Query 007257
Match_columns 611
No_of_seqs 196 out of 2049
Neff 10.0
Searched_HMMs 46136
Date Thu Mar 28 21:06:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007257.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007257hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 3.2E-84 6.9E-89 664.6 61.3 601 2-607 84-690 (691)
2 PLN02614 long-chain acyl-CoA s 100.0 1E-83 2.2E-88 709.7 68.4 605 2-607 54-659 (666)
3 PLN02861 long-chain-fatty-acid 100.0 1E-81 2.2E-86 694.7 68.2 605 2-608 52-657 (660)
4 PLN02430 long-chain-fatty-acid 100.0 3.3E-81 7.2E-86 689.1 68.5 608 2-609 51-658 (660)
5 PLN02736 long-chain acyl-CoA s 100.0 2.2E-81 4.8E-86 693.3 66.6 595 2-606 53-650 (651)
6 PLN02387 long-chain-fatty-acid 100.0 7.9E-78 1.7E-82 666.3 65.1 597 2-604 67-696 (696)
7 PTZ00342 acyl-CoA synthetase; 100.0 3.5E-77 7.7E-82 655.6 65.7 586 2-605 70-745 (746)
8 COG1022 FAA1 Long-chain acyl-C 100.0 8E-77 1.7E-81 620.9 57.2 578 2-607 25-611 (613)
9 KOG1180 Acyl-CoA synthetase [L 100.0 1.1E-76 2.3E-81 580.9 50.9 575 22-605 84-677 (678)
10 PTZ00216 acyl-CoA synthetase; 100.0 9E-76 1.9E-80 651.6 64.1 591 2-605 78-699 (700)
11 KOG1176 Acyl-CoA synthetase [L 100.0 5E-76 1.1E-80 610.7 44.1 493 6-597 29-532 (537)
12 COG0365 Acs Acyl-coenzyme A sy 100.0 4.9E-74 1.1E-78 592.3 46.5 486 6-597 23-522 (528)
13 KOG1177 Long chain fatty acid 100.0 3.4E-73 7.3E-78 547.4 39.9 498 3-599 60-589 (596)
14 COG0318 CaiC Acyl-CoA syntheta 100.0 3.7E-71 8.1E-76 595.6 46.5 495 2-597 20-527 (534)
15 PRK08180 feruloyl-CoA synthase 100.0 2.8E-68 6E-73 585.4 55.7 530 2-607 48-606 (614)
16 PTZ00237 acetyl-CoA synthetase 100.0 1.8E-69 3.8E-74 595.9 45.8 515 6-596 74-622 (647)
17 PLN02654 acetate-CoA ligase 100.0 2.5E-68 5.4E-73 588.7 49.5 509 5-597 101-640 (666)
18 PRK12582 acyl-CoA synthetase; 100.0 3.1E-67 6.7E-72 578.2 55.1 528 2-606 58-616 (624)
19 PLN02860 o-succinylbenzoate-Co 100.0 6.1E-68 1.3E-72 577.8 46.3 516 2-602 16-559 (563)
20 TIGR02316 propion_prpE propion 100.0 1.4E-67 3E-72 581.4 48.5 514 2-596 61-603 (628)
21 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2.8E-67 6E-72 579.9 49.3 507 2-597 66-602 (625)
22 PRK06334 long chain fatty acid 100.0 6.4E-67 1.4E-71 565.7 47.2 486 2-597 28-535 (539)
23 COG1021 EntE Peptide arylation 100.0 2.4E-68 5.1E-73 502.3 27.9 491 1-597 36-538 (542)
24 PRK07529 AMP-binding domain pr 100.0 3.1E-66 6.8E-71 570.2 49.2 509 2-597 34-570 (632)
25 PRK00174 acetyl-CoA synthetase 100.0 4.3E-66 9.3E-71 571.3 50.4 507 2-597 76-610 (637)
26 PRK07788 acyl-CoA synthetase; 100.0 7.7E-67 1.7E-71 568.4 43.1 487 2-594 58-548 (549)
27 PRK04319 acetyl-CoA synthetase 100.0 6.2E-66 1.3E-70 563.2 48.3 494 5-595 56-557 (570)
28 PRK10524 prpE propionyl-CoA sy 100.0 1.6E-65 3.4E-70 566.4 47.7 513 2-596 62-604 (629)
29 PRK03584 acetoacetyl-CoA synth 100.0 4.1E-65 8.8E-70 564.9 47.9 503 5-596 96-624 (655)
30 PRK13295 cyclohexanecarboxylat 100.0 5.7E-65 1.2E-69 553.1 47.5 495 2-597 33-544 (547)
31 TIGR01217 ac_ac_CoA_syn acetoa 100.0 5.3E-65 1.1E-69 561.4 47.5 503 5-596 96-625 (652)
32 PLN03052 acetate--CoA ligase; 100.0 3.5E-64 7.5E-69 556.9 49.5 508 4-599 186-723 (728)
33 PRK09274 peptide synthase; Pro 100.0 2.5E-64 5.5E-69 549.2 47.6 495 2-599 15-550 (552)
34 PRK05857 acyl-CoA synthetase; 100.0 1.4E-64 2.9E-69 548.7 43.9 498 2-597 23-531 (540)
35 PLN02574 4-coumarate--CoA liga 100.0 4.4E-64 9.5E-69 547.2 47.2 496 4-597 50-554 (560)
36 PRK13382 acyl-CoA synthetase; 100.0 6.4E-64 1.4E-68 543.1 44.6 481 2-593 52-536 (537)
37 PRK03640 O-succinylbenzoic aci 100.0 2.2E-63 4.8E-68 533.4 46.6 467 2-597 11-482 (483)
38 PRK05677 long-chain-fatty-acid 100.0 2.4E-63 5.2E-68 541.9 47.5 502 2-598 33-558 (562)
39 PRK06839 acyl-CoA synthetase; 100.0 1.8E-63 3.8E-68 536.1 45.2 478 2-597 11-495 (496)
40 PLN02246 4-coumarate--CoA liga 100.0 3.8E-63 8.3E-68 537.8 47.6 493 2-596 32-535 (537)
41 PRK07638 acyl-CoA synthetase; 100.0 2.9E-63 6.2E-68 532.6 46.0 467 2-597 10-481 (487)
42 PRK08314 long-chain-fatty-acid 100.0 3.3E-63 7.1E-68 540.1 46.9 500 2-597 19-542 (546)
43 PRK05605 long-chain-fatty-acid 100.0 3.1E-63 6.7E-68 542.9 46.2 506 2-599 41-571 (573)
44 PLN03102 acyl-activating enzym 100.0 3E-63 6.5E-68 541.7 45.8 515 2-605 23-563 (579)
45 PRK05852 acyl-CoA synthetase; 100.0 2.8E-63 6.1E-68 538.5 43.8 494 2-597 25-532 (534)
46 PRK06155 crotonobetaine/carnit 100.0 7E-63 1.5E-67 535.3 46.8 486 2-595 30-522 (542)
47 PRK06060 acyl-CoA synthetase; 100.0 2.4E-63 5.3E-68 554.9 43.6 464 6-596 19-491 (705)
48 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.2E-62 2.6E-67 534.1 45.8 490 2-592 31-537 (538)
49 PRK08008 caiC putative crotono 100.0 1.5E-62 3.3E-67 531.3 45.6 493 2-592 16-517 (517)
50 TIGR03443 alpha_am_amid L-amin 100.0 2.5E-63 5.4E-68 594.6 43.0 528 2-601 245-832 (1389)
51 PRK07008 long-chain-fatty-acid 100.0 3.8E-62 8.2E-67 529.8 48.3 498 2-597 19-533 (539)
52 PRK05620 long-chain-fatty-acid 100.0 1.8E-62 4E-67 536.6 45.6 508 2-598 19-558 (576)
53 PRK06187 long-chain-fatty-acid 100.0 2.7E-62 5.8E-67 530.5 46.4 496 2-597 15-519 (521)
54 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2E-62 4.3E-67 531.0 44.9 484 2-592 32-527 (527)
55 PRK08316 acyl-CoA synthetase; 100.0 2.4E-62 5.2E-67 531.0 45.6 496 2-600 20-522 (523)
56 PRK07656 long-chain-fatty-acid 100.0 3.2E-62 7E-67 528.7 46.0 490 2-593 14-512 (513)
57 PRK07786 long-chain-fatty-acid 100.0 4E-62 8.6E-67 530.3 46.4 492 2-599 26-526 (542)
58 PRK06087 short chain acyl-CoA 100.0 9.6E-62 2.1E-66 528.3 48.5 497 2-601 32-540 (547)
59 PRK07470 acyl-CoA synthetase; 100.0 3.7E-62 8E-67 529.5 44.7 490 2-597 16-518 (528)
60 PLN02330 4-coumarate--CoA liga 100.0 9.9E-62 2.1E-66 527.6 47.1 494 1-598 36-542 (546)
61 PRK08043 bifunctional acyl-[ac 100.0 4.6E-62 1E-66 544.8 45.2 480 2-597 213-713 (718)
62 KOG1175 Acyl-CoA synthetase [L 100.0 2.5E-62 5.4E-67 505.3 38.3 497 6-598 78-603 (626)
63 PRK07514 malonyl-CoA synthase; 100.0 3.2E-61 7E-66 519.5 47.0 485 2-598 12-502 (504)
64 PRK07769 long-chain-fatty-acid 100.0 5.1E-62 1.1E-66 538.2 40.7 502 2-606 30-624 (631)
65 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.1E-61 6.6E-66 521.2 45.5 489 2-593 9-514 (515)
66 PRK06145 acyl-CoA synthetase; 100.0 4.7E-61 1E-65 517.2 46.1 479 2-596 11-496 (497)
67 PRK12583 acyl-CoA synthetase; 100.0 4.2E-61 9.2E-66 525.1 46.1 496 2-599 27-554 (558)
68 PRK10946 entE enterobactin syn 100.0 6.2E-61 1.3E-65 519.9 46.7 486 7-599 37-534 (536)
69 PRK06188 acyl-CoA synthetase; 100.0 4.1E-61 8.9E-66 520.8 45.1 487 2-597 21-517 (524)
70 PRK09088 acyl-CoA synthetase; 100.0 5.5E-61 1.2E-65 515.3 45.6 471 2-597 4-485 (488)
71 PRK12492 long-chain-fatty-acid 100.0 4.3E-61 9.4E-66 524.2 44.6 501 2-594 33-561 (562)
72 PRK08633 2-acyl-glycerophospho 100.0 4.2E-61 9.1E-66 568.0 48.1 494 2-598 624-1144(1146)
73 PRK05851 long-chain-fatty-acid 100.0 2.8E-61 6E-66 521.0 40.7 475 2-597 11-522 (525)
74 PRK08315 AMP-binding domain pr 100.0 2.1E-60 4.5E-65 519.6 47.0 497 2-599 25-553 (559)
75 PRK12476 putative fatty-acid-- 100.0 1.2E-60 2.6E-65 525.0 45.0 492 2-597 43-606 (612)
76 PRK06164 acyl-CoA synthetase; 100.0 2.5E-60 5.4E-65 516.6 47.0 497 2-599 19-534 (540)
77 PLN02479 acetate-CoA ligase 100.0 1.7E-60 3.6E-65 519.8 45.6 509 2-597 29-558 (567)
78 PRK07867 acyl-CoA synthetase; 100.0 5.4E-60 1.2E-64 510.8 48.2 472 6-597 16-507 (529)
79 PRK13390 acyl-CoA synthetase; 100.0 2.5E-60 5.4E-65 511.7 45.4 483 2-592 6-501 (501)
80 TIGR02262 benz_CoA_lig benzoat 100.0 3.1E-60 6.8E-65 511.9 45.9 487 3-594 15-508 (508)
81 PRK06018 putative acyl-CoA syn 100.0 3E-60 6.6E-65 515.5 46.0 498 2-597 19-534 (542)
82 PRK13388 acyl-CoA synthetase; 100.0 3.3E-60 7E-65 514.1 46.1 474 5-596 13-505 (540)
83 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.8E-60 3.8E-65 513.5 42.9 476 2-596 9-501 (502)
84 PTZ00297 pantothenate kinase; 100.0 8.8E-59 1.9E-63 528.5 58.8 555 2-608 436-1006(1452)
85 TIGR03205 pimA dicarboxylate-- 100.0 4.4E-60 9.5E-65 514.4 46.0 501 2-592 30-541 (541)
86 PRK12467 peptide synthase; Pro 100.0 4.4E-61 9.6E-66 611.1 42.0 471 2-595 3104-3592(3956)
87 PRK07787 acyl-CoA synthetase; 100.0 5.4E-60 1.2E-64 504.7 43.2 453 3-593 10-469 (471)
88 PRK07059 Long-chain-fatty-acid 100.0 1E-59 2.2E-64 513.4 45.9 501 2-594 32-555 (557)
89 PRK06710 long-chain-fatty-acid 100.0 5.1E-60 1.1E-64 516.4 43.5 501 2-597 33-555 (563)
90 PRK07445 O-succinylbenzoic aci 100.0 4.7E-60 1E-64 499.7 41.2 427 26-600 18-450 (452)
91 PRK08279 long-chain-acyl-CoA s 100.0 3.7E-60 8E-65 520.9 41.4 487 2-598 46-565 (600)
92 PRK08751 putative long-chain f 100.0 1.7E-59 3.6E-64 512.3 45.6 500 2-594 34-557 (560)
93 PRK13383 acyl-CoA synthetase; 100.0 1.3E-59 2.8E-64 507.7 44.1 468 2-592 44-515 (516)
94 PRK10252 entF enterobactin syn 100.0 5.7E-60 1.2E-64 563.8 44.0 471 2-593 467-963 (1296)
95 PRK12467 peptide synthase; Pro 100.0 1.2E-60 2.5E-65 607.3 39.9 490 2-603 1583-2091(3956)
96 PRK13391 acyl-CoA synthetase; 100.0 1E-58 2.3E-63 500.2 48.1 493 2-597 6-509 (511)
97 PRK06178 acyl-CoA synthetase; 100.0 6.8E-59 1.5E-63 507.9 46.7 501 2-597 42-565 (567)
98 PRK12316 peptide synthase; Pro 100.0 2.9E-60 6.4E-65 612.8 42.0 473 2-596 520-1005(5163)
99 PRK04813 D-alanine--poly(phosp 100.0 6.9E-59 1.5E-63 501.4 45.4 474 2-596 11-502 (503)
100 PRK12316 peptide synthase; Pro 100.0 4.3E-60 9.4E-65 611.3 41.7 473 2-595 2012-2502(5163)
101 PRK09029 O-succinylbenzoic aci 100.0 5.9E-59 1.3E-63 495.1 42.3 440 2-598 12-454 (458)
102 PRK08974 long-chain-fatty-acid 100.0 1.8E-58 4E-63 503.8 46.1 504 2-599 32-557 (560)
103 PLN03051 acyl-activating enzym 100.0 5.7E-59 1.2E-63 499.5 39.9 458 59-600 1-494 (499)
104 PRK06814 acylglycerophosphoeth 100.0 1.8E-58 3.8E-63 543.5 47.1 486 2-599 640-1134(1140)
105 PRK08162 acyl-CoA synthetase; 100.0 5.9E-58 1.3E-62 498.5 47.4 496 2-597 27-539 (545)
106 PRK08276 long-chain-fatty-acid 100.0 8.4E-58 1.8E-62 492.4 47.6 480 26-598 10-497 (502)
107 PRK05691 peptide synthase; Val 100.0 5.4E-59 1.2E-63 597.3 43.5 478 2-594 3729-4225(4334)
108 PRK12406 long-chain-fatty-acid 100.0 1.2E-57 2.6E-62 491.9 46.7 481 26-597 10-503 (509)
109 PRK07798 acyl-CoA synthetase; 100.0 2.1E-57 4.7E-62 493.5 48.1 495 2-597 12-532 (533)
110 TIGR01923 menE O-succinylbenzo 100.0 2.4E-57 5.3E-62 480.2 41.4 433 29-591 1-436 (436)
111 PRK05691 peptide synthase; Val 100.0 5.6E-58 1.2E-62 588.0 42.4 469 2-593 1140-1624(4334)
112 PRK05850 acyl-CoA synthetase; 100.0 9.3E-57 2E-61 492.3 43.6 500 2-597 10-568 (578)
113 PRK07868 acyl-CoA synthetase; 100.0 1.7E-56 3.7E-61 511.4 43.8 478 2-594 456-955 (994)
114 PRK09192 acyl-CoA synthetase; 100.0 3.9E-56 8.4E-61 486.7 43.4 484 3-597 31-566 (579)
115 PRK07768 long-chain-fatty-acid 100.0 7.5E-55 1.6E-59 474.0 44.8 484 2-596 11-544 (545)
116 PRK08308 acyl-CoA synthetase; 100.0 1.7E-54 3.7E-59 454.2 42.5 397 26-592 7-408 (414)
117 PF00501 AMP-binding: AMP-bind 100.0 6.7E-55 1.5E-59 458.8 32.2 400 1-472 3-416 (417)
118 KOG1179 Very long-chain acyl-C 100.0 1E-52 2.3E-57 414.3 33.5 489 1-594 85-610 (649)
119 TIGR01733 AA-adenyl-dom amino 100.0 2.1E-51 4.5E-56 431.1 37.5 389 29-498 1-408 (408)
120 PRK07824 O-succinylbenzoic aci 100.0 8.8E-44 1.9E-48 365.8 31.3 317 167-597 31-357 (358)
121 COG1020 EntF Non-ribosomal pep 100.0 1.4E-37 3.1E-42 344.8 34.1 399 2-491 236-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7.8E-37 1.7E-41 312.4 26.1 287 171-587 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 1.5E-33 3.2E-38 295.8 27.0 331 169-589 73-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 9.4E-32 2E-36 282.2 36.5 507 2-603 779-1358(1363)
125 KOG1178 Non-ribosomal peptide 100.0 2E-29 4.3E-34 274.0 24.2 496 2-595 45-577 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 2.6E-27 5.7E-32 248.5 28.7 260 169-491 84-353 (445)
127 COG1541 PaaK Coenzyme F390 syn 99.9 5.9E-24 1.3E-28 211.3 27.0 284 168-516 87-385 (438)
128 TIGR03089 conserved hypothetic 99.9 1.4E-24 3E-29 205.7 21.3 220 2-265 5-227 (227)
129 KOG3628 Predicted AMP-binding 99.8 3.8E-18 8.2E-23 180.7 26.6 493 4-597 105-704 (1363)
130 TIGR02304 aden_form_hyp probab 99.8 1.9E-16 4.2E-21 162.4 28.8 259 173-515 101-379 (430)
131 PRK09188 serine/threonine prot 99.8 1.1E-18 2.5E-23 174.6 10.5 115 441-596 206-327 (365)
132 PF04443 LuxE: Acyl-protein sy 98.9 1.1E-07 2.3E-12 96.0 20.1 235 169-470 87-352 (365)
133 PF13193 AMP-binding_C: AMP-bi 98.7 1.5E-08 3.3E-13 77.2 5.3 68 482-585 1-73 (73)
134 PF03321 GH3: GH3 auxin-respon 98.6 1.3E-06 2.8E-11 93.3 15.4 161 333-516 266-452 (528)
135 PLN02249 indole-3-acetic acid- 98.1 0.00032 6.8E-09 75.4 19.7 136 331-489 299-456 (597)
136 PLN02247 indole-3-acetic acid- 97.9 0.00089 1.9E-08 71.4 19.7 141 330-489 289-463 (606)
137 PLN02620 indole-3-acetic acid- 97.8 0.0032 6.9E-08 67.2 21.5 165 330-513 300-503 (612)
138 PF14535 AMP-binding_C_2: AMP- 97.1 0.0025 5.5E-08 51.2 7.7 88 475-588 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 94.3 0.28 6E-06 50.4 9.6 89 26-115 108-198 (438)
140 TIGR03335 F390_ftsA coenzyme F 84.1 8 0.00017 40.9 10.6 89 20-111 96-188 (445)
141 TIGR02155 PA_CoA_ligase phenyl 83.0 8.2 0.00018 40.5 10.1 94 19-113 84-181 (422)
142 PRK06187 long-chain-fatty-acid 82.7 20 0.00044 38.4 13.4 119 7-131 166-290 (521)
143 TIGR01923 menE O-succinylbenzo 81.5 17 0.00037 38.0 12.0 114 7-129 110-226 (436)
144 PRK07656 long-chain-fatty-acid 81.4 18 0.00039 38.9 12.4 104 6-115 164-271 (513)
145 PF00501 AMP-binding: AMP-bind 78.7 16 0.00035 38.0 10.6 122 6-133 153-288 (417)
146 PRK08315 AMP-binding domain pr 77.5 26 0.00055 38.2 12.1 102 7-113 198-303 (559)
147 PRK06334 long chain fatty acid 76.6 37 0.0008 36.9 12.9 121 6-131 181-308 (539)
148 TIGR01733 AA-adenyl-dom amino 76.0 46 0.001 34.3 13.1 121 7-132 119-244 (408)
149 PRK03640 O-succinylbenzoic aci 74.8 50 0.0011 35.1 13.3 104 6-115 139-245 (483)
150 PRK12583 acyl-CoA synthetase; 74.0 39 0.00083 36.8 12.4 102 7-113 200-305 (558)
151 PLN03051 acyl-activating enzym 71.7 41 0.00088 36.1 11.7 104 7-115 118-224 (499)
152 TIGR03098 ligase_PEP_1 acyl-Co 70.5 82 0.0018 33.7 13.8 93 19-115 170-265 (515)
153 PRK04319 acetyl-CoA synthetase 69.8 52 0.0011 36.0 12.2 104 7-115 204-311 (570)
154 KOG1176 Acyl-CoA synthetase [L 68.4 38 0.00083 36.6 10.2 94 188-282 43-138 (537)
155 PLN02860 o-succinylbenzoate-Co 67.7 49 0.0011 36.1 11.4 103 6-114 170-275 (563)
156 PRK07788 acyl-CoA synthetase; 65.8 68 0.0015 34.8 12.0 120 7-132 206-333 (549)
157 PRK07008 long-chain-fatty-acid 65.5 51 0.0011 35.7 11.0 104 7-114 175-282 (539)
158 TIGR03443 alpha_am_amid L-amin 65.4 68 0.0015 39.6 13.1 121 7-132 414-539 (1389)
159 PRK08043 bifunctional acyl-[ac 65.0 88 0.0019 35.5 13.0 103 6-113 363-469 (718)
160 PLN03052 acetate--CoA ligase; 64.3 67 0.0014 36.5 11.8 104 7-115 355-461 (728)
161 TIGR02370 pyl_corrinoid methyl 63.9 1E+02 0.0023 28.3 11.0 60 217-276 85-148 (197)
162 PF09580 Spore_YhcN_YlaJ: Spor 63.5 7.2 0.00016 35.2 3.2 33 480-513 77-109 (177)
163 PRK07638 acyl-CoA synthetase; 63.0 1E+02 0.0022 32.8 12.6 101 10-116 145-248 (487)
164 PRK03584 acetoacetyl-CoA synth 62.9 81 0.0018 35.2 12.2 104 7-114 262-370 (655)
165 PLN02736 long-chain acyl-CoA s 62.4 98 0.0021 34.6 12.7 105 169-278 57-165 (651)
166 PRK06188 acyl-CoA synthetase; 62.3 98 0.0021 33.3 12.4 103 7-115 167-271 (524)
167 TIGR02262 benz_CoA_lig benzoat 61.5 67 0.0015 34.4 10.9 104 6-113 159-266 (508)
168 PRK06164 acyl-CoA synthetase; 60.8 69 0.0015 34.6 11.0 102 7-114 180-284 (540)
