEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG-NV 772
Query: 410 GERLLSTLLTEMDGL--EQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVP-PPDLEAR 466
+R++S LL E+D + + K + V+ ATNRP +D +L+RPGRFD ++Y+ E++
Sbjct: 773 MDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESK 832
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETEL-FTGAELEGLCREAGIVALRE-----DI---- 516
+LR T+ K+ + +DL IA+ FTGA++ LC +A + A++ D+
Sbjct: 833 ASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEIDLLIQA 892
Query: 517 SATAVRNRHF---QTVKDSLKPALTKEE 541
S T + F +DSL+ +TKE+
Sbjct: 893 SGTDLSTEEFFKRNENQDSLELRITKED 920
Score = 361 (132.1 bits), Expect = 3.5e-30, P = 3.5e-30
Identities = 93/255 (36%), Positives = 135/255 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPR-GLLLYG 60
E I + W + IGG A LR+ + PL + + GLK PR G+LLYG
Sbjct: 641 EKSNTIFTVPKVNW---DDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLK-PRSGVLLYG 695
Query: 61 PPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PPGTGKT L +AV E I + +VGESE +R F +A + + P V+
Sbjct: 696 PPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSS----PCVI 751
Query: 121 FIDEIDALCPRRDHRREQ-DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDP 177
F DE+D++ P R + + +V R+ SQL +DS SK + +V V+ +TNR D +DP
Sbjct: 752 FFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSI--SKDNNKYVFVIGATNRPDLLDP 809
Query: 178 ALRRSGRFDXXXXXXXXXXX-XRFEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEA 235
+L R GRFD + +L+ TK LD +DL IA +C+ + GAD+ A
Sbjct: 810 SLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYA 869
Query: 236 LCREATMSAVKRSSD 250
LC +A +SA+KR ++
Sbjct: 870 LCSDAVLSAIKRKTN 884
>DICTYBASE|DDB_G0268066 [details] [associations]
symbol:DDB_G0268066 "putative ATPase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0268066 GO:GO:0005524
EMBL:AAFI02000003 eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_647530.1
ProteinModelPortal:Q55FK3 EnsemblProtists:DDB0189755 GeneID:8616337
KEGG:ddi:DDB_G0268066 OMA:ANFIPIN Uniprot:Q55FK3
Length = 864
Score = 401 (146.2 bits), Expect = 3.8e-49, Sum P(2) = 3.8e-49
Identities = 90/270 (33%), Positives = 146/270 (54%)
Query: 280 VTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
++ IPKV W DIGGL K L++ V W +HS + RLG+ +G L++GPPG
Sbjct: 587 ISPSIPKVLWSDIGGLEVAKDVLKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTM 646
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD-VVGAK 398
+EL +GESE L F+ A ++PSIIF DE + G K
Sbjct: 647 LAKCVAFEAKANFIPINISELIQGEIGESEKTLSEIFRIAINSSPSIIFIDEIQSIFGLK 706
Query: 399 RGGSSSTSITVGERLLSTLLTEMDGL----EQAKGILVLAATNRPHAIDAALMRPGRFDL 454
++S+ ++L+S LL E+D + +++LAATN P AID + +R GRFD
Sbjct: 707 ESSNNSS-----KKLISQLLIELDNTIGNNDGGNRVMILAATNMPQAIDPSFLRSGRFDK 761
Query: 455 VLYVPPPDLEARHEILRVHTRN--MKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
+Y+ PP+++ R I +N +KV VDL +A+ T FTG+++ L +++G+ A+
Sbjct: 762 TVYIGPPEVDERKSIFETLIKNSSIKVDSTVDLNQLAKYTINFTGSDINALLKKSGLYAI 821
Query: 513 REDISATAVRNRHFQTVKDSLKPALTKEEI 542
+ DI+ T++ V +KP+++ ++I
Sbjct: 822 QRDINVTSITMDDIMKVFWEMKPSVSPDQI 851
Score = 356 (130.4 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 86/272 (31%), Positives = 144/272 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG A + L+E++ + +S ++LG+K P+G+L+YGPPGTGKT L + V E A+
Sbjct: 599 IGGLEVAKDVLKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTMLAKCVAFEAKAN 658
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
I+ + + +GESEK L E F A ++ PS++FIDEI ++ ++
Sbjct: 659 FIPINISELIQGEIGESEKTLSEIFRIA----INSSPSIIFIDEIQSIFGLKESSNNSSK 714
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
++ SQL +D+ + V+++A+TN AIDP+ RSGRFD R
Sbjct: 715 KLISQLLIELDNTIGNNDGGNRVMILAATNMPQAIDPSFLRSGRFDKTVYIGPPEVDERK 774
Query: 201 EILKLYTKK--VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
I + K + +D+ VDL +A + G+D+ AL +++ + A++R D N V
Sbjct: 775 SIFETLIKNSSIKVDSTVDLNQLAKYTINFTGSDINALLKKSGLYAIQR--DIN----VT 828
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEIPKVTWE 290
S+TM+D + PS++ ++ + WE
Sbjct: 829 SITMDDIMKVFWEMKPSVSPDQIFQLKQ--WE 858
Score = 164 (62.8 bits), Expect = 3.8e-49, Sum P(2) = 3.8e-49
Identities = 54/227 (23%), Positives = 106/227 (46%)
Query: 40 LYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEK 99
L S + +LG+ P+ LLLYGP GK++L+ + ++ G + I+ + K + K
Sbjct: 322 LTSKRYSELGISKPKSLLLYGPQSCGKSTLINLISKQMGIKIFHINLSDLVKYQ--PNTK 379
Query: 100 ALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-------REQDVRIASQLFT--LM 150
L + QA + + S++ D ID + P+ D+ +Q++ LF L
Sbjct: 380 GLLLKYYQAKQNTTTN--SILLFDNIDEIFPQFDNTDSSNKNSNQQNINQLMNLFLNLLN 437
Query: 151 DSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEI----LKLY 206
+ N+ + ++ ++ TN++ ++ +R + F+ R +I LK +
Sbjct: 438 NDNENNDNENNNIFIIGITNKIKILNNFIRSN--FEEEIRIDPPNQEKRKQIFNWNLKGF 495
Query: 207 TKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
+ + + + +E I + NG +G D+ LCR A + ++KR NE
Sbjct: 496 GENIENNLKI-IEKINENSNGLMGGDITILCRNAKIKSLKRYKIENE 541
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 521 (188.5 bits), Expect = 6.8e-49, P = 6.8e-49
Identities = 138/486 (28%), Positives = 241/486 (49%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHA--- 112
LLL GP G GK +L+ V ++ G H+ + + ++ + + +R QAS+
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 113 LSGKPSVVFIDEIDALCPRRDHRREQDVR--IASQLFTLMDSNKPSKTSVPHVVVVAST- 169
L K V ++ + ++E ++ + + L + DSN + S + +++ T
Sbjct: 730 LILKNFEVLEQTAQSM---QQEKKESNLSQTLINILKDINDSNTSNINSNKYPLIITVTV 786
Query: 170 NRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDAN--VDLEAIATSCNG 227
N +D + +R F RF+ILK TK +P+D V ++ ++
Sbjct: 787 NSMDELSNKVRNW--FKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNLSIRTAS 844
Query: 228 YVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTV----- 282
++ ++L AL + ++++A+KR + +E + V+G I + ++
Sbjct: 845 FLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQ 904
Query: 283 -------EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGC 335
+IP V+W+D+GGL ++K ++ ++ P++H F+ GI G LL GPPG
Sbjct: 905 SSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRSGILLFGPPGT 963
Query: 336 XXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVV 395
G EL +MY+GESE +R F +AR A P +IFFDE D +
Sbjct: 964 GKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSL 1023
Query: 396 GAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLV 455
RG + + V +R++S LL E+DG++++ + ++ ATNRP +D++LMRPGR D +
Sbjct: 1024 APSRGNGADSG-GVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRL 1082
Query: 456 LYVP-PPDLEARHEILRVHTRNMKVGDDVDLRSIAEETEL-FTGAELEGLCREAGIVALR 513
LY+ + E + +IL+ TR + DDVDLR + E + TGA+ L +A A
Sbjct: 1083 LYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFH 1142
Query: 514 EDISAT 519
E I+A+
Sbjct: 1143 ERITAS 1148
Score = 423 (154.0 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 95/277 (34%), Positives = 150/277 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+IP V+W+D+GGL ++K ++ ++ P++H F+ GI G LL GPPG
Sbjct: 912 KIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRSGILLFGPPGTGKTLLAK 970
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MY+GESE +R F +AR A P +IFFDE D + RG
Sbjct: 971 AIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNG 1030
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVP-PP 461
+ + V +R++S LL E+DG++++ + ++ ATNRP +D++LMRPGR D +LY+
Sbjct: 1031 ADSG-GVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISS 1089
Query: 462 DLEARHEILRVHTRNMKVGDDVDLRSIAEETEL-FTGAELEGLCREAGIVALREDISATA 520
+ E + +IL+ TR + DDVDLR + E + TGA+ L +A A E I+A+
Sbjct: 1090 EKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITASI 1149
Query: 521 --------------VRNRHFQTVKDSLKPALTKEEID 543
V HF +SL P+++ +E++
Sbjct: 1150 NGEINEEEQNQKLIVYQNHFIKAVNSLVPSVSLDELE 1186
Score = 293 (108.2 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 88/298 (29%), Positives = 148/298 (49%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQ-AQKLGLKWPRGLLLYGPPGTGKTSLV 70
N W + +GG + + I PL + A +G + G+LL+GPPGTGKT L
Sbjct: 915 NVSW---DDVGGLANVKSEIMDTIQLPLEHPHLFASGIGKR--SGILLFGPPGTGKTLLA 969
Query: 71 RAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+A+ EC + L+V P ++ ++GESEK +RE F++A KP V+F DE+D+L
Sbjct: 970 KAIATECSLNFLSVKGPELINM-YIGESEKNIREIFNKARQ----AKPCVIFFDELDSLA 1024
Query: 130 PRRDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
P R + + R+ SQL +D + S V ++ +TNR D +D +L R GR D
Sbjct: 1025 PSRGNGADSGGVMDRVVSQLLAELDGMQKSSD----VFIIGATNRPDLLDSSLMRPGRLD 1080
Query: 187 XXXXXXXXXXXX-RFEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSA 244
+F+IL+ T+K L +VDL + +C GAD AL +A +A
Sbjct: 1081 RLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNA 1140
Query: 245 VKRSSDANECAGVLSVTMEDWRHARSVVGPS-ITRGVTVEIPKVTWEDIGGLRDLKKK 301
A+ G ++ E+ ++ + +V + + V +P V+ +++ ++K+
Sbjct: 1141 FHERITAS-INGEIN---EEEQNQKLIVYQNHFIKAVNSLVPSVSLDELEYYHKVQKQ 1194
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 96/232 (41%), Positives = 140/232 (60%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P V +EDIGGL +++++ VE P+KH F ++GI P +G LL+GPPG
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G+EL ++GE +L+++ F+ A+ APSIIF DE D + AKR +
Sbjct: 223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ +R L LL EMDG + + ++ ATNRP +D A++RPGRFD ++ VP PD
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPD 342
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRE 514
+ R EIL++HTR M + +DV+L IA+ TE GAEL+ +C EAG+ A+RE
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRE 394
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 92/251 (36%), Positives = 138/251 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ +RE++ PL + +K+G++ P+G+LLYGPPGTGKT L +AV E
Sbjct: 170 EDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETN 229
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
A + + K +GE +++ F A A PS++FIDEIDA+ +R D
Sbjct: 230 ATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKA----PSIIFIDEIDAIAAKRTDALTG 285
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + L L+ + + V ++ +TNR D +DPA+ R GRFD
Sbjct: 286 GDREVQRTLMQLL-AEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEK 344
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
R EILK++T+K+ L +V+LE IA G VGA+L+A+C EA M+A++ D
Sbjct: 345 GRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDY------ 398
Query: 258 LSVTMEDWRHA 268
VTM+D+R A
Sbjct: 399 --VTMDDFRKA 407
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 102/244 (41%), Positives = 142/244 (58%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + +IP T+E +GGL K++++ +E P+KH F LGI +G LL+G
Sbjct: 127 VDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYG 186
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+GE ++R F AR APSIIF DE
Sbjct: 187 PPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 246
Query: 392 ADVVGAKRGGSSSTS-ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPG 450
D +G+ R SS S + +R + LL ++DG E K I V+ ATNR +D AL+RPG
Sbjct: 247 IDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPG 306
Query: 451 RFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIV 510
R D + PPP EAR EILR+H+R+M + +DL+SIAE+ +GAEL+G+C EAG+
Sbjct: 307 RIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMF 366
Query: 511 ALRE 514
ALRE
Sbjct: 367 ALRE 370
Score = 355 (130.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 79/233 (33%), Positives = 129/233 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 145 EMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTD 204
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-- 136
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 205 CKFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRSDSSGG 260
Query: 137 --EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
+ +V R +L +D + +K ++ V+ +TNR+D +DPAL R GR D
Sbjct: 261 SGDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDPALLRPGRIDRKIEFPP 316
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EIL+++++ + L +DL++IA NG GA+L+ +C EA M A++
Sbjct: 317 PSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALR 369
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 427 (155.4 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 104/313 (33%), Positives = 167/313 (53%)
Query: 212 LDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA---NECAGVLSVT--MEDWR 266
L ++D IA +GY+ DL L A +A+ RS + ++ L V M+D+
Sbjct: 771 LQPDLDFLDIAGRTDGYMPGDLLLLVTRARNAALSRSLEETAEDDHLNALGVPLGMQDFD 830
Query: 267 HARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRG 326
A P+ V+++ + ++ IGGL + ++ L + +++P K++ F++ + G
Sbjct: 831 EALKGFTPASLHNVSLQSSTIKFDSIGGLSETRRVLLETLQYPTKYAPIFAQCPLRLRSG 890
Query: 327 ALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSI 386
LL+G PGC G E+ + Y+G SE +R+ F+RA A P +
Sbjct: 891 LLLYGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKPCV 950
Query: 387 IFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAAL 446
+FFDE D + KRG ST +T +R+++ LLT+MDG E G+ VLAAT+RP ID AL
Sbjct: 951 LFFDEFDSIAPKRG-HDSTGVT--DRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPAL 1007
Query: 447 MRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDV-----DLRSIAEETELFTGAELE 501
+RPGR D L P+ E R +I+R +KVG++V +L +A TE FTGA+L+
Sbjct: 1008 LRPGRLDKSLICDFPNAEDRLDIIRALASKVKVGEEVLANEAELLELARRTEGFTGADLQ 1067
Query: 502 GLCREAGIVALRE 514
L + + A+ +
Sbjct: 1068 ALMSNSQLEAIHD 1080
Score = 315 (115.9 bits), Expect = 9.5e-25, P = 9.5e-25
Identities = 82/234 (35%), Positives = 123/234 (52%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG L E + +P Y+ + L+ GLLLYG PG GKT L AV ECG
Sbjct: 854 DSIGGLSETRRVLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTLLASAVAGECG 913
Query: 79 AH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
+ ++V P ++K ++G SEK++R+ F +AS+ KP V+F DE D++ P+R H
Sbjct: 914 LNFISVKGPEILNK-YIGASEKSVRDLFERASA----AKPCVLFFDEFDSIAPKRGHDST 968
Query: 138 QDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ +QL T MD + + V V+A+T+R D IDPAL R GR D
Sbjct: 969 GVTDRVVNQLLTQMDGAE----GLSGVYVLAATSRPDLIDPALLRPGRLDKSLICDFPNA 1024
Query: 197 XXRFEILKLYTKKVPLDANV-----DLEAIATSCNGYVGADLEALCREATMSAV 245
R +I++ KV + V +L +A G+ GADL+AL + + A+
Sbjct: 1025 EDRLDIIRALASKVKVGEEVLANEAELLELARRTEGFTGADLQALMSNSQLEAI 1078
Score = 92 (37.4 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 56 LLLYGPPGTGKTS----LVRAVVRECGAHLTVISPHSV--HKAHVGESEKALREAFSQAS 109
+LL G G+GKTS + A+ R+ H T + S+ ++ V + L F AS
Sbjct: 556 VLLTGALGSGKTSVGKSIANALKRDSFYHTTYFTCRSLTNDESRVATVRETLNRLFMNAS 615
Query: 110 SHALSGKPSVVFIDEIDALCP 130
A G ++V +D++D LCP
Sbjct: 616 WGARLGGKAIVILDDLDKLCP 636
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 456 (165.6 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 139 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 198
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 199 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 258
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 259 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 316
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 317 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 376
Query: 510 VALRE 514
ALRE
Sbjct: 377 YALRE 381
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 157 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 216
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 217 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 272
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 328
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 329 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 380
Score = 37 (18.1 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 210 VPLDANVDLEAIATSC 225
V +D N+D+ + +C
Sbjct: 105 VDIDKNIDINDVTPNC 120
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 453 (164.5 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 95/243 (39%), Positives = 140/243 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E +GGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 130 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 189
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 190 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G+ R S S + +R + LL ++DG E K I V+ ATNR +D AL+RPGR
Sbjct: 250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 309
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+ A
Sbjct: 310 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYA 369
Query: 512 LRE 514
LRE
Sbjct: 370 LRE 372
Score = 327 (120.2 bits), Expect = 5.3e-29, P = 5.3e-29
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 148 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 207
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-- 136
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 208 CTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRIESGSG 263
Query: 137 -EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +DPAL R GR D
Sbjct: 264 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 319
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 320 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 371
Score = 39 (18.8 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 210 VPLDANVDLEAIATSC 225
V LD N+D+ + +C
Sbjct: 96 VDLDKNIDINDVTPNC 111
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 434 (157.8 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 107/316 (33%), Positives = 164/316 (51%)
Query: 215 NVDLEAIATSCNGYVGADLEALCREATMSAVKR----SSDANEC---------AGVLSVT 261
+++ + +A G DL ++ +++ A+KR S D+ GV++
Sbjct: 726 DINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQNIVNIGNGGVINWV 785
Query: 262 MEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLG 320
+D+ A + + + IP V WEDIGGL +K ++ ++ P+KH F+ G
Sbjct: 786 PDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-G 844
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ G L +GPPG G EL +MY+GESEA +R FQRAR
Sbjct: 845 LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRAR 904
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL--EQAKGILVLAATNR 438
A P +IFFDE D V KRG + V +R++S LL E+DG+ E G+ V+ ATNR
Sbjct: 905 DAKPCVIFFDELDSVAPKRGNQGDSG-GVMDRIVSQLLAELDGMSSEGGDGVFVVGATNR 963
Query: 439 PHAIDAALMRPGRFDLVLYVPPPDLEARH-EILRVHTRNMKVGDDVDLRSIAEETEL-FT 496
P +D AL+RPGRFD +LY+ D + + +IL TR K+ D+V+L +A + FT
Sbjct: 964 PDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFT 1023
Query: 497 GAELEGLCREAGIVAL 512
GA+ LC ++ + A+
Sbjct: 1024 GADFYALCSDSMLNAM 1039
Score = 324 (119.1 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 87/247 (35%), Positives = 125/247 (50%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW E IGG + + + I PL + GLK G+L YGPPGTGKT L +
Sbjct: 811 NVKW---EDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAK 866
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ + + + ++GESE +R F +A KP V+F DE+D++ P+
Sbjct: 867 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPCVIFFDELDSVAPK 922
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
R ++ + RI SQL +D S V VV +TNR D +D AL R GRFD
Sbjct: 923 RGNQGDSGGVMDRIVSQLLAELDGM--SSEGGDGVFVVGATNRPDLLDEALLRPGRFDKM 980
Query: 189 XXXXXXXXXXR-FEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSAVK 246
+ +IL+ T+K LD NV+LE +A C+ + GAD ALC ++ ++A+
Sbjct: 981 LYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLNAMT 1040
Query: 247 RSSDANE 253
R ANE
Sbjct: 1041 RV--ANE 1045
Score = 81 (33.6 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 51/224 (22%), Positives = 89/224 (39%)
Query: 45 AQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT------VISPHSVHKAH---VG 95
A K+ LK LL G GKT+LVR E G +L +++P K G
Sbjct: 543 ASKINLKTSI-LLTSMSRGIGKTTLVRNSCIELGLNLIELDCFDLLNPGQELKTIGLLTG 601
Query: 96 ESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKP 155
+ +K + S +S H V+++ I+ LCP+ D + S ++
Sbjct: 602 KIDKLIANVQSTSSFH-------VIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHD 654
Query: 156 SKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR-FEIL------KLYTK 208
+ ++V+V S N D ++ L+ +F F+ L K +TK
Sbjct: 655 YLKTYRNLVIVMSCNDYDKLNDNLKSIIKFTIEFTVPSENERLEIFKFLINNEKNKTFTK 714
Query: 209 KV---PLDANVDL--EAIATSCNGYVGADLEALCREATMSAVKR 247
+ P D+ + +A G DL ++ +++ A+KR
Sbjct: 715 DINSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKR 758
Score = 41 (19.5 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 79 AHLTVISPHSVHKAHVGESEKALREAF-SQA---SSHALSGKPSVVFIDEIDALC-PRRD 133
+ + V PH +++ +S++A+++ F +Q + + ++ S+ I+ LC P
Sbjct: 134 SQIFVSIPHEIYQLLHEKSQQAIKQKFLTQLLVDNGNVVNEGDSIRLINGTVNLCEPLTQ 193
Query: 134 HRREQDVRI 142
R E D I
Sbjct: 194 GRVEYDTNI 202
Score = 41 (19.5 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
A E + V MED+ A++ + PS++ KV E+ G ++ K+ QQ
Sbjct: 1075 ATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVR-ENFEGGKEKAKQQQQ 1127
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 434 (157.8 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 107/316 (33%), Positives = 164/316 (51%)
Query: 215 NVDLEAIATSCNGYVGADLEALCREATMSAVKR----SSDANEC---------AGVLSVT 261
+++ + +A G DL ++ +++ A+KR S D+ GV++
Sbjct: 726 DINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQNIVNIGNGGVINWV 785
Query: 262 MEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLG 320
+D+ A + + + IP V WEDIGGL +K ++ ++ P+KH F+ G
Sbjct: 786 PDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-G 844
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ G L +GPPG G EL +MY+GESEA +R FQRAR
Sbjct: 845 LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRAR 904
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL--EQAKGILVLAATNR 438
A P +IFFDE D V KRG + V +R++S LL E+DG+ E G+ V+ ATNR
Sbjct: 905 DAKPCVIFFDELDSVAPKRGNQGDSG-GVMDRIVSQLLAELDGMSSEGGDGVFVVGATNR 963
Query: 439 PHAIDAALMRPGRFDLVLYVPPPDLEARH-EILRVHTRNMKVGDDVDLRSIAEETEL-FT 496
P +D AL+RPGRFD +LY+ D + + +IL TR K+ D+V+L +A + FT
Sbjct: 964 PDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFT 1023
Query: 497 GAELEGLCREAGIVAL 512
GA+ LC ++ + A+
Sbjct: 1024 GADFYALCSDSMLNAM 1039
Score = 324 (119.1 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 87/247 (35%), Positives = 125/247 (50%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW E IGG + + + I PL + GLK G+L YGPPGTGKT L +
Sbjct: 811 NVKW---EDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAK 866
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ + + + ++GESE +R F +A KP V+F DE+D++ P+
Sbjct: 867 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPCVIFFDELDSVAPK 922
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
R ++ + RI SQL +D S V VV +TNR D +D AL R GRFD
Sbjct: 923 RGNQGDSGGVMDRIVSQLLAELDGM--SSEGGDGVFVVGATNRPDLLDEALLRPGRFDKM 980
Query: 189 XXXXXXXXXXR-FEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSAVK 246
+ +IL+ T+K LD NV+LE +A C+ + GAD ALC ++ ++A+
Sbjct: 981 LYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLNAMT 1040
Query: 247 RSSDANE 253
R ANE
Sbjct: 1041 RV--ANE 1045
Score = 81 (33.6 bits), Expect = 3.5e-45, Sum P(2) = 3.5e-45
Identities = 51/224 (22%), Positives = 89/224 (39%)
Query: 45 AQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT------VISPHSVHKAH---VG 95
A K+ LK LL G GKT+LVR E G +L +++P K G
Sbjct: 543 ASKINLKTSI-LLTSMSRGIGKTTLVRNSCIELGLNLIELDCFDLLNPGQELKTIGLLTG 601
Query: 96 ESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKP 155
+ +K + S +S H V+++ I+ LCP+ D + S ++
Sbjct: 602 KIDKLIANVQSTSSFH-------VIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHD 654
Query: 156 SKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR-FEIL------KLYTK 208
+ ++V+V S N D ++ L+ +F F+ L K +TK
Sbjct: 655 YLKTYRNLVIVMSCNDYDKLNDNLKSIIKFTIEFTVPSENERLEIFKFLINNEKNKTFTK 714
Query: 209 KV---PLDANVDL--EAIATSCNGYVGADLEALCREATMSAVKR 247
+ P D+ + +A G DL ++ +++ A+KR
Sbjct: 715 DINSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKR 758
Score = 41 (19.5 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 79 AHLTVISPHSVHKAHVGESEKALREAF-SQA---SSHALSGKPSVVFIDEIDALC-PRRD 133
+ + V PH +++ +S++A+++ F +Q + + ++ S+ I+ LC P
Sbjct: 134 SQIFVSIPHEIYQLLHEKSQQAIKQKFLTQLLVDNGNVVNEGDSIRLINGTVNLCEPLTQ 193
Query: 134 HRREQDVRI 142
R E D I
Sbjct: 194 GRVEYDTNI 202
Score = 41 (19.5 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
A E + V MED+ A++ + PS++ KV E+ G ++ K+ QQ
Sbjct: 1075 ATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVR-ENFEGGKEKAKQQQQ 1127
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 481 (174.4 bits), Expect = 8.9e-45, P = 8.9e-45
Identities = 124/416 (29%), Positives = 204/416 (49%)
Query: 117 PSVVFIDEIDALCPRRDHRREQD-VRIASQLFTLMDSNKPSKT-SVPHVVVVASTNRVDA 174
P+V+F+ +D++ + ++ + +++ + M T P V S N +D
Sbjct: 542 PAVIFLAHLDSILLDVNANQDPEAIKLQKSINFEMSKLLDDFTFKFPGTTFVGSVNNIDN 601
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRF--------EILKLYTKKVPLDA--NVDLEAIATS 224
+ + R RF+ R E+ + +KVP+ N+ ++++
Sbjct: 602 VPSSFRSHMRFEILVPVPSEAQRLRIFQWYLSSHELNRDVQQKVPVSYMDNISFSSLSSY 661
Query: 225 CNGYVGADLEALCREATMSAVKRS-SDANECAGV---LSVTMEDWRHARSVVGPSITRGV 280