169 KOG1177 Long chain fatty acid 60.7 74 0.0016 33.3 9.8 104 6-114 232-339 (596)
170 TIGR03089 conserved hypothetic 60.4 49 0.0011 31.2 8.4 54 45-100 171-226 (227)
171 PRK13295 cyclohexanecarboxylat 58.7 1.5E+02 0.0033 32.1 13.1 103 6-114 195-301 (547)
172 PLN02246 4-coumarate--CoA liga 57.8 1.2E+02 0.0026 32.8 12.1 106 6-114 177-287 (537)
173 PRK05852 acyl-CoA synthetase; 57.6 1.9E+02 0.0042 31.2 13.7 94 19-115 185-283 (534)
174 PRK08308 acyl-CoA synthetase; 56.8 1.4E+02 0.003 30.9 12.1 102 6-113 99-204 (414)
175 PRK07529 AMP-binding domain pr 56.6 1.6E+02 0.0034 32.8 13.0 121 6-131 211-342 (632)
176 PRK08314 long-chain-fatty-acid 55.3 1.1E+02 0.0024 33.1 11.4 103 6-114 188-294 (546)
177 TIGR02316 propion_prpE propion 54.1 1.3E+02 0.0028 33.4 11.8 121 7-132 231-364 (628)
178 PRK10252 entF enterobactin syn 54.0 1.4E+02 0.003 36.6 13.0 123 6-133 596-728 (1296)
179 PRK08279 long-chain-acyl-CoA s 54.0 1.7E+02 0.0037 32.2 12.7 102 7-114 198-303 (600)
180 PRK08633 2-acyl-glycerophospho 53.7 1.5E+02 0.0032 35.8 13.0 105 6-115 780-888 (1146)
181 PLN03102 acyl-activating enzym 53.5 95 0.0021 34.0 10.5 97 169-277 27-125 (579)
182 TIGR01217 ac_ac_CoA_syn acetoa 53.4 1.3E+02 0.0028 33.6 11.7 102 8-113 264-370 (652)
183 PLN02654 acetate-CoA ligase 52.9 1.6E+02 0.0034 33.1 12.2 104 7-115 274-385 (666)
184 PLN02565 cysteine synthase 52.9 95 0.0021 31.1 9.4 72 36-107 49-121 (322)
185 COG0318 CaiC Acyl-CoA syntheta 52.1 2E+02 0.0044 31.1 12.7 108 6-116 169-281 (534)
186 PRK09274 peptide synthase; Pro 51.8 76 0.0016 34.5 9.4 100 169-271 19-121 (552)
187 PRK08316 acyl-CoA synthetase; 51.3 1.8E+02 0.0038 31.2 12.1 102 8-115 171-276 (523)
188 PRK06839 acyl-CoA synthetase; 50.5 2.8E+02 0.006 29.4 13.4 104 6-115 147-254 (496)
189 PRK05620 long-chain-fatty-acid 50.1 1.7E+02 0.0036 32.1 11.8 105 6-113 179-286 (576)
190 PTZ00237 acetyl-CoA synthetase 49.7 1.1E+02 0.0024 34.2 10.3 96 170-271 75-172 (647)
191 PRK10946 entE enterobactin syn 49.1 2.2E+02 0.0047 30.8 12.4 104 6-115 180-288 (536)
192 TIGR02275 DHB_AMP_lig 2,3-dihy 48.8 2.6E+02 0.0056 30.1 12.9 103 6-114 181-288 (527)
193 PRK07470 acyl-CoA synthetase; 48.4 2.6E+02 0.0056 30.0 12.9 107 6-115 161-270 (528)
194 PRK11761 cysM cysteine synthas 47.0 1.2E+02 0.0026 29.9 9.1 76 29-107 41-117 (296)
195 TIGR02188 Ac_CoA_lig_AcsA acet 46.8 1.2E+02 0.0026 33.6 10.1 99 169-273 70-170 (625)
196 TIGR01734 D-ala-DACP-lig D-ala 46.6 3E+02 0.0064 29.3 12.9 102 7-113 140-246 (502)
197 cd02070 corrinoid_protein_B12- 46.2 2.4E+02 0.0052 25.9 10.5 59 217-275 83-145 (201)
198 TIGR03208 cyc_hxne_CoA_lg cycl 46.2 3E+02 0.0064 29.7 12.9 102 6-113 193-298 (538)
199 PTZ00342 acyl-CoA synthetase; 45.6 1.9E+02 0.0042 32.9 11.5 105 169-278 74-192 (746)
200 PRK13383 acyl-CoA synthetase; 45.4 2.7E+02 0.0059 29.8 12.4 96 19-115 183-280 (516)
201 PRK13388 acyl-CoA synthetase; 45.1 2.1E+02 0.0045 31.0 11.5 102 6-113 148-253 (540)
202 cd02069 methionine_synthase_B1 43.8 2.7E+02 0.0059 25.9 10.7 92 215-352 87-185 (213)
203 TIGR02898 spore_YhcN_YlaJ spor 43.7 1.3E+02 0.0028 26.6 7.5 31 481-512 57-87 (158)
204 PLN02556 cysteine synthase/L-3 43.6 1.4E+02 0.003 30.7 9.0 64 44-107 101-165 (368)
205 PRK00174 acetyl-CoA synthetase 43.4 1.5E+02 0.0031 33.1 10.1 99 169-273 80-180 (637)
206 PRK07787 acyl-CoA synthetase; 42.5 2.6E+02 0.0057 29.5 11.6 101 7-114 127-231 (471)
207 cd01445 TST_Repeats Thiosulfat 42.5 65 0.0014 27.6 5.6 41 38-78 81-124 (138)
208 PRK06814 acylglycerophosphoeth 42.2 4E+02 0.0087 32.1 14.3 104 6-114 791-898 (1140)
209 PRK06155 crotonobetaine/carnit 41.9 3.2E+02 0.0069 29.6 12.3 103 6-114 178-283 (542)
210 PLN02387 long-chain-fatty-acid 41.5 1.9E+02 0.0041 32.7 10.6 87 189-278 105-193 (696)
211 PRK07514 malonyl-CoA synthase; 40.7 1.9E+02 0.0041 30.8 10.3 87 189-278 27-115 (504)
212 COG4009 Uncharacterized protei 40.7 88 0.0019 23.5 5.0 65 27-102 9-76 (88)
213 TIGR01139 cysK cysteine syntha 40.3 1.9E+02 0.0041 28.5 9.4 67 41-108 45-112 (298)
214 COG0399 WecE Predicted pyridox 40.1 1.1E+02 0.0023 31.4 7.4 65 38-106 60-129 (374)
215 PLN02614 long-chain acyl-CoA s 39.4 2.8E+02 0.006 31.1 11.5 86 189-277 78-165 (666)
216 PF11142 DUF2917: Protein of u 39.2 98 0.0021 22.4 5.1 34 417-464 25-58 (63)
217 PRK02261 methylaspartate mutas 39.0 2.5E+02 0.0054 24.0 10.6 56 218-273 5-64 (137)
218 TIGR02379 ECA_wecE TDP-4-keto- 38.3 1.1E+02 0.0025 31.4 7.6 16 187-202 189-205 (376)
219 PF01037 AsnC_trans_reg: AsnC 38.3 1.6E+02 0.0034 21.5 7.6 37 478-515 10-46 (74)
220 PLN00011 cysteine synthase 38.3 2.1E+02 0.0045 28.7 9.3 71 37-108 52-124 (323)
221 PRK05605 long-chain-fatty-acid 38.0 1.7E+02 0.0037 31.9 9.5 85 190-277 57-143 (573)
222 PF01041 DegT_DnrJ_EryC1: DegT 37.8 81 0.0018 32.2 6.5 65 39-107 52-121 (363)
223 PRK08008 caiC putative crotono 37.7 2.2E+02 0.0048 30.4 10.2 102 169-277 20-123 (517)
224 PRK05857 acyl-CoA synthetase; 37.6 1.5E+02 0.0033 32.0 9.0 95 169-273 27-123 (540)
225 PLN03013 cysteine synthase 37.6 2E+02 0.0042 30.2 9.0 78 29-108 152-230 (429)
226 PRK07445 O-succinylbenzoic aci 37.5 3.2E+02 0.0069 28.8 11.2 102 6-114 118-222 (452)
227 PLN02574 4-coumarate--CoA liga 37.1 1.8E+02 0.004 31.6 9.5 100 169-277 52-153 (560)
228 PRK11706 TDP-4-oxo-6-deoxy-D-g 36.8 1.3E+02 0.0028 30.9 7.8 12 95-106 88-99 (375)
229 PRK06087 short chain acyl-CoA 36.5 4.4E+02 0.0095 28.4 12.4 98 7-110 186-287 (547)
230 TIGR03590 PseG pseudaminic aci 36.0 2E+02 0.0044 28.0 8.7 91 35-134 18-113 (279)
231 TIGR01136 cysKM cysteine synth 35.8 2.4E+02 0.0052 27.8 9.2 71 37-108 42-113 (299)
232 PRK07798 acyl-CoA synthetase; 35.7 2.5E+02 0.0054 30.0 10.3 87 189-278 27-115 (533)
233 PRK05850 acyl-CoA synthetase; 35.4 2.6E+02 0.0056 30.5 10.4 104 169-278 14-124 (578)
234 PF08734 GYD: GYD domain; Int 35.0 2.2E+02 0.0048 22.3 7.4 65 31-95 16-90 (91)
235 PRK07786 long-chain-fatty-acid 34.9 5.2E+02 0.011 27.8 12.6 103 8-115 174-281 (542)
236 PRK06145 acyl-CoA synthetase; 34.6 5.8E+02 0.012 27.0 12.9 104 6-115 147-254 (497)
237 PRK10524 prpE propionyl-CoA sy 34.4 2.7E+02 0.0059 30.8 10.5 98 169-272 66-165 (629)
238 COG0031 CysK Cysteine synthase 34.2 2.8E+02 0.0062 27.3 9.0 70 37-107 46-116 (300)
239 PRK06060 acyl-CoA synthetase; 34.2 3.3E+02 0.0072 30.7 11.2 122 7-132 144-270 (705)
240 COG2236 Predicted phosphoribos 34.2 78 0.0017 28.9 4.9 33 26-58 5-37 (192)
241 TIGR01138 cysM cysteine syntha 33.8 2.9E+02 0.0063 27.2 9.4 66 41-107 47-113 (290)
242 PRK07867 acyl-CoA synthetase; 33.7 4E+02 0.0086 28.7 11.4 102 6-113 150-255 (529)
243 PLN02479 acetate-CoA ligase 33.5 3.6E+02 0.0077 29.4 11.1 85 190-277 45-131 (567)
244 PRK13391 acyl-CoA synthetase; 33.3 2.8E+02 0.0062 29.6 10.2 99 169-277 10-110 (511)
245 PRK08276 long-chain-fatty-acid 33.2 1.9E+02 0.0042 30.7 8.8 85 190-277 11-97 (502)
246 PRK13382 acyl-CoA synthetase; 33.1 3.1E+02 0.0067 29.6 10.4 92 19-114 205-299 (537)
247 PRK12406 long-chain-fatty-acid 32.8 3.4E+02 0.0074 28.9 10.7 101 7-113 151-257 (509)
248 COG1022 FAA1 Long-chain acyl-C 32.6 3E+02 0.0066 30.4 9.9 104 4-114 187-294 (613)
249 PRK09088 acyl-CoA synthetase; 32.3 2.6E+02 0.0056 29.6 9.6 95 169-273 8-104 (488)
250 PRK10717 cysteine synthase A; 32.2 2.8E+02 0.0062 27.8 9.2 66 42-108 53-119 (330)
251 COG1167 ARO8 Transcriptional r 31.5 1.4E+02 0.0031 31.7 7.2 74 176-273 158-236 (459)
252 PRK07059 Long-chain-fatty-acid 31.0 2.9E+02 0.0062 30.0 9.8 85 189-276 47-133 (557)
253 PF00818 Ice_nucleation: Ice n 30.6 24 0.00053 17.6 0.6 10 365-374 1-10 (16)
254 PRK10696 tRNA 2-thiocytidine b 30.3 3.4E+02 0.0074 26.1 9.1 71 36-106 12-94 (258)
255 PRK10877 protein disulfide iso 30.3 1E+02 0.0022 29.2 5.3 52 449-505 55-108 (232)
256 PLN02330 4-coumarate--CoA liga 29.4 2.2E+02 0.0048 30.8 8.5 99 169-277 41-141 (546)
257 PRK04813 D-alanine--poly(phosp 29.0 7.1E+02 0.015 26.3 13.7 121 7-132 142-270 (503)
258 PLN02861 long-chain-fatty-acid 28.5 2.8E+02 0.0061 31.0 9.3 87 189-278 76-164 (660)
259 TIGR01137 cysta_beta cystathio 28.4 3.3E+02 0.0071 28.8 9.4 68 39-107 48-116 (454)
260 KOG0023 Alcohol dehydrogenase, 28.1 5.2E+02 0.011 25.9 9.5 63 44-109 174-236 (360)
261 PRK12476 putative fatty-acid-- 27.8 6.1E+02 0.013 27.9 11.8 103 169-277 47-156 (612)
262 cd00640 Trp-synth-beta_II Tryp 27.7 4.2E+02 0.0091 25.0 9.2 67 41-108 39-105 (244)
263 PRK05851 long-chain-fatty-acid 27.3 4.6E+02 0.01 28.1 10.6 95 6-105 150-251 (525)
264 PRK08751 putative long-chain f 27.2 3.9E+02 0.0085 28.9 10.1 106 7-114 207-318 (560)
265 TIGR01501 MthylAspMutase methy 27.2 4E+02 0.0086 22.8 8.8 46 228-273 14-62 (134)
266 cd01449 TST_Repeat_2 Thiosulfa 27.1 1.5E+02 0.0031 24.2 5.2 53 26-78 46-104 (118)
267 PRK02261 methylaspartate mutas 27.1 4E+02 0.0086 22.8 7.9 43 65-107 20-62 (137)
268 PRK07868 acyl-CoA synthetase; 26.7 7.7E+02 0.017 29.3 12.8 104 7-115 605-710 (994)
269 PLN02430 long-chain-fatty-acid 26.6 6E+02 0.013 28.4 11.5 102 170-276 56-161 (660)
270 PRK06018 putative acyl-CoA syn 26.6 3.7E+02 0.008 29.0 9.7 94 19-114 186-283 (542)
271 COG0796 MurI Glutamate racemas 26.1 5.4E+02 0.012 25.0 9.2 95 5-109 27-121 (269)
272 PRK12492 long-chain-fatty-acid 25.7 4.5E+02 0.0096 28.6 10.1 104 8-113 207-321 (562)
273 TIGR00936 ahcY adenosylhomocys 25.6 4.8E+02 0.01 27.1 9.5 83 26-108 5-90 (406)
274 TIGR03595 Obg_CgtA_exten Obg f 25.5 81 0.0018 23.3 2.9 20 39-58 44-63 (69)
275 PRK05677 long-chain-fatty-acid 25.4 4.2E+02 0.0091 28.8 9.9 86 190-277 49-136 (562)
276 PRK12582 acyl-CoA synthetase; 25.3 3E+02 0.0065 30.5 8.8 80 189-271 79-165 (624)
277 KOG0025 Zn2+-binding dehydroge 25.2 3.2E+02 0.0068 26.9 7.3 65 48-112 157-222 (354)
278 PRK10595 SOS cell division inh 25.0 2.5E+02 0.0053 25.0 6.2 36 42-77 71-106 (164)
279 PF09269 DUF1967: Domain of un 24.7 92 0.002 23.0 3.1 29 29-57 34-62 (69)
280 PRK11493 sseA 3-mercaptopyruva 24.5 1.3E+02 0.0029 29.3 5.2 53 26-78 200-257 (281)
281 TIGR03588 PseC UDP-4-keto-6-de 24.5 3.1E+02 0.0066 28.1 8.1 60 42-104 59-126 (380)
282 PRK06702 O-acetylhomoserine am 24.5 3.4E+02 0.0073 28.6 8.3 67 37-107 63-133 (432)
283 cd07050 BMC_EutL_repeat2 ethan 24.4 1.2E+02 0.0027 22.9 3.5 40 41-80 3-43 (87)
284 KOG0330 ATP-dependent RNA heli 24.4 3.1E+02 0.0067 28.1 7.3 76 51-132 299-377 (476)
285 PRK13390 acyl-CoA synthetase; 24.3 4.8E+02 0.01 27.7 9.9 95 169-273 10-106 (501)
286 PRK08162 acyl-CoA synthetase; 24.3 2.7E+02 0.006 30.0 8.1 85 190-277 43-129 (545)
287 PRK11658 UDP-4-amino-4-deoxy-L 24.0 2.8E+02 0.006 28.5 7.6 35 45-82 66-100 (379)
288 PRK07476 eutB threonine dehydr 23.8 3.9E+02 0.0084 26.7 8.4 62 44-108 61-122 (322)
289 COG0365 Acs Acyl-coenzyme A sy 23.2 4E+02 0.0087 28.8 8.7 98 174-277 27-126 (528)
290 PF06543 Lac_bphage_repr: Lact 23.1 61 0.0013 21.7 1.6 26 337-362 22-47 (49)
291 cd06448 L-Ser-dehyd Serine deh 23.0 2.2E+02 0.0048 28.4 6.4 64 44-108 43-106 (316)
292 cd01561 CBS_like CBS_like: Thi 23.0 5.3E+02 0.011 25.2 9.1 66 43-109 43-109 (291)
293 cd01519 RHOD_HSP67B2 Member of 23.0 2E+02 0.0043 22.8 5.2 53 26-78 36-92 (106)
294 COG5012 Predicted cobalamin bi 22.7 6.4E+02 0.014 23.6 9.2 51 228-278 117-170 (227)
295 PRK15407 lipopolysaccharide bi 22.4 2.9E+02 0.0063 29.1 7.5 32 48-82 107-138 (438)
296 PRK06381 threonine synthase; V 22.2 2.6E+02 0.0057 27.8 6.9 66 39-108 53-118 (319)
297 PLN02723 3-mercaptopyruvate su 22.1 1.7E+02 0.0036 29.4 5.3 53 26-78 237-295 (320)
298 PLN02356 phosphateglycerate ki 21.8 5.1E+02 0.011 27.1 8.8 70 37-107 88-158 (423)
299 cd02067 B12-binding B12 bindin 21.5 2.9E+02 0.0063 22.6 6.0 43 66-108 17-59 (119)
300 PF08967 DUF1884: Domain of un 21.3 1.7E+02 0.0036 22.4 3.7 70 31-116 8-77 (85)
301 cd02070 corrinoid_protein_B12- 21.2 6.4E+02 0.014 23.1 10.2 81 27-107 50-141 (201)
302 PF07994 NAD_binding_5: Myo-in 21.0 6.6E+02 0.014 24.8 9.0 72 29-102 127-228 (295)
303 PRK09162 hypoxanthine-guanine 20.8 2.6E+02 0.0056 25.2 5.9 50 26-77 15-64 (181)
304 COG1064 AdhP Zn-dependent alco 20.4 2.5E+02 0.0054 28.3 6.0 60 44-107 159-218 (339)
305 PRK06178 acyl-CoA synthetase; 20.4 8.1E+02 0.018 26.5 10.9 101 7-112 208-312 (567)
306 TIGR02372 4_coum_CoA_lig 4-cou 20.3 9.5E+02 0.021 24.7 12.0 96 10-113 97-198 (386)
307 PRK08180 feruloyl-CoA synthase 20.0 8.2E+02 0.018 26.9 10.9 103 6-113 207-318 (614)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=3.2e-84 Score=664.57 Aligned_cols=601 Identities=48% Similarity=0.799 Sum_probs=546.0
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.+..+|+.+++-.....+ ..++|+++||.|..+++..++..|+..|+++++.|+|++-|++||++..+||...|.+.+|
T Consensus 84 ~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~Vp 162 (691)
T KOG1256|consen 84 SVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVP 162 (691)
T ss_pred chhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEee
Confidence 567899999999884323 5788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEc-chhHHHHhccccc-cccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQ-DKKVKELLSPDCR-SAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGK 159 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~-~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (611)
|...++++.+.++++.+.+.++|++ ++....+.+.... ..+.++.++.++.............+....+|+++...+.
T Consensus 163 lYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~ 242 (691)
T KOG1256|consen 163 LYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFEELGK 242 (691)
T ss_pred cccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHHHHhhcc
Confidence 9999999999999999999999999 5555666665554 3688999999999988877777788888999999999997
Q ss_pred ccCCcC-CCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccC-CCCCCcEEEEecchhhHHHHHHHHH
Q 007257 160 VNEMEI-LPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFED-KMTVDDVYLSFLPLAHILDRVIEEY 237 (611)
Q Consensus 160 ~~~~~~-~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~ 237 (611)
.....+ .+..|+|.|.|.|||||||.||||++||+|+.+.+..+......... .....|++++.+|+.|++.....++
T Consensus 243 ~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~ 322 (691)
T KOG1256|consen 243 KNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVVELY 322 (691)
T ss_pred cccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHHHHHHHHHh
Confidence 666555 48899999999999999999999999999999976543322221111 2234799999999999999999888
Q ss_pred HhhcCceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH-HHHhhcCCCCCc
Q 007257 238 FFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL-AWMNMGYKQREA 316 (611)
Q Consensus 238 ~l~~G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 316 (611)
.+..|+++.+.++|+..+.+.+++.+||.+.++|.+++++-+.+.+...+...+++.+++.++..+. ..+..|-... .
T Consensus 323 ~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~-~ 401 (691)
T KOG1256|consen 323 TFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRS-R 401 (691)
T ss_pred HhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcc-c
Confidence 8899999999999999999999999999999999999999999999999999999999999998877 4455553322 7
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCe
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYS 396 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~ 396 (611)
.+++|++.+.+++..+++++|.+++|++|+++++...++..+|++|+++||+|||++.++...+++. ..+++|.|+|++
T Consensus 402 ~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~~d~-~lgsvG~p~p~~ 480 (691)
T KOG1256|consen 402 DRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLPGDN-VLGSVGPPVPGN 480 (691)
T ss_pred chHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccCCCC-CCCCcCCcccCc
Confidence 9999999999999999999999999999999999999999999999999999999977777777666 569999999999
Q ss_pred eEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCc
Q 007257 397 ELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQG 475 (611)
Q Consensus 397 ~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G 475 (611)
+++++|+++.+....+. .|||+|||++++.||++||+.|.+++ .|||++|||+|+++++|.+.|.||.++++|+++|
T Consensus 481 ~vKL~dvpe~ny~a~~~--~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqG 558 (691)
T KOG1256|consen 481 EVKLVDVPEMNYDADGS--KGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQG 558 (691)
T ss_pred eEEEechHHhCcCcCCC--cceEEEecchhceeccCChHHHhhhhccccccccccceeECCCccEEEEecccceEEcCCC
Confidence 99999998888776654 79999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eecCcHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhC
Q 007257 476 EYVALEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERN 555 (611)
Q Consensus 476 ~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (611)
++|.|+.||+++.+.+.|.+.+|.|.+.+..++|+|+++.+..+.|...++...++.++|.+..+++.+..++.+..+.+
T Consensus 559 EyVaPe~IEniy~~~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~ 638 (691)
T KOG1256|consen 559 EYVAPEKIENIYKRSLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKEN 638 (691)
T ss_pred CccChHHHHHHHhcCCceEEEEEECCcchhcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999888899999999999999999977778999999999999999999999998888
Q ss_pred CCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhhc
Q 007257 556 KLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKLA 607 (611)
Q Consensus 556 ~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~~ 607 (611)
.|..+...+.|++.+.+|+++..-.||+-|++|..|.++|+++||+||+..+
T Consensus 639 ~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~mY~~~~ 690 (691)
T KOG1256|consen 639 GLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDELYKEIK 690 (691)
T ss_pred hccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999754
No 2
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1e-83 Score=709.75 Aligned_cols=605 Identities=50% Similarity=0.913 Sum_probs=495.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+.+....++..+.++++||+||.++++++|++|.+.|+++||+|+|+++|+++|++++|||+++|++++|
T Consensus 54 ~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vp 133 (666)
T PLN02614 54 SVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVP 133 (666)
T ss_pred HHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEE
Confidence 57889999999864100222345678999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++|++++++++|++++....+..........++.++.+++.................+++++.......
T Consensus 134 l~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (666)
T PLN02614 134 LYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGK 213 (666)
T ss_pred ecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccC
Confidence 99999999999999999999999988765544332222222355666665432111000111122345677776543222
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++|+++|+|||||||.||||++||+++...+......+......+..+|++++.+|++|.++......++..
T Consensus 214 ~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~ 293 (666)
T PLN02614 214 QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQH 293 (666)
T ss_pred CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHh
Confidence 22223346899999999999999999999999999887665433221111146788999999999999998766667889
Q ss_pred CceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 242 GASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 242 G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
|+++++.+.++..+++.+++++||+++++|.+++.+...........+.+++..+..+...+...+..+.......++.+
T Consensus 294 G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 373 (666)
T PLN02614 294 GAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCD 373 (666)
T ss_pred CCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHH
Confidence 99999887799999999999999999999999999988766655555556666666665555555555544455677888
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
.+.+++.+..++++||.+++||+++++.+. .|.+.+ ++++++.||+||+++..+...+......+++|+|+|+++++|
T Consensus 374 ~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~-~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki 452 (666)
T PLN02614 374 KLVFNKVKQGLGGNVRIILSGAAPLASHVE-SFLRVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRL 452 (666)
T ss_pred HHHHHHHHHHhCCcEEEEEEcCCCCCHHHH-HHHHHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEE
Confidence 888888888888999999999999998765 455555 589999999999987655544433334589999999999999
Q ss_pred eecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCc
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVAL 480 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~ 480 (611)
+++++++..+++.|+.|||+|+||+++.|||++|+.|.+.|.+|||+|||+|++|+||+|++.||.||+|++++|++|+|
T Consensus 453 ~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p 532 (666)
T PLN02614 453 ESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAV 532 (666)
T ss_pred eeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecH
Confidence 98555555667788999999999999999999999999999999999999999999999999999999999768999999
Q ss_pred HHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCc
Q 007257 481 EYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGF 560 (611)
Q Consensus 481 ~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 560 (611)
.+||++|.+||+|.+|+|+|.+++..++|+|+++.+....|...++...+..+.+.++++.+.+.+.+.+...++.|++|
T Consensus 533 ~eIE~~l~~~p~V~~~~V~g~~~~~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 612 (666)
T PLN02614 533 ENIENIYGEVQAVDSVWVYGNSFESFLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGF 612 (666)
T ss_pred HHHHHHHhcCCCeeEEEEEecCCcceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999999999999999999886779999999999999999888877667888899999999999999988777889999
Q ss_pred ceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhhc
Q 007257 561 EHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKLA 607 (611)
Q Consensus 561 ~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~~ 607 (611)
.++++|.+++++|+++....|+++|++|..+.+.|+++|++||++..
T Consensus 613 e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ly~~~~ 659 (666)
T PLN02614 613 EIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDEMYKTTN 659 (666)
T ss_pred ceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999998644
No 3
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1e-81 Score=694.66 Aligned_cols=605 Identities=51% Similarity=0.901 Sum_probs=497.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++||++|+.+....++..+.++++||+||.++++++|++|.+.|+++||+|+|+++|+++|++++|||+++|++++|
T Consensus 52 ~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vp 131 (660)
T PLN02861 52 AVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVP 131 (660)
T ss_pred HHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEE
Confidence 57889999999764211334466789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++|++++++++|+++.....+..........++.++.+++.................+|+++......
T Consensus 132 l~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 210 (660)
T PLN02861 132 LYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSL- 210 (660)
T ss_pred ecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcc-
Confidence 9999999999999999999999998776554433222111245667776543221111111112334577777654321
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
.....+..++++++|+|||||||.||||++||.++...+......+......+..+|++++.+|++|+++....+.+++.
T Consensus 211 ~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~ 290 (660)
T PLN02861 211 DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISK 290 (660)
T ss_pred cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHh
Confidence 11223456899999999999999999999999999987765544331101124678999999999999998776678999
Q ss_pred CceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 242 GASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 242 G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
|+++++...++..+++.|++++||+++++|.+++.+.+...........+++.+++.+...+...+..+.......+..+
T Consensus 291 G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 370 (660)
T PLN02861 291 GASIGFWQGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLD 370 (660)
T ss_pred CCEEEEeCCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHH
Confidence 99999887799999999999999999999999999988777777777777888888777766666655544455567788
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC-CceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
.+.++++++.+++++|.+++||+++++++.+ |.+.++ .+++++||+||+++.++..........+++|+|++++++++
T Consensus 371 ~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i 449 (660)
T PLN02861 371 RLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARL 449 (660)
T ss_pred HHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEE
Confidence 8889999999989999999999999999865 445555 47999999999987665544333334589999999999999
Q ss_pred eecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCc
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVAL 480 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~ 480 (611)
++.++.+....+.++.|||+|+||+++.||+++++.|.+.|.+|||+|||+|++|+||+|++.||.||+|++++|++|+|
T Consensus 450 ~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p 529 (660)
T PLN02861 450 ESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAV 529 (660)
T ss_pred EEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcH
Confidence 98544443333455679999999999999999999999999999999999999999999999999999999768999999
Q ss_pred HHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCc
Q 007257 481 EYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGF 560 (611)
Q Consensus 481 ~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~ 560 (611)
.+||++|.+||.|.+|+|+|.++.+.++|+|+++.+....|...++...++.+++.+.+....+.+++.+.+.+..|+.+
T Consensus 530 ~eIE~~l~~~p~V~~a~V~G~~~~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 609 (660)
T PLN02861 530 ENLENTYSRCPLIASIWVYGNSFESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGF 609 (660)
T ss_pred HHHHHHHhcCCCeeEEEEEecCCcceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999999999999999999886679999999998887888777655556788888888999999999999887789999
Q ss_pred ceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhhcC
Q 007257 561 EHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKLAP 608 (611)
Q Consensus 561 ~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~~~ 608 (611)
.+++.+.+.+++|+++..++|+++|++|+++++.|+++|+++|++...
T Consensus 610 e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~lY~~~~~ 657 (660)
T PLN02861 610 EMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQLYSEAKG 657 (660)
T ss_pred ceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999997543
No 4
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.3e-81 Score=689.13 Aligned_cols=608 Identities=79% Similarity=1.306 Sum_probs=513.9
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+.+....++..+.++++||+|+.+++.++|.+|.+.|+++||+|+|+++|+++|++++|||+++|++++|
T Consensus 51 ~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vp 130 (660)
T PLN02430 51 SVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVP 130 (660)
T ss_pred HHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEE
Confidence 46789999999765211233456778999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++++++.++|+.++++++|+++..............+.++.++.+++.................+|+++...+...
T Consensus 131 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (660)
T PLN02430 131 LYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKEN 210 (660)
T ss_pred eccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccC
Confidence 99999999999999999999999987654433322222234566777776533211111111223456788877655332
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
.....+..++++++++|||||||.||||++||+++...+.............+..+|++++.+|++|.++....+.++..
T Consensus 211 ~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~ 290 (660)
T PLN02430 211 PSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRK 290 (660)
T ss_pred CCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHc
Confidence 22233456899999999999999999999999999887765433221111246788999999999999998877777899
Q ss_pred CceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 242 GASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 242 G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
|+++++...++..+++.+++++||++.++|.+++.+.+..........+.++.++..+...+...+..+.......++++
T Consensus 291 G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 370 (660)
T PLN02430 291 GASVGYYHGDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMAD 370 (660)
T ss_pred CCEEEEeCCChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Confidence 99998887788999999999999999999999999998888777777888889999998888888877766566678889
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEe
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLE 401 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~ 401 (611)
.+.+++.+..+++++|.+++||+++++++.++++...+++++++||+||+++..+...+......+++|.|.++++++++
T Consensus 371 ~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~ 450 (660)
T PLN02430 371 FLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLE 450 (660)
T ss_pred HHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEE
Confidence 99999999999999999999999999998777765545789999999999987776655444446899999999999999
Q ss_pred ecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcH
Q 007257 402 EVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALE 481 (611)
Q Consensus 402 ~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~ 481 (611)
++++.+..+.+.++.|||+|+||+++.||+++++.|.+.|.+|||+|||+|++|+||++++.||.+|+|++++|++|+|.
T Consensus 451 d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~ 530 (660)
T PLN02430 451 EVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALE 530 (660)
T ss_pred EcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchH
Confidence 86666656666667899999999999999999999999999999999999999999999999999999998789999999
Q ss_pred HHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcc
Q 007257 482 YLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFE 561 (611)
Q Consensus 482 ~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 561 (611)
+||++|.+||.|.+|+|+|....+.++|+|+++.+....|....+...+..++++++++.+.+.+.+.+.+.+..|+.|.
T Consensus 531 ~IE~~l~~~p~V~~~~V~G~~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e 610 (660)
T PLN02430 531 YLENVYGQNPIVEDIWVYGDSFKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFE 610 (660)
T ss_pred HHHHHHhcCCCeeEEEEEecCCcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCce
Confidence 99999999999999999997656799999999999888888877766678888999999999999999998777899999
Q ss_pred eeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhhcCC
Q 007257 562 HIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKLAPG 609 (611)
Q Consensus 562 ~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~~~~ 609 (611)
++++|++++++|++++...|+++|++|+.+.+.|+++|++||++..+.