G D++++ A M+A R ++ +C + + +T ED A S + +
Sbjct: 662 SAGLTPLDIKSIVETARMTATARFYQESKKCGWLPQSILITQEDLSKATSKARNEFSVSI 721
Query: 281 TV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
+IP VTW+DIGG+ +K ++ ++ P+KH F+ G+ G L +GPPG
Sbjct: 722 GAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTL 780
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKR 399
G EL +MY+GESEA +R FQ+AR A P +IFFDE D V KR
Sbjct: 781 MAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKR 840
Query: 400 GGSSSTSITVGERLLSTLLTEMDGLE-QAKGILVLAATNRPHAIDAALMRPGRFDLVLYV 458
G + V +R++S LL E+DG+ A G+ V+ ATNRP +D AL+RPGRFD +LY+
Sbjct: 841 GNQGDSG-GVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYL 899
Query: 459 PPPDLEARH-EILRVHTRNMKVGDDVDLRSIAEETEL-FTGAELEGLCREAGIVAL 512
PD + + IL TR + +DV L +A+ +TGA+ LC +A + A+
Sbjct: 900 GIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAM 955
Score = 295 (108.9 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 80/241 (33%), Positives = 116/241 (48%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W + IGG + + I PL + G+K G+L YGPPGTGKT + +
Sbjct: 728 NVTW---DDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAK 783
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ + + + ++GESE +R F +A KP V+F DEID++ P+
Sbjct: 784 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARE----AKPCVIFFDEIDSVAPK 839
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
R ++ + RI SQL +D T V V+ +TNR D +D AL R GRFD
Sbjct: 840 RGNQGDSGGVMDRIVSQLLAELDG---MSTDADGVFVIGATNRPDLLDEALLRPGRFDKL 896
Query: 189 XXXXXXXXXXR-FEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSAVK 246
+ IL+ T+K LD +V L +A C Y GAD ALC +A ++A+
Sbjct: 897 LYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMS 956
Query: 247 R 247
R
Sbjct: 957 R 957
Score = 39 (18.8 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 260 VTMEDWRHARSVVGPSITR 278
V MED+ A+ + PS++R
Sbjct: 996 VKMEDFLKAQEQLTPSVSR 1014
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 435 (158.2 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 87/242 (35%), Positives = 141/242 (58%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E+P + ++IG L+ +KK L+ P+K+S + LGI+ G LL+GPPGC
Sbjct: 669 EVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAK 728
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G E+ + YVGESE +R F A + P +IFFDE D + R S
Sbjct: 729 AISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICINR--S 786
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
++ S++ +R+++ LL+EMDGL Q +G+ ++A TNRP ID AL+R GRFD ++Y+ P
Sbjct: 787 NNKSVSASDRVVNQLLSEMDGLSQREGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPK 846
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
+ R +IL+ ++NM + +V I++ T ++GA+L G+ RE+ +AL+E ++
Sbjct: 847 YQGRVDILKKLSKNMPIDKNVRFEEISKLTRGYSGADLYGVLRESAFIALQECRDKIDIQ 906
Query: 523 NR 524
N+
Sbjct: 907 NK 908
Score = 365 (133.5 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IG + + L P+ YS+ + LG+ G+LLYGPPG GKT L +A+ E A+
Sbjct: 678 IGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKAISNEMKAN 737
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
I + +VGESEK +RE FS AS + KP ++F DEID++C R + +
Sbjct: 738 FIAIKGPEILNKYVGESEKKVREIFSYASVY----KPCLIFFDEIDSICINRSNNKSVSA 793
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +QL + MD + V ++A+TNR D ID AL RSGRFD
Sbjct: 794 SDRVVNQLLSEMDGLSQREG----VYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQG 849
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK +K +P+D NV E I+ GY GADL + RE+ A++ D
Sbjct: 850 RVDILKKLSKNMPIDKNVRFEEISKLTRGYSGADLYGVLRESAFIALQECRD 901
Score = 74 (31.1 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 58 LYGPPGTGKTSLVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGK 116
++G GTGKT+L A+ ECG I P + LR F +
Sbjct: 289 IFGTSGTGKTTLSYAIAGECGCPFFYIKLPEYIKYISNDNKNNKLRILFEHIKNEY---D 345
Query: 117 PSVVFIDEIDALCPRRD 133
+++ ID+ID + +D
Sbjct: 346 KAILCIDDIDIIFSSKD 362
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 407 (148.3 bits), Expect = 5.3e-44, Sum P(3) = 5.3e-44
Identities = 108/308 (35%), Positives = 158/308 (51%)
Query: 215 NVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGP 274
NV L+ +A G++ DL+ L A ++ +S ++ +S
Sbjct: 547 NV-LQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRTTLD--MSHFAKNLTDMQSSFAD 603
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR-GALLHGPP 333
S+ G ++PKV W DIGGL LK ++Q ++ P+KH +G + R G LL+GPP
Sbjct: 604 SL--GAP-KVPKVYWSDIGGLAKLKDEIQSSIGLPLKH---VHLMGKNLRRSGILLYGPP 657
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G EL +MYVG+SE +R F RAR AAP ++F DE D
Sbjct: 658 GTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELD 717
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL---EQAKGILVLAATNRPHAIDAALMRPG 450
+ RG + + V +R++S LL EMDG+ + +K I +LAATNRP ID AL+RPG
Sbjct: 718 SLAPNRGVAGDSG-GVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPG 776
Query: 451 RFDLVLYVPP-PDLEARHEILRVHTRNMKVGDDVDLRSIAEETEL-FTGAELEGLCREAG 508
RFD + YV P E + +LR T+ + VD+ IAE + +GA+L +C A
Sbjct: 777 RFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAW 836
Query: 509 IVALREDI 516
+ A+R I
Sbjct: 837 LSAVRRTI 844
Score = 358 (131.1 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 103/287 (35%), Positives = 151/287 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPR-GLLLYGPPGTGKTSLVRAVVRECG- 78
IGG + ++ I PL + +G R G+LLYGPPGTGKT + +AV EC
Sbjct: 618 IGGLAKLKDEIQSSIGLPLKH---VHLMGKNLRRSGILLYGPPGTGKTLVAKAVATECNL 674
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR----DH 134
+ L+V P ++ +VG+SE+ +RE FS+A S A P V+F+DE+D+L P R D
Sbjct: 675 SFLSVQGPELLNM-YVGQSEQNVREVFSRARSAA----PCVLFLDELDSLAPNRGVAGDS 729
Query: 135 RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX- 193
D R+ SQL MD TS P + ++A+TNR D IDPAL R GRFD
Sbjct: 730 GGVMD-RVVSQLLAEMDGMSDGDTSKP-IFILAATNRPDLIDPALLRPGRFDKLFYVGPC 787
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRSSDAN 252
+ +L+ T++ LDA VD+E IA + GADL ++C A +SAV+R+ D +
Sbjct: 788 STAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGH 847
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+G +S E V T+ +P ++ +D+ +LK
Sbjct: 848 -LSGTIS-EKELVPENVIVQEEDFTKSFNKFVPSISAKDLEYFNNLK 892
Score = 76 (31.8 bits), Expect = 5.3e-44, Sum P(3) = 5.3e-44
Identities = 38/150 (25%), Positives = 62/150 (41%)
Query: 57 LLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGK 116
LL G G+GK+ LV AV +E G H+ + +E L+ F A S +
Sbjct: 365 LLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVF--AKSQVC--E 420
Query: 117 PSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDS--NKPSKTSVPHVVVVASTNRVDA 174
P ++ + D+ +D+R+ S + N+ K P VVV +++R
Sbjct: 421 PLMICFHNFEIF--GIDNEGNEDLRLLSAFHVQVQELFNRDRKH--PIVVVALTSDR--H 474
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILK 204
+ P ++ G F RFEIL+
Sbjct: 475 LKPMIQ--GLFLEIINIDMPSKEERFEILR 502
Score = 37 (18.1 bits), Expect = 5.3e-44, Sum P(3) = 5.3e-44
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 41 YSSQAQKLGLKWP 53
Y+S Q L KWP
Sbjct: 42 YNSAIQLLAPKWP 54
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 95/245 (38%), Positives = 142/245 (57%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ + ++P T++ IGGL K++++ +E +KH F LGI+ +G LL
Sbjct: 112 SSVDPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLL 171
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 172 YGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 231
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
DE D +G+ R S+ + + +R + LL ++DG E K I ++ ATNR +D AL+RP
Sbjct: 232 DEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRP 291
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP +EAR +ILR+H+R+M + ++L IAE+ +GAEL+G+C EAG+
Sbjct: 292 GRIDRKIEFPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGM 351
Query: 510 VALRE 514
ALRE
Sbjct: 352 YALRE 356
Score = 338 (124.0 bits), Expect = 3.1e-30, P = 3.1e-30
Identities = 77/232 (33%), Positives = 126/232 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG ++ ++E+I L + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 132 DMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 191
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + ++GE + +RE F A HA PS++F+DEID++ R D
Sbjct: 192 CRFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRIDSAGS 247
Query: 138 QDVRIASQLFTLM---DSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
D + + L+ D +P+K ++ ++ +TNR+D +DPAL R GR D
Sbjct: 248 GDSEVQRTMLELLNQLDGFEPTK----NIKIIMATNRLDILDPALLRPGRIDRKIEFPPP 303
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +IL+++++ + L ++L IA NG GA+L+ +C EA M A++
Sbjct: 304 SVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALR 355
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 447 (162.4 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 123/436 (28%), Positives = 210/436 (48%)
Query: 96 ESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR-RDHRREQDVRIASQLFTLMDSN- 153
+S K S +S + P ++ ++ +D + D +R QL + + S
Sbjct: 662 KSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPNDQDPGSKIR-CEQLVSHIKSLC 720
Query: 154 -KPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTK---K 209
K S P +V++A+ ++ +++ F R EIL+ Y K K
Sbjct: 721 FKYQNRSSP-IVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGK 779
Query: 210 VPLDA-NVDLEAIATSCNGYVGADLEALC-REATMSAVKR------SSDANECAGVLSVT 261
D +++L + S GY+G D+E + R +S++K ++D N+ ++ +
Sbjct: 780 QLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDDDNIIEFS 839
Query: 262 MEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGI 321
+ + A+ P +G+ + ++ W+DIGGL ++ L++ +EWP K+ F
Sbjct: 840 IIE--KAKEGYTPITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYPKLFQS--- 894
Query: 322 SPVR---GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQR 378
SP+R G LL+GP GC G EL + Y+G SE +R+ F R
Sbjct: 895 SPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSR 954
Query: 379 ARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNR 438
A A P ++FFDE D + +RG +S +T +R+++ LT++DG+E G+ VLAAT+R
Sbjct: 955 ASSAKPCVLFFDEFDSIAPRRGHDNS-GVT--DRVVNQFLTQLDGVEGLTGVYVLAATSR 1011
Query: 439 PHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGA 498
P ID AL+RPGR D LY P+ R +IL M + + L ++ T+ +TGA
Sbjct: 1012 PDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGA 1071
Query: 499 ELEGLCREAGIVALRE 514
+L L A + ++ E
Sbjct: 1072 DLRALMYNAQLKSIHE 1087
Score = 341 (125.1 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 87/244 (35%), Positives = 127/244 (52%)
Query: 4 KGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPG 63
KG + KW + IGG + L+E I +P Y Q L+ G+LLYGP G
Sbjct: 854 KGIKLHSSEIKW---QDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTG 910
Query: 64 TGKTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFI 122
GKT L A+ ECG + ++V P ++K ++G SE+ +R+ FS+ASS KP V+F
Sbjct: 911 CGKTLLASAIAGECGLNFISVKGPELLNK-YIGSSEQGVRDVFSRASS----AKPCVLFF 965
Query: 123 DEIDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
DE D++ PRR H R+ +Q T +D + + V V+A+T+R D IDPAL R
Sbjct: 966 DEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVE----GLTGVYVLAATSRPDLIDPALLR 1021
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R +IL K+ L ++ LE ++T+ Y GADL AL A
Sbjct: 1022 PGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQ 1081
Query: 242 MSAV 245
+ ++
Sbjct: 1082 LKSI 1085
Score = 50 (22.7 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 15/73 (20%), Positives = 35/73 (47%)
Query: 4 KGRIMSEHNEKW-KAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWP--RGLLLYG 60
K + + ++NE + + IGG ++ +E ++ + + L P G+++ G
Sbjct: 550 KKKSLEDYNEIGDRLFQRIGGMEKQIKQAKEFLSLYMYKDLSVIREQLNTPGVNGMIIAG 609
Query: 61 PPGTGKTSLVRAV 73
G+GK+ L ++
Sbjct: 610 SHGSGKSLLATSL 622
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 137 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 196
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 197 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 256
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 257 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 314
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 315 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 374
Query: 510 VALRE 514
ALRE
Sbjct: 375 YALRE 379
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 155 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 214
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 215 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 270
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 271 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 326
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 327 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 378
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 191 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 251 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 309 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Query: 510 VALRE 514
ALRE
Sbjct: 369 YALRE 373
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 149 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 264
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 191 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 251 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 309 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Query: 510 VALRE 514
ALRE
Sbjct: 369 YALRE 373
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 149 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 264
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 191 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 251 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 309 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Query: 510 VALRE 514
ALRE
Sbjct: 369 YALRE 373
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 149 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 264
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 191 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 251 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 309 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Query: 510 VALRE 514
ALRE
Sbjct: 369 YALRE 373
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 149 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 264
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 139 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 198
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 199 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 258
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 259 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 316
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 317 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 376
Query: 510 VALRE 514
ALRE
Sbjct: 377 YALRE 381
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 157 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 216
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 217 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 272
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 273 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 328
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 329 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 380
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 191 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 251 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 309 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Query: 510 VALRE 514
ALRE
Sbjct: 369 YALRE 373
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 149 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 264
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 191 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 251 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 309 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Query: 510 VALRE 514
ALRE
Sbjct: 369 YALRE 373
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 149 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 264
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 131 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYG 190
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 191 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250
Query: 392 ADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ R GGS S +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 251 IDSIGSSRLEGGSGGDSEV--QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 308
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+
Sbjct: 309 GRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Query: 510 VALRE 514
ALRE
Sbjct: 369 YALRE 373
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 149 EMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 209 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRLEGGSG 264
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +D AL R GR D
Sbjct: 265 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 96/243 (39%), Positives = 141/243 (58%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 126 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYG 185
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 186 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 245
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G++ G S V +R + LL ++DG E K I V+ ATNR +D+AL+RPGR
Sbjct: 246 IDSIGSRLEGGSGGDSEV-QRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGR 304
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PPP+ EAR +IL++H+R M + ++LR IAE +GAE++G+C EAG+ A
Sbjct: 305 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYA 364
Query: 512 LRE 514
LRE
Sbjct: 365 LRE 367
Score = 331 (121.6 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 74/228 (32%), Positives = 123/228 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 144 EMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 203
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + +GE + +RE F A HA PS++F+DEID++ R +
Sbjct: 204 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSRLEGGSGG 259
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + + ++ V+ +TNR+D +D AL R GR D
Sbjct: 260 DSEVQRTMLELLNQLDGFEAT-KNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 318
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 319 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 366
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 91/241 (37%), Positives = 139/241 (57%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P ++ + ++P T++ +GGL K++++ +E P+KH F LGI+ +G +L+GPP
Sbjct: 132 PLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPP 191
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G GAEL Y+GE ++R F AR APSIIF DE D
Sbjct: 192 GTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 251
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G+ R S + +R + LL ++DG E +K I ++ ATNR +D AL+RPGR D
Sbjct: 252 SIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRID 311
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ PPP + AR EILR+H+R M + ++LR +AE+ +GA+++G+C EAG+ ALR
Sbjct: 312 RKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALR 371
Query: 514 E 514
E
Sbjct: 372 E 372
Score = 347 (127.2 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 74/229 (32%), Positives = 127/229 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG ++ ++E+I P+ + + LG+ P+G++LYGPPGTGKT L RAV
Sbjct: 148 DMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTD 207
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + ++GE + +RE F A HA PS++F+DEID++ R +
Sbjct: 208 CKFIRVSGAELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSTRVEGSGG 263
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + + L++ +TS ++ ++ +TNR+D +DPAL R GR D
Sbjct: 264 GDSEVQRTMLELLNQLDGFETS-KNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVA 322
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EIL+++++K+ L ++L +A NG GAD++ +C EA M A++
Sbjct: 323 ARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALR 371
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 461 (167.3 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 140/481 (29%), Positives = 234/481 (48%)
Query: 43 SQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHV-GESEKAL 101
S+ K+ + +++ G G+GKT+ ++ + R + +V V A + G S +
Sbjct: 491 SELDKVCCGGKQHVMVLGGNGSGKTTFIKKLARRLSHNSSVTFCKMVPCALLKGRSADII 550
Query: 102 REAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVP 161
+ S KPS +F+D+ D + P+ D +EQ +A + + + K T V
Sbjct: 551 EKLLSDTLHEMEVKKPSCLFLDDFDVILPQID--QEQR-HLAMEKVVSVFAQKLRTTEVS 607
Query: 162 HVVVVASTNRVDA--IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLE 219
V+V + ++ ++ +R R EI + + +P ++++ E
Sbjct: 608 VVLVAQRLSSLNDGFVEQVMRARPIVSRKIELEQLTKEDRCEIFETFLD-LPENSDIISE 666
Query: 220 AIATSCNGYVGADLEALCREATMSAVKRSSDANECA--GVLSVT-MEDWRHARSVVGPSI 276
+ S +GY +++E L + ECA GV +T +E + V +
Sbjct: 667 IVKKS-DGYTFSEIEKLAVSINV----------ECAIKGVKYITEIEVEKAFECFVAGKM 715
Query: 277 TRGVTVEIPKV--TWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPG 334
+ +E +V T ED+GG+ + KK L+Q + WP K+ F +G+ +G LLHGP G
Sbjct: 716 GK---IEDGQVLPTMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSG 772
Query: 335 CXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADV 394
C G EL S Y+G SE +R F++AR AP I+FFDE D
Sbjct: 773 CGKTLLANATISNSNFSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDS 832
Query: 395 VGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA-KGILVLAATNRPHAIDAALMRPGRFD 453
+ KRG ST +T +R+++ LLTE+DG E KG+++L T+R ID AL+RPGRFD
Sbjct: 833 LAPKRG-HDSTGVT--DRVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFD 889
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+Y P+ R +I++V T +K DVD +A++T+ ++GA+L+ L A R
Sbjct: 890 HHVYCGHPEKTERLDIMKVLTNKLKP-TDVDFECLAQKTDGWSGADLQLLFTNAQFYNAR 948
Query: 514 E 514
+
Sbjct: 949 Q 949
Score = 290 (107.1 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 75/225 (33%), Positives = 119/225 (52%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG + L ++I +P Y + +G+ +G+LL+GP G GKT L A +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 79 -AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
+ + V P + K ++G SE+ +R F +A S A P ++F DE+D+L P+R H
Sbjct: 788 FSVVNVKGPELLSK-YIGASEENVRLVFEKARSCA----PCILFFDELDSLAPKRGHDST 842
Query: 138 QDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ +QL T +D ++ + V+++ T+R+D ID AL R GRFD
Sbjct: 843 GVTDRVVNQLLTELDG---AEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEK 899
Query: 197 XXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREA 240
R +I+K+ T K+ P D VD E +A +G+ GADL+ L A
Sbjct: 900 TERLDIMKVLTNKLKPTD--VDFECLAQKTDGWSGADLQLLFTNA 942
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 415 (151.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 90/241 (37%), Positives = 134/241 (55%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+IP VTW+D+GGL ++K + + ++ P++ F++ G+ G L +GPPG
Sbjct: 989 KIPSVTWDDVGGLGNVKDAVMETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1047
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MY+GESEA +R FQRAR A P ++FFDE D V KRG
Sbjct: 1048 AIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQ 1107
Query: 403 SSTSITVGERLLSTLLTEMDGL----EQAKGILVLAATNRPHAIDAALMRPGRFDLVLYV 458
+ V +R++S LL E+DG+ + G+ V+ ATNRP +D AL+RPGRFD +LY+
Sbjct: 1108 GDSG-GVMDRIVSQLLAELDGMSSGDDSGGGVFVIGATNRPDLLDQALLRPGRFDKLLYL 1166
Query: 459 PPPDL-EARHEILRVHTRNMKVGDDVDLRSIAEETEL-FTGAELEGLCREAGIVALREDI 516
D E + I+ TR + V LR++AE+ +TGA+ LC +A + A+
Sbjct: 1167 GVSDTHEKQLTIMEALTRKFTLHPSVSLRAVAEKLPFTYTGADFYALCSDAMLKAVTRQA 1226
Query: 517 S 517
S
Sbjct: 1227 S 1227
Score = 307 (113.1 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 80/234 (34%), Positives = 115/234 (49%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG +A+ E I PL K G+K G+L YGPPGTGKT L +A+ E +
Sbjct: 998 VGGLGNVKDAVMETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLN 1056
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + ++GESE +R F +A +P VVF DE+D++ P+R ++ +
Sbjct: 1057 FFSVKGPELLNMYIGESEANVRRVFQRARD----ARPCVVFFDELDSVAPKRGNQGDSGG 1112
Query: 141 ---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
RI SQL +D S V V+ +TNR D +D AL R GRFD
Sbjct: 1113 VMDRIVSQLLAELDGMSSGDDSGGGVFVIGATNRPDLLDQALLRPGRFDKLLYLGVSDTH 1172
Query: 198 XR-FEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSAVKRSS 249
+ I++ T+K L +V L A+A Y GAD ALC +A + AV R +
Sbjct: 1173 EKQLTIMEALTRKFTLHPSVSLRAVAEKLPFTYTGADFYALCSDAMLKAVTRQA 1226
Score = 78 (32.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 62/265 (23%), Positives = 100/265 (37%)
Query: 28 VEALRELITFPLLYSSQAQKLGLKWPR-GLLLYGPP-GTGKTSLVRAVVRECGAHLTVIS 85
+ ALR + L ++ + + LK P +LL GK +L R+ G H I+
Sbjct: 724 ISALRRRMRSLLAAATSKRAIHLKAPAVAILLVSTQRNIGKATLATDTCRDIGLHTFTIN 783
Query: 86 PHSV-HKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIAS 144
+ + ++ G S+ + ALS P E AL R D R+A+