T Consensus 611 ~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~~~~~~ 658 (660)
T PLN02430 611 YIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDEMYRKLAEK 658 (660)
T ss_pred eeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999999999999999999999999999987653
No 5
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.2e-81 Score=693.32 Aligned_cols=595 Identities=41% Similarity=0.696 Sum_probs=499.9
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+.+....++..+.++.+||+||.++++++|++|.+.|+++||+|+++++|+++|+++++||+++|++++|
T Consensus 53 ~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vp 132 (651)
T PLN02736 53 AVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVP 132 (651)
T ss_pred HHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEE
Confidence 57889999999643100344456789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++|+.++++++|++.+....+..... ..+.++.++..+..................+|+++.......
T Consensus 133 l~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (651)
T PLN02736 133 LYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS-EIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSS 211 (651)
T ss_pred eecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh-cCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccC
Confidence 9999999999999999999999999876655433222 335566666665332211111111233456788877654332
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
.....+..++++++|+|||||||.||||++||+++...+......+ ++..+|++++.+|++|.+++...+.++..
T Consensus 212 ~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~-----~~~~~d~~l~~lPl~h~~~~~~~~~~l~~ 286 (651)
T PLN02736 212 PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST-----KFYPSDVHISYLPLAHIYERVNQIVMLHY 286 (651)
T ss_pred CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc-----CCCCCCEEEEeCCHHHHHHHHHHHHHHHc
Confidence 2233445789999999999999999999999999998887766555 67889999999999999999888888999
Q ss_pred CceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 242 GASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 242 G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
|+++++.+.++..+++.+++++||+++++|.+++.+.+.........+.+++..+..+...+...+..+ ..+.+.++
T Consensus 287 G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 363 (651)
T PLN02736 287 GVAVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENG---KNPSPMWD 363 (651)
T ss_pred CCEEEEeCCCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcC---CCCCchHH
Confidence 999999888899999999999999999999999999988777777777788888877766655555443 23345667
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEe
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLE 401 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~ 401 (611)
.+.+++.+..+++++|.+++||+++++++.+++.+.+|+++++.||+||+++..+...... ...+++|.|+|+++++++
T Consensus 364 ~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~pg~~v~i~ 442 (651)
T PLN02736 364 RLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEGD-NLSGHVGSPNPACEVKLV 442 (651)
T ss_pred HHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCCC-CCCCccCCccCceEEEEE
Confidence 7788888888888999999999999999999999888999999999999987766554433 345899999999999999
Q ss_pred ecCCCCC-CCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCceecC
Q 007257 402 EVPEMGY-SPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVA 479 (611)
Q Consensus 402 ~~~~~~~-~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~ 479 (611)
+.+++.. ....+++.|||+|+||+++.||+++++.+++.| .+|||+|||+|++|+||++++.||.||+|++++|++|+
T Consensus 443 d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~ 522 (651)
T PLN02736 443 DVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIA 522 (651)
T ss_pred EccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEec
Confidence 8433211 111223469999999999999999999999999 68999999999999999999999999999976899999
Q ss_pred cHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCC-CCcHHHHhccHHHHHHHHHHHHHHHHhCCCC
Q 007257 480 LEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGH-AGSFLELCSLVQLQNYILSELKNAAERNKLR 558 (611)
Q Consensus 480 ~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 558 (611)
|.+||++|.+||+|.+|+|+|....+.++|+|+++.+....|.+..+. ..++.+++.++++.+.+.+.|...+++.+|+
T Consensus 523 p~eIE~~l~~~p~V~~a~V~g~~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 602 (651)
T PLN02736 523 PEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLR 602 (651)
T ss_pred hHHHHHHHhcCCCeeEEEEEecCCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999765679999999999888888777666 5789999999999999999999998878899
Q ss_pred CcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhh
Q 007257 559 GFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKL 606 (611)
Q Consensus 559 ~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~ 606 (611)
.|++|++|++++++|++++.++|++||++|+++++.|+++|++||...
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~~y~~~ 650 (651)
T PLN02736 603 GFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISDMYAEL 650 (651)
T ss_pred cceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999764
No 6
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=7.9e-78 Score=666.28 Aligned_cols=597 Identities=36% Similarity=0.604 Sum_probs=492.1
Q ss_pred ccccCCCCCceeeeccc--------cC------CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH
Q 007257 2 SVQKYPGNRMLGWRPFV--------DG------KFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVE 67 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~--------~~------~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~ 67 (611)
+|+++||++|+...... ++ ..++|+++||+|+.++++++|++|.+.|+++||+|+|+++|+++|++
T Consensus 67 ~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~ 146 (696)
T PLN02387 67 SCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLI 146 (696)
T ss_pred HHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH
Confidence 57889999999543110 11 12567889999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHh-hhCCC
Q 007257 68 AMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMA-VQTGI 146 (611)
Q Consensus 68 ~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~ 146 (611)
+++||+++|++++|+++.++.+++.++|+.++++++|++.+....+.... ...+.++.++.+++......... .....
T Consensus 147 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~-~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 225 (696)
T PLN02387 147 ALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDIS-SQLETVKRVIYMDDEGVDSDSSLSGSSNW 225 (696)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHh-hccCCceEEEEECCCCchhhhhhhccCCc
Confidence 99999999999999999999999999999999999999987766554332 23356777888775432111100 11223
Q ss_pred ceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecch
Q 007257 147 KPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPL 226 (611)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 226 (611)
...+|+++...+...........++|+++|+|||||||.||||++||+++...+......+ ..+..+|++++.+|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~----~~~~~~d~~l~~lPl 301 (696)
T PLN02387 226 TVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVV----PKLGKNDVYLAYLPL 301 (696)
T ss_pred EEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhc----CCCCCCCEEEEECcH
Confidence 4557777766543322233345789999999999999999999999999998877654432 146788999999999
Q ss_pred hhHHHHHHHHHHhhcCceEEEecC----C-----hHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHH
Q 007257 227 AHILDRVIEEYFFRRGASVGYYHG----D-----LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 297 (611)
Q Consensus 227 ~~~~g~~~~~~~l~~G~~~~~~~~----~-----~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (611)
+|++++......+..|+++.+... + +..++..+++++||+++++|.+++.+.+.........+.+.+..+.
T Consensus 302 ~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~ 381 (696)
T PLN02387 302 AHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFD 381 (696)
T ss_pred HHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 999998877667777877765432 1 2345668999999999999999999998776666666667777777
Q ss_pred HHHHHHHHHHhhc--CCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCce
Q 007257 298 ALYKYKLAWMNMG--YKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPT 375 (611)
Q Consensus 298 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~ 375 (611)
.+...+...+... ......+.+++.+.+++.+..+++++|.+++||+++++++.+++...+|++++++||+||+++.+
T Consensus 382 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~ 461 (696)
T PLN02387 382 IAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGA 461 (696)
T ss_pred HHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEeechhhcccce
Confidence 7766555444311 11234677889999999999999999999999999999999888887899999999999998877
Q ss_pred eeccCCCccccCccCCCccCeeEEEeecCCCCCCCC-CCCCCcEEEEecCCcccccCCChHhhhhhcc---CC--ccccC
Q 007257 376 TVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPL-DDPPCGEVCVRGKTLFSGYYKNPDLTRESII---DG--WFHTG 449 (611)
Q Consensus 376 ~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~-~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~g--~~~TG 449 (611)
+....... ..+++|.|+|+++++++|.++++.... .+++.|||+|+||+++.||+++++.|.+.|. +| ||+||
T Consensus 462 ~~~~~~~~-~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TG 540 (696)
T PLN02387 462 TFSEWDDT-SVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTG 540 (696)
T ss_pred eecCcccC-CCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecC
Confidence 66554433 348999999999999998544443221 2334699999999999999999999999982 35 99999
Q ss_pred ceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCC-C
Q 007257 450 DIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGH-A 528 (611)
Q Consensus 450 D~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~-~ 528 (611)
|+|++|+||++++.||.+|+|++++|++|+|.+||++|.+||.|.+|+|+|.+....++|+|+++.+....|....+. .
T Consensus 541 Dig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~ 620 (696)
T PLN02387 541 DIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFHSYCVALVVPSQQALEKWAKKAGIDY 620 (696)
T ss_pred ceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCcceEEEEEEeCHHHHHHHHHHcCCCC
Confidence 999999999999999999999986799999999999999999999999999887789999999999999999888776 5
Q ss_pred CcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHh
Q 007257 529 GSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYE 604 (611)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~ 604 (611)
.++.+.|.+.++.+.+.+.+.+..++.+|+.+++|+.|.+++++|++++...|++.|++|+.+.+.|+++|++||+
T Consensus 621 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 696 (696)
T PLN02387 621 SNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKREQIRKKFKDDLKKLYE 696 (696)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhhHHHHHHHHHHHHHHhC
Confidence 6799999999999999999999988789999999999999999999999999999999999999999999999995
No 7
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-77 Score=655.63 Aligned_cols=586 Identities=26% Similarity=0.415 Sum_probs=473.8
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcCCchhHHH
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS---GAEPG-----------CRVGIYGANCPQWVE 67 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~---Gv~~g-----------d~V~i~~~n~~~~~~ 67 (611)
+|+++||++|+++. + .+..++++||+|+.+++.++|++|.+. |+++| |+|+|+++|+++|++
T Consensus 70 ~~~~~p~~~Al~~~---~-~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~ 145 (746)
T PTZ00342 70 KYKLNNNKIAIVEH---S-CGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLV 145 (746)
T ss_pred HHhhcCCceeEecc---C-CCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHH
Confidence 57889999999864 2 223478999999999999999999974 99999 999999999999999
Q ss_pred HHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHH----------
Q 007257 68 AMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQ---------- 137 (611)
Q Consensus 68 ~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 137 (611)
+.+||+++|++.+|+++.++.+++.++|++++++++|++.+....+.... ...+.++.+++++......
T Consensus 146 ~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~-~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 224 (746)
T PTZ00342 146 ADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK-NELPHLKKLIILDTLIKSKEININKEEKN 224 (746)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh-ccCCCceEEEEECCCCccccccccccccc
Confidence 99999999999999999999999999999999999999877666554332 2345677777776421100
Q ss_pred -------HH-------------------------------------H---hhhCCCceeeHHHHHhcccccCCcCCCCCC
Q 007257 138 -------KE-------------------------------------M---AVQTGIKPYSWDEFLHLGKVNEMEILPPQP 170 (611)
Q Consensus 138 -------~~-------------------------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (611)
.. . ....+.....|+++.... .......+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 303 (746)
T PTZ00342 225 NGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNK-TTNYKIQNEDP 303 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhc-ccCCCCCCCCc
Confidence 00 0 000011223344443321 11122334568
Q ss_pred CCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC
Q 007257 171 FNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG 250 (611)
Q Consensus 171 ~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 250 (611)
+++++|+|||||||.||||++||+++.+.+....... .......+++++.+|++|++++...+.+++.|+++++.+.
T Consensus 304 dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~---~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~ 380 (746)
T PTZ00342 304 DFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS---IFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSK 380 (746)
T ss_pred cceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc---cccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 9999999999999999999999999998876543221 0012345899999999999999877788999999999877
Q ss_pred ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHH--hhHHH
Q 007257 251 DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLL--AFRKV 328 (611)
Q Consensus 251 ~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 328 (611)
++..+++.|++++||+++++|.+++++.+.+.......+.+++.++..+...+..... + ...++++.+ .+++.
T Consensus 381 ~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~----~~~~~~~~~~~v~~ki 455 (746)
T PTZ00342 381 DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNN-G----GFSKFLEGITHISSKI 455 (746)
T ss_pred CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhc-C----CcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999877776666777777777777665554322 1 123444443 47788
Q ss_pred HHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCc-cCeeEEEeecCCCC
Q 007257 329 KARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS-VYSELRLEEVPEMG 407 (611)
Q Consensus 329 ~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~-~~~~v~i~~~~~~~ 407 (611)
++.++++||.+++||+++++++.++|...+|++++++||+||+++..+...+.. ...+++|.|+ |++++++++.++..
T Consensus 456 r~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~-~~~gsvG~p~~pg~e~ki~d~~~~~ 534 (746)
T PTZ00342 456 KDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHADD-NNTESIGGPISPNTKYKVRTWETYK 534 (746)
T ss_pred HHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCCC-CCcccccCcCCCcEEEEEecccccc
Confidence 888999999999999999999999999888999999999999988766655443 3458999998 99999999843322
Q ss_pred CCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHH
Q 007257 408 YSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENV 486 (611)
Q Consensus 408 ~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~ 486 (611)
..+.++.|||+++||+++.|||++|+.|+++| .||||+|||+|++|+||+|++.||.+|+|++++|++|+|.+||++
T Consensus 535 --~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~ 612 (746)
T PTZ00342 535 --ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNL 612 (746)
T ss_pred --cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHH
Confidence 22233479999999999999999999999999 599999999999999999999999999999878999999999999
Q ss_pred HhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCC------C-CCcHHH-----HhccHHHHHHHHHHHHHHHHh
Q 007257 487 YCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNG------H-AGSFLE-----LCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 487 l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~------~-~~~~~~-----~~~~~~~~~~~~~~l~~~~~~ 554 (611)
|.+||.|.+|+|+|......++|+|+++.+....|...++ . ..+..+ .+.+.++.+.+.+.+.+..++
T Consensus 613 l~~~p~V~~~~VvG~~~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 692 (746)
T PTZ00342 613 YSQISFINFCVVYGDDSMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKK 692 (746)
T ss_pred HhcCCCccEEEEEccCCccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHH
Confidence 9999999999999986567999999999999988887653 2 223433 345667899999999999777
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH---HHHHHHHhh
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ---VEIDQLYEK 605 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~---~~~~~~y~~ 605 (611)
..|++|.+++.|.+++++|+++. -.||+.|++|..+.+.|+ +.|+++|.+
T Consensus 693 ~~l~~~e~i~~~~l~~~~~t~~~-~lTpt~KlkR~~v~~~y~~~i~~i~~~y~~ 745 (746)
T PTZ00342 693 TNLNRYNIINDIYLTSKVWDTNN-YLTPTFKVKRFYVFKDYAFFIDQVKKIYKN 745 (746)
T ss_pred hCCccceeeeeEEEecCCCCCCC-ccChhhhhhHHHHHHHHHHHHHHHHHHhcC
Confidence 78999999999999999999865 699999999999999999 777788864
No 8
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=8e-77 Score=620.89 Aligned_cols=578 Identities=36% Similarity=0.584 Sum_probs=482.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.++.+|+.+++... ..+.++.+||+|+.+++..+|.+|.+.|+..||+|+|++.|+++|+++.+||+.+|++.+|
T Consensus 25 ~~~~~~~~~a~~~~-----~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp 99 (613)
T COG1022 25 RVKDRPDGVALMYK-----ELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVP 99 (613)
T ss_pred HhhcCCcceeEeee-----cCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEe
Confidence 46678887788776 3678899999999999999999999999977999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH---hcc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL---HLG 158 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 158 (611)
+.+..+++++.++|++++++++|++...............+.........+........ .............. ...
T Consensus 100 ~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 178 (613)
T COG1022 100 IYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEA-KALVLEVFPDEGISLFLIDS 178 (613)
T ss_pred cCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccch-hhccccccccccchhhhhcc
Confidence 99999999999999999999999998766554433332222111111111100000000 00000000000000 111
Q ss_pred cccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHH
Q 007257 159 KVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYF 238 (611)
Q Consensus 159 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 238 (611)
........+..+||+|.|+|||||||.||||++||+|+++++..+...+. ...++|++++.+|+.|++...+....
T Consensus 179 ~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~----~~~~~d~~LsfLPlaHi~Er~~~~~~ 254 (613)
T COG1022 179 AGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP----PIGPGDRVLSFLPLAHIFERAFEGGL 254 (613)
T ss_pred cccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC----CCCCCcEEEEeCcHHHHHHHHHHHHH
Confidence 11222235678999999999999999999999999999999999888771 38899999999999999999875444
Q ss_pred hhcCceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh---hcCCCCC
Q 007257 239 FRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN---MGYKQRE 315 (611)
Q Consensus 239 l~~G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 315 (611)
...++...+...++..++..+++++||+++++|.+++.+-+.+.+...+.+..++.+|..+...+..... .+.....
T Consensus 255 ~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~ 334 (613)
T COG1022 255 ALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLS 334 (613)
T ss_pred HhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcc
Confidence 4444444455559999999999999999999999999999999999999888888888888776543332 2222222
Q ss_pred cchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccC
Q 007257 316 ASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVY 395 (611)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~ 395 (611)
.....|++.|+++++..+.+++.+++||+++++++..+|+.. |+++.++||+||+++..+.+.+..... +++|.|+|+
T Consensus 335 ~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGlTEts~~~~v~~~~~~~~-gtvG~p~p~ 412 (613)
T COG1022 335 WLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGLTETSAVVSVNPPDRFVL-GTVGKPLPG 412 (613)
T ss_pred hhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecccccccceEEccccCccc-CCcCCcCCC
Confidence 333589999999999999999999999999999999999975 899999999999999999998887666 999999999
Q ss_pred eeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCC
Q 007257 396 SELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQ 474 (611)
Q Consensus 396 ~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~ 474 (611)
++++|+| .|||+||||+++.|||++|+.|+++| .||||+|||+|.+|++|+|++.||.+|+|+.++
T Consensus 413 ~evKI~d-------------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~ 479 (613)
T COG1022 413 IEVKIAD-------------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKELIKLSN 479 (613)
T ss_pred ceEEEcc-------------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccceEECCC
Confidence 9999999 59999999999999999999999999 599999999999999999999999999999999
Q ss_pred ceecCcHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCC--CCcHHHHhccHHHHHHHHHHHHHHH
Q 007257 475 GEYVALEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGH--AGSFLELCSLVQLQNYILSELKNAA 552 (611)
Q Consensus 475 G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (611)
|++|.|+.||+.+.++|.|.+++|+| ++...+.|+|+++.+....|....+. ..+..+++.+..+.+.+..++....
T Consensus 480 GknIaP~~IE~~l~~~~~I~qi~vvg-~~k~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~ 558 (613)
T COG1022 480 GKNIAPEPIESKLAKSPLIEQICVVG-DDKKFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGN 558 (613)
T ss_pred CcccChHHHHHHHhcCCCeeEEEEEe-cCCcceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999 66889999999999999988888764 5788899999999999999999987
Q ss_pred HhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhhc
Q 007257 553 ERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKLA 607 (611)
Q Consensus 553 ~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~~ 607 (611)
. .+..+..++++.+++.+|+.+..-.|++-|++|..+.+.|+++++.+|++.+
T Consensus 559 ~--~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i~~~y~~~~ 611 (613)
T COG1022 559 K--RLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEIEAVYSRQS 611 (613)
T ss_pred h--cccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHHHHHhhccc
Confidence 5 5588999999999999999999999999999999999999999999999754
No 9
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-76 Score=580.90 Aligned_cols=575 Identities=38% Similarity=0.669 Sum_probs=518.7
Q ss_pred CCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCE-EEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCc
Q 007257 22 FGPYVWKTYKEVYEEVLQIVSALRASGAEPGCR-VGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEI 100 (611)
Q Consensus 22 ~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~-V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~ 100 (611)
=++|+++||.|+..++..+|++|.+.|++++++ ++|+++.+.+|+.+++||++.+..+|-+...+..+.+.|-|+++++
T Consensus 84 Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~ 163 (678)
T KOG1180|consen 84 LGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETES 163 (678)
T ss_pred ccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccc
Confidence 356899999999999999999999999997766 9999999999999999999999999999999999999999999999
Q ss_pred cEEEEcchhHHHHhccccccccCccEEEEecCCcH----HHHHHhhhCCCceeeHHHHHhcccccCCcCCCCCCCCeEEE
Q 007257 101 DFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA----EQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTI 176 (611)
Q Consensus 101 ~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 176 (611)
+.+|++.+.+..+.. .......++.||.++..+. ..-...........+++++.+.+.....++.++.|+|+|+|
T Consensus 164 ~~i~T~~~LL~kl~~-~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~I 242 (678)
T KOG1180|consen 164 TAIFTDSELLPKLKA-PLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACI 242 (678)
T ss_pred eEEEeCHHHHHHHHH-HHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEE
Confidence 999999998885543 3345588899999985332 22222234567889999999999877667777799999999
Q ss_pred EEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC-Ch---
Q 007257 177 MYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-DL--- 252 (611)
Q Consensus 177 ~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~--- 252 (611)
||||||||.||||+++|.|+++.+.......+ .+.+.|+++..+|+.|++.+.+-+.+++.|+.+-..+. +.
T Consensus 243 MYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~----~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdt 318 (678)
T KOG1180|consen 243 MYTSGSTGLPKGVMLTHSNIVAGVTGVGENVP----ELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDT 318 (678)
T ss_pred EEcCCCCCCCceEEEecccHHhhhhhhcccCc----ccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceeccc
Confidence 99999999999999999999999998876653 68899999999999999999999999999999987654 11
Q ss_pred -----HHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHH
Q 007257 253 -----NALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRK 327 (611)
Q Consensus 253 -----~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (611)
..---.+..+|||+|.++|.++.++-+........++.+.+..|..++..+...+.. ...-.++++.+.|.+
T Consensus 319 s~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~---~g~~s~~ld~lVFkK 395 (678)
T KOG1180|consen 319 SSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIER---NGPGSPLLDALVFKK 395 (678)
T ss_pred chhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhc---cCCchhhHHHHHHHH
Confidence 111223457899999999999999999999999999999999999998877777762 234578999999999
Q ss_pred HHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCCCC
Q 007257 328 VKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMG 407 (611)
Q Consensus 328 ~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~ 407 (611)
++...+.+||++++||++|+++..+++.-.+++|+.++||.||+++..+...+.+... +.+|.|++.++++++|.++++
T Consensus 396 Ir~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~-g~vG~pl~c~eiKLvdw~EgG 474 (678)
T KOG1180|consen 396 IRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFST-GRVGAPLPCCEIKLVDWEEGG 474 (678)
T ss_pred HHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhhccc-ccccCCccceEEEEEEhhhcC
Confidence 9999999999999999999999999999888999999999999999988887776655 899999999999999999999
Q ss_pred CCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-c-CC--ccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHH
Q 007257 408 YSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-I-DG--WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYL 483 (611)
Q Consensus 408 ~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~-~g--~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~i 483 (611)
...-.....||||++|+++..||+++++.|++.| . +| ||+|||+|.+.+||.|.+.+|.+|.+|+.+|+.|+++-+
T Consensus 475 Y~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~Kv 554 (678)
T KOG1180|consen 475 YFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKV 554 (678)
T ss_pred ccCCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHH
Confidence 8777666789999999999999999999999999 4 88 999999999999999999999999999999999999999
Q ss_pred HHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCC-CCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcce
Q 007257 484 ENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGH-AGSFLELCSLVQLQNYILSELKNAAERNKLRGFEH 562 (611)
Q Consensus 484 E~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 562 (611)
|.+++..|.|+...|++.+....++++|||+......+....+. ..++.++|.+.++.+.+.++|.++.+.++|.++.+
T Consensus 555 Ea~l~s~p~V~NICvyAd~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEi 634 (678)
T KOG1180|consen 555 EAALRSSPYVDNICVYADSNKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEI 634 (678)
T ss_pred HHHHhcCcchhheEEecccccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999999999999999998889999999999999999998888 55999999999999999999999998899999999
Q ss_pred eeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhh
Q 007257 563 IKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEK 605 (611)
Q Consensus 563 p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~ 605 (611)
|..|++.++++++++.-.|+.-|++|+.+++.|+++||++|++
T Consensus 635 p~~I~l~~e~WTPenGlvT~A~KLKRk~I~~~~k~ei~~~Y~~ 677 (678)
T KOG1180|consen 635 PAKIVLSPEPWTPENGLVTAALKLKRKEILAAYKKEIDRLYKE 677 (678)
T ss_pred cceeEecCCCcCCCccccHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999985
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9e-76 Score=651.60 Aligned_cols=591 Identities=31% Similarity=0.519 Sum_probs=481.3
Q ss_pred ccccCCCCCceeeeccc----------cCC--------CCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 007257 2 SVQKYPGNRMLGWRPFV----------DGK--------FGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP 63 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~----------~~~--------~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 63 (611)
+|+++||++|+.+.... ++. .++++++||+||.++++++|++|.+.|+++||+|+|+++|++
T Consensus 78 ~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 157 (700)
T PTZ00216 78 ICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW 157 (700)
T ss_pred HHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH
Confidence 57889999999985100 111 125689999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhh
Q 007257 64 QWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQ 143 (611)
Q Consensus 64 ~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 143 (611)
+|++++|||+++|++++|+++.++++++.++|++++++++|++......+.............++.++..... ...
T Consensus 158 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~~~~----~~~ 233 (700)
T PTZ00216 158 EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSLPAS----VDT 233 (700)
T ss_pred HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCCccc----ccc
Confidence 9999999999999999999999999999999999999999998776554433222111112245555432211 011
Q ss_pred CCCceeeHHHHHhccc--ccC-CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEE
Q 007257 144 TGIKPYSWDEFLHLGK--VNE-MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVY 220 (611)
Q Consensus 144 ~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 220 (611)
......+|+++...+. ... ....+..++++++++|||||||.||||++||+++.+.+......+......+..++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ 313 (700)
T PTZ00216 234 EGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETY 313 (700)
T ss_pred CCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEE
Confidence 2234567888776542 111 1123446899999999999999999999999999988776543321100123678999
Q ss_pred EEecchhhHHHHHHHHHHhhcCceEEEecCChHHHHH-------HHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHH
Q 007257 221 LSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRD-------DLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRR 293 (611)
Q Consensus 221 l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~ 293 (611)
++.+|++|.++.......+..|+++++. ++..+.+ .+++++||++.++|.+++.+.+.........+.+++
T Consensus 314 ls~lPl~H~~~~~~~~~~l~~G~~v~~~--~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~ 391 (700)
T PTZ00216 314 CSYLPLAHIMEFGVTNIFLARGALIGFG--SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKR 391 (700)
T ss_pred EEEChHHHHHHHHHHHHHHHcCCEEEEC--CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHH
Confidence 9999999999987666667788877663 4555554 688999999999999999999887777666777788
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCC
Q 007257 294 RIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCG 373 (611)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~ 373 (611)
..+..+...+...+..+ ...++++...+++.+..+++++|.+++||+++++++.++++..++ +++++||+||+++
T Consensus 392 ~~~~~a~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TEt~~ 466 (700)
T PTZ00216 392 RVFDHAYQSRLRALKEG----KDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTETVC 466 (700)
T ss_pred HHHHHHHHHHHHHHHcC----CCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-hHhhccCcccccc
Confidence 88887776666555543 235678888888888888899999999999999999998888778 9999999999987
Q ss_pred ceeeccCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceE
Q 007257 374 PTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIG 452 (611)
Q Consensus 374 ~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~ 452 (611)
..+....... ..+++|+|+++++++|+| +++......+++.|||+|+||+++.||+++++.|++.| .+|||+|||+|
T Consensus 467 ~~~~~~~~~~-~~~svG~p~~g~evkI~d-~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig 544 (700)
T PTZ00216 467 CGGIQRTGDL-EPNAVGQLLKGVEMKLLD-TEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVG 544 (700)
T ss_pred cccccCCCCC-CCCCcCCcCCCeEEEEee-chhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceE
Confidence 7665544332 348999999999999999 44332333445679999999999999999999999999 68999999999
Q ss_pred EEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcce--EEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCc
Q 007257 453 QILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIED--IWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGS 530 (611)
Q Consensus 453 ~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~--~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~ 530 (611)
++|+||++++.||.||+|+..+|++|+|.+||++|.+||.|.+ ++|++.++.+.++|+|+++.+....|....+....
T Consensus 545 ~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~~~ 624 (700)
T PTZ00216 545 SIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPARSYICALVLTDEAKAMAFAKEHGIEGE 624 (700)
T ss_pred EEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCCceEEEEEecCHHHHHHHHHHcCCCCC
Confidence 9999999999999999998559999999999999999999997 45666666789999999999988888877766667
Q ss_pred HHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhh
Q 007257 531 FLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEK 605 (611)
Q Consensus 531 ~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~ 605 (611)
+.+.+.+.++.+.+.+.+.+..++..|.+|.+|+.|++++++|+++....|+++|++|+++++.|++.|++||++
T Consensus 625 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~~ 699 (700)
T PTZ00216 625 YPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYADLIKELFAD 699 (700)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHHHHHHHhcC
Confidence 889999999999999999999887899999999999999999999999999999999999999999999999975
No 11
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5e-76 Score=610.65 Aligned_cols=493 Identities=28% Similarity=0.380 Sum_probs=404.9
Q ss_pred CCCC-CceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 6 YPGN-RMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASG--AEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 6 ~pd~-~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~G--v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
++++ +++++. +. . -+.+||.|+.+++.++|.+|.+.| +++||+|++++||+++++++++||+.+|+++.++
T Consensus 29 ~~~~~~~~i~~---~~-~--g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~ 102 (537)
T KOG1176|consen 29 YLDRNTSLVYQ---DS-D--GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL 102 (537)
T ss_pred cccCcceEEEe---cC-C--CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence 3444 666665 21 1 279999999999999999999875 8899999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceee-HHHHHhccccc
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS-WDEFLHLGKVN 161 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 161 (611)
||.+.+.++.+.++.++++++|++......+.+...... ..++++...... ........... +..+.......
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 176 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---LKIIVLTGDEGV---ISISDLVEDLDAFEDLMPEGLPD 176 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---CceEEEecccCc---cccccccccccchhhccccCCCc
Confidence 999999999999999999999999988877655443221 344444432100 00000111111 33333222111
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHH-hh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYF-FR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~-l~ 240 (611)
. ..+...+|++.++|||||||.||||.+||+++..+........ .+...++.++.+|++|.+|+...+.+ +.
T Consensus 177 ~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-----~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~ 249 (537)
T KOG1176|consen 177 G--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGW-----ELTSDDVYLCTLPLFHIYGLITLLLSLLA 249 (537)
T ss_pred c--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcc-----cCCCCceEEEechHHHHhHHHHHHHHHHh
Confidence 1 5566779999999999999999999999999998876654444 56779999999999999999998775 55
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.+++|++|++.++|.++..|++. +.
T Consensus 250 ~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~-------------------------------------p~ 292 (537)
T KOG1176|consen 250 GGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKS-------------------------------------PI 292 (537)
T ss_pred CCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcC-------------------------------------Cc
Confidence 5666666666 999999999999999999999999998762 22
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC-CceeeccccCCCCCceeeccCCCccccCccCCCccCeeE
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSEL 398 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v 398 (611)
..++++ ++++.+.+||++++++..+.+.+.++ ..+.++||+||+|+.++.+......+++++|.++++.++
T Consensus 293 ~~~~~l--------~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~ 364 (537)
T KOG1176|consen 293 VKKYDL--------SSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRV 364 (537)
T ss_pred cCcccC--------CccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEE
Confidence 222333 59999999999999999999999998 889999999999998888877665667999999998877
Q ss_pred EEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccC-CccccCceEEEccCCeEEEEeccCCeEEcCCcee
Q 007257 399 RLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEY 477 (611)
Q Consensus 399 ~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~ 477 (611)
++.+ +.+ ..+++++.||||++|++++.||++||+.|++.|.+ |||+|||+|++|+||+|++.+|.+|+||. +|++
T Consensus 365 ~v~~-e~g--~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~-~G~q 440 (537)
T KOG1176|consen 365 KVLD-ETG--VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKY-GGEQ 440 (537)
T ss_pred EeeC-CCC--CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheee-CCEE
Confidence 7776 433 56777889999999999999999999999999955 99999999999999999999999999997 9999
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (611)
|+|.|||++|.+||.|.||+|||.+|+ +.++|+||++++. .. . .++|.++++
T Consensus 441 v~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~--------~l--------t--------e~di~~~v~- 495 (537)
T KOG1176|consen 441 VSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGS--------TL--------T--------EKDIIEYVR- 495 (537)
T ss_pred eCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCC--------cC--------C--------HHHHHHHHH-
Confidence 999999999999999999999999987 4999999998743 11 1 234555554
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
++|+.|++|+.+.|+++. |+|++||++|+.|++++.+
T Consensus 496 k~l~~y~~~~~V~Fvd~l------PKs~~GKi~R~~lr~~~~~ 532 (537)
T KOG1176|consen 496 KKLPAYKLPGGVVFVDEL------PKTPNGKILRRKLRDIAKK 532 (537)
T ss_pred hhCChhhccCeEEEeccC------CCCCcchHHHHHHHHHHHh
Confidence 889999999999999876 9999999999999999876
No 12
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4.9e-74 Score=592.28 Aligned_cols=486 Identities=21% Similarity=0.225 Sum_probs=401.8
Q ss_pred CCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
.+|++|+++. +...+. +.+||+||++.++++|+.|++. |+ +||||++++|+.+|.++++|||+++|++.+|+.+
T Consensus 23 ~~~~~aii~~---~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~~~vf~ 97 (528)
T COG0365 23 RPDDTAIIFD---GEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIPAVVSP 97 (528)
T ss_pred CCCceEEEEE---cCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEEeeccc
Confidence 4789999998 433344 9999999999999999999874 78 9999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhHHHHhcccccc--ccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccC
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRS--AQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNE 162 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (611)
.++++++..++++++++++|+++............. ......+++..... ..|.++.... ...
T Consensus 98 ~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~--------------~~~~~~~~~~-~~~ 162 (528)
T COG0365 98 GLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG--------------LWYDEAVEKA-SEK 162 (528)
T ss_pred CCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc--------------ccHHHHhhcc-CCC
Confidence 999999999999999999999887655432211100 00000022222111 4566665544 233
Q ss_pred CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcc-cccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 163 MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVD-LFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 163 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
....+..++|+++++|||||||+||||+++|.+++....... ..+ .+.++|++++..++.|++|... .+.++.
T Consensus 163 ~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~-----~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~ 237 (528)
T COG0365 163 FEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHG-----DLLPGDRFWNSSDPGWIYGLWYSVFSPLA 237 (528)
T ss_pred CCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhh-----CCCCCCEEEeCCCchhhhCchHHHHHHHh
Confidence 444458999999999999999999999999997776665443 333 6679999999999999999998 677899
Q ss_pred cCceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 241 RGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 241 ~G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
.|++++++.. ++..+++.|+++++|.++++|+.++.|.+...
T Consensus 238 ~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~---------------------------------- 283 (528)
T COG0365 238 SGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGL---------------------------------- 283 (528)
T ss_pred cCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC----------------------------------
Confidence 9999999876 38899999999999999999999999865311
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCe
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYS 396 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~ 396 (611)
. +...+++||.+.++||||+++.++++.+.+|++|.+.||+||+|+++....+ .... ++.|.|+||+
T Consensus 284 ---~--------~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~-g~~g~p~pG~ 350 (528)
T COG0365 284 ---G--------EPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKN-GSSGLPLPGY 350 (528)
T ss_pred ---c--------ccccchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCC-CCCCCCCCCc
Confidence 1 1223359999999999999999999999999999999999999977666655 3333 5569999999
Q ss_pred eEEEeecCCCCCCCCCCCCCcEEEEecC--CcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCC
Q 007257 397 ELRLEEVPEMGYSPLDDPPCGEVCVRGK--TLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQ 474 (611)
Q Consensus 397 ~v~i~~~~~~~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~ 474 (611)
++.++| +++ .+++.++ |+|.++.+ +++.+||+|++.+.++|.++||.|||.+++|+||++++.||.||+||+ .
T Consensus 351 ~~~vvd-d~g--~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI~v-s 425 (528)
T COG0365 351 AVRRVD-DEG--NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVIKV-S 425 (528)
T ss_pred eeEEEC-CCC--CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceEec-c
Confidence 999999 553 5666667 99999986 889999999999999996669999999999999999999999999997 8
Q ss_pred ceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHH
Q 007257 475 GEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNA 551 (611)
Q Consensus 475 G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (611)
|+++.|.|||++|.+||.|.||+|||.+|+ +.+.|||+++++... . .+.++|+++
T Consensus 426 G~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~------------------~----~L~~ei~~~ 483 (528)
T COG0365 426 GKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEP------------------N----ELAEEIRRH 483 (528)
T ss_pred CeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCCh------------------H----HHHHHHHHH
Confidence 999999999999999999999999999876 379999999987521 1 556666677
Q ss_pred HHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 552 AERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 552 ~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+++...| +..|+.|.++++. |+|.+||+.|+.|++.+.+
T Consensus 484 vr~~~~~-~~~p~~i~fv~~L------PkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 484 VARNIGP-HAIPRKIRFVDEL------PKTASGKIQRRLLRKILHK 522 (528)
T ss_pred HHhccCc-ccCCceEEEecCC------CCCCcccHHHHHHHHHHhh
Confidence 7544444 9999999999776 9999999999999998874
No 13
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-73 Score=547.39 Aligned_cols=498 Identities=23% Similarity=0.292 Sum_probs=420.3
Q ss_pred cccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 3 VQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 3 a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
+++.||+.|+++.. -+ .++||+|+.+.++++|++|...|+++||+|++..||+.+|+.++|||+++|.+.+++
T Consensus 60 t~~v~dkea~Vf~~--eg-----~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~ 132 (596)
T KOG1177|consen 60 TERVPDKEAAVFDH--EG-----IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNL 132 (596)
T ss_pred hhccCcceEEEEee--cc-----chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEecc
Confidence 57789999999872 12 469999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHH------------HHhcc-----ccccccCccEEEEecCCcHHHHHHhhhCC
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVK------------ELLSP-----DCRSAQRLRVMVCFTSLTAEQKEMAVQTG 145 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~------------~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 145 (611)
||.+...++++.|++.+++++|+.+.... .+... -.+.++.++.++..+++.. .