Sbjct: 784 AYDILNEGGGGGSDVKTDGTLKARAERALSCGP------EFCALLIRHIEALTAD-RMAT 836
Query: 145 QLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILK 204
L +++ + V++A+T D I +R G F R IL+
Sbjct: 837 SLRSILSDAR---------VLIATTTEPDKIPDGVR--GLFTHELEMTAPDEGEREGILR 885
Query: 205 LYTKK--VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL---- 258
+ + LD VDL +A V DL + A ++ R E A
Sbjct: 886 SIVDQRGINLDPGVDLGGVALKTAALVAGDLVDVIDRAIVAQRSRLESLAEKASQSRQGN 945
Query: 259 --SVTMEDWRHARSVVGPSITRGVT 281
+VT+ D + V G + RG+T
Sbjct: 946 QPAVTLRDVQ----VAGGTAVRGLT 966
Score = 52 (23.4 bits), Expect = 7.7e-40, Sum P(2) = 7.7e-40
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLK---WPRGLLLYGPPG 63
+ ++ + +E + G+ A VE + F + G+K WP L L PP
Sbjct: 649 VQTQKQDAADQDEDLWGSAACVETT--MAHFESSGMVNGRVPGVKDSNWPYYLGLVTPPN 706
Query: 64 TGKTSLVRAVVRECGAHLTVI 84
G SL A+ H++ +
Sbjct: 707 PGSDSLPVAICEPAPKHISAL 727
Score = 50 (22.7 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 26 AAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVIS 85
AAV A L T +++S L L P + + PP GK +L V + G ++S
Sbjct: 184 AAVRAA--LGTLRVVHSGDLFPLPL--PPHPITHVPPNPGKVTLCEPVAQ--G----ILS 233
Query: 86 PHSVHKAHVGESE-KALREAFSQASSHALSG 115
P++ G S K R+ S+ SS L G
Sbjct: 234 PNTKIIVSSGRSPLKGNRDRGSRQSSRMLDG 264
Score = 44 (20.5 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 260 VTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
VT ED A + PS++ G +V GG RD +++ QQ
Sbjct: 1263 VTEEDLLAAHEEMIPSVSAGELAHYERVRATFEGG-RDKQQQQQQ 1306
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 94/243 (38%), Positives = 141/243 (58%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E +GGL +++++ +E P+KH F LGI+ +G LL+G
Sbjct: 125 VDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYG 184
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 185 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 244
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G+ R + + V +R + LL ++DG E K I V+ ATNR +D AL+RPGR
Sbjct: 245 IDSIGSARLETGTGDSEV-QRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGR 303
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PPP+ EAR +IL++H+R M + ++LR IAEE +GAE++G+C EAG+ A
Sbjct: 304 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYA 363
Query: 512 LRE 514
LRE
Sbjct: 364 LRE 366
Score = 329 (120.9 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 80/254 (31%), Positives = 130/254 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 143 EMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTE 202
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 203 CTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARLETGTG 258
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + + ++ V+ +TNR+D +D AL R GR D
Sbjct: 259 DSEVQRTMLELLNQLDGFEAT-KNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEA 317
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++ +
Sbjct: 318 RLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERR--------V 369
Query: 259 SVTMEDWRHARSVV 272
VT ED+ A S V
Sbjct: 370 HVTQEDFEMAVSKV 383
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 90/243 (37%), Positives = 141/243 (58%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T++ +GGL K++++ +E P+KH F LGI+ +G +L+G
Sbjct: 126 VDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYG 185
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+GE ++R F AR APSIIF DE
Sbjct: 186 PPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 245
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G+ R SS + +R + LL ++DG E +K I ++ ATNR +D AL+RPGR
Sbjct: 246 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGR 305
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + P P + AR +IL++H+R+M + ++LR IAE+ +GA+++G+C EAG+ A
Sbjct: 306 IDRKIEFPAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYA 365
Query: 512 LRE 514
LRE
Sbjct: 366 LRE 368
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 73/229 (31%), Positives = 125/229 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG ++ ++E+I P+ + + LG+ P+G++LYGPPGTGKT L RAV
Sbjct: 144 DMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTE 203
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + ++GE + +RE F A HA PS++F+DEID++ R +
Sbjct: 204 CKFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRVEGSSG 259
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + + L++ ++S + ++ +TNR+D +DPAL R GR D
Sbjct: 260 GDSEVQRTMLELLNQLDGFESS-KDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVA 318
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++ + L ++L IA NG GAD++ +C EA M A++
Sbjct: 319 ARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALR 367
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 419 (152.6 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 104/324 (32%), Positives = 171/324 (52%)
Query: 212 LDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS-SDANECAGVLSVTMEDWRHARS 270
L +VD +A +G++ DL L A A+ RS S+A++ + + + D+ +A
Sbjct: 771 LGRDVDFLDLAGKTDGFMPGDLVLLVARARNEALIRSISEASDESRAIILGAADFDNAIK 830
Query: 271 VVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLH 330
P+ R VT+ T+ IGGL + +K L + +++P K++ F++ + G LL+
Sbjct: 831 GFTPASLRNVTLTSSTTTFSAIGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLY 890
Query: 331 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFD 390
G PGC G E+ + Y+G SE +R+ F+RA+ A P I+FFD
Sbjct: 891 GYPGCGKTMLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERAQAARPCILFFD 950
Query: 391 EADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPG 450
E D + KRG ST +T +R+++ LLT+MDG E G+ VLAAT+RP ID AL+RPG
Sbjct: 951 EFDSIAPKRG-HDSTGVT--DRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPG 1007
Query: 451 RFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLR--SIAEETELFTGAELEGLCREAG 508
R D L P+ R +I+R ++ + + ++V R +A T F+GA+L+ + A
Sbjct: 1008 RLDKSLLCDMPNHADRADIIRAVSKKLAMSNEVVARIDEVAARTAGFSGADLQAVVYNAH 1067
Query: 509 IVALREDISATAVRNRHFQTVKDS 532
+ A+ + + + +T K S
Sbjct: 1068 LEAVHDALGDRSGDKPPAKTAKSS 1091
Score = 314 (115.6 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 80/230 (34%), Positives = 124/230 (53%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
AIGG + L E + +P Y+ + L+ GLLLYG PG GKT L AV ECG
Sbjct: 851 AIGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTMLASAVAGECGL 910
Query: 80 H-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+ ++V P ++K ++G SEK++R+ F +A + +P ++F DE D++ P+R H
Sbjct: 911 NFISVKGPEILNK-YIGASEKSVRDLFERAQA----ARPCILFFDEFDSIAPKRGHDSTG 965
Query: 139 DV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
R+ +QL T MD + + V V+A+T+R D IDPAL R GR D
Sbjct: 966 VTDRVVNQLLTQMDGAE----GLSGVYVLAATSRPDLIDPALLRPGRLDKSLLCDMPNHA 1021
Query: 198 XRFEILKLYTKKVPLDANV--DLEAIATSCNGYVGADLEALCREATMSAV 245
R +I++ +KK+ + V ++ +A G+ GADL+A+ A + AV
Sbjct: 1022 DRADIIRAVSKKLAMSNEVVARIDEVAARTAGFSGADLQAVVYNAHLEAV 1071
Score = 65 (27.9 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAH-LTVISPHSVHKAHVGES-----EKALREAFSQAS 109
+L+ G G+GKT+L + + L + S K E+ ++ L F A+
Sbjct: 558 VLVTGGLGSGKTALGQLLAHRLQKESLFNVKYFSCRKLVTDETRISNIKETLNRLFMSAA 617
Query: 110 SHALSGKPSVVFIDEIDALCP 130
A G S V +D++D LCP
Sbjct: 618 WCARLGGQSTVILDDLDKLCP 638
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 97/247 (39%), Positives = 139/247 (56%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P + ++P T++ IGGL K++++ +E PIKH F LGI+ +G LL
Sbjct: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
Query: 390 DEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALM 447
DE D +G+ R GS + V +R + LL ++DG E + I VL ATNR +D AL+
Sbjct: 261 DEIDSIGSARMESGSGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALL 319
Query: 448 RPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREA 507
RPGR D + P P+ E+R +IL++H+R M + +DL+ IAE+ +GAEL+ +C EA
Sbjct: 320 RPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 379
Query: 508 GIVALRE 514
G+ ALRE
Sbjct: 380 GMFALRE 386
Score = 348 (127.6 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 79/230 (34%), Positives = 126/230 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHRR 136
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 221 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSG 276
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
D + + L++ + S + V+ +TNR+D +D AL R GR D
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
RF+ILK++++K+ L +DL+ IA NG GA+L+A+C EA M A++
Sbjct: 336 ESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 97/247 (39%), Positives = 139/247 (56%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P + ++P T++ IGGL K++++ +E PIKH F LGI+ +G LL
Sbjct: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
Query: 390 DEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALM 447
DE D +G+ R GS + V +R + LL ++DG E + I VL ATNR +D AL+
Sbjct: 261 DEIDSIGSARMESGSGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALL 319
Query: 448 RPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREA 507
RPGR D + P P+ E+R +IL++H+R M + +DL+ IAE+ +GAEL+ +C EA
Sbjct: 320 RPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 379
Query: 508 GIVALRE 514
G+ ALRE
Sbjct: 380 GMFALRE 386
Score = 348 (127.6 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 79/230 (34%), Positives = 126/230 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHRR 136
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 221 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSG 276
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
D + + L++ + S + V+ +TNR+D +D AL R GR D
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
RF+ILK++++K+ L +DL+ IA NG GA+L+A+C EA M A++
Sbjct: 336 ESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 94/244 (38%), Positives = 133/244 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F +LG+ P +G LL+GPPG
Sbjct: 164 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMAR 223
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ FQ A+ AP IIF DE D +G KR S
Sbjct: 224 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS 283
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ +R + LL ++DG + I V+AATNR +D ALMR GR D + P P
Sbjct: 284 EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 343
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
EAR IL++H+R M V DV+ +A T+ F GA+L+ +C EAG++ALR D AT V
Sbjct: 344 EEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD--ATEVN 401
Query: 523 NRHF 526
+ F
Sbjct: 402 HEDF 405
Score = 356 (130.4 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 87/254 (34%), Positives = 139/254 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + IGG ++ L E I P+ + + +KLG++ P+G+LLYGP
Sbjct: 154 DSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGP 213
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RA + A L + P V + +G+ K +R+AF A A P ++
Sbjct: 214 PGTGKTLMARACAAQTNATFLKLAGPQLV-QMFIGDGAKLVRDAFQLAKEKA----PCII 268
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDEIDA+ +R D D + + L++ +S + V+A+TNR D +DPAL
Sbjct: 269 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ-LDGFSSDERIKVIAATNRADILDPAL 327
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R IL+++++K+ + +V+ E +A S + + GA L+A+C E
Sbjct: 328 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE 387
Query: 240 ATMSAVKRSSDANE 253
A M A++R DA E
Sbjct: 388 AGMLALRR--DATE 399
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 439 (159.6 bits), Expect = 2.9e-41, P = 2.9e-41
Identities = 98/261 (37%), Positives = 146/261 (55%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + +T + +VT++D+ G+ + K++L++ VE+ +++ FSRLG +GALL GP
Sbjct: 139 GKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG RG E+ L+ LL EMDG E +G+++LAATNR +D AL+RPGRF
Sbjct: 258 DAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRF 317
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + V PD++ R +IL VH R +G DVDLR IA T F+GA+L L EA ++A
Sbjct: 318 DRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAA 377
Query: 513 REDISATAVRNRHFQTVKDSL 533
R + V F+ KD +
Sbjct: 378 R--VGRRFVTMEDFENAKDKV 396
Score = 344 (126.2 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 99/278 (35%), Positives = 143/278 (51%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK ++++E + + ++ G + A E L E++ F L + +LG K P+G LL GP
Sbjct: 140 KSKAKMLTEKHGRVTFDDVAGIDEAK-EELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E G IS + VG +R+ F QA +A P +VF
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNA----PCIVF 253
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ R + REQ + +QL MD + ++ V+++A+TNR D
Sbjct: 254 IDEIDAVGRHRGAGYGGGNDEREQTL---NQLLVEMDGFEANEG----VIILAATNRKDV 306
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +IL ++ +K PL +VDL IA G+ GADL
Sbjct: 307 LDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLA 366
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + G VTMED+ +A+ V
Sbjct: 367 NLVNEAALMAAR--------VGRRFVTMEDFENAKDKV 396
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 439 (159.6 bits), Expect = 2.9e-41, P = 2.9e-41
Identities = 98/261 (37%), Positives = 146/261 (55%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + +T + +VT++D+ G+ + K++L++ VE+ +++ FSRLG +GALL GP
Sbjct: 139 GKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG RG E+ L+ LL EMDG E +G+++LAATNR +D AL+RPGRF
Sbjct: 258 DAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRF 317
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + V PD++ R +IL VH R +G DVDLR IA T F+GA+L L EA ++A
Sbjct: 318 DRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAA 377
Query: 513 REDISATAVRNRHFQTVKDSL 533
R + V F+ KD +
Sbjct: 378 R--VGRRFVTMEDFENAKDKV 396
Score = 344 (126.2 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 99/278 (35%), Positives = 143/278 (51%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK ++++E + + ++ G + A E L E++ F L + +LG K P+G LL GP
Sbjct: 140 KSKAKMLTEKHGRVTFDDVAGIDEAK-EELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E G IS + VG +R+ F QA +A P +VF
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNA----PCIVF 253
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ R + REQ + +QL MD + ++ V+++A+TNR D
Sbjct: 254 IDEIDAVGRHRGAGYGGGNDEREQTL---NQLLVEMDGFEANEG----VIILAATNRKDV 306
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +IL ++ +K PL +VDL IA G+ GADL
Sbjct: 307 LDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLA 366
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + G VTMED+ +A+ V
Sbjct: 367 NLVNEAALMAAR--------VGRRFVTMEDFENAKDKV 396
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 423 (154.0 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 89/236 (37%), Positives = 133/236 (56%)
Query: 283 EIPK--VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXX 340
E+P+ VT+ D+ G K +LQ+ V++ +K+ ++ LG +G LL GPPG
Sbjct: 241 EVPETGVTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 299
Query: 341 XXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRG 400
+E ++VG + +R+ F++A+ AP I+F DE D VG +RG
Sbjct: 300 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRG 359
Query: 401 GSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP 460
E+ ++ LLTEMDG G++VLAATNRP +D+AL+RPGRFD + V
Sbjct: 360 AGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 419
Query: 461 PDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDI 516
PD+ R +IL+VH+R +G DVD +A T FTGA+L+ L EA I+A R ++
Sbjct: 420 PDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARREL 475
Score = 310 (114.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 97/285 (34%), Positives = 141/285 (49%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ G ++A +E L+E++ F L + LG K P+G LL GPPGTGKT L RAV E G
Sbjct: 251 DVAGADQAKLE-LQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAG 308
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR------ 132
+ + VG +R+ F +A S A P +VFIDEIDA+ +R
Sbjct: 309 VPFFSCAASEFVELFVGVGASRVRDLFEKAKSKA----PCIVFIDEIDAVGRQRGAGMGG 364
Query: 133 -DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
+ REQ + +QL T MD + V+V+A+TNR D +D AL R GRFD
Sbjct: 365 GNDEREQTI---NQLLTEMDGFSGNSG----VIVLAATNRPDVLDSALLRPGRFDRQVTV 417
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R +ILK++++ + +VD E +A G+ GADL+ L EA + A +R +
Sbjct: 418 DRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARR--EL 475
Query: 252 NECA-GVLSVTMEDWRHARSVVGPSITRGVTVEIPK--VTWEDIG 293
E + +S +E R + GP V E K V + + G
Sbjct: 476 KEISKDEISDALE-----RIIAGPEKKNAVVSEEKKRLVAYHEAG 515
Score = 41 (19.5 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 94 VGESEKALREAFSQASSHAL---SGKPSVVFIDE 124
+ +SEK ++ SQA+ AL S P + ++E
Sbjct: 46 ISQSEKLMKSLPSQAALAALLFSSSSPQALAVNE 79
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 409 (149.0 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 86/260 (33%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ I T M + ++VDL + +GA++ +C+E+G++A+RE NR
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE--------NR 391
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 392 YIVLAKDFEKAYKTVIKKDE 411
Score = 311 (114.5 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/230 (33%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 227 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 281
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL R GR D
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I T K+ L VDLE + GAD+ ++C+E+ M AV+ +
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Score = 43 (20.2 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
G+L ++D A SV P G++ P+ ED+ L KKLQQ +E+
Sbjct: 5 GILVEKIQDEIPALSVSRPQT--GLSFLGPEP--EDLEDLYSRYKKLQQELEF 53
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 409 (149.0 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 86/260 (33%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ I T M + ++VDL + +GA++ +C+E+G++A+RE NR
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE--------NR 391
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 392 YIVLAKDFEKAYKTVIKKDE 411
Score = 311 (114.5 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/230 (33%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 227 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 281
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL R GR D
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I T K+ L VDLE + GAD+ ++C+E+ M AV+ +
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Score = 43 (20.2 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
G+L ++D A SV P G++ P+ ED+ L KKLQQ +E+
Sbjct: 5 GILVEKIQDEIPALSVSRPQT--GLSFLGPEP--EDLEDLYSRYKKLQQELEF 53
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 92/245 (37%), Positives = 136/245 (55%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ ++P T+E +GGL K++++ +E P+KH F LGIS +G LL
Sbjct: 159 SKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLL 218
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 219 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 278
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
DE D +G++R V +R + LL ++DG E + I V+ TNR +D AL+RP
Sbjct: 279 DEIDSIGSQRIEGEHGDSEV-QRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRP 337
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + P P++EAR EIL++H+R M + +D+ IA + +GAE++ +C EAG+
Sbjct: 338 GRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGM 397
Query: 510 VALRE 514
ALRE
Sbjct: 398 FALRE 402
Score = 353 (129.3 bits), Expect = 6.3e-32, P = 6.3e-32
Identities = 78/228 (34%), Positives = 125/228 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG V+ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 179 EMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTD 238
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + ++GE + +RE F A HA PS++F+DEID++ +R
Sbjct: 239 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSQRIEGEHG 294
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + S ++ V+ TNR+D +D AL R GR D
Sbjct: 295 DSEVQRTMMELLNQLDGFE-STQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEA 353
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EILK++++K+ L +D+ IAT N GA+++A+C EA M A++
Sbjct: 354 RMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALR 401
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 92/245 (37%), Positives = 136/245 (55%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ ++P T+E +GGL K++++ +E P+KH F LGIS +G LL
Sbjct: 159 SKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLL 218
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 219 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 278
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
DE D +G++R V +R + LL ++DG E + I V+ TNR +D AL+RP
Sbjct: 279 DEIDSIGSQRIEGEHGDSEV-QRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRP 337
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + P P++EAR EIL++H+R M + +D+ IA + +GAE++ +C EAG+
Sbjct: 338 GRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGM 397
Query: 510 VALRE 514
ALRE
Sbjct: 398 FALRE 402
Score = 353 (129.3 bits), Expect = 6.3e-32, P = 6.3e-32
Identities = 78/228 (34%), Positives = 125/228 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG V+ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 179 EMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTD 238
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + ++GE + +RE F A HA PS++F+DEID++ +R
Sbjct: 239 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSQRIEGEHG 294
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + S ++ V+ TNR+D +D AL R GR D
Sbjct: 295 DSEVQRTMMELLNQLDGFE-STQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEA 353
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EILK++++K+ L +D+ IAT N GA+++A+C EA M A++
Sbjct: 354 RMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALR 401
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 91/243 (37%), Positives = 137/243 (56%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E +GGL K++++ +E P+KH F LGI+ +G LL G
Sbjct: 141 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFG 200
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 201 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 260
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G+ R SS + +R + LL ++DG E K I V+ ATNR +D AL+RPGR
Sbjct: 261 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 320
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + P PD +AR +IL++H+R M + +++ IAE+ +GAE++ +C EAG+ A
Sbjct: 321 IDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFA 380
Query: 512 LRE 514
LRE
Sbjct: 381 LRE 383
Score = 321 (118.1 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 75/232 (32%), Positives = 126/232 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + LG+ P+G+LL+GPPGTGKT L RAV
Sbjct: 159 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTE 218
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR---DHR 135
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 219 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRVEGSSG 274
Query: 136 REQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +DPAL R GR D
Sbjct: 275 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDPALLRPGRIDRKIEFPAP 330
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L +++ IA G GA+++++C EA M A++
Sbjct: 331 DEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALR 382
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 444 (161.4 bits), Expect = 8.0e-41, P = 8.0e-41
Identities = 130/474 (27%), Positives = 212/474 (44%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVH----KAHVGES-EKALREAFSQASS 110
+LL G GTGKT LV ++ + H K ES +K LR F+
Sbjct: 480 VLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQ 539
Query: 111 HALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTN 170
HA P++V ++ +D L + QD +++ + T+ + V+A+ N
Sbjct: 540 HA----PAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLIVQYTTNNAIAVIATVN 595
Query: 171 RVDAIDPALRRS-GR--FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNG 227
+ ++ L GR F R IL+ + + ++DL + G
Sbjct: 596 ELQTLNKRLSSPRGRHVFQTVARLPNLERADREIILRELCSHINVAKDLDLVKFSNLTEG 655
Query: 228 YVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITR----GVTVE 283
Y DL A A + S +E H S I G +
Sbjct: 656 YRKCDLVQFVERAIFYAYRISKTQPLLTN--DQLIESLEHTNSYCLQGIQSNQRTGNDAD 713
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
++ E++ GL + L++ + WP ++ T F+ + G LL+GPPG
Sbjct: 714 ANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQ 773
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G EL + Y+G+SE +RN F RAR A P ++FFDE D + KRG
Sbjct: 774 LATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRG-HD 832
Query: 404 STSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDL 463
ST +T +R+++ LLTE+DG+E +G+ V+AAT+RP +D AL+R GR D ++ P PD
Sbjct: 833 STGVT--DRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPDA 890
Query: 464 EARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDIS 517
AR I + + + + VD A +T +TGA+++ + A + A++E ++
Sbjct: 891 PARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALA 944
Score = 299 (110.3 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 80/242 (33%), Positives = 126/242 (52%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
++ NE + EE + G + V L E++ +P Y + L+ G+LLYGPPGTGKT
Sbjct: 712 ADANEM-RVEE-LPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTY 769
Query: 69 LVRAVVRECGAHL-TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
LV + + +V P + K ++G+SE+ +R F++A S +P V+F DE D+
Sbjct: 770 LVSQLATSWNLRIISVKGPELLAK-YIGQSEENVRNLFNRARS----ARPCVLFFDEFDS 824
Query: 128 LCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
L P+R H R+ +QL T +D + + V V+A+T+R + +DPAL RSGR D
Sbjct: 825 LAPKRGHDSTGVTDRVVNQLLTELDGVE----GLQGVTVIAATSRPELLDPALLRSGRID 880
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I + + + LD VD + A Y GAD++++ A M+AVK
Sbjct: 881 RLVECPLPDAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVK 940
Query: 247 RS 248
+
Sbjct: 941 EA 942
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 409 (149.0 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 86/260 (33%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ I T M + ++VDL + +GA++ +C+E+G++A+RE NR
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE--------NR 391
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 392 YIVLAKDFEKAYKTVIKKDE 411
Score = 311 (114.5 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/230 (33%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 227 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 281
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL R GR D
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I T K+ L VDLE + GAD+ ++C+E+ M AV+ +
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Score = 41 (19.5 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
G+L +D A SV P G++ P+ ED+ L KKLQQ +E+
Sbjct: 5 GILVEKAQDEIPALSVSRPQT--GLSFLGPEP--EDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 409 (149.0 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 86/260 (33%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ I T M + ++VDL + +GA++ +C+E+G++A+RE NR
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE--------NR 391
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 392 YIVLAKDFEKAYKTVIKKDE 411
Score = 311 (114.5 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/230 (33%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 227 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 281
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL R GR D
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I T K+ L VDLE + GAD+ ++C+E+ M AV+ +
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Score = 41 (19.5 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
G+L +D A SV P G++ P+ ED+ L KKLQQ +E+
Sbjct: 5 GILVEKAQDEIPALSVSRPQT--GLSFLGPEP--EDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 409 (149.0 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 86/260 (33%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ I T M + ++VDL + +GA++ +C+E+G++A+RE NR
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE--------NR 391
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 392 YIVLAKDFEKAYKTVIKKDE 411
Score = 311 (114.5 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/230 (33%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 227 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 281
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL R GR D
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I T K+ L VDLE + GAD+ ++C+E+ M AV+ +
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Score = 41 (19.5 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
G+L +D A SV P G++ P+ ED+ L KKLQQ +E+
Sbjct: 5 GILVEKAQDEIPALSVSRPQT--GLSFLGPEP--EDLEDLYSRYKKLQQELEF 53
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 409 (149.0 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 86/260 (33%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ I T M + ++VDL + +GA++ +C+E+G++A+RE NR
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE--------NR 391
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 392 YIVLAKDFEKAYKTVIKKDE 411
Score = 311 (114.5 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/230 (33%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 227 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 281
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL R GR D
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I T K+ L VDLE + GAD+ ++C+E+ M AV+ +
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 390
Score = 41 (19.5 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
G+L +D A SV P G++ P+ ED+ L KKLQQ +E+
Sbjct: 5 GILVEKAQDEIPALSVSRPQT--GLSFLGPEP--EDLEDLYSRYKKLQQELEF 53
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 88/245 (35%), Positives = 134/245 (54%)
Query: 282 VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
+E P + DIGGL + L +A+ P+ H F ++GI P +G L+HGPPG
Sbjct: 178 IEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLA 237
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
G +L M++G+ ++R+ F A+ AP+IIF DE D +G KR
Sbjct: 238 RACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPP 461
S + +R + LL ++DG + V+AATNRP +D AL+R GR D + +P P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 462 DLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAV 521
+ E+R IL++H+R M V DV+ +A T+ F GA+L+ +C EAG++ALR AT +
Sbjct: 358 NEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRR--GATEI 415
Query: 522 RNRHF 526
+ F
Sbjct: 416 DHEDF 420
Score = 353 (129.3 bits), Expect = 6.3e-32, P = 6.3e-32
Identities = 83/231 (35%), Positives = 132/231 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG +E L E I P+L+ + +K+G+K P+G+L++GPPGTGKT L RA + A
Sbjct: 188 IGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNAT 247
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L + P V + +G+ K +R+AF+ A A P+++FIDE+DA+ +R D
Sbjct: 248 FLKLAGPQLV-QMFIGDGAKMVRDAFNLAKEKA----PAIIFIDELDAIGTKRFDSELSG 302
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ T V V+A+TNR D +DPAL RSGR D
Sbjct: 303 DREVQRTMLELLNQLDGFSTD-DTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEES 361
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
R IL+++++K+ + +V+ E +A S + + GA L+A+C EA M A++R +
Sbjct: 362 RARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 88/245 (35%), Positives = 134/245 (54%)
Query: 282 VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
+E P + DIGGL + L +A+ P+ H F ++GI P +G L+HGPPG
Sbjct: 178 IEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLA 237
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
G +L M++G+ ++R+ F A+ AP+IIF DE D +G KR
Sbjct: 238 RACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPP 461
S + +R + LL ++DG + V+AATNRP +D AL+R GR D + +P P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 462 DLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAV 521
+ E+R IL++H+R M V DV+ +A T+ F GA+L+ +C EAG++ALR AT +
Sbjct: 358 NEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRR--GATEI 415
Query: 522 RNRHF 526
+ F
Sbjct: 416 DHEDF 420
Score = 353 (129.3 bits), Expect = 6.3e-32, P = 6.3e-32
Identities = 83/231 (35%), Positives = 132/231 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG +E L E I P+L+ + +K+G+K P+G+L++GPPGTGKT L RA + A
Sbjct: 188 IGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNAT 247
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L + P V + +G+ K +R+AF+ A A P+++FIDE+DA+ +R D
Sbjct: 248 FLKLAGPQLV-QMFIGDGAKMVRDAFNLAKEKA----PAIIFIDELDAIGTKRFDSELSG 302
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ T V V+A+TNR D +DPAL RSGR D
Sbjct: 303 DREVQRTMLELLNQLDGFSTD-DTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEES 361
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
R IL+++++K+ + +V+ E +A S + + GA L+A+C EA M A++R +
Sbjct: 362 RARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 91/245 (37%), Positives = 138/245 (56%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ + ++P T+E +GGL K++++ +E P+KH F LGI+ +G LL
Sbjct: 155 SKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 214
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL ++GE ++R F AR APSIIF
Sbjct: 215 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFM 274
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
DE D +G+ R S + +R + LL ++DG E K I V+ ATNR +D+AL+RP
Sbjct: 275 DEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRP 334
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + P PD +AR +IL++H+R M + + + IAE+ +GAE++ +C EAG+
Sbjct: 335 GRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGM 394
Query: 510 VALRE 514
ALRE
Sbjct: 395 FALRE 399
Score = 323 (118.8 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/229 (31%), Positives = 124/229 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 175 EMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 234
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + +GE + +RE F A HA PS++F+DEID++ R + R
Sbjct: 235 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRVEGSRG 290
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + + L++ + + ++ V+ +TNR+D +D AL R GR D
Sbjct: 291 GDSEVQRTMLELLNQLDGFEAT-KNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEK 349
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L + ++ IA G GA+++++C EA M A++
Sbjct: 350 ARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALR 398
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 409 (149.0 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 86/260 (33%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 159 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 218
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 219 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 278
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 279 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 338
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ I T M + ++VDL + +GA++ +C+E+G++A+RE NR
Sbjct: 339 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE--------NR 390
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 391 YIVLAKDFEKAYKTVIKKDE 410
Score = 311 (114.5 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/230 (33%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 166 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 225
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 226 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 280
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL R GR D
Sbjct: 281 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 339
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I T K+ L VDLE + GAD+ ++C+E+ M AV+ +
Sbjct: 340 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVREN 389
Score = 38 (18.4 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 290 EDIGGLRDLKKKLQQAVEW 308
ED+ L KKLQQ +E+
Sbjct: 34 EDLEDLYSRYKKLQQELEF 52
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 100/306 (32%), Positives = 158/306 (51%)
Query: 212 LDANVDLEAIATSCNGYVGADLEALCREATM--SAVKRSSDANECAGVLSVTMEDWRHAR 269
+D N + A T N YV L + RE S+V +N C ++ + +
Sbjct: 83 VDENNGIVASTTGSNYYVRV-LSTIDREQLKPSSSVGLHKQSN-C--LVDLVPPEADSTI 138
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S++ P E P +++ DIGGL K+++++AVE P+ H+ + ++GI P RG LL
Sbjct: 139 SMLSPD-------EKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLL 191
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
GPPGC G+E Y+GE ++R+ F+ A+ +PSIIF
Sbjct: 192 FGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFI 251
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
DE D + KR + + + +R+L LL +MDG ++ I V+ ATNR +D AL+RP
Sbjct: 252 DEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRP 311
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + +P PD + + T M VG+DVDL I + + A++ +C+EAG+
Sbjct: 312 GRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGM 371
Query: 510 VALRED 515
A+RE+
Sbjct: 372 HAVREN 377
Score = 305 (112.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 75/230 (32%), Positives = 120/230 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + +RE + PL ++ +++G+ PRG+LL+GPPG GKT L +AV A
Sbjct: 154 IGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTAS 213
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A ++ PS++FIDEIDA+ +R D +
Sbjct: 214 FIRVVGSEFVQK-YLGEGPRMVRDLFRLAKQNS----PSIIFIDEIDAIATKRFDAQTGA 268
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ ++ V+ +TNR D +DPAL R GR D
Sbjct: 269 DREVQRILLELLNQ-MDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQ 327
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ + T K+ + +VDLE I + AD+ A+C+EA M AV+ +
Sbjct: 328 KRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVREN 377
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 404 (147.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 85/260 (32%), Positives = 137/260 (52%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P V + DIGG+ K+++++AVE P+ H + ++GI P RG L++GPPGC
Sbjct: 160 PDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+E Y+GE ++R+ F+ A+ AP+IIF DE D + KR + +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+ +R+L LL +MDG +Q + V+ ATNR +D AL+ PGR D + P PD
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRR 339
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVRNR 524
+ + T M + ++VDL + +GA++ +C+EAG++A+RE NR
Sbjct: 340 QKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRE--------NR 391
Query: 525 HFQTVKD---SLKPALTKEE 541
+ KD + K + K+E
Sbjct: 392 YIVLAKDFEKAYKTVIKKDE 411
Score = 305 (112.4 bits), Expect = 5.8e-26, P = 5.8e-26
Identities = 76/230 (33%), Positives = 119/230 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG + +RE + PL + +++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 167 IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A +A P+++FIDEIDA+ +R D +
Sbjct: 227 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEIDAIATKRFDAQTGA 281
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ +V +V V+ +TNR D +DPAL GR D
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQ 340
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ + T K+ L VDLE + GAD+ ++C+EA M AV+ +
Sbjct: 341 KRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVREN 390
Score = 42 (19.8 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 290 EDIGGLRDLKKKLQQAVEW 308
ED+ L + KKLQQ +E+
Sbjct: 35 EDLEDLYSIYKKLQQELEF 53
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 94/261 (36%), Positives = 145/261 (55%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + +T +VT+ED+ G+ + K++L++ +++ +K F++LG +G LL GP
Sbjct: 136 GKSRAKLLTEAQGRVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGP 194
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F + + AP IIF DE
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEI 254
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG RG E+ L+ LL EMDG E +G++++AATNRP +D AL+RPGRF
Sbjct: 255 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRF 314
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + VP PD++ R IL+VHT+ + DVDL IA T F+GA+L + EA ++A
Sbjct: 315 DRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAA 374
Query: 513 REDISATAVRNRHFQTVKDSL 533
R+D S +++ F KD +
Sbjct: 375 RKDKSFVEMKD--FDDAKDKV 393
Score = 335 (123.0 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 94/253 (37%), Positives = 134/253 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ ++++E + E+ G + A E L E+I F L + KLG + P+G+LL GP
Sbjct: 137 KSRAKLLTEAQGRVTFEDVAGVDEAK-EELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGP 194
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RAV E G IS + VG +R+ F Q +A P ++F
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNA----PCIIF 250
Query: 122 IDEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ R H REQ + +QL MD + ++ V+++A+TNR D
Sbjct: 251 IDEIDAVGRHRGAGLGGGHDEREQTL---NQLLVEMDGFESNEG----VILIAATNRPDV 303
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R ILK++TKK PL ++VDL IA G+ GADL
Sbjct: 304 LDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLS 363
Query: 235 ALCREATMSAVKR 247
+ EA + A ++
Sbjct: 364 NVVNEAALLAARK 376
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 442 (160.7 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 145/511 (28%), Positives = 232/511 (45%)
Query: 29 EALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPG-TGKTSLVRAVVRECGAHLTVISPH 87
+ +R+L+ + SS+A +LG+K P +LL GK SL E G H I +
Sbjct: 760 QRVRDLMA--VATSSRAIQLGMK-PVVILLRSQQRHIGKASLATRACAEIGLHTFPIDAY 816
Query: 88 SVHK---AHVGESE-KALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIA 143
+ A+ G+ + +A +A ++ + H + + I I+ L R ++
Sbjct: 817 DILTEGGANGGDVKTEAYLKARAERAFHC-GADCTALLIKHIEVLTADRIVSAMTEILAD 875
Query: 144 SQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR-RSGRFDXXXXXXXXXXXXRFEI 202
+++ ++ +P + T+ + P + R G ++
Sbjct: 876 ARVIIATTTDVEQ---IPEAIRSMFTHEFELTAPEEKEREGILRNAVSERSIKLAPDVDL 932
Query: 203 LKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC--AG---V 257
+ K L A DL + + LE L A+ + + AG V
Sbjct: 933 GTVALKTAALVAG-DLVDVVERASVARSTRLEKLAESASKQSPTSKITVRDVLLAGGEAV 991
Query: 258 LSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAF 316
VT D+ A + + +IP V+WED+GGL ++K L + ++ P++ F
Sbjct: 992 RGVTKADFDAAVDAARKNFADSIGAPKIPNVSWEDVGGLTNVKDALVETIQLPLERPELF 1051
Query: 317 SRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTF 376
++ G+ G L +GPPG G EL +MY+GESEA +R F
Sbjct: 1052 AK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVF 1110
Query: 377 QRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL----EQAKGILV 432
QRAR A P ++FFDE D V KRG + V +R++S LL E+DG+ E + G+ V
Sbjct: 1111 QRARDARPCVVFFDELDSVAPKRGNQGDSG-GVMDRIVSQLLAELDGMNGGEENSGGVFV 1169
Query: 433 LAATNRPHAIDAALMRPGRFDLVLYVPPPDL-EARHEILRVHTRNMKVGDDVDLRSIAEE 491
+ ATNRP +D AL+RPGRFD +LY+ D E + IL TR + D+ L ++E
Sbjct: 1170 IGATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFALAPDLSLARVSER 1229
Query: 492 TEL-FTGAELEGLCREAGIVALREDISATAV 521
L +TGA+L LC +A + A+ ATAV
Sbjct: 1230 LPLTYTGADLYALCSDAMLKAITR--KATAV 1258
Score = 305 (112.4 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 82/245 (33%), Positives = 120/245 (48%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E +GG +AL E I PL K G+K G+L YGPPGTGKT L +
Sbjct: 1021 NVSW---EDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1076
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ E + + + ++GESE +R F +A +P VVF DE+D++ P+
Sbjct: 1077 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----ARPCVVFFDELDSVAPK 1132
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
R ++ + RI SQL +D + + V V+ +TNR D +D AL R GRFD
Sbjct: 1133 RGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKM 1192
Query: 189 XXXXXXXXXXR-FEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSAVK 246
+ IL+ T+K L ++ L ++ Y GADL ALC +A + A+
Sbjct: 1193 LYLGVSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCSDAMLKAIT 1252
Query: 247 RSSDA 251
R + A
Sbjct: 1253 RKATA 1257
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 93/244 (38%), Positives = 131/244 (53%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F +LGI P +G LL+GPPG
Sbjct: 163 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMAR 222
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ +P IIF DE D +G KR S
Sbjct: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS 282
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ +R + LL ++DG I V+AATNR +D ALMR GR D + P P
Sbjct: 283 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
EAR IL++H+R M V DV+ +A T+ F GA+L+ +C EAG++ALR D AT V
Sbjct: 343 EEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD--ATEVN 400
Query: 523 NRHF 526
+ F
Sbjct: 401 HEDF 404
Score = 362 (132.5 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 88/254 (34%), Positives = 141/254 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + IGG ++ L E I P+ + Q +KLG++ P+G+LLYGP
Sbjct: 153 DSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGP 212
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RA + A L + P V + +G+ K +R+AF A + P ++
Sbjct: 213 PGTGKTLMARACAAQTNATFLKLAGPQLV-QMFIGDGAKLVRDAFLLAKEKS----PCII 267
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDEIDA+ +R D D + + L++ +S + V+A+TNR D +DPAL
Sbjct: 268 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ-LDGFSSDDRIKVIAATNRADILDPAL 326
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R IL+++++K+ ++A+V+ E +A S + + GA L+A+C E
Sbjct: 327 MRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVE 386
Query: 240 ATMSAVKRSSDANE 253
A M A++R DA E
Sbjct: 387 AGMLALRR--DATE 398
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 90/242 (37%), Positives = 128/242 (52%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P VT+ D+GG ++ +KL++ VE P+ F +LGI P +G LL+G
Sbjct: 168 IDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYG 227
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR IIFFDE
Sbjct: 228 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 287
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+T++DG + I V+ ATNRP+ +D AL+RPGR
Sbjct: 288 VDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGR 347
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I R+H++ M V D+ I+ TGAEL +C EAG+ A
Sbjct: 348 IDRKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFA 407
Query: 512 LR 513
+R
Sbjct: 408 IR 409
Score = 323 (118.8 bits), Expect = 9.0e-28, P = 9.0e-28
Identities = 84/239 (35%), Positives = 127/239 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL + KLG+ P+G+LLYGPPGTGKT RAV A
Sbjct: 188 VGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDAT 247
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DE+DA+ R D
Sbjct: 248 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACIIFFDEVDAIGGARFDDGAGG 302
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L T +D P ++ V+ +TNR + +DPAL R GR D
Sbjct: 303 DNEVQRTMLELITQLDGFDPRG----NIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPD 358
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I ++++K + ++ ++ E I+ C GA+L ++C EA M A++ R ANE
Sbjct: 359 LEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANE 417
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 91/242 (37%), Positives = 129/242 (53%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P VT+ D+GG ++ ++L++ VE P+ F +LGI P +G +L+G
Sbjct: 161 IDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYG 220
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR IIFFDE
Sbjct: 221 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 280
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+T++DG + I VL ATNRP+ +D ALMRPGR
Sbjct: 281 IDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGR 340
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R ILR+H ++M + D+ IA TGAEL +C EAG+ A
Sbjct: 341 IDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFA 400
Query: 512 LR 513
+R
Sbjct: 401 IR 402
Score = 320 (117.7 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 82/231 (35%), Positives = 122/231 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL + KLG+ P+G++LYGPPGTGKT RAV A
Sbjct: 181 VGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDAT 240
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 241 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACIIFFDEIDAIGGARFDDGAGG 295
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L T +D P ++ V+ +TNR + +D AL R GR D
Sbjct: 296 DNEVQRTMLELITQLDGFDPRG----NIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPD 351
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R IL+++ K + +D ++ E IA C GA+L ++C EA M A++
Sbjct: 352 LEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIR 402
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 405 (147.6 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 83/262 (31%), Positives = 136/262 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P + + P ++ DIGGL +++++A+E P+ H + +GI P +G +L+G
Sbjct: 166 VDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYG 225
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PG G+EL Y+G+ L+R F+ A APSI+F DE
Sbjct: 226 EPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDE 285
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG KR S S +R + LL ++DG + + V+ ATNR +D AL+RPGR
Sbjct: 286 IDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGR 345
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + P PD++ + +I +HT M + +DV+L + +GA+++ +C E+G++A
Sbjct: 346 IDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLA 405
Query: 512 LREDISATAVRNRHFQTVKDSL 533
LRE V + F+ K+ +
Sbjct: 406 LRE--RRMRVTHTDFKKAKEKV 425
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 81/231 (35%), Positives = 132/231 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG A V+ ++E I PL + +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 186 IGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSAT 245