T Consensus 133 NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~---------~ 203 (596)
T KOG1177|consen 133 NPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHP---------L 203 (596)
T ss_pred CcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCc---------C
Confidence 99999999999999999999999874321 11111 1224477778877774332 2
Q ss_pred CceeeHHHHHhcccccCC-----cCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEE
Q 007257 146 IKPYSWDEFLHLGKVNEM-----EILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVY 220 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 220 (611)
.+...+++++.....+.. -.....||+++.|.|||||||.|||+-+||-+++++.......+ ++.+.+++
T Consensus 204 ~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~-----g~~e~~~i 278 (596)
T KOG1177|consen 204 PGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA-----GYNEKHRI 278 (596)
T ss_pred CCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh-----CcCcceEE
Confidence 345667777766544221 12345789999999999999999999999999999998888777 88888899
Q ss_pred EEecchhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHH
Q 007257 221 LSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 297 (611)
Q Consensus 221 l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (611)
.+..|++|.+|... ++.++..|++++++.+ ++...+++|.++++|.++++|++|..|++..
T Consensus 279 ~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~---------------- 342 (596)
T KOG1177|consen 279 CIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIP---------------- 342 (596)
T ss_pred EecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcch----------------
Confidence 99999999999654 7788999999999766 9999999999999999999999999987532
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCC-ceeeccccCCCCCcee
Q 007257 298 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTT 376 (611)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~ 376 (611)
....+++ +++|.++.||+++|+++.+.+...++. .+...||+||++.+.+
T Consensus 343 ---------------------~~~~~~~--------s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~ 393 (596)
T KOG1177|consen 343 ---------------------QKQQVDL--------SSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLF 393 (596)
T ss_pred ---------------------hhccCch--------hhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCccee
Confidence 2222233 389999999999999999999887653 4778999999998888
Q ss_pred eccCCC--ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEE
Q 007257 377 VCFPDE--MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQ 453 (611)
Q Consensus 377 ~~~~~~--~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~ 453 (611)
....++ .....++|+.+++.+..+++ .++...++ +..|||++||++.+.|||++++.|.++. .|.||+|||+|.
T Consensus 394 ~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~--~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~ 470 (596)
T KOG1177|consen 394 MSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPL--GTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAV 470 (596)
T ss_pred eecCCCCHHHHHhhhhhccccccccccc-CCCCcccc--CCCceEEEEechhheeecCCcccchhhcccccceecCceEE
Confidence 776655 34447899999999999999 66655544 4579999999999999999999999988 789999999999
Q ss_pred EccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCCC---eEEEEEecChHHHHHHHHHCCCCCc
Q 007257 454 ILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLKS---MLVAVVVPCEEDTKKWAYSNGHAGS 530 (611)
Q Consensus 454 ~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~ 530 (611)
+|++|.+++.||++|||+ ++|++|+|.|||+.|.+||.|.++.|+|++|.+ .++|+|-+.++...
T Consensus 471 m~enG~i~iVGRskdmI~-rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~----------- 538 (596)
T KOG1177|consen 471 MDENGTIEIVGRSKDMII-RGGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEG----------- 538 (596)
T ss_pred EcCCCcEEEEEcccCeEE-eCCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccc-----------
Confidence 999999999999999998 699999999999999999999999999999774 88999988875410
Q ss_pred HHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 531 FLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 531 ~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
....+.|+.+++ .++..|++|++|.++++ +|+|-+|||+|.+++++.+.++
T Consensus 539 -----------~~t~E~lKa~Ck-~klaHFKiPky~vf~~~------FPlT~tGKIqKFeir~~~k~~l 589 (596)
T KOG1177|consen 539 -----------KTTAETLKAMCK-GKLAHFKIPKYFVFVDE------FPLTTTGKIQKFEIREMSKGHL 589 (596)
T ss_pred -----------cccHHHHHHHHh-cccccccCCcEEEEecc------CcccccccchhHHHHHHHHhhc
Confidence 134567778886 77999999999999976 3999999999999999998655
No 14
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-71 Score=595.59 Aligned_cols=495 Identities=29% Similarity=0.415 Sum_probs=404.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++|+++|+++. +.. + ++||+||+++++++|.+|.+.|+++||+|+|+++|++++++++|||+++|++++|
T Consensus 20 ~a~~~~~~~a~~~~---~~~-~---~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vp 92 (534)
T COG0318 20 AARRNPDRPALIFL---GRG-G---RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVP 92 (534)
T ss_pred HHHhCCCceEEEEc---CCC-c---eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEee
Confidence 57789999999997 321 1 5999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCce-eeHHHHHhcccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKP-YSWDEFLHLGKV 160 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 160 (611)
+||.++..++.++++.++++++++++........ .....+....+........ .. .+++.+......
T Consensus 93 ln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 160 (534)
T COG0318 93 LNPRLTPRELAYILNDAGAKVLITSAEFAALLEA-VAEALPVVLVVLLVGDADD-----------RLPITLEALAAEGPG 160 (534)
T ss_pred cCcccCHHHHHHHHHhcCCeEEEEcccchhHHHH-HhccCCcceEEEecccccc-----------cccccHHHHhhccCC
Confidence 9999999999999999999999999873222211 1111122222222221110 00 234444322222
Q ss_pred cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCC--CCCCcEEEEecchhhHHHHHHHHHH
Q 007257 161 NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDK--MTVDDVYLSFLPLAHILDRVIEEYF 238 (611)
Q Consensus 161 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~--~~~~~~~l~~~p~~~~~g~~~~~~~ 238 (611)
.........++++++++|||||||.||+|++||+++..+...+...+ . +...|++++++|++|.+|+...+.+
T Consensus 161 ~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~~~d~~l~~lPl~H~~Gl~~~~~~ 235 (534)
T COG0318 161 PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-----GGGLTPDDVVLSWLPLFHIFGLIVGLLA 235 (534)
T ss_pred cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-----cccCCCCceEEEecChHHHHHHHHHHHH
Confidence 22222236799999999999999999999999999999888877766 5 8899999999999999999986665
Q ss_pred -hhcCceEEEec---CChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCC
Q 007257 239 -FRRGASVGYYH---GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQR 314 (611)
Q Consensus 239 -l~~G~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (611)
++.|+++++.+ +++..++..+.++++|+++++|.++..++.......
T Consensus 236 ~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~----------------------------- 286 (534)
T COG0318 236 PLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDD----------------------------- 286 (534)
T ss_pred HHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCc-----------------------------
Confidence 89999999987 499999999999999999999999999876322211
Q ss_pred CcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC-CceeeccccCCCCCceeeccCCC-ccccCccCCC
Q 007257 315 EASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDE-MCMVGTAGPV 392 (611)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~yG~tE~g~~~~~~~~~~-~~~~~~~G~~ 392 (611)
.++. +++|.+++||+++++++.+.+.+.++ ..+.+.||+||+++.++.+.... ....+++|.|
T Consensus 287 --------~~~~-------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~ 351 (534)
T COG0318 287 --------DDLS-------SSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRP 351 (534)
T ss_pred --------cccc-------cceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCccccc
Confidence 0010 13999999999999999999999997 57999999999998888777666 2355788999
Q ss_pred ccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccC-CccccCceEEEccCCeEEEEeccCCeEE
Q 007257 393 SVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVVKIIDRKKNLIK 471 (611)
Q Consensus 393 ~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~dG~l~~~GR~~d~i~ 471 (611)
+|+++++|+| ++++ .+.+ |+.|||+++||+++.|||++|+.|.+.|.+ |||+|||+|++|+||++++.||.+|+|+
T Consensus 352 ~pg~~v~Ivd-~~~~-~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~ 428 (534)
T COG0318 352 LPGVEVRIVD-PDGG-EVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLII 428 (534)
T ss_pred CCCcEEEEEe-CCCC-ccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEE
Confidence 9999999999 5554 3444 779999999999999999999999998875 9999999999999999999999999999
Q ss_pred cCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHH
Q 007257 472 ISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSEL 548 (611)
Q Consensus 472 ~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (611)
. +|++|+|.+||+++.+||.|.+|+|+|.+++ +.++|+|+++++.. . ....++|
T Consensus 429 ~-gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~------------------~----~~~~~~i 485 (534)
T COG0318 429 S-GGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGD------------------A----ELTAEEL 485 (534)
T ss_pred e-CCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCC------------------C----CCCHHHH
Confidence 6 9999999999999999999999999999876 59999999987530 0 0012344
Q ss_pred HHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 549 KNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 549 ~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.++++ ..++.|++|+.+.++++. |+|++||++|++|++.+..
T Consensus 486 ~~~~~-~~l~~~~~P~~v~~v~~l------P~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 486 RAFLR-KRLALYKVPRIVVFVDEL------PRTASGKIDRRALREEYRA 527 (534)
T ss_pred HHHHH-hhhhcccCCeEEEEeCCC------CCCCchhhhHHHHHHHHHh
Confidence 44443 579999999999999665 9999999999999999877
No 15
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.8e-68 Score=585.39 Aligned_cols=530 Identities=20% Similarity=0.268 Sum_probs=416.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + ..+.++++||+||.++++++|++|.+.|+++||+|+++++|+++|++++|||+++|++++|
T Consensus 48 ~a~~~p~~~a~~~~---~-~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vp 123 (614)
T PRK08180 48 WAQEAPDRVFLAER---G-ADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAP 123 (614)
T ss_pred HHHHCCCCceeeec---c-CCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEee
Confidence 56789999999875 2 3345689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-----hhHHHHHHhhcCccEEEEcchh-HHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH
Q 007257 82 LYDTLG-----PGAVNFILDHAEIDFVFVQDKK-VKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL 155 (611)
Q Consensus 82 l~~~~~-----~~~l~~~l~~~~~~~li~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (611)
++|.++ .+++.+++++++++++|+++.. .......... .. ..++....... .....+|.++.
T Consensus 124 l~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~-~~~i~~~~~~~---------~~~~~~~~~~~ 191 (614)
T PRK08180 124 VSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--AD-VEVVAVRGAVP---------GRAATPFAALL 191 (614)
T ss_pred eccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CC-ceEEEecCCCC---------CcccccHHHHh
Confidence 999998 7899999999999999998642 2211111111 11 12222222110 00123455554
Q ss_pred hcccccC--CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCC--CCcEEEEecchhhHHH
Q 007257 156 HLGKVNE--MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT--VDDVYLSFLPLAHILD 231 (611)
Q Consensus 156 ~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~g 231 (611)
....... .......++++++|+|||||||.||||++||+++...+......+ ... ..+++++.+|++|.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~~l~~lPl~h~~g 266 (614)
T PRK08180 192 ATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF-----PFLAEEPPVLVDWLPWNHTFG 266 (614)
T ss_pred ccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc-----cccCCCCcEEEEecchHHHhh
Confidence 3321111 111234678999999999999999999999999998877655444 332 5689999999999999
Q ss_pred HHH-HHHHhhcCceEEEecC--C---hHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 007257 232 RVI-EEYFFRRGASVGYYHG--D---LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 305 (611)
Q Consensus 232 ~~~-~~~~l~~G~~~~~~~~--~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
+.. .+.++..|+++++.+. + ...+++.++++++|+++++|.++..|.+.+....
T Consensus 267 ~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~-------------------- 326 (614)
T PRK08180 267 GNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDA-------------------- 326 (614)
T ss_pred HHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhch--------------------
Confidence 865 5567899999998753 3 3567889999999999999999999876432210
Q ss_pred HHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHH----cC--CceeeccccCCCCCceeecc
Q 007257 306 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVT----CC--AFLVQGYGLTETCGPTTVCF 379 (611)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~----~~--~~v~~~yG~tE~g~~~~~~~ 379 (611)
......+++||.+++||+++++++.+.+.+. +| +++++.||+||++++++...
T Consensus 327 ---------------------~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~ 385 (614)
T PRK08180 327 ---------------------ALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTT 385 (614)
T ss_pred ---------------------hhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecc
Confidence 0111223599999999999999999998874 33 68999999999987766544
Q ss_pred CCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEE----
Q 007257 380 PDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQI---- 454 (611)
Q Consensus 380 ~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~---- 454 (611)
... ..++++|+|++++++++++ + +..|||+|+|++++.||+++++.+.+.| .+|||+|||+|++
T Consensus 386 ~~~-~~~~svG~p~pg~~v~i~d-~---------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~ 454 (614)
T PRK08180 386 GPL-SRAGNIGLPAPGCEVKLVP-V---------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPA 454 (614)
T ss_pred ccc-CCCCcccCccCCcEEEEec-C---------CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCc
Confidence 332 3458999999999999987 2 2359999999999999999999999999 6899999999999
Q ss_pred ccCCeEEEEeccCCeEEcCCceecC--cHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHH
Q 007257 455 LPNGVVKIIDRKKNLIKISQGEYVA--LEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFL 532 (611)
Q Consensus 455 ~~dG~l~~~GR~~d~i~~~~G~~v~--~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~ 532 (611)
|+||++++.||.+|+|++++|++++ +.|+|.++.+||+|.+|+|+|.+ .+.+.|+|+++++....+.... ...+..
T Consensus 455 d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~-~~~~~a~V~~~~~~~~~~~~~~-~~~~~~ 532 (614)
T PRK08180 455 DPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHD-RDEIGLLVFPNLDACRRLAGLL-ADASLA 532 (614)
T ss_pred CCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCC-CCceEEEEEcCHHHHHHHHhhc-ccCCHH
Confidence 4689999999999999877898776 77888999999999999999988 4578899999987544443332 122334
Q ss_pred HHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhhc
Q 007257 533 ELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKLA 607 (611)
Q Consensus 533 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~~ 607 (611)
+.++.+++.+.+.+.|.++.. ...+.+.+|+++.++++++...+...|++||++|+++.+.|+++|+++|++..
T Consensus 533 ~~~~~~~l~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY~~~~ 606 (614)
T PRK08180 533 EVLAHPAVRAAFRERLARLNA-QATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALYADEP 606 (614)
T ss_pred HHhcCHHHHHHHHHHHHHHHh-hccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHhCCCC
Confidence 455778889999999988875 33445669999999999888888999999999999999999999999999653
No 16
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-69 Score=595.95 Aligned_cols=515 Identities=17% Similarity=0.198 Sum_probs=394.6
Q ss_pred CCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT 85 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~ 85 (611)
+||++|+++. ....+..+++||+||.+++.++|..|++.|+++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 74 ~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 74 KRDQDALIYE---CPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCC
Confidence 7999999986 3233345899999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhhcCccEEEEcchh---------HHHHhccccccccCccEEEEecCCc---HHHHHH--hhhCCCceeeH
Q 007257 86 LGPGAVNFILDHAEIDFVFVQDKK---------VKELLSPDCRSAQRLRVMVCFTSLT---AEQKEM--AVQTGIKPYSW 151 (611)
Q Consensus 86 ~~~~~l~~~l~~~~~~~li~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~--~~~~~~~~~~~ 151 (611)
++.+++.++|++++|+++|+++.. ...+.............++...... ...... ..........|
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSW 230 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccH
Confidence 999999999999999999997531 1111111110001123444332110 000000 00000122456
Q ss_pred HHHHhccc----ccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHh-HHHhhhhcccccccccCCCCCCcEEEEecch
Q 007257 152 DEFLHLGK----VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHET-IATFVSGVDLFLDQFEDKMTVDDVYLSFLPL 226 (611)
Q Consensus 152 ~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 226 (611)
++++.... .......+..++++++|+|||||||.||||+++|.+ +..........+ ....++++++..|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~ 305 (647)
T PTZ00237 231 YDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII-----EKDIPTVVFSHSSI 305 (647)
T ss_pred HHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc-----CCCCCcEEEEcCCC
Confidence 66654321 111223445789999999999999999999999998 443322222222 56678999999999
Q ss_pred hhHHHHHHHHHHhhcCceEEEecCC-------hHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 007257 227 AHILDRVIEEYFFRRGASVGYYHGD-------LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDAL 299 (611)
Q Consensus 227 ~~~~g~~~~~~~l~~G~~~~~~~~~-------~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 299 (611)
+|+.+...++.++..|+++++++.+ +..+++.++++++|+++++|++++.|.+......
T Consensus 306 ~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-------------- 371 (647)
T PTZ00237 306 GWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEAT-------------- 371 (647)
T ss_pred ceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccc--------------
Confidence 9987766677889999999998652 5789999999999999999999998865311000
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeecc
Q 007257 300 YKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCF 379 (611)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~ 379 (611)
..... ..+++||.+++||+++++++.+++.+.+|+++++.||+||+++.+....
T Consensus 372 ------------------~~~~~--------~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~ 425 (647)
T PTZ00237 372 ------------------IIRSK--------YDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCY 425 (647)
T ss_pred ------------------ccccc--------cCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccC
Confidence 00001 1125899999999999999999999999999999999999997655443
Q ss_pred CCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecC---CcccccCCChHhhhhhcc--CCccccCceEEE
Q 007257 380 PDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTRESII--DGWFHTGDIGQI 454 (611)
Q Consensus 380 ~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~--~g~~~TGD~~~~ 454 (611)
.......+++|.|+++++++|+| +++ .+++.|+.|||++++| +++.|||++++.+.+.|. +|||+|||+|++
T Consensus 426 ~~~~~~~~s~G~p~~g~~~~i~d-~~g--~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~ 502 (647)
T PTZ00237 426 GHINIPYNATGVPSIFIKPSILS-EDG--KELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFK 502 (647)
T ss_pred CCCCCCCCCCccCcCCceEEEEC-CCC--CCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEE
Confidence 32223347899999999999998 544 4556778999999986 789999999999988773 799999999999
Q ss_pred ccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcH
Q 007257 455 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSF 531 (611)
Q Consensus 455 ~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~ 531 (611)
|+||++++.||.||+|++ +|++|+|.+||++|.+||.|.||+|++.+++ +.++|+|+++++..
T Consensus 503 d~dG~l~i~GR~dd~i~~-~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~------------- 568 (647)
T PTZ00237 503 DENGYYTIVSRSDDQIKI-SGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQS------------- 568 (647)
T ss_pred CCCCeEEEEeccCCEEEE-CCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCcc-------------
Confidence 999999999999999997 8999999999999999999999999998865 58999999875320
Q ss_pred HHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 532 LELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 532 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
......+.+.++|+++++ ++|+.+++|+.|+++++. |+|++||++|+.|++.+.