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
L V+ + K ++G+ K +RE F A A PS+VFIDEIDA+ +R D +
Sbjct: 246 FLRVVGSELIQK-YLGDGPKLVRELFRVADECA----PSIVFIDEIDAVGTKRYDSQSGG 300
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
E+++ R +L +D ++T V V+ +TNR++ +DPAL R GR D
Sbjct: 301 EREIQRTMLELLNQLDGFD-ARTDVK---VIMATNRIETLDPALIRPGRIDRKIEFPLPD 356
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ +I +++T K+ L +V+LE S + GAD++A+C E+ + A++
Sbjct: 357 IKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALR 407
Score = 39 (18.8 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 61 PPGT--GKTSLVRAVVRECGAHLTVISPHS 88
PP T GK R E L VI+PHS
Sbjct: 25 PPPTQFGKKKKRRGA--ETSTKLPVITPHS 52
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 90/242 (37%), Positives = 126/242 (52%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R IL++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 82/239 (34%), Positives = 126/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R ILK++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 92/241 (38%), Positives = 132/241 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL +++ +A+ WP+K + F +LGI +GAL++GPPG
Sbjct: 204 EKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLAR 263
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D VG KR S
Sbjct: 264 ACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDS 323
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ +R + LL ++DG I VLAATNR +D AL+R GR D + P P+
Sbjct: 324 EKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPN 383
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
EAR IL++H+R M V D V+ +A T+ F GA+L+ +C EAG++ALR+ S
Sbjct: 384 EEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHE 443
Query: 523 N 523
N
Sbjct: 444 N 444
Score = 347 (127.2 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 82/229 (35%), Positives = 131/229 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG +E + E I +P+ + + +KLG+K P+G L+YGPPGTGKT L RA E A
Sbjct: 213 IGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNAT 272
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L + P V + +G+ K +R+ F+ A A PS++FIDE+DA+ +R D +
Sbjct: 273 FLKLAGPQLV-QMFIGDGAKLVRDCFALAKEKA----PSIIFIDELDAVGTKRFDSEKSG 327
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ S + V+A+TNRVD +DPAL RSGR D
Sbjct: 328 DREVQRTMLELLNQ-LDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEA 386
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+++++K+ ++ +V+ +A S + + GA L+A+C EA M A+++
Sbjct: 387 RANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRK 435
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 91/242 (37%), Positives = 128/242 (52%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P VT+ D+GG +D +KL++ VE P+ F+ LGI P +G LL+G
Sbjct: 191 IDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYG 250
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR IIFFDE
Sbjct: 251 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 310
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG R + +R + L+T++DG + I V+ ATNRP+ +D AL+RPGR
Sbjct: 311 IDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGR 370
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I R+H+++M V + I+ TGAEL +C EAG+ A
Sbjct: 371 IDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFA 430
Query: 512 LR 513
+R
Sbjct: 431 IR 432
Score = 311 (114.5 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 83/239 (34%), Positives = 124/239 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL + LG+ P+G+LLYGPPGTGKT RAV A
Sbjct: 211 VGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDAT 270
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 271 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACIIFFDEIDAVGGARFDDGAGG 325
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L T +D P ++ V+ +TNR + +DPAL R GR D
Sbjct: 326 DNEVQRTMLELITQLDGFDPRG----NIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPD 381
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I ++++K + ++ + E I+ C GA+L ++C EA M A++ R A E
Sbjct: 382 LEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATE 440
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 92/245 (37%), Positives = 135/245 (55%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P ++ +IP T++ +GGL K++++ +E PIKH F LGI+ +G LL+G
Sbjct: 127 IDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 186
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+GE ++R F AR APSIIF DE
Sbjct: 187 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDE 246
Query: 392 ADVVGAKRG--GSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRP 449
D +G+ RG GS V +R + LL ++DG E K I VL TNR +D AL+RP
Sbjct: 247 IDSIGSSRGESGSGGGDSEV-QRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRP 305
Query: 450 GRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGI 509
GR D + P P R +IL++H+R M + ++L+ I+++ +GAEL+ +C EAG+
Sbjct: 306 GRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGM 365
Query: 510 VALRE 514
ALRE
Sbjct: 366 YALRE 370
Score = 345 (126.5 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 76/230 (33%), Positives = 126/230 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 145 DMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 204
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 205 CTFIRVSGSELVQKYIGEGSRMVRELFIMAREHA----PSIIFMDEIDSIGSSRGESGSG 260
Query: 139 --DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
D + + L++ + S ++ V+ TNR+D +DPAL R GR D
Sbjct: 261 GGDSEVQRTMLELLNQLDGFE-STKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGD 319
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L+ I+ NG GA+L+A+C EA M A++
Sbjct: 320 AGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALR 369
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 148 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 207
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 208 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 267
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 268 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 327
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 328 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 387
Query: 512 LR 513
+R
Sbjct: 388 IR 389
Score = 313 (115.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 168 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 227
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 228 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 282
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 283 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 338
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 339 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 397
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 156 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 215
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 216 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 275
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 276 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 335
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 336 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 395
Query: 512 LR 513
+R
Sbjct: 396 IR 397
Score = 313 (115.2 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 176 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 235
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 236 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 290
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 291 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 346
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 347 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 405
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 20 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 79
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 80 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 139
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 140 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 199
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 200 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 259
Query: 512 LR 513
+R
Sbjct: 260 IR 261
Score = 313 (115.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 40 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 99
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 100 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 154
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 155 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 210
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 211 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 269
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 199 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 258
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 259 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 318
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 319 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 378
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 379 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 438
Query: 512 LR 513
+R
Sbjct: 439 IR 440
Score = 313 (115.2 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 219 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 278
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 279 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 333
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 334 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 389
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 390 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 448
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 158 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 217
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 218 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 277
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 278 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 337
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 338 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 397
Query: 512 LR 513
+R
Sbjct: 398 IR 399
Score = 313 (115.2 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 178 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 237
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 238 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 292
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 293 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 348
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 349 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 407
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 406
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 424 (154.3 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 90/243 (37%), Positives = 136/243 (55%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + T E +VT+ D+ G+ ++K++L + VE+ +K+ ++ LG +G LL G
Sbjct: 141 GKSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQ 199
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 200 PGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEI 259
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG +RG E+ L+ LL EMDG +GI+++AATNRP +D AL+RPGRF
Sbjct: 260 DAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRF 319
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + V PD+ R EIL+VH + +GDDVDL +A T FTGA+L + EA ++A
Sbjct: 320 DRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAA 379
Query: 513 RED 515
R +
Sbjct: 380 RRN 382
Score = 330 (121.2 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 102/302 (33%), Positives = 146/302 (48%)
Query: 4 KGRIMSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPP 62
K R +EK + A + G E L E++ F L + +LG + P+G+LL+G P
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQP 200
Query: 63 GTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFI 122
GTGKT L RA+ E G IS + VG +R+ F QA +A P +VFI
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNA----PCIVFI 256
Query: 123 DEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
DEIDA+ +R H REQ + +QL MD ++ ++++A+TNR D +
Sbjct: 257 DEIDAVGRQRGAGLGGGHDEREQTL---NQLLVEMDGFNSNEG----IIIIAATNRPDIL 309
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
DPAL R GRFD R EILK++ K PL +VDL+ +A G+ GADL
Sbjct: 310 DPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLAN 369
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHA--RSVVGPSITRGVTVEIPK--VTWED 291
+ EA + A +R+ + ME+ A R + GP V E K V + +
Sbjct: 370 MVNEAALLAARRNKKV--------INMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHE 421
Query: 292 IG 293
G
Sbjct: 422 AG 423
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 424 (154.3 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 90/243 (37%), Positives = 136/243 (55%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + T E +VT+ D+ G+ ++K++L + VE+ +K+ ++ LG +G LL G
Sbjct: 141 GKSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQ 199
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 200 PGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEI 259
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG +RG E+ L+ LL EMDG +GI+++AATNRP +D AL+RPGRF
Sbjct: 260 DAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRF 319
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + V PD+ R EIL+VH + +GDDVDL +A T FTGA+L + EA ++A
Sbjct: 320 DRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAA 379
Query: 513 RED 515
R +
Sbjct: 380 RRN 382
Score = 330 (121.2 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 102/302 (33%), Positives = 146/302 (48%)
Query: 4 KGRIMSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPP 62
K R +EK + A + G E L E++ F L + +LG + P+G+LL+G P
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQP 200
Query: 63 GTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFI 122
GTGKT L RA+ E G IS + VG +R+ F QA +A P +VFI
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNA----PCIVFI 256
Query: 123 DEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
DEIDA+ +R H REQ + +QL MD ++ ++++A+TNR D +
Sbjct: 257 DEIDAVGRQRGAGLGGGHDEREQTL---NQLLVEMDGFNSNEG----IIIIAATNRPDIL 309
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
DPAL R GRFD R EILK++ K PL +VDL+ +A G+ GADL
Sbjct: 310 DPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLAN 369
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHA--RSVVGPSITRGVTVEIPK--VTWED 291
+ EA + A +R+ + ME+ A R + GP V E K V + +
Sbjct: 370 MVNEAALLAARRNKKV--------INMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHE 421
Query: 292 IG 293
G
Sbjct: 422 AG 423
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 106/331 (32%), Positives = 162/331 (48%)
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC--AGVL 258
E+L L ANVDL+A T C A ++ R V D +E ++
Sbjct: 88 ELLDLEDNTEEEGANVDLDAQKTKC-----AVIKTSTRATYFLPVVGLVDPDELKPGDLV 142
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEI---PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
V + + + +R +E+ P + DIGG ++L +AV P+ H
Sbjct: 143 GVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDR 202
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F LGI P +G L++GPPG G +L M++G+ L+R+
Sbjct: 203 FVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 262
Query: 376 FQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAA 435
F A+ AP+IIF DE D +G KR S +R + LL ++DG + I V+AA
Sbjct: 263 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAA 322
Query: 436 TNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELF 495
TNR +D AL+R GR D + +P P+ +AR I+++H+R M V DV+ +A T+ F
Sbjct: 323 TNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDF 382
Query: 496 TGAELEGLCREAGIVALREDISATAVRNRHF 526
GA+ + +C EAG++ALR D AT + + F
Sbjct: 383 NGAQCKAVCVEAGMIALRRD--ATEILHEDF 411
Score = 336 (123.3 bits), Expect = 5.3e-30, P = 5.3e-30
Identities = 82/257 (31%), Positives = 142/257 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E + P+ + + LG+ P+G+L+YGP
Sbjct: 160 DSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGP 219
Query: 62 PGTGKTSLVRAVVREC-GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RAV + L + P V + +G+ K +R+AF+ A A P+++
Sbjct: 220 PGTGKTMMARAVAAQTKSTFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PAII 274
Query: 121 FIDEIDALCPRR-DHRR--EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAID 176
FIDE+DA+ +R D + +++V R +L +D +P+ + V+A+TNR+D +D
Sbjct: 275 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDD----IKVIAATNRIDVLD 330
Query: 177 PALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEAL 236
PAL RSGR D R I++++++K+ ++ +V+ E +A + + GA +A+
Sbjct: 331 PALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAV 390
Query: 237 CREATMSAVKRSSDANE 253
C EA M A++R DA E
Sbjct: 391 CVEAGMIALRR--DATE 405
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 106/331 (32%), Positives = 162/331 (48%)
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC--AGVL 258
E+L L ANVDL+A T C A ++ R V D +E ++
Sbjct: 88 ELLDLEDNTEEEGANVDLDAQKTKC-----AVIKTSTRATYFLPVVGLVDPDELKPGDLV 142
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEI---PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
V + + + +R +E+ P + DIGG ++L +AV P+ H
Sbjct: 143 GVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDR 202
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F LGI P +G L++GPPG G +L M++G+ L+R+
Sbjct: 203 FVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 262
Query: 376 FQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAA 435
F A+ AP+IIF DE D +G KR S +R + LL ++DG + I V+AA
Sbjct: 263 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAA 322
Query: 436 TNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELF 495
TNR +D AL+R GR D + +P P+ +AR I+++H+R M V DV+ +A T+ F
Sbjct: 323 TNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDF 382
Query: 496 TGAELEGLCREAGIVALREDISATAVRNRHF 526
GA+ + +C EAG++ALR D AT + + F
Sbjct: 383 NGAQCKAVCVEAGMIALRRD--ATEILHEDF 411
Score = 336 (123.3 bits), Expect = 5.3e-30, P = 5.3e-30
Identities = 82/257 (31%), Positives = 142/257 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E + P+ + + LG+ P+G+L+YGP
Sbjct: 160 DSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGP 219
Query: 62 PGTGKTSLVRAVVREC-GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RAV + L + P V + +G+ K +R+AF+ A A P+++
Sbjct: 220 PGTGKTMMARAVAAQTKSTFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PAII 274
Query: 121 FIDEIDALCPRR-DHRR--EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAID 176
FIDE+DA+ +R D + +++V R +L +D +P+ + V+A+TNR+D +D
Sbjct: 275 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDD----IKVIAATNRIDVLD 330
Query: 177 PALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEAL 236
PAL RSGR D R I++++++K+ ++ +V+ E +A + + GA +A+
Sbjct: 331 PALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAV 390
Query: 237 CREATMSAVKRSSDANE 253
C EA M A++R DA E
Sbjct: 391 CVEAGMIALRR--DATE 405
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIPVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 89/242 (36%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LR 513
+R
Sbjct: 397 IR 398
Score = 313 (115.2 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 237 FIPVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ E +A C GA++ ++C EA M A++ R A E
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 423 (154.0 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 92/232 (39%), Positives = 129/232 (55%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V ++D+ G+ + K++LQ+ V + +K F+ +G +G LL GPPG
Sbjct: 169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G+E M+VG + +R+ F++A+ AP +IF DE D VG +RG
Sbjct: 228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGG 287
Query: 407 ITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEAR 466
E+ L+ LLTEMDG E GI+++AATNRP +D+ALMRPGRFD + V PD R
Sbjct: 288 NDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGR 347
Query: 467 HEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISA 518
EIL VH RN K+ +V + SIA T F+GA+L L EA I+ R SA
Sbjct: 348 KEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSA 399
Score = 303 (111.7 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+ G A E L+E++TF L + +G K P+G+LL GPPGTGKT L +A+ E G
Sbjct: 174 VAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVP 232
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-------D 133
IS + VG +R+ F +A +A P ++FIDEIDA+ +R +
Sbjct: 233 FFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCLIFIDEIDAVGRQRGAGIGGGN 288
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
REQ + +QL T MD + T + +++A+TNR D +D AL R GRFD
Sbjct: 289 DEREQTL---NQLLTEMDGFE-GNTGI---IIIAATNRPDVLDSALMRPGRFDRQVMVDA 341
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R EIL+++ + L V +++IA G+ GADL L EA + +R A
Sbjct: 342 PDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSA 399
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 422 (153.6 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 98/268 (36%), Positives = 140/268 (52%)
Query: 270 SVVGPSITRGVTVEIP----KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR 325
SV+G G + P KVT++D+ G+ + K +L++ V++ ++ F R+G +
Sbjct: 151 SVMGNFSKSGAKMYTPSAKVKVTFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPK 209
Query: 326 GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPS 385
G LL GPPG ++ M+VG +R+ F A+ +APS
Sbjct: 210 GVLLVGPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPS 269
Query: 386 IIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAA 445
IIF DE D VG RG E+ L+ LL+EMDG + ++V+AATNRP +D A
Sbjct: 270 IIFIDELDAVGRSRGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPA 329
Query: 446 LMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCR 505
L+RPGRFD + + PD R +IL VHTR + + DVDL IA T GA+LE L
Sbjct: 330 LLRPGRFDRHVVIDRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVN 389
Query: 506 EAGIVALREDISATAVRNRHFQTVKDSL 533
EA I+A RE+ A V H + KD +
Sbjct: 390 EAAILAAREN--AATVTMEHMERAKDKV 415
Score = 325 (119.5 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 96/262 (36%), Positives = 135/262 (51%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
++ G +E L+E++ + L + Q++G K P+G+LL GPPGTGKT L RAV E
Sbjct: 175 DDVAGMENPKME-LKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEA 232
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD---- 133
IS + VG +R+ F+ A A PS++FIDE+DA+ R
Sbjct: 233 DVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSA----PSIIFIDELDAVGRSRGAGLG 288
Query: 134 --H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXX 190
H REQ + +QL + MD S V+V+A+TNR D +DPAL R GRFD
Sbjct: 289 GGHDEREQTL---NQLLSEMDGFD----SHDEVIVMAATNRPDVLDPALLRPGRFDRHVV 341
Query: 191 XXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +IL ++T+K+PLD +VDL IA G GADLE L EA + A + ++
Sbjct: 342 IDRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENA- 400
Query: 251 ANECAGVLSVTMEDWRHARSVV 272
+VTME A+ V
Sbjct: 401 -------ATVTMEHMERAKDKV 415
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 399 (145.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 83/260 (31%), Positives = 138/260 (53%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P ++ DIGGL ++++++VE P+ H + +GI P +G +L+G PG
Sbjct: 177 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 236
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+EL Y+G+ L R F+ A APSI+F DE D +G KR S+S
Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS 296
Query: 405 TSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLE 464
+R + LL ++DG + + V+ ATN+ +D AL+RPGR D + PDL
Sbjct: 297 GGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLS 356
Query: 465 ARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED-ISATAVRN 523
+ +IL +HT M + +DV+L ++ + +GA+++ +C EAG++ALRE + TA
Sbjct: 357 TKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTA--- 413
Query: 524 RHFQTVKDSLKPALTKEEID 543
F+ K+ + +E ++
Sbjct: 414 EDFKQAKERVMKNKVEENLE 433
Score = 326 (119.8 bits), Expect = 9.4e-31, Sum P(2) = 9.4e-31
Identities = 79/254 (31%), Positives = 137/254 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 184 IGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSAT 243
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L ++ + K ++G+ + R+ F A +A PS+VFIDEIDA+ +R D
Sbjct: 244 FLRIVGSELIQK-YLGDGPRLCRQIFKVAGENA----PSIVFIDEIDAIGTKRYDSNSGG 298
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ V V+ +TN+++ +DPAL R GR D
Sbjct: 299 EREIQRTMLELLNQ-LDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLST 357
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+ +IL ++T K+ L +V+LE + T+ + GAD++A+C EA + A++ +
Sbjct: 358 KKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERR--------M 409
Query: 259 SVTMEDWRHARSVV 272
VT ED++ A+ V
Sbjct: 410 QVTAEDFKQAKERV 423
Score = 38 (18.4 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELI 35
+ EK + EE I GN ++ L E+I
Sbjct: 89 QEEEKKQLEE-IRGNPLSIGTLEEII 113
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 98/313 (31%), Positives = 159/313 (50%)
Query: 208 KKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRH 267
+ VPL LEA+ + G VG+ + +S + R A SV + +
Sbjct: 78 QSVPLVIGQFLEAVDQN-TGIVGSTTGSNYYVRILSTIDREL-LKPSA---SVALHKHSN 132
Query: 268 AR-SVVGPSITRGVTV----EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS 322
A V+ P +++ E P V++ DIGG+ K+++++AVE P+ H + ++GI
Sbjct: 133 ALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGID 192
Query: 323 PVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLA 382
P RG L++GPPGC G+E Y+GE ++R+ F+ A+
Sbjct: 193 PPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 252
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAI 442
AP+IIF DE D + KR + + + +R+L LL +MDG +Q + V+ ATNR +
Sbjct: 253 APAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 312
Query: 443 DAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEG 502
D AL+RPGR D + P PD + + T M + +DVDL + +GA++
Sbjct: 313 DPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINA 372
Query: 503 LCREAGIVALRED 515
+C+EAG+ A+RE+
Sbjct: 373 ICQEAGMHAVREN 385
Score = 318 (117.0 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 81/244 (33%), Positives = 125/244 (51%)
Query: 8 MSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
M + +EK A IGG + +RE + PL + +++G+ PRG+L+YGPPG GK
Sbjct: 148 MLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 207
Query: 67 TSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEI 125
T L +AV A + V+ V K ++GE + +R+ F A +A P+++FIDEI
Sbjct: 208 TMLAKAVAHHTTASFIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAIIFIDEI 262
Query: 126 DALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
DA+ +R D + D + L L++ +V V+ +TNR D +DPAL R GR
Sbjct: 263 DAIATKRFDAQTGADREVQRILLELLNQ-MDGFDQTTNVKVIMATNRADTLDPALLRPGR 321
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
D + + T K+ L +VDLE + GAD+ A+C+EA M A
Sbjct: 322 LDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHA 381
Query: 245 VKRS 248
V+ +
Sbjct: 382 VREN 385
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 97/313 (30%), Positives = 159/313 (50%)
Query: 208 KKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRH 267
+ VPL LEA+ + + VG+ + +S + R C SV + + +
Sbjct: 79 QSVPLVIGQFLEAVDQN-HAIVGSTTGSNYYVRVLSILDRELLKPGC----SVALHKYSN 133
Query: 268 AR-SVVGPSITRGVTV----EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS 322
A V+ P + + E P +++ DIGGL K+++++AVE P+ H + ++GI
Sbjct: 134 ALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGID 193
Query: 323 PVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLA 382
P RG L++GPPGC G+E Y+GE ++R+ F+ A+
Sbjct: 194 PPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 253
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAI 442
+PSIIF DE D + KR + + + +R+L LL +MDG +Q+ + V+ ATNR +
Sbjct: 254 SPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTL 313
Query: 443 DAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEG 502
D AL+RPGR D + P PD + + M + DDVDL + +GA++
Sbjct: 314 DPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINS 373
Query: 503 LCREAGIVALRED 515
+C+EAG+ A+RE+
Sbjct: 374 ICQEAGMQAVREN 386
Score = 305 (112.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 76/230 (33%), Positives = 119/230 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + +RE + PL + Q++G+ PRG+L+YGPPG GKT L +AV A
Sbjct: 163 IGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAAS 222
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A ++ PS++FIDEIDA+ +R D +
Sbjct: 223 FIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENS----PSIIFIDEIDAIATKRFDAQTGA 277
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ S +V V+ +TNR D +DPAL R GR D
Sbjct: 278 DREVQRILLELLNQMDGFDQST-NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQ 336
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ + ++ L +VDLE + GAD+ ++C+EA M AV+ +
Sbjct: 337 KRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVREN 386
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 91/242 (37%), Positives = 127/242 (52%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T + P VT+ D+GG ++ +KL++ VE P+ F LGI P +GALL+G
Sbjct: 167 IDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYG 226
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR IIFFDE
Sbjct: 227 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 286
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG R + +R + L+T++DG + I V+ ATNRP +D ALMRPGR
Sbjct: 287 IDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGR 346
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PD+E R ILR+H ++M V D+ I+ TGAEL + EAG+ A
Sbjct: 347 IDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFA 406
Query: 512 LR 513
+R
Sbjct: 407 IR 408
Score = 299 (110.3 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 79/236 (33%), Positives = 119/236 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL + LG+ P+G LLYGPPGTGKT RAV A
Sbjct: 187 VGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D
Sbjct: 247 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACIIFFDEIDAVGGARFDDGAGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L+ + + ++ V+ +TNR +DPAL R GR D
Sbjct: 302 DNEVQRTMLELI-TQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEG 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R IL+++ K + ++ ++ E I+ C GA+L ++ EA M A++ R A E
Sbjct: 361 RANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKVATE 416
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 429 (156.1 bits), Expect = 3.5e-39, P = 3.5e-39
Identities = 141/488 (28%), Positives = 232/488 (47%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGA--HLTV--ISPHSVHK-AHVGESEKALREAFSQASS 110
++L G G GKT L++ ++ E H+ V ++H+ +++ +++K + E S
Sbjct: 457 IILDGKQGIGKTRLLKELINEVEKDHHIFVKYADCETLHETSNLDKTQKLIMEWCSFCYW 516
Query: 111 HALSGKPSVVFIDEIDALC--PRR---DHRREQDVRIASQL--FTLMDSNKPSKTSVPHV 163
+ PS++ +D ++AL P+ D AS+L F + K +
Sbjct: 517 YG----PSLIVLDNVEALFGKPQANDGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKRI 572
Query: 164 VVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILK-LYTKKVPLDANVDLEA-- 220
V+ S + I+P L R ++L+ ++K + N DL+
Sbjct: 573 RVLFSGKQKTQINPLLFDKHFVSETWSLRAPDKHARAKLLEYFFSKNQIMKLNRDLQFSD 632
Query: 221 IATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGV 280
++ G+ DLE + E ++ D C V VT E + + S PS RGV
Sbjct: 633 LSLETEGFSPLDLE-IFTEKIFYDLQLERD---CDNV--VTRELFSKSLSAFTPSALRGV 686
Query: 281 TV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
+ + + W DIG L + K L + +EWP K+ F + G LL+G PGC
Sbjct: 687 KLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTL 746
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKR 399
G E+ + ++G SE +R F+RA+ P I+FFDE D + KR
Sbjct: 747 LASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKR 806
Query: 400 GGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVP 459
G ST +T +R+++ LLT+MDG E G+ +LAAT+RP ID+AL+RPGR D +
Sbjct: 807 G-HDSTGVT--DRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICN 863
Query: 460 PPDLEARHEILR--VHTRNMKVGD-------DVDLRSIAEETELFTGAELEGLCREAGIV 510
P R +IL+ V++++ G + DL+ IAE+T F+GA+L+GLC A +
Sbjct: 864 IPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLK 923
Query: 511 ALREDISA 518
++ +SA
Sbjct: 924 SVHRWLSA 931
Score = 311 (114.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 87/253 (34%), Positives = 126/253 (49%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
++ E N KW IG A + L E + +P Y L+ G+LLYG PG G
Sbjct: 687 KLTKETNIKWGD---IGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCG 743
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L AV ++CG + ++V P ++K +G SE+ +RE F +A S KP ++F DE
Sbjct: 744 KTLLASAVAQQCGLNFISVKGPEILNK-FIGASEQNIRELFERAQSV----KPCILFFDE 798
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
D++ P+R H R+ +QL T MD + + V ++A+T+R D ID AL R G
Sbjct: 799 FDSIAPKRGHDSTGVTDRVVNQLLTQMDGAE----GLDGVYILAATSRPDLIDSALLRPG 854
Query: 184 RFDXXXXXXXXXXXXRFEILKLYT---------KKVPLDANVDLEAIATSCNGYVGADLE 234
R D R +IL+ KK L+ N DL+ IA G+ GADL+
Sbjct: 855 RLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQ 914
Query: 235 ALCREATMSAVKR 247
LC A + +V R
Sbjct: 915 GLCYNAYLKSVHR 927
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 86/242 (35%), Positives = 126/242 (52%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P VT+ D+GG ++ +K+++ VE P+ H F +LGI P +G L +G
Sbjct: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R FQ AR I+FFDE
Sbjct: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R +R + ++ ++DG + I VL ATNRP +D AL+RPGR
Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE+R +I ++HTR M D+ +A TGA++ +C EAG+ A
Sbjct: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 512 LR 513
+R
Sbjct: 390 IR 391
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 77/228 (33%), Positives = 121/228 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E +RE++ P+L+ + KLG+ P+G+L YGPPGTGKT L RAV A
Sbjct: 170 VGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDAC 229
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ VI V K +VGE + +RE F A S K +VF DE+DA+ R D
Sbjct: 230 FIRVIGSELVQK-YVGEGARMVRELFQMARSK----KACIVFFDEVDAIGGARFDDGVGG 284
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + +++ + ++ V+ +TNR D +DPAL R GR D
Sbjct: 285 DNEVQRTMLEIVNQ-LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +I K++T+ + + ++ E +A C GAD+ ++C EA M A++
Sbjct: 344 RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 88/260 (33%), Positives = 139/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 168 PMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 227
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 228 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
VG KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 288 AVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 347
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I +HT M + +DV+L + + +GA+++ +C EAG++ALR
Sbjct: 348 RKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALR 407
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+S+
Sbjct: 408 E--RRMKVTNEDFKKSKESV 425
Score = 326 (119.8 bits), Expect = 6.9e-29, P = 6.9e-29
Identities = 81/254 (31%), Positives = 135/254 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 186 IGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 245
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 246 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAVGTKRYDSNSGG 300
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 301 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 359
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+ I ++T ++ L +V+L + + + GAD++A+C EA + A++ +
Sbjct: 360 KRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERR--------M 411
Query: 259 SVTMEDWRHARSVV 272
VT ED++ ++ V
Sbjct: 412 KVTNEDFKKSKESV 425
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 168 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 227
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 228 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 288 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 347
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 348 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALR 407
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 408 E--RRMKVTNEDFKKSKENV 425
Score = 325 (119.5 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 186 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 245
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 246 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 300
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 301 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 359
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 360 KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 416
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 167 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 226
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 227 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 286
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 287 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 346
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 347 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALR 406
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 407 E--RRMKVTNEDFKKSKENV 424
Score = 325 (119.5 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 185 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 244
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 245 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 299
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 300 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 358
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 359 KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 415
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 96 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 155
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 156 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 215
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 216 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 275
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 276 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 335
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 336 E--RRMKVTNEDFKKSKENV 353
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 114 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 173
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 174 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 228
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 229 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 287
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 288 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 344
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 87/260 (33%), Positives = 140/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 324 (119.1 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 89/242 (36%), Positives = 124/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG +D +KL++ VE P+ H + LGI P +G LL+G
Sbjct: 159 IDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYG 218
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 219 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 278
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG R +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 279 IDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 338
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDL R IL++H + M V D+ +A TGAE+ +C EAG+ A
Sbjct: 339 LDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 512 LR 513
+R
Sbjct: 399 IR 400
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 83/239 (34%), Positives = 128/239 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LLYGPPGTGKT RAV A
Sbjct: 179 VGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDAC 238
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D +
Sbjct: 239 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAVGGARFDDGQGG 293
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 294 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R ILK++ K++ ++ ++ + +A C GA++ ++C EA M A++ R A E
Sbjct: 350 LAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 408
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 89/242 (36%), Positives = 124/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T E P VT+ D+GG +D +KL++ VE P+ H + LGI P +G LL+G
Sbjct: 159 IDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYG 218
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 219 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDE 278
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG R +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 279 IDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 338
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDL R IL++H + M V D+ +A TGAE+ +C EAG+ A
Sbjct: 339 LDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 512 LR 513
+R
Sbjct: 399 IR 400
Score = 322 (118.4 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 83/239 (34%), Positives = 128/239 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LLYGPPGTGKT RAV A
Sbjct: 179 VGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDAC 238
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DEIDA+ R D +
Sbjct: 239 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACLIFFDEIDAVGGARFDDGQGG 293
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 294 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R ILK++ K++ ++ ++ + +A C GA++ ++C EA M A++ R A E
Sbjct: 350 LAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 408
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 407 (148.3 bits), Expect = 6.9e-39, Sum P(2) = 6.9e-39
Identities = 97/237 (40%), Positives = 135/237 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 406 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 465
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +PS++F DEID L P R
Sbjct: 466 QGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPSIIFFDEIDGLAPVR 520
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 521 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 576
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EILK++T+ P ++ LE +A +C GY GAD++++C EA + A++R
Sbjct: 577 SLPDKDARKEILKIHTRDWNPKPLDIFLEELAENCVGYCGADIKSICSEAALCALRR 633
Score = 353 (129.3 bits), Expect = 5.7e-29, P = 5.7e-29
Identities = 90/252 (35%), Positives = 129/252 (51%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL + L++ V +P+ + F + I P RG
Sbjct: 384 RMKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 443
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 444 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 503
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAI 442
PSIIFFDE D + R SS + ++STLL MDGL+ I+V+ ATNR +I
Sbjct: 504 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSI 560
Query: 443 DAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGD-DVDLRSIAEETELFTGAELE 501
D AL RPGRFD PD +AR EIL++HTR+ D+ L +AE + GA+++
Sbjct: 561 DPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDIFLEELAENCVGYCGADIK 620
Query: 502 GLCREAGIVALR 513
+C EA + ALR
Sbjct: 621 SICSEAALCALR 632
Score = 51 (23.0 bits), Expect = 6.9e-39, Sum P(2) = 6.9e-39
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 409 VGERLLSTLLTEMDGLEQAKGILVLAATNRPHA 441
VG L +T T + + +L+LA +++PH+
Sbjct: 849 VGPTLKATFTTLLQNIPSFAPVLLLATSDKPHS 881
Score = 39 (18.8 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 232 DLEALCREATMSAVKRSSDANECA 255
D E LC E S KR +++ A
Sbjct: 1076 DFEQLCEEIQESRKKRGCSSSKYA 1099
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 417 (151.9 bits), Expect = 9.6e-39, P = 9.6e-39
Identities = 89/233 (38%), Positives = 131/233 (56%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E KV + D+ G + K++L + VE+ +K F+ +G +G LL GPPG
Sbjct: 155 EKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLAR 213
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G++ M+VG + +R+ F+ A+ AP IIF DE D VG +RG
Sbjct: 214 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAG 273
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
E+ L+ LL EMDG +GI+++AATNRP +D AL+RPGRFD + V PD
Sbjct: 274 LGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPD 333
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED 515
+ R +L+VH RN + ++++LR+IA T F+GA+LE L EA +VA R+D
Sbjct: 334 VNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQD 386
Score = 334 (122.6 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 89/253 (35%), Positives = 134/253 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK ++ ++ +K + + G + E L E++ F L + ++G + P+G+LL GP
Sbjct: 146 KSKAKLYNDEKKKVRFRDVAGADEEKQE-LVEVVEF-LKDPRKFAEVGARIPKGVLLVGP 203
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RAV E G IS + VG +R+ F A +A P ++F
Sbjct: 204 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNA----PCIIF 259
Query: 122 IDEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ +R H REQ + +QL MD ++ ++++A+TNR D
Sbjct: 260 IDEIDAVGRQRGAGLGGGHDEREQTL---NQLLVEMDGFGANEG----IIIIAATNRPDI 312
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +LK++ + PLD N++L AIAT G+ GADLE
Sbjct: 313 LDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLE 372
Query: 235 ALCREATMSAVKR 247
L EA + A ++
Sbjct: 373 NLLNEAALVAARQ 385
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 86/231 (37%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 144 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 203
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 204 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDS 263
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 264 EKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 323
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAGI+ALR
Sbjct: 324 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALR 374
Score = 337 (123.7 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 134 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 193
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AFS A A PS++
Sbjct: 194 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFSLAKEKA----PSII 248
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 249 FIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTT-QVKVIAATNRVDILDPAL 307
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 308 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 367
Query: 240 ATMSAVKRSS 249
A + A++R +
Sbjct: 368 AGIIALRRGA 377
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 85/242 (35%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P +T+ DIGG ++ +KL++ VE P+ F LGI P +G LL+G
Sbjct: 144 IDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYG 203
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R FQ A+ I+F DE
Sbjct: 204 PPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDE 263
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G RG S+ +R + ++ ++DG + I VL ATNRP +D+AL+RPGR
Sbjct: 264 VDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGR 323
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H M + DV +A TG+++ +C EAG+ A
Sbjct: 324 IDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFA 383
Query: 512 LR 513
+R
Sbjct: 384 IR 385
Score = 306 (112.8 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 76/228 (33%), Positives = 116/228 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + +E LRE++ PLL + LG+ P+G+LLYGPPGTGKT RA+ A
Sbjct: 164 IGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDAC 223
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ VI V K +VGE + +RE F A S K ++FIDE+DA+ R D
Sbjct: 224 FICVIGSELVQK-YVGEGARMVRELFQMAKSK----KACILFIDEVDAIGGSRGDESAHG 278
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + +++ + ++ V+ +TNR D +D AL R GR D
Sbjct: 279 DHEVQRTMLEIVNQ-LDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I K++ + + +V E +A C G+D+ ++C EA M A++
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIR 385
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 85/242 (35%), Positives = 125/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P +T+ DIGG ++ +KL++ VE P+ F LGI P +G LL+G
Sbjct: 144 IDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYG 203
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R FQ A+ I+F DE
Sbjct: 204 PPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDE 263
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G RG S+ +R + ++ ++DG + I VL ATNRP +D+AL+RPGR
Sbjct: 264 VDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGR 323
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I ++H M + DV +A TG+++ +C EAG+ A
Sbjct: 324 IDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFA 383
Query: 512 LR 513
+R
Sbjct: 384 IR 385
Score = 306 (112.8 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 76/228 (33%), Positives = 116/228 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + +E LRE++ PLL + LG+ P+G+LLYGPPGTGKT RA+ A
Sbjct: 164 IGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDAC 223
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ VI V K +VGE + +RE F A S K ++FIDE+DA+ R D
Sbjct: 224 FICVIGSELVQK-YVGEGARMVRELFQMAKSK----KACILFIDEVDAIGGSRGDESAHG 278
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + +++ + ++ V+ +TNR D +D AL R GR D
Sbjct: 279 DHEVQRTMLEIVNQ-LDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I K++ + + +V E +A C G+D+ ++C EA M A++
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIR 385
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 83/243 (34%), Positives = 132/243 (54%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G