T Consensus 569 ----~~~~~~~~l~~~i~~~~~-~~l~~~~~P~~i~~v~~l------P~T~sGKi~R~~Lr~~~~ 622 (647)
T PTZ00237 569 ----NQSIDLNKLKNEINNIIT-QDIESLAVLRKIIIVNQL------PKTKTGKIPRQIISKFLN 622 (647)
T ss_pred ----ccCCCHHHHHHHHHHHHH-hhcCccccCcEEEEcCCC------CCCCCccEeHHHHHHHHc
Confidence 000011234556677775 679999999999999765 999999999999999874
No 17
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.5e-68 Score=588.71 Aligned_cols=509 Identities=17% Similarity=0.169 Sum_probs=397.6
Q ss_pred cCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 5 KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 5 ~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
.+||++|+++. ..+.+..+++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||+++|++++|+++
T Consensus 101 ~~~~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 101 GNGDKIAIYWE---GNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCCCEEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCC
Confidence 48999999985 333445689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhHHH---------Hhcccccc---ccCccEEEEecCCcHHHHHHhhhCCCceeeHH
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKVKE---------LLSPDCRS---AQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 152 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~~~---------~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (611)
.++.+++..+|++++|+++|+++..... +....... ......++......................|+
T Consensus 178 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (666)
T PLN02654 178 GFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQ 257 (666)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHH
Confidence 9999999999999999999998764221 00000000 01111222222111000000000001122355
Q ss_pred HHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhh-hhcccccccccCCCCCCcEEEEecchhhHHH
Q 007257 153 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFV-SGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 231 (611)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 231 (611)
++.... ..........++++++|+|||||||.||||+++|.+++... ..+...+ +++.+|++++..|++|..+
T Consensus 258 ~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g 331 (666)
T PLN02654 258 DVVPNY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-----DYKPTDVYWCTADCGWITG 331 (666)
T ss_pred HHhhcC-CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-----CCCCCcEEEEcCCchhhhh
Confidence 554322 11122334578999999999999999999999999976443 3333334 7888999999999999999
Q ss_pred HHH-HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 007257 232 RVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 305 (611)
Q Consensus 232 ~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
... ++.+++.|+++++++. ++..+++.|+++++|+++++|+++..|.+.....
T Consensus 332 ~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~--------------------- 390 (666)
T PLN02654 332 HSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEY--------------------- 390 (666)
T ss_pred hHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccc---------------------
Confidence 776 5667999999999863 6899999999999999999999999886531110
Q ss_pred HHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC---CceeeccccCCCCCceeeccCCC
Q 007257 306 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC---AFLVQGYGLTETCGPTTVCFPDE 382 (611)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~---~~v~~~yG~tE~g~~~~~~~~~~ 382 (611)
.... .+++||.++++|++++++..+++.+.+| +++.+.||+||+++......+..
T Consensus 391 --------------~~~~--------~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~ 448 (666)
T PLN02654 391 --------------VTRH--------SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA 448 (666)
T ss_pred --------------cccC--------ChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCC
Confidence 0011 1248999999999999999999999887 78999999999998766554432
Q ss_pred -ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEec--CCcccccCCChHhhhhhc---cCCccccCceEEEcc
Q 007257 383 -MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--KTLFSGYYKNPDLTRESI---IDGWFHTGDIGQILP 456 (611)
Q Consensus 383 -~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~ 456 (611)
...++++|.|++|++++|+| +++. +++.++.|||++++ |+++.|||++++.+...| .+|||+|||+|++|+
T Consensus 449 ~~~~~gs~G~p~~g~~v~i~d-~~g~--~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~ 525 (666)
T PLN02654 449 WPQKPGSATFPFFGVQPVIVD-EKGK--EIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK 525 (666)
T ss_pred CCCCCCccCCCCCCceEEEEC-CCCC--CCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC
Confidence 34568999999999999998 5554 34566789999999 789999999999888776 379999999999999
Q ss_pred CCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHH
Q 007257 457 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLE 533 (611)
Q Consensus 457 dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~ 533 (611)
||+++++||.||+|++ +|++|+|.+||++|.+||+|.|++|++.++. +.++|+|+++++.
T Consensus 526 dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~---------------- 588 (666)
T PLN02654 526 DGYYWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGV---------------- 588 (666)
T ss_pred CCcEEEeeeccCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCC----------------
Confidence 9999999999999997 8999999999999999999999999998765 4899999988643
Q ss_pred HhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 534 LCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 534 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
. ..+.+.++|+++++ .+|+.+++|+.|+++++. |+|.+||++|++|++.+..
T Consensus 589 --~---~~~~l~~~l~~~~~-~~L~~~~~P~~i~~v~~l------P~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 589 --P---YSEELRKSLILTVR-NQIGAFAAPDKIHWAPGL------PKTRSGKIMRRILRKIASR 640 (666)
T ss_pred --C---CCHHHHHHHHHHHH-HhCCCCcCCCEEEECCCC------CCCCCcCchHHHHHHHHcC
Confidence 1 11234456666665 789999999999998665 9999999999999998754
No 18
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-67 Score=578.19 Aligned_cols=528 Identities=21% Similarity=0.272 Sum_probs=414.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. +...+.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 58 ~a~~~pd~~a~~~~---~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vp 134 (624)
T PRK12582 58 WAAEAPDRPWLAQR---EPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAP 134 (624)
T ss_pred HHHHCCCchheecc---cCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEee
Confidence 57889999999876 333456789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCh-----hHHHHHHhhcCccEEEEcchh-HHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH
Q 007257 82 LYDTLGP-----GAVNFILDHAEIDFVFVQDKK-VKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL 155 (611)
Q Consensus 82 l~~~~~~-----~~l~~~l~~~~~~~li~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (611)
++|.++. +++.++++.++++++|+++.. .......... ... .++.++.... ......+.++.
T Consensus 135 l~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~-~~i~~~~~~~---------~~~~~~~~~~~ 202 (624)
T PRK12582 135 VSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL--LDV-TVVHVTGPGE---------GIASIAFADLA 202 (624)
T ss_pred ccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh--cCc-eEEEEcCCCc---------ccccccHHHHh
Confidence 9999885 899999999999999998642 2221111111 112 2333332110 01123445544
Q ss_pred hcccccC--CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCC---CCcEEEEecchhhHH
Q 007257 156 HLGKVNE--MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT---VDDVYLSFLPLAHIL 230 (611)
Q Consensus 156 ~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~---~~~~~l~~~p~~~~~ 230 (611)
....... .......++++++++|||||||.||||++||.++........... ... ..+++++++|++|.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~~~~~~~l~~lPl~h~~ 277 (624)
T PRK12582 203 ATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR-----PREPDPPPPVSLDWMPWNHTM 277 (624)
T ss_pred hcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc-----cccCCCCCceEEEechHHHHH
Confidence 3221110 111234678999999999999999999999999988766543332 222 257999999999999
Q ss_pred HHHHH-HHHhhcCceEEEecC--C---hHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 007257 231 DRVIE-EYFFRRGASVGYYHG--D---LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 304 (611)
Q Consensus 231 g~~~~-~~~l~~G~~~~~~~~--~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
|+... +.++..|+++++.+. . ...+++.++++++|+++++|.++..|.+.....
T Consensus 278 g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~-------------------- 337 (624)
T PRK12582 278 GGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKD-------------------- 337 (624)
T ss_pred hHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhC--------------------
Confidence 98764 456889999988753 2 345677788999999999999998886533211
Q ss_pred HHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc------CCceeeccccCCCCCceeec
Q 007257 305 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC------CAFLVQGYGLTETCGPTTVC 378 (611)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~------~~~v~~~yG~tE~g~~~~~~ 378 (611)
+.. ....+++||.+++||+++++++.++|.+.+ ++++++.||+||++.++...
T Consensus 338 -------------~~~--------~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~ 396 (624)
T PRK12582 338 -------------DAL--------RRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGT 396 (624)
T ss_pred -------------HHH--------HHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecc
Confidence 000 111224899999999999999999998752 36899999999998776533
Q ss_pred cCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEE-c-
Q 007257 379 FPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQI-L- 455 (611)
Q Consensus 379 ~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~-~- 455 (611)
... ....+++|.|++++++++++ .|+.|||+|+|++++.||+++++.+.+.| .+|||+|||+|++ |
T Consensus 397 ~~~-~~~~~svG~p~pg~~v~i~~----------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~ 465 (624)
T PRK12582 397 HWD-TERVGLIGLPLPGVELKLAP----------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDP 465 (624)
T ss_pred cCC-CCCCCCCCcCCCCcEEEEcc----------CCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCC
Confidence 322 23458999999999999975 34579999999999999999999999999 6899999999998 4
Q ss_pred --cCCeEEEEeccCCeEEcCCceecCcHHHH--HHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcH
Q 007257 456 --PNGVVKIIDRKKNLIKISQGEYVALEYLE--NVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSF 531 (611)
Q Consensus 456 --~dG~l~~~GR~~d~i~~~~G~~v~~~~iE--~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~ 531 (611)
++|++++.||.||+|++++|++|+|.+|| .++.+||.|.+|+|+|.+ ...+.++|+++......+....+ ...
T Consensus 466 ~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~-~~~~g~lv~p~~~~~~~~~~~~~--~~~ 542 (624)
T PRK12582 466 DDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQD-RAFIGLLAWPNPAACRQLAGDPD--AAP 542 (624)
T ss_pred cCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCC-CCcEEEEEecCHHHHHHHHhcCC--CCH
Confidence 46999999999999998789999998885 678999999999999986 66788898988766443322211 223
Q ss_pred HHHhccHHHHHHHHHHHHHHHHhCCCCCcc-eeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhh
Q 007257 532 LELCSLVQLQNYILSELKNAAERNKLRGFE-HIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKL 606 (611)
Q Consensus 532 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~ 606 (611)
.+.++.+++.+.+.+.|.++++ .++.+. +|+++.+++++|+.+..++|++||++|+++.+.|+++||++|+..
T Consensus 543 ~~~~~~~~l~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ly~~~ 616 (624)
T PRK12582 543 EDVVKHPAVLAILREGLSAHNA--EAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVERLYAEP 616 (624)
T ss_pred HHHhcCHHHHHHHHHHHHHHHh--hcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHHHhcCC
Confidence 4556778899999999999965 689999 999999999999989999999999999999999999999999854
No 19
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=6.1e-68 Score=577.83 Aligned_cols=516 Identities=21% Similarity=0.184 Sum_probs=396.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++||++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 16 ~~~~~p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vp 86 (563)
T PLN02860 16 LATLRGNAVVTISG---N------RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAP 86 (563)
T ss_pred HHHhcCCceEEecC---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEe
Confidence 57889999999865 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.+++++++++++++++..............+....++..++....... .......++++.......
T Consensus 87 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 162 (563)
T PLN02860 87 LNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFI----FLNSFLTTEMLKQRALGT 162 (563)
T ss_pred CCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccccccc----chhhccccchhccCcccc
Confidence 9999999999999999999999998754221111111112233333333322100000 000011111111111011
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.++|.++..........+ ++..+|+++...|++|.+++...+.++..
T Consensus 163 ~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~ 237 (563)
T PLN02860 163 TELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-----GYGEDDVYLHTAPLCHIGGLSSALAMLMV 237 (563)
T ss_pred ccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-----CCCCCCEEEEecCchhhccHHHHHHHHHc
Confidence 1111234678999999999999999999999999987766554444 67889999999999999998877888999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++.+. ++..+++.++++++|+++++|+++..|.+......
T Consensus 238 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~----------------------------------- 282 (563)
T PLN02860 238 GACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSM----------------------------------- 282 (563)
T ss_pred CceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhh-----------------------------------
Confidence 999988876 99999999999999999999999998875321110
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCC-----------------
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE----------------- 382 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~----------------- 382 (611)
....++++|.+++||+++++++.+.+.+.| +.++++.||+||+++.+.......
T Consensus 283 --------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (563)
T PLN02860 283 --------TWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTK 354 (563)
T ss_pred --------ccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccc
Confidence 001225899999999999999999999988 789999999999986554322111
Q ss_pred -----ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEcc
Q 007257 383 -----MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILP 456 (611)
Q Consensus 383 -----~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~ 456 (611)
.....++|.|++++++++++ ++ .++.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++|+
T Consensus 355 ~~~~~~~~~~~vG~p~~~~~v~i~~-~~-------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~ 426 (563)
T PLN02860 355 SSSVHQPQGVCVGKPAPHVELKIGL-DE-------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK 426 (563)
T ss_pred cccccccCCcccCCccCCcEEEEec-CC-------CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC
Confidence 11123689999999999998 33 45689999999999999999999999888 689999999999999
Q ss_pred CCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHH
Q 007257 457 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLE 533 (611)
Q Consensus 457 dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~ 533 (611)
||++++.||.+|+|++ +|++|+|.+||+++.+||+|.+|+|++.++. +.++|+|+++++.... ..+..
T Consensus 427 dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~--~~~~~------ 497 (563)
T PLN02860 427 AGNLWLIGRSNDRIKT-GGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWS--DNEKE------ 497 (563)
T ss_pred CCCEEEeecccceeEE-CCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccc--cccch------
Confidence 9999999999999997 9999999999999999999999999997765 4899999987642100 00000
Q ss_pred HhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHH
Q 007257 534 LCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQL 602 (611)
Q Consensus 534 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~ 602 (611)
..........+.|.+++++..|+.|++|+.++++.+. +|+|++||++|++|++++.+.+..+
T Consensus 498 --~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~-----lP~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 498 --NAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKP-----FPLTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred --hhcccccccHHHHHHHHhhCcccccccceEEEEEecC-----CCCCcccchhHHHHHHHHHHHHhcc
Confidence 0000001123456666654469999999998876332 4899999999999999997766554
No 20
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.4e-67 Score=581.44 Aligned_cols=514 Identities=17% Similarity=0.142 Sum_probs=397.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++|+++|+++. +.+.+..+++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 61 ~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vp 137 (628)
T TIGR02316 61 HLDERGEQLALVTV---SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSV 137 (628)
T ss_pred HhCcCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEe
Confidence 45678999999986 434455689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhH---------HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKV---------KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 152 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (611)
+++.++.+++.++|++++|+++|+++... ..+.............++.++..... ..........|.
T Consensus 138 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~----~~~~~~~~~~~~ 213 (628)
T TIGR02316 138 VFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAP----MRLIPGRDVDYA 213 (628)
T ss_pred cCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC----cCcccCccccHH
Confidence 99999999999999999999999986431 11111111111223445555432100 000011123555
Q ss_pred HHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhh-hhcccccccccCCCCCCcEEEEecchhhHHH
Q 007257 153 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFV-SGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 231 (611)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 231 (611)
++...............++++++|+|||||||.||||+++|.++.... ......+ ++..+|++++..|++|..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g 288 (628)
T TIGR02316 214 ALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-----GIRAGQVMFSASDVGWVVG 288 (628)
T ss_pred HHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCcEEEEcCCCCeeeh
Confidence 554432222222233567999999999999999999999999976433 3333333 6788999999999999998
Q ss_pred HHH-HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 007257 232 RVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 305 (611)
Q Consensus 232 ~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
+.. ++.++..|+++++++. ++..+++.++++++|+++++|++++.|.+....
T Consensus 289 ~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---------------------- 346 (628)
T TIGR02316 289 HSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAA---------------------- 346 (628)
T ss_pred hhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc----------------------
Confidence 765 6667999999999863 688999999999999999999999877542100
Q ss_pred HHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC---
Q 007257 306 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE--- 382 (611)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~--- 382 (611)
... ...+++||.+++||+++++++.+++.+.+|.++++.||+||++..++....+.
T Consensus 347 -------------~~~--------~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~ 405 (628)
T TIGR02316 347 -------------WLR--------KHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLDLK 405 (628)
T ss_pred -------------ccc--------cCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCCcC
Confidence 000 11225999999999999999999999989999999999999986544433221
Q ss_pred ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecC---CcccccCCChHhhhhhc----cCCccccCceEEEc
Q 007257 383 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTRESI----IDGWFHTGDIGQIL 455 (611)
Q Consensus 383 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGD~~~~~ 455 (611)
....+++|.|+++++++++| +++ ..+++.++.|||+++|| +.+.+|+++++.+.+.+ .++||+|||+|++|
T Consensus 406 ~~~~gs~G~p~~g~~v~i~d-~~~-g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d 483 (628)
T TIGR02316 406 PVKLGSPGLPMYGYHLRVLD-EAT-GRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRD 483 (628)
T ss_pred CCCCCCcccCcCCceEEEEE-CCC-CCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEc
Confidence 23347889999999999998 432 24566788999999998 56789999998877654 46799999999999
Q ss_pred cCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHH
Q 007257 456 PNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFL 532 (611)
Q Consensus 456 ~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~ 532 (611)
+||+++++||.||+||+ +|++|+|.+||++|.+||+|.||+|++.++. +.++++|+++++.. .
T Consensus 484 ~dG~l~i~GR~dd~ik~-~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~--------~----- 549 (628)
T TIGR02316 484 EDGYTFILGRTDDVINV-AGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDS--------A----- 549 (628)
T ss_pred CCCcEEEEEcCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcc--------c-----
Confidence 99999999999999997 8999999999999999999999999998765 37889998875420 0
Q ss_pred HHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 533 ELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 533 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
.+......+.++|+++++ ++|+.|++|+.|+++++. |+|++||++|++|++.+.
T Consensus 550 ---~~~~~~~~~~~~i~~~~~-~~L~~~~~P~~v~~v~~l------P~t~sGKi~r~~L~~~~~ 603 (628)
T TIGR02316 550 ---GDAHDPHAVETGMMDCVV-RQLGAVARPARVYFVAAL------PKTRSGKLLRRSIQALAE 603 (628)
T ss_pred ---ccccchHHHHHHHHHHHH-HhcCCCcCCCEEEEcCCC------CCCCchHHHHHHHHHHHc
Confidence 000011234456666665 779999999999998765 999999999999998764
No 21
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.8e-67 Score=579.85 Aligned_cols=507 Identities=18% Similarity=0.212 Sum_probs=402.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. +.+.+..+++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 66 ~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~ 142 (625)
T TIGR02188 66 HLEARPDKVAIIWE---GDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSV 142 (625)
T ss_pred hhccCCCCeEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEec
Confidence 46779999999987 333456789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHH---------HHhcccccccc-CccEEEEecCCcHHHHHHhhhCCCceeeH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVK---------ELLSPDCRSAQ-RLRVMVCFTSLTAEQKEMAVQTGIKPYSW 151 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~---------~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 151 (611)
+++.++.+++.++++.++++++|+++.... .+.... ...+ .+..+++++...... . ........|
T Consensus 143 i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 217 (625)
T TIGR02188 143 VFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEAL-EKCPVSVEHVLVVRRTGNPV---P-WVEGRDVWW 217 (625)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHH-HhCCCCccEEEEEcCCCCCc---C-ccccccccH
Confidence 999999999999999999999999875321 111111 1112 344455543321100 0 000112345
Q ss_pred HHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhh-cccccccccCCCCCCcEEEEecchhhHH
Q 007257 152 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG-VDLFLDQFEDKMTVDDVYLSFLPLAHIL 230 (611)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 230 (611)
+++.... ..........++++++|+|||||||.||+|+++|.++...... ....+ ++..+|++++..|++|..
T Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~ 291 (625)
T TIGR02188 218 HDLMAKA-SAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVF-----DIKDGDIFWCTADVGWIT 291 (625)
T ss_pred HHHHhhc-CCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhcc-----CCCCCcEEEECCCchhhh
Confidence 5555432 2222334567889999999999999999999999998655433 22233 678899999999999998
Q ss_pred HHHH-HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 007257 231 DRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 304 (611)
Q Consensus 231 g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
+... ++.++..|+++++++. ++..+++.++++++|+++++|++++.|.+.....