Sbjct: 175 VDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 234
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+G+ L+R F+ A APSI+F DE
Sbjct: 235 PPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDE 294
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG KR ++S +R + LL ++DG + + V+ ATNR ++D AL+RPGR
Sbjct: 295 IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGR 354
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + +P PD + + I ++HT M + DVDL + +GA+++ +C EAG++A
Sbjct: 355 IDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLA 414
Query: 512 LRE 514
LRE
Sbjct: 415 LRE 417
Score = 347 (127.2 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 84/250 (33%), Positives = 131/250 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + + +G+K P+G++LYGPPGTGKT L +AV E A
Sbjct: 195 IGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSAT 254
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R
Sbjct: 255 FLRVVGSELIQK-YLGDGPKLVREMFKVAEEHA----PSIVFIDEIDAVGTKRYEATSGG 309
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R + + + S V V+ +TNR+D++DPAL R GR D +
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 369
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
I +++T K+ + +VDLE S + GAD++A+C EA + A++ +
Sbjct: 370 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR--------MK 421
Query: 260 VTMEDWRHAR 269
+T D R AR
Sbjct: 422 ITQADLRKAR 431
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 83/243 (34%), Positives = 132/243 (54%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G
Sbjct: 175 VDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 234
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+G+ L+R F+ A APSI+F DE
Sbjct: 235 PPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDE 294
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG KR ++S +R + LL ++DG + + V+ ATNR ++D AL+RPGR
Sbjct: 295 IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGR 354
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + +P PD + + I ++HT M + DVDL + +GA+++ +C EAG++A
Sbjct: 355 IDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLA 414
Query: 512 LRE 514
LRE
Sbjct: 415 LRE 417
Score = 347 (127.2 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 84/250 (33%), Positives = 131/250 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + + +G+K P+G++LYGPPGTGKT L +AV E A
Sbjct: 195 IGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSAT 254
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R
Sbjct: 255 FLRVVGSELIQK-YLGDGPKLVREMFKVAEEHA----PSIVFIDEIDAVGTKRYEATSGG 309
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R + + + S V V+ +TNR+D++DPAL R GR D +
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 369
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
I +++T K+ + +VDLE S + GAD++A+C EA + A++ +
Sbjct: 370 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR--------MK 421
Query: 260 VTMEDWRHAR 269
+T D R AR
Sbjct: 422 ITQADLRKAR 431
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 407 (148.3 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 103/279 (36%), Positives = 153/279 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 81 DSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 140
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +P+++F DEID L P R
Sbjct: 141 RGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPAIIFFDEIDGLAPVR 195
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 196 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 251
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR--- 247
R EILK++T+ P ++ LE +A C GY GAD++++C EA + A++R
Sbjct: 252 SLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYP 311
Query: 248 ----SSDANEC-AGVLSVTMEDWRHARSVVGPSITRGVT 281
+S+ + ++++ +D+ A + P+ R VT
Sbjct: 312 QIYTTSEKLQLDLSSITISAKDFEAALQKIRPASQRAVT 350
Score = 345 (126.5 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 89/252 (35%), Positives = 127/252 (50%)
Query: 269 RSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL L++ V +P+ + F + I P RG
Sbjct: 59 RMKIGASLADVDPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 118
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 119 LFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 178
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAI 442
P+IIFFDE D + R SS + ++STLL MDGL+ I+V+ ATNR +I
Sbjct: 179 RPAIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSI 235
Query: 443 DAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGD-DVDLRSIAEETELFTGAELE 501
D AL RPGRFD PD AR EIL++HTR+ D+ L +AE + GA+++
Sbjct: 236 DPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIK 295
Query: 502 GLCREAGIVALR 513
+C EA + ALR
Sbjct: 296 SICAEAALCALR 307
Score = 286 (105.7 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 74/195 (37%), Positives = 104/195 (53%)
Query: 357 GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLST 416
GA+ S +VGESE LR F +A P+IIFFDE D + R SS + ++ST
Sbjct: 153 GADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVR---SSRQDQIHSSIVST 209
Query: 417 LLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRN 476
LL MDGL+ I+V+ ATNR +ID AL RPGRFD PD AR EIL++HTR+
Sbjct: 210 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRD 269
Query: 477 MKVGD-DVDLRSIAEETELFTGAELEGLCREAGIVALRE--------------DISATAV 521
D+ L +AE + GA+++ +C EA + ALR D+S+ +
Sbjct: 270 WNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSITI 329
Query: 522 RNRHFQTVKDSLKPA 536
+ F+ ++PA
Sbjct: 330 SAKDFEAALQKIRPA 344
Score = 43 (20.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 409 VGERLLSTLLTEMDGLEQAKGILVLAATNRPH-AIDAALMRPGRFDL--VLYVPPPDLEA 465
VG L +T T + + +L+LA + +P+ A+ + D + V PD E
Sbjct: 518 VGPTLKATFTTLLQTIPSFAPVLLLATSEKPYSALPEEVQELFTHDYGEIFNVQLPDKEE 577
Query: 466 R 466
R
Sbjct: 578 R 578
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 384 (140.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 82/234 (35%), Positives = 125/234 (53%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P VT+ D+GGL K+++++AVE P+ H + ++GI P RG LL+GPPG
Sbjct: 159 EKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVK 218
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G+E Y+GE ++R+ F+ AR +P+IIF DE D + KR +
Sbjct: 219 AVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDA 278
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP-P 461
+ + +R+L LL +MDG EQ + V+ ATNR +D AL+RPGR D + P
Sbjct: 279 QTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLR 338
Query: 462 DLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED 515
D R I M + +VDL S+ E +GA + + +EAG+ A+R++
Sbjct: 339 DRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKN 392
Score = 300 (110.7 bits), Expect = 7.8e-25, P = 7.8e-25
Identities = 82/247 (33%), Positives = 130/247 (52%)
Query: 8 MSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
M NEK A +GG + +RE + PL + +++G+ PRG+LLYGPPGTGK
Sbjct: 154 MLGENEKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGK 213
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T LV+AV A ++ + ++GE + +R+ F A ++ P+++FIDEID
Sbjct: 214 TMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENS----PAIIFIDEID 269
Query: 127 ALCPRR-DHRR--EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRS 182
A+ +R D + +++V RI +L MD + +TS +V V+ +TNR D +DPAL R
Sbjct: 270 AIATKRFDAQTGADREVQRILLELLNQMDGFE--QTS--NVKVIMATNRADTLDPALLRP 325
Query: 183 GRFDXXXXX-XXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R I K+ L VDL+++ GA + A+ +EA
Sbjct: 326 GRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAG 385
Query: 242 MSAVKRS 248
+ AV+++
Sbjct: 386 LRAVRKN 392
Score = 44 (20.5 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 202 ILKLYTKKVPLDA--NVD-LEAIATSCNGYVGADLEALCR 238
+L YTK PLD N+D LE +G A L+ L R
Sbjct: 12 VLSSYTKAAPLDTIPNIDSLEGTGAD-DGDEYATLKKLQR 50
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 86/259 (33%), Positives = 138/259 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A PSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M + DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDS 532
E V N F+ K++
Sbjct: 409 E--RRMKVTNEDFKKSKEN 425
Score = 321 (118.1 bits), Expect = 9.9e-28, P = 9.9e-28
Identities = 78/237 (32%), Positives = 128/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A H PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHG----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 87/260 (33%), Positives = 138/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL ++++++VE P+ H + +GI P +G +L+G P
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M V DDV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 316 (116.3 bits), Expect = 9.8e-27, P = 9.8e-27
Identities = 77/237 (32%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 187 IGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ + +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 125 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 184
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 185 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 244
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 245 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 304
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 305 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 355
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 115 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 174
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 175 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 229
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 230 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 288
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 289 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 348
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 349 AGMIALRRGA 358
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 129 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 188
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 189 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 248
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 249 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 308
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 309 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 359
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 119 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 178
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 179 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 233
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 234 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 292
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 293 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 352
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 353 AGMIALRRGA 362
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 179 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 238
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 358
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 359 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 169 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 228
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 229 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 283
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 284 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 342
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 402
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 403 AGMIALRRGA 412
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 137 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 196
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 197 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 256
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 257 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 316
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 317 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 367
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 127 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 186
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 187 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 241
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 242 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 300
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 301 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 360
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 361 AGMIALRRGA 370
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 179 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 238
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 358
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 359 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 169 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 228
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 229 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 283
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 284 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 342
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 402
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 403 AGMIALRRGA 412
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 186 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 245
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 246 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 305
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 306 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 365
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 366 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 416
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 176 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 235
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 236 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 290
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 291 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 349
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 350 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 409
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 410 AGMIALRRGA 419
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 182 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 241
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 242 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 301
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 361
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 362 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 172 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 231
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 232 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 286
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 287 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 345
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 346 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 405
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 406 AGMIALRRGA 415
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 179 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 238
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 358
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 359 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 169 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 228
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 229 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 283
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 284 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 342
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 402
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 403 AGMIALRRGA 412
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/231 (36%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 182 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 241
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 242 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 301
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 361
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR
Sbjct: 362 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 172 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 231
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 232 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 286
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 287 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 345
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 346 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 405
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 406 AGMIALRRGA 415
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 85/242 (35%), Positives = 124/242 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ S+T E P +T++D+GG ++ +KL++ VE P+ H F LGI P +G L++G
Sbjct: 152 IDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYG 211
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R+ FQ AR IIFFDE
Sbjct: 212 PPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDE 271
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D AL+RPGR
Sbjct: 272 VDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGR 331
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PDLE R I +H + M D+ +A TGA++ +C EAG+ A
Sbjct: 332 LDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFA 391
Query: 512 LR 513
+R
Sbjct: 392 IR 393
Score = 309 (113.8 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 79/231 (34%), Positives = 119/231 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVV-RECGA 79
+GG + +E LRE++ PLL+ + LG+ P+G+L+YGPPGTGKT RAV R A
Sbjct: 172 VGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAA 231
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +R+ F A S K ++F DE+DA+ R D
Sbjct: 232 FVRVIGSELVQK-YVGEGARMVRDLFQMARSK----KACIIFFDEVDAIGGARFDDGAGG 286
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 287 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 342
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I ++ K + ++ E +A C GAD+ ++C EA M A++
Sbjct: 343 LEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIR 393
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 413 (150.4 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 93/261 (35%), Positives = 140/261 (53%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S R +T + K T+ D+ G + K+++ + VE+ ++ + F +LG +G L+ GP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGP 193
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AAP IIF DE
Sbjct: 194 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEI 253
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG +RG E+ L+ +L EMDG E +GI+V+AATNRP +D AL+RPGRF
Sbjct: 254 DAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRF 313
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + V PD+ R +IL+VH R + + D+D IA T F+GA+L L EA + A
Sbjct: 314 DRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAA 373
Query: 513 REDISATAVRNRHFQTVKDSL 533
R + V F+ KD +
Sbjct: 374 RGN--KRVVSMVEFEKAKDKI 392
Score = 326 (119.8 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 90/252 (35%), Positives = 133/252 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK R+++E K + G + A E + EL+ + L S+ QKLG K P+G+L+ GP
Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAK-EEVAELVEY-LREPSRFQKLGGKIPKGVLMVGP 193
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L +A+ E IS + VG +R+ F QA A P ++F
Sbjct: 194 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAA----PCIIF 249
Query: 122 IDEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ +R H REQ + +Q+ MD + ++ ++V+A+TNR D
Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTL---NQMLVEMDGFEGNEG----IIVIAATNRPDV 302
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +ILK++ ++VPL ++D IA G+ GADL
Sbjct: 303 LDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLA 362
Query: 235 ALCREATMSAVK 246
L EA + A +
Sbjct: 363 NLVNEAALFAAR 374
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 85/244 (34%), Positives = 131/244 (53%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P++ + F +LG+ P +G L+ GPPG
Sbjct: 178 EKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLAR 237
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
+L M++G+ L+R+ F A+ +P+IIF DE D +G KR S
Sbjct: 238 ACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDS 297
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + V+AATNR +D AL+R GR D L P P+
Sbjct: 298 EKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPN 357
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
EAR ILR+H+R M + DD++ +A T+ + GA L+ +C EAG++ALR+ T +
Sbjct: 358 EEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQ--GDTKIN 415
Query: 523 NRHF 526
+ HF
Sbjct: 416 HEHF 419
Score = 354 (129.7 bits), Expect = 4.9e-32, P = 4.9e-32
Identities = 89/267 (33%), Positives = 148/267 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + IGG +E L E I P+ + + +KLG+K P+G L++GP
Sbjct: 168 DSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGP 227
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + +P V + +G+ K +R+AF+ A + P+++
Sbjct: 228 PGTGKTLLARACAAQSNATFLKLAAPQLV-QMFIGDGAKLVRDAFALAKEKS----PAII 282
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ +S V V+A+TNRVD +DPAL
Sbjct: 283 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ-LDGFSSDDRVKVIAATNRVDTLDPAL 341
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R IL+++++K+ +D +++ E +A S + Y GA L+++C E
Sbjct: 342 LRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVE 401
Query: 240 ATMSAVKRS-SDANE---CAGVLSVTM 262
A M A+++ + N G+L V M
Sbjct: 402 AGMIALRQGDTKINHEHFMDGILEVQM 428
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 87/244 (35%), Positives = 130/244 (53%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 167 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 226
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 227 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 286
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+R + LL ++DG + + V+AATNR +D AL+R GR D + P P+
Sbjct: 287 EKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 346
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDISATAVR 522
EAR I+++H+R M V DV+ +A T+ F GA+ + +C EAG++ALR AT +
Sbjct: 347 EEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRR--GATELN 404
Query: 523 NRHF 526
+ +
Sbjct: 405 HEDY 408
Score = 339 (124.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 85/265 (32%), Positives = 145/265 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 157 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 216
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 217 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 271
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + ++ V V+A+TNRVD +DPAL
Sbjct: 272 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNM-QVKVIAATNRVDILDPAL 330
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 331 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVE 390
Query: 240 ATMSAVKR-SSDANE---CAGVLSV 260
A M A++R +++ N G+L V
Sbjct: 391 AGMIALRRGATELNHEDYMEGILEV 415
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 86/260 (33%), Positives = 139/260 (53%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+G P
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFD 453
+G KR S+S +R + LL ++DG + + V+ ATNR +D AL+RPGR D
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Query: 454 LVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
+ P PD + + I ++HT M V +DV L + + +GA+++ +C EAG++ALR
Sbjct: 349 RKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALR 408
Query: 514 EDISATAVRNRHFQTVKDSL 533
E V N F+ K+++
Sbjct: 409 E--RRMKVTNEDFKKSKENV 426
Score = 315 (115.9 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 77/237 (32%), Positives = 128/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ + +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 90/263 (34%), Positives = 130/263 (49%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P++T + P VT+ D+GG ++ +KL++ VE P+ H F LGI P +G LL G
Sbjct: 157 IDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFG 216
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR +IFFDE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDE 276
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D +G R + +R + L+ ++DG + I VL ATNRP +D ALMRPGR
Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + PD + R I ++H R+M V D+ +A TGAE+ +C EAG+ A
Sbjct: 337 LDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 512 LREDISATAVRNRHFQTVKDSLK 534
+R A + VK +K
Sbjct: 397 IRAR-RKVATEKDFLEAVKKVIK 418
Score = 312 (114.9 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 81/239 (33%), Positives = 125/239 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL+ + LG++ P+G+LL+GPPGTGKT RAV A
Sbjct: 177 VGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A S K ++F DEIDA+ R D
Sbjct: 237 FIRVIGSELVQK-YVGEGARMVRELFEMARSK----KACLIFFDEIDAIGGARFDDGAGG 291
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L +D P ++ V+ +TNR D +DPAL R GR D
Sbjct: 292 DNEVQRTMLELINQLDGFDPRG----NIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPD 347
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I K++ + + ++ ++ + +A C GA++ ++C EA M A++ R A E
Sbjct: 348 QDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 406
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 415 (151.1 bits), Expect = 3.6e-38, P = 3.6e-38
Identities = 88/236 (37%), Positives = 133/236 (56%)
Query: 283 EIPK--VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXX 340
E+P+ V++ D+ G K +LQ+ V++ +K+ ++ LG +G LL GPPG
Sbjct: 253 EVPETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 311
Query: 341 XXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRG 400
+E ++VG + +R+ F++A+ AP I+F DE D VG +RG
Sbjct: 312 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRG 371
Query: 401 GSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPP 460
E+ ++ LLTEMDG G++VLAATNRP +D+AL+RPGRFD + V
Sbjct: 372 AGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 431
Query: 461 PDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALREDI 516
PD+ R +IL+VH+R +G DVD +A T FTGA+L+ L EA I+A R ++
Sbjct: 432 PDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARREL 487
Score = 305 (112.4 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 96/285 (33%), Positives = 141/285 (49%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ G ++A +E L+E++ F L + LG K P+G LL GPPGTGKT L RAV E G
Sbjct: 263 DVAGADQAKLE-LQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAG 320
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR------ 132
+ + VG +R+ F +A S A P +VFIDEIDA+ +R
Sbjct: 321 VPFFSCAASEFVELFVGVGASRVRDLFEKAKSKA----PCIVFIDEIDAVGRQRGAGMGG 376
Query: 133 -DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
+ REQ + +QL T MD + V+V+A+TNR D +D AL R GRFD
Sbjct: 377 GNDEREQTI---NQLLTEMDGFSGNSG----VIVLAATNRPDVLDSALLRPGRFDRQVTV 429
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R +IL+++++ L +VD + +A G+ GADL+ L EA + A +R +
Sbjct: 430 DRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--EL 487
Query: 252 NECA-GVLSVTMEDWRHARSVVGPSITRGVTVEIPK--VTWEDIG 293
E + +S +E R + GP V E K V + + G
Sbjct: 488 KEISKDEISDALE-----RIIAGPEKKNAVVSEEKKRLVAYHEAG 527
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 82/233 (35%), Positives = 129/233 (55%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P ++ DIGG K+++++AVE P+ H + ++GI P RG LL+GPPG
Sbjct: 143 EKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAK 202
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G+E Y+GE L+R+ F+ AR +P+IIF DE D + KR +
Sbjct: 203 AVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDA 262
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ + +R+L LL +MDG + + + V+ ATNR +D AL+RPGR D + P PD
Sbjct: 263 QTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPD 322
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED 515
+ I +V T M + D+VDL + +GAE++ +C+EAG+ A+R++
Sbjct: 323 RRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKN 375
Score = 328 (120.5 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 78/230 (33%), Positives = 127/230 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + +RE + PL + + +++G+ PRG+LLYGPPGTGKT L +AV A
Sbjct: 152 IGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAA 211
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A ++ P+++FIDEIDA+ +R D +
Sbjct: 212 FIRVVGSEFVQK-YLGEGPRLVRDVFRLARENS----PAIIFIDEIDAIATKRFDAQTGA 266
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ SV +V V+ +TNR D +DPAL R GR D
Sbjct: 267 DREVQRILMELLNQMDGFDVSV-NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQ 325
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I ++ T K+ L VDLE + + GA+++++C+EA M A++++
Sbjct: 326 KRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKN 375
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 82/243 (33%), Positives = 133/243 (54%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G
Sbjct: 170 VDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 229
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PG G+EL Y+G+ L+R F+ A +PSI+F DE
Sbjct: 230 EPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDE 289
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG KR ++S +R + LL ++DG + + V+ ATNR ++D AL+RPGR
Sbjct: 290 IDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGR 349
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + P PD++ R I ++HT M + +DV+L + F+GA+++ +C EAG++A
Sbjct: 350 IDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLA 409
Query: 512 LRE 514
LRE
Sbjct: 410 LRE 412
Score = 322 (118.4 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 79/228 (34%), Positives = 126/228 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG A ++ ++E + PL + + +G+K P+G++LYG PGTGKT L +AV A
Sbjct: 190 IGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSAT 249
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A LS PS+VFIDEIDA+ +R D
Sbjct: 250 FLRVVGSELIQK-YLGDGPKLVRELFRVADD--LS--PSIVFIDEIDAVGTKRYDANSGG 304
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++++DPAL R GR D
Sbjct: 305 EREIQRTMLELLNQ-LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 363
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I +++T K+ L +V+LE + + + GAD++A+C EA + A++
Sbjct: 364 RRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 411
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 86/231 (37%), Positives = 125/231 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +AV P+ H F +GI P +G L++GPPG
Sbjct: 161 EKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLAR 220
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ P+IIF DE D +G KR S
Sbjct: 221 ACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS 280
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPD 462
+ +R + LL ++DG I V+AATNR +D AL+R GR D + P P+
Sbjct: 281 EVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPN 340
Query: 463 LEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALR 513
EAR IL++H+R M V DV+ +A +E F GA+L+ +C EAG++ALR
Sbjct: 341 EEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALR 391
Score = 350 (128.3 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 83/249 (33%), Positives = 143/249 (57%)
Query: 2 ESKGRIMSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYG 60
+S+ + M E +EK E + IGG ++ L E + P+ + + + +G+K P+G+L+YG
Sbjct: 151 DSRVKAM-EIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYG 209
Query: 61 PPGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSV 119
PPGTGKT L RA + + +L + P V + +G+ K +R+AF+ A P++
Sbjct: 210 PPGTGKTLLARACAAQTNSTYLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKG----PTI 264
Query: 120 VFIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPA 178
+FIDE+DA+ +R D D + + L++ +S ++ V+A+TNR+D +DPA
Sbjct: 265 IFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQ-LDGFSSDANIKVIAATNRIDILDPA 323
Query: 179 LRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCR 238
L RSGR D R IL+++++K+ + A+V+ + +A S + GA L+A+C
Sbjct: 324 LLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCV 383
Query: 239 EATMSAVKR 247
EA M A++R
Sbjct: 384 EAGMIALRR 392
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 411 (149.7 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 94/261 (36%), Positives = 140/261 (53%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S R ++ + KVT++D+ G+ + K+++++ VE+ ++ F RLG G LL GP
Sbjct: 139 GRSKARLLSQDQVKVTFDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGP 197
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F +A+ AP IIF DE
Sbjct: 198 PGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEI 257
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG RG E+ L+ LL EMDG E +GI+V+AATNRP +D AL+RPGRF
Sbjct: 258 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRF 317
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + VP PD++ R IL+VH + + DV IA T F+GA+L + EA + A
Sbjct: 318 DRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAA 377
Query: 513 REDISATAVRNRHFQTVKDSL 533
RE+ ++ F+ KD +
Sbjct: 378 RENKKDVSMSE--FERAKDKI 396
Score = 315 (115.9 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 91/253 (35%), Positives = 128/253 (50%)
Query: 3 SKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPP 62
SK R++S+ K ++ G + A E ++EL+ F L + Q+LG K P G+LL GPP
Sbjct: 141 SKARLLSQDQVKVTFDDVAGVDEAK-EEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGPP 198
Query: 63 GTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFI 122
GTGKT L +AV E IS + VG +R+ F QA A P ++FI
Sbjct: 199 GTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQA----PCIIFI 254
Query: 123 DEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
DEIDA+ R H REQ + +QL MD + + ++V+A+TNR D +
Sbjct: 255 DEIDAVGRHRGAGLGGGHDEREQTL---NQLLVEMDGFEGKEG----IIVMAATNRPDVL 307
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
DPAL R GRFD R ILK++ K+PL +V IA G+ GADL
Sbjct: 308 DPALLRPGRFDRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLAN 367
Query: 236 LCREATMSAVKRS 248
+ EA + A + +
Sbjct: 368 IVNEAALFAAREN 380
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 409 (149.0 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 86/230 (37%), Positives = 130/230 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++D+ G+ + K++L + V++ +KH F++LG +G LL G PG
Sbjct: 154 KVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIA 212
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G++ M+VG + +R+ F++ + AP IIF DE D VG RG
Sbjct: 213 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGG 272
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
E+ L+ LL EMDG E +G++++AATNRP +D AL+RPGRFD + + PD+
Sbjct: 273 GNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDING 332
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED 515
R +I+ VH + + + DVDLR IA T F+GA+L L EA ++A R D
Sbjct: 333 REKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLD 382
Score = 338 (124.0 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 98/278 (35%), Positives = 139/278 (50%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ R+M++ K ++ + G A E L E++ F L + + KLG K P+G LL G
Sbjct: 142 KSRARLMTDSRGKVTFDD-VAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGS 199
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E IS + VG +R+ F Q HA P ++F
Sbjct: 200 PGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHA----PCIIF 255
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+DEIDA+ R + REQ + +QL MD + ++ VV++A+TNR D
Sbjct: 256 VDEIDAVGRHRGIGLGGGNDEREQTL---NQLLVEMDGFESNEG----VVIIAATNRPDV 308
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +I+ ++ KKVPL +VDL IA G+ GADL
Sbjct: 309 LDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLA 368
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + VTM D+ +AR V
Sbjct: 369 NLVNEAALIAARLDKKI--------VTMCDFEYARDKV 398
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 409 (149.0 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 86/230 (37%), Positives = 130/230 (56%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++D+ G+ + K++L + V++ +KH F++LG +G LL G PG
Sbjct: 154 KVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIA 212
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G++ M+VG + +R+ F++ + AP IIF DE D VG RG
Sbjct: 213 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGG 272
Query: 406 SITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEA 465
E+ L+ LL EMDG E +G++++AATNRP +D AL+RPGRFD + + PD+
Sbjct: 273 GNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDING 332
Query: 466 RHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVALRED 515
R +I+ VH + + + DVDLR IA T F+GA+L L EA ++A R D
Sbjct: 333 REKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLD 382
Score = 338 (124.0 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 98/278 (35%), Positives = 139/278 (50%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ R+M++ K ++ + G A E L E++ F L + + KLG K P+G LL G
Sbjct: 142 KSRARLMTDSRGKVTFDD-VAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGS 199
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E IS + VG +R+ F Q HA P ++F
Sbjct: 200 PGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHA----PCIIF 255
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+DEIDA+ R + REQ + +QL MD + ++ VV++A+TNR D
Sbjct: 256 VDEIDAVGRHRGIGLGGGNDEREQTL---NQLLVEMDGFESNEG----VVIIAATNRPDV 308
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +I+ ++ KKVPL +VDL IA G+ GADL
Sbjct: 309 LDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLA 368
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + VTM D+ +AR V
Sbjct: 369 NLVNEAALIAARLDKKI--------VTMCDFEYARDKV 398
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 88/256 (34%), Positives = 137/256 (53%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + +T E P V + +IGGL ++L++ +E P+ + F R+
Sbjct: 113 TLTIMRYLPREVDP-LVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRV 171
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GISP +G LL+GPPG + + Y+GES L+R F A
Sbjct: 172 GISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYA 231
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRP 439
R P IIF DE D +G +R +++ +R L LL +MDG + + ++ ATNRP
Sbjct: 232 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRP 291
Query: 440 HAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAE 499
+D AL+RPGR D L +P P+ AR +IL++H + ++D ++ + ++LF GA+
Sbjct: 292 DTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGAD 351
Query: 500 LEGLCREAGIVALRED 515
L +C EAG+ ALR D
Sbjct: 352 LRNICTEAGLFALRCD 367
Score = 334 (122.6 bits), Expect = 8.9e-30, P = 8.9e-30
Identities = 82/228 (35%), Positives = 123/228 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PLL ++G+ P+G LLYGPPGTGKT L RA+ + A+
Sbjct: 144 IGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDAN 203
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 204 FLKVVSSAIVDK-YIGESARLIREMFAYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 258
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ ++ V ++ +TNR D +DPAL R GR D
Sbjct: 259 DREIQRTLMELLNQ-MDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++ + + +D EA+ + + GADL +C EA + A++
Sbjct: 318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALR 365
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 82/243 (33%), Positives = 132/243 (54%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G
Sbjct: 170 VDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 229
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PG G+EL Y+G+ L+R F+ A +PSI+F DE
Sbjct: 230 EPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDE 289
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGR 451
D VG KR + S +R + LL ++DG + + V+ ATNR ++D AL+RPGR
Sbjct: 290 IDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGR 349
Query: 452 FDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVA 511
D + P PD++ R I ++HT M + +DV+L + F+GA+++ +C EAG++A
Sbjct: 350 IDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLA 409
Query: 512 LRE 514
LRE
Sbjct: 410 LRE 412
Score = 324 (119.1 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 79/228 (34%), Positives = 126/228 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG A ++ ++E + PL + + +G+K P+G++LYG PGTGKT L +AV A
Sbjct: 190 IGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSAT 249
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A LS PS+VFIDEIDA+ +R D
Sbjct: 250 FLRVVGSELIQK-YLGDGPKLVRELFRVADD--LS--PSIVFIDEIDAVGTKRYDAHSGG 304
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++++DPAL R GR D
Sbjct: 305 EREIQRTMLELLNQ-LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 363
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I +++T K+ L +V+LE + + + GAD++A+C EA + A++
Sbjct: 364 RRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 411
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 97/315 (30%), Positives = 159/315 (50%)
Query: 208 KKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRH 267
+ VPL +E + + NG VG+ + +S + R A SV + RH
Sbjct: 73 QSVPLVIGQFMEMVDQN-NGIVGSTTGSNYYVRILSTINREL-LKPSA---SVALH--RH 125
Query: 268 ARSVVG---PSITRGVTV----EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLG 320
+ ++V P +++ E P V++ DIGG K+++++AVE P+ H + ++G
Sbjct: 126 SNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIG 185
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
I P RG LL+GPPG G+E Y+GE ++R+ F+ A+
Sbjct: 186 IDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 245
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPH 440
AP+IIF DE D + R + + + +R+L LL +MDG +Q + V+ ATNR
Sbjct: 246 ENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRAD 305
Query: 441 AIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAEL 500
+D AL+RPGR D + P PD + + +V T M + D+VDL + + AE+
Sbjct: 306 TLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEI 365
Query: 501 EGLCREAGIVALRED 515
+C+EAG+ A+R++
Sbjct: 366 AAICQEAGMHAVRKN 380
Score = 316 (116.3 bits), Expect = 8.9e-28, P = 8.9e-28
Identities = 79/249 (31%), Positives = 131/249 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S ++S+ + + IGG + +RE + PL + +++G+ PRG+LLYGP
Sbjct: 138 DSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGP 197
Query: 62 PGTGKTSLVRAVVREC-GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L +AV A + V+ V K ++GE + +R+ F A +A P+++
Sbjct: 198 PGTGKTMLAKAVANHTTAAFIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENA----PAII 252
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ R D + D + L L++ +V +V V+ +TNR D +DPAL
Sbjct: 253 FIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTV-NVKVIMATNRADTLDPAL 311
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
R GR D + + ++ T K+ L VDLE + + A++ A+C+E
Sbjct: 312 LRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQE 371
Query: 240 ATMSAVKRS 248
A M AV+++
Sbjct: 372 AGMHAVRKN 380
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 410 (149.4 bits), Expect = 8.2e-38, P = 8.2e-38
Identities = 93/261 (35%), Positives = 138/261 (52%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S R ++ E K T+ D+ G + K+ + + V++ ++ + F +LG G LL G
Sbjct: 137 GKSKARQLSEEQIKTTFADVAGCDEAKEDVAELVDY-LREPSRFQKLGGRIPSGILLVGQ 195
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AAP IIF DE
Sbjct: 196 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEI 255
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAIDAALMRPGRF 452
D VG +RG E+ L+ +L EMDG E +G++V+AATNRP +D AL+RPGRF
Sbjct: 256 DAVGRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRF 315
Query: 453 DLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFTGAELEGLCREAGIVAL 512
D + V PD+ R +IL+VH R + +GDDV IA T F+GA+L L EA + A
Sbjct: 316 DRQVTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAA 375
Query: 513 REDISATAVRNRHFQTVKDSL 533
R + V + F KD +
Sbjct: 376 RT--ARRVVSMKEFDAAKDKI 394
Score = 321 (118.1 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 93/252 (36%), Positives = 130/252 (51%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK R +SE K + G + A E + EL+ + L S+ QKLG + P G+LL G
Sbjct: 138 KSKARQLSEEQIKTTFADVAGCDEAK-EDVAELVDY-LREPSRFQKLGGRIPSGILLVGQ 195
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L +A+ E IS + VG +R+ F QA A P ++F
Sbjct: 196 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAA----PCIIF 251
Query: 122 IDEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ +R H REQ + +Q+ MD + ++ V+V+A+TNR D
Sbjct: 252 IDEIDAVGRQRGAGMGGGHDEREQTL---NQMLVEMDGFEGNEG----VIVIAATNRPDV 304
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +ILK++ +KVPL +V E IA G+ GADL
Sbjct: 305 LDPALLRPGRFDRQVTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLA 364
Query: 235 ALCREATMSAVK 246
L EA + A +
Sbjct: 365 NLVNEAALCAAR 376
Score = 38 (18.4 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 17/74 (22%), Positives = 29/74 (39%)
Query: 462 DLEARHEILRVHTRNMKVGDDVDLRSIAEET-ELFTGAELEGLCREAGIVALREDISATA 520
D+E I R + + + AEE E+F G + A D +
Sbjct: 494 DIERATNIARKMVTQWGLSEKMGPMLFAEEEGEVFLGRTSAKSLHMSDETAKTIDEEIKS 553
Query: 521 VRNRHFQTVKDSLK 534
V +R++Q +D +K
Sbjct: 554 VISRNYQRAEDLIK 567
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 405 (147.6 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 97/237 (40%), Positives = 135/237 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 422 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 481
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +PS++F DEID L P R
Sbjct: 482 QGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPSIIFFDEIDGLAPVR 536
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 537 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 592
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EILK++T+ P ++ LE +A +C GY GAD++++C EA + A++R
Sbjct: 593 SLPDKDARKEILKIHTRDWNPKPLDMFLEELAENCVGYCGADIKSICSEAALCALRR 649
Score = 351 (128.6 bits), Expect = 9.8e-29, P = 9.8e-29
Identities = 90/252 (35%), Positives = 129/252 (51%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL + L++ V +P+ + F + I P RG
Sbjct: 400 RMKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 459
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 460 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 519
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAATNRPHAI 442
PSIIFFDE D + R SS + ++STLL MDGL+ I+V+ ATNR +I
Sbjct: 520 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSI 576
Query: 443 DAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGD-DVDLRSIAEETELFTGAELE 501
D AL RPGRFD PD +AR EIL++HTR+ D+ L +AE + GA+++
Sbjct: 577 DPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDMFLEELAENCVGYCGADIK 636
Query: 502 GLCREAGIVALR 513
+C EA + ALR
Sbjct: 637 SICSEAALCALR 648
Score = 51 (23.0 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 409 VGERLLSTLLTEMDGLEQAKGILVLAATNRPHA 441
VG L +T T + + +L+LA +++PH+
Sbjct: 865 VGPTLKATFTTLLQNIPSFAPVLLLATSDKPHS 897
Score = 39 (18.8 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 232 DLEALCREATMSAVKRSSDANECA 255
D E LC E S KR +++ A
Sbjct: 1092 DFEQLCEEIQESRKKRGCSSSKYA 1115
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 412 (150.1 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 99/277 (35%), Positives = 146/277 (52%)
Query: 257 VLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAF 316
VLS+ +E +++ GP + E V + D+ G + K +LQ+ VE+ + + F
Sbjct: 283 VLSIVLETTGVLKNIKGPH-SNEAQPEHQTVRFSDVHGCDEAKDELQELVEF-LLNPERF 340
Query: 317 SRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTF 376
S LG +G LL GPPG G+E +YVG +R F
Sbjct: 341 SSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELF 400
Query: 377 QRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKGILVLAAT 436
+AR +P+IIF DE D +GAKR + + ++ L+ LLTE+DG Q+ G+++LAAT
Sbjct: 401 NQARSKSPAIIFIDELDAIGAKRNERDAAYV---KQTLNQLLTELDGFSQSTGVIILAAT 457
Query: 437 NRPHAIDAALMRPGRFDLVLYVPPPDLEARHEILRVHTRNMKVGDDVDLRSIAEETELFT 496
N P +D AL RPGRFD + V PD+ R +IL+ H +N+++ DVD+ IA T F+
Sbjct: 458 NYPELLDKALTRPGRFDRKVVVDLPDVRGRMDILKHHMKNVQISTDVDVAVIARGTSGFS 517
Query: 497 GAELEGLCREAGIVALREDISATAVRNRHFQTVKDSL 533
GA+LE L +A I A R S V + F KD +
Sbjct: 518 GADLENLVNQAAIFASRNKQSK--VTPKDFDYAKDKI 552
Score = 336 (123.3 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 86/225 (38%), Positives = 124/225 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+ G A + L+EL+ F LL + LG K P+G+LL GPPGTGKT L RAV E G
Sbjct: 317 VHGCDEAKDELQELVEF-LLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVP 375
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+S + +VG K +RE F+QA S + P+++FIDE+DA+ +R+ R V
Sbjct: 376 FFYMSGSEFDEVYVGVGAKRVRELFNQARSKS----PAIIFIDELDAIGAKRNERDAAYV 431
Query: 141 R-IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
+ +QL T +D S T V +++A+TN + +D AL R GRFD R
Sbjct: 432 KQTLNQLLTELDGFSQS-TGV---IILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGR 487
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
+ILK + K V + +VD+ IA +G+ GADLE L +A + A
Sbjct: 488 MDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFA 532
WARNING: HSPs involving 453 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 611 552 0.00097 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 703
No. of states in DFA: 619 (66 KB)
Total size of DFA: 276 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.17u 0.11s 43.28t Elapsed: 00:00:02
Total cpu time: 43.25u 0.11s 43.36t Elapsed: 00:00:02
Start: Tue May 21 14:01:24 2013 End: Tue May 21 14:01:26 2013
WARNINGS ISSUED: 2