T Consensus 292 g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-------------------- 351 (625)
T TIGR02188 292 GHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEW-------------------- 351 (625)
T ss_pred ccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcc--------------------
Confidence 8765 6667999999999853 7899999999999999999999998886532110
Q ss_pred HHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC---CceeeccccCCCCCceeeccCC
Q 007257 305 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC---AFLVQGYGLTETCGPTTVCFPD 381 (611)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~---~~v~~~yG~tE~g~~~~~~~~~ 381 (611)
.+. ..+++||.++++|+++++++.+++.+.++ +++++.||+||+++.+....+.
T Consensus 352 ---------------~~~--------~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~ 408 (625)
T TIGR02188 352 ---------------VKK--------HDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG 408 (625)
T ss_pred ---------------ccc--------CCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC
Confidence 000 11258999999999999999999998875 7899999999999876655443
Q ss_pred -CccccCccCCCccCeeEEEeecCCCCCCCCC-CCCCcEEEEec--CCcccccCCChHhhhhhc---cCCccccCceEEE
Q 007257 382 -EMCMVGTAGPVSVYSELRLEEVPEMGYSPLD-DPPCGEVCVRG--KTLFSGYYKNPDLTRESI---IDGWFHTGDIGQI 454 (611)
Q Consensus 382 -~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~-~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~ 454 (611)
....++++|+|++++++++++ +++. +++ .++.|||+|+| |+++.|||++++.+.+.+ .+|||+|||+|++
T Consensus 409 ~~~~~~~~~G~p~~g~~~~i~d-~~g~--~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~ 485 (625)
T TIGR02188 409 ATPTKPGSATLPFFGIEPAVVD-EEGN--PVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARR 485 (625)
T ss_pred CCCcCCCcccCCcCCceEEEEC-CCCC--CCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEE
Confidence 233458899999999999998 5554 344 67899999999 689999999999888776 3799999999999
Q ss_pred ccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcH
Q 007257 455 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSF 531 (611)
Q Consensus 455 ~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~ 531 (611)
|+||++++.||.||+|++ +|++|+|.+||++|.+||+|.||+|++.++. +.++|+|+++++..
T Consensus 486 d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~------------- 551 (625)
T TIGR02188 486 DKDGYIWITGRVDDVINV-SGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYE------------- 551 (625)
T ss_pred cCCCcEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCC-------------
Confidence 999999999999999997 8999999999999999999999999997755 48899999886531
Q ss_pred HHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 532 LELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 532 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.. +.+.++|+++++ +.|+.+++|+.|+++++. |+|++||++|+.|++.+..
T Consensus 552 ----~~----~~~~~~l~~~~~-~~l~~~~~P~~i~~v~~l------P~t~sGKi~r~~l~~~~~~ 602 (625)
T TIGR02188 552 ----PD----DELRKELRKHVR-KEIGPIAKPDKIRFVPGL------PKTRSGKIMRRLLRKIAAG 602 (625)
T ss_pred ----CC----HHHHHHHHHHHH-hhcCCCccCcEEEECCCC------CCCCCccchHHHHHHHHcC
Confidence 11 123455666665 679999999999998665 9999999999999988754
No 22
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=6.4e-67 Score=565.69 Aligned_cols=486 Identities=21% Similarity=0.193 Sum_probs=381.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++|+++|+.+. +. +++||+||.++++++|+.|.+. +||+|+++++|++++++++|||+++|++++|
T Consensus 28 ~~~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~~G~v~vp 96 (539)
T PRK06334 28 LCSEMTTATVCWDE---QL-----GKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLLSGKIPVM 96 (539)
T ss_pred HHHhCCCceEEEeC---CC-----CcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHhcCCeeEe
Confidence 57889999998765 22 4899999999999999999873 8999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcc---
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLG--- 158 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 158 (611)
+++.++.+++.++|+.+++++++++++....+.............++.+++.... ..+.+.....
T Consensus 97 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~~~~~ 164 (539)
T PRK06334 97 INWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE------------LSFWEKCRIGIYM 164 (539)
T ss_pred cCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh------------ccHHHhhhhhhhh
Confidence 9999999999999999999999998776554422111100011123333321100 0000000000
Q ss_pred --cc----cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHH
Q 007257 159 --KV----NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR 232 (611)
Q Consensus 159 --~~----~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~ 232 (611)
.. .........++++++++|||||||.||+|.+||+++..........+ .+..+|++++.+|++|.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~g~ 239 (539)
T PRK06334 165 SIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-----SPKEDDVMMSFLPPFHAYGF 239 (539)
T ss_pred cCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCCCceEEEecchHhhhhh
Confidence 00 00112245679999999999999999999999999988776655554 67889999999999999998
Q ss_pred HH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhh
Q 007257 233 VI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 309 (611)
Q Consensus 233 ~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (611)
.. .+.++..|+++++... ++..+++.|+++++|+++++|++++.|++......
T Consensus 240 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~------------------------ 295 (539)
T PRK06334 240 NSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQE------------------------ 295 (539)
T ss_pred HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcc------------------------
Confidence 75 5667899999988753 89999999999999999999999998875322110
Q ss_pred cCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCccccCc
Q 007257 310 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMVGT 388 (611)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~ 388 (611)
..+++||.+++||+++++++.+++.+.+ ++.+++.||+||++.+++..........++
T Consensus 296 ---------------------~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~ 354 (539)
T PRK06334 296 ---------------------SCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESC 354 (539)
T ss_pred ---------------------cccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCc
Confidence 1125899999999999999999999988 689999999999998776654443334478
Q ss_pred cCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc--cCCccccCceEEEccCCeEEEEecc
Q 007257 389 AGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI--IDGWFHTGDIGQILPNGVVKIIDRK 466 (611)
Q Consensus 389 ~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~--~~g~~~TGD~~~~~~dG~l~~~GR~ 466 (611)
+|+|+++++++++| +++ ..+++.|+.|||+|+|++++.||+++++.+.... .+|||+|||+|++|++|++++.||.
T Consensus 355 vG~p~~g~~v~i~d-~~~-~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~ 432 (539)
T PRK06334 355 VGMPIRGMDVLIVS-EET-KVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRL 432 (539)
T ss_pred CceecCCCEEEEEc-CCC-CccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEecc
Confidence 99999999999998 433 3567788999999999999999999988654322 3679999999999999999999999
Q ss_pred CCeEEcCCceecCcHHHHHHHhcCcCcce------EEEEecCCCC-eEEEEEecChHHHHHHHHHCCCCCcHHHHhccHH
Q 007257 467 KNLIKISQGEYVALEYLENVYCVAPIIED------IWVYGDSLKS-MLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQ 539 (611)
Q Consensus 467 ~d~i~~~~G~~v~~~~iE~~l~~~p~V~~------~~v~~~~~~~-~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (611)
+|+|++ +|++|+|.+||++|.+||+|.+ ++|++.++.. .++++++... +.
T Consensus 433 ~d~ik~-~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------------------~~-- 489 (539)
T PRK06334 433 SRFVKI-GAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEKVRLCLFTTFPT--------------------SI-- 489 (539)
T ss_pred CCeEEE-CCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCceEEEEEEeccC--------------------Ch--
Confidence 999997 9999999999999999999998 7888877554 4455554321 11
Q ss_pred HHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 540 LQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 540 ~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+++++++++..++.|+.|+.+.++++. |+|++||++|++|++....
T Consensus 490 ------~~~~~~l~~~~~~~~~~P~~i~~v~~l------P~t~~GKi~r~~L~~~~~~ 535 (539)
T PRK06334 490 ------SEVNDILKNSKTSSILKISYHHQVESI------PMLGTGKPDYCSLNALAKS 535 (539)
T ss_pred ------HHHHHHHHhcCCcccccchheeeeccc------ccccCCcccHHHHHHHHHH
Confidence 234455544457899999999988765 9999999999999887544
No 23
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-68 Score=502.29 Aligned_cols=491 Identities=19% Similarity=0.179 Sum_probs=418.2
Q ss_pred CccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 1 MSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 1 ~~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
++|+++||++|+++. + +.+||+||++++.++|..|++.|+++||+|.+.+||..+|++++||++++|+.+|
T Consensus 36 ~~A~~~pdriAv~d~---~------~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PV 106 (542)
T COG1021 36 DHAARYPDRIAVIDG---E------RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPV 106 (542)
T ss_pred HHHhhcCCceEEecC---c------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchh
Confidence 368899999999987 3 5799999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhH----HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHh
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKV----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLH 156 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
.--|.....+|.++...+.|+.+|.+.... ..+........+.++.+++.++.... ...+..+ .
T Consensus 107 lALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~-----------~~~~~~~-~ 174 (542)
T COG1021 107 LALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHP-----------SVLEAAL-C 174 (542)
T ss_pred hccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCc-----------chhhhhh-h
Confidence 998999999999999999999999887533 22223333355778888887554321 1122222 2
Q ss_pred cccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH--
Q 007257 157 LGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-- 234 (611)
Q Consensus 157 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-- 234 (611)
..........+.++++++++..+.||||.||.|..+|.....++......+ +++..++++|.+|..|.+.++.
T Consensus 175 ~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-----~~~~~tvyL~~LP~AHNfplssPG 249 (542)
T COG1021 175 HPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-----GFDQQTVYLCALPAAHNFPLSSPG 249 (542)
T ss_pred CccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-----CcCccceEEEecccccCCCCCCcc
Confidence 222334445677889999999999999999999999999999999888888 8999999999999999999875
Q ss_pred HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCC
Q 007257 235 EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQ 313 (611)
Q Consensus 235 ~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (611)
.+..++.|+++|+.+. +|...+.+|+++++|+...+|.....+++..+...
T Consensus 250 ~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~---------------------------- 301 (542)
T COG1021 250 ALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWER---------------------------- 301 (542)
T ss_pred hhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhccc----------------------------
Confidence 7778999999999877 99999999999999999999999999887654322
Q ss_pred CCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCc
Q 007257 314 REASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS 393 (611)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~ 393 (611)
..++|||.+-+||+.+++.+.+++...+|+.+.+.|||.|.-...+...+.......+-|+|+
T Consensus 302 -----------------~~LsSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPl 364 (542)
T COG1021 302 -----------------ADLSSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPL 364 (542)
T ss_pred -----------------CCchheeEEeecCcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchHheeecCCCcC
Confidence 223599999999999999999999999999999999999966555554443333345667776
Q ss_pred -cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEE
Q 007257 394 -VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIK 471 (611)
Q Consensus 394 -~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~ 471 (611)
|.-+++|+| .++ .++++||.|+|..+||+-++||++.|+.+.++| .+|||+|||+.++|+||++.+.||.+|+|+
T Consensus 365 sP~DEvrvvD-~dg--~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQIN 441 (542)
T COG1021 365 SPDDEVRVVD-ADG--NPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQIN 441 (542)
T ss_pred CCcceeEEec-CCC--CCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhc
Confidence 788999999 666 477888999999999999999999999999999 899999999999999999999999999999
Q ss_pred cCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHH
Q 007257 472 ISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSEL 548 (611)
Q Consensus 472 ~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (611)
++|++|..+|||+.|..||.|.+|++|+.+|. ++.+|+|++++... +. .+|
T Consensus 442 -RgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~~-----------------~~--------~ql 495 (542)
T COG1021 442 -RGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPPL-----------------RA--------AQL 495 (542)
T ss_pred -cccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCCC-----------------CH--------HHH
Confidence 79999999999999999999999999998876 69999999987531 22 245
Q ss_pred HHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 549 KNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 549 ~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+.++.+..+..|++|.+|.+++. +|.|+-|||+|++|++.+..
T Consensus 496 r~~L~~~GlAa~K~PDrie~v~~------~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 496 RRFLRERGLAAFKLPDRIEFVDS------LPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred HHHHHHcchhhhcCCcceeeccc------CCCcccccccHHHHHHHhhh
Confidence 55555889999999999999865 49999999999999998764
No 24
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.1e-66 Score=570.16 Aligned_cols=509 Identities=22% Similarity=0.240 Sum_probs=397.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++... ++.....+++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||+++| +++|
T Consensus 34 ~a~~~p~~~Al~~~~~-~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~p 111 (632)
T PRK07529 34 AAARHPDAPALSFLLD-ADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANP 111 (632)
T ss_pred HHHHCCCCceEEeecc-cCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEe
Confidence 5788999999987511 1122345799999999999999999999999999999999999999999999999999 5699
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhH-----HHHhccccccccCccEEEEecCCcHH-H-HHHhh-----hCCCcee
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKV-----KELLSPDCRSAQRLRVMVCFTSLTAE-Q-KEMAV-----QTGIKPY 149 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~-----~~~~~~~ 149 (611)
+++.++++++.++++.++++++|+++... ..+... ....+.++.++.++..... . ..... .......
T Consensus 112 i~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (632)
T PRK07529 112 INPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEV-LAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARIL 190 (632)
T ss_pred CCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHH-HhcCCcceeEEEecCcccccccccccccccccccccccC
Confidence 99999999999999999999999976432 111111 1122445555555432100 0 00000 0112234
Q ss_pred eHHHHHhcccccC-CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhh
Q 007257 150 SWDEFLHLGKVNE-MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAH 228 (611)
Q Consensus 150 ~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~ 228 (611)
.|.+.+....... .......++++++++|||||||.||+|.+||.++...+......+ .+..++++++.+|++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h 265 (632)
T PRK07529 191 DFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-----GLGPGDTVFCGLPLFH 265 (632)
T ss_pred CHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-----CCCCCCEEEEecCchh
Confidence 5555544432221 112234679999999999999999999999999988776655555 6788999999999999
Q ss_pred HHHHHH-HHHHhhcCceEEEecC----C---hHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 007257 229 ILDRVI-EEYFFRRGASVGYYHG----D---LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALY 300 (611)
Q Consensus 229 ~~g~~~-~~~~l~~G~~~~~~~~----~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 300 (611)
.++... .+.++..|+++++.+. + ...+++.++++++|++.++|+++..|.+....
T Consensus 266 ~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~----------------- 328 (632)
T PRK07529 266 VNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD----------------- 328 (632)
T ss_pred hhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-----------------
Confidence 999876 5667999999998753 2 35788999999999999999999988642100
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccC
Q 007257 301 KYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFP 380 (611)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~ 380 (611)
...+++||.+++||+++++++.+.|.+.+|+++++.||+||+++++..+..
T Consensus 329 -----------------------------~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~ 379 (632)
T PRK07529 329 -----------------------------GHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPP 379 (632)
T ss_pred -----------------------------CCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCc
Confidence 011258999999999999999999999999999999999999987776655
Q ss_pred CCccccCccCCCccCeeEEEeecCCCCC--CCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccC
Q 007257 381 DEMCMVGTAGPVSVYSELRLEEVPEMGY--SPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPN 457 (611)
Q Consensus 381 ~~~~~~~~~G~~~~~~~v~i~~~~~~~~--~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~d 457 (611)
......+++|.|+|+++++++..++++. .+++.|+.|||+|+||+++.||++++. +...| .+|||+|||+|++|+|
T Consensus 380 ~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~d 458 (632)
T PRK07529 380 DGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDAD 458 (632)
T ss_pred cccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCC
Confidence 4444568999999999999976333331 567788999999999999999998654 45555 7899999999999999
Q ss_pred CeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHH
Q 007257 458 GVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLEL 534 (611)
Q Consensus 458 G~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~ 534 (611)
|++++.||.||+|++ +|++|+|.+||+.|.+||+|.+|+|++.++. +.++|+|++.++.. .
T Consensus 459 G~l~i~GR~~d~i~~-~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~--------~------- 522 (632)
T PRK07529 459 GYFWLTGRAKDLIIR-GGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGAS--------A------- 522 (632)
T ss_pred ceEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCC--------C-------
Confidence 999999999999996 9999999999999999999999999997765 47899999876420 0
Q ss_pred hccHHHHHHHHHHHHHHHHhCCCC-CcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 535 CSLVQLQNYILSELKNAAERNKLR-GFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 535 ~~~~~~~~~~~~~l~~~~~~~~l~-~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+. +++.++++ .+++ .+++|+.|.++++. |+|++||++|++|++.+..
T Consensus 523 -~~--------~~l~~~~~-~~l~~~~~~P~~i~~v~~l------P~t~~GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 523 -TE--------AELLAFAR-DHIAERAAVPKHVRILDAL------PKTAVGKIFKPALRRDAIR 570 (632)
T ss_pred -CH--------HHHHHHHH-HhcchhccCCcEEEEecCC------CCCCCCcccHHHHHHHHHH
Confidence 11 23344443 4554 57899999999765 9999999999999998744
No 25
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-66 Score=571.30 Aligned_cols=507 Identities=19% Similarity=0.222 Sum_probs=400.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++||++|+++. +..++..+++||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 76 ~~~~~p~~~Al~~~---~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~ 152 (637)
T PRK00174 76 HLKTRGDKVAIIWE---GDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSV 152 (637)
T ss_pred hhccCCCCeEEEEE---CCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEe
Confidence 46789999999986 333345689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHH---------HHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVK---------ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 152 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (611)
+++.++.+++.++++.++++++|+++.... .+... ....+....++......... .........|+
T Consensus 153 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 227 (637)
T PRK00174 153 VFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEA-LANCPSVEKVIVVRRTGGDV----DWVEGRDLWWH 227 (637)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHH-HHhCCCccEEEEEcCCCCCc----CcCCCCcccHH
Confidence 999999999999999999999999865321 11111 11123444555544221100 00011233455
Q ss_pred HHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhc-ccccccccCCCCCCcEEEEecchhhHHH
Q 007257 153 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGV-DLFLDQFEDKMTVDDVYLSFLPLAHILD 231 (611)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~g 231 (611)
++.... ..........++++++++|||||||.||+|+++|.+++...... ...+ ++..+|++++..|++|..+
T Consensus 228 ~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~ 301 (637)
T PRK00174 228 ELVAGA-SDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF-----DYKDGDVYWCTADVGWVTG 301 (637)
T ss_pred HHHhhc-CCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-----CCCCCcEEEEcCCchHhhh
Confidence 555432 22222334577899999999999999999999999987554332 2223 6778899999999999988
Q ss_pred HHH-HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 007257 232 RVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 305 (611)
Q Consensus 232 ~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
... ++.++..|+++++++. ++..+++.|+++++|++.++|++++.|.+......
T Consensus 302 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-------------------- 361 (637)
T PRK00174 302 HSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHP-------------------- 361 (637)
T ss_pred hHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCccc--------------------
Confidence 765 6667999999999753 68999999999999999999999988865311100
Q ss_pred HHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC---CceeeccccCCCCCceeeccCCC
Q 007257 306 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC---AFLVQGYGLTETCGPTTVCFPDE 382 (611)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~---~~v~~~yG~tE~g~~~~~~~~~~ 382 (611)
....+++||.++++|+++++++.+++.+.++ +++++.||+||+++......+..
T Consensus 362 -----------------------~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 418 (637)
T PRK00174 362 -----------------------KKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA 418 (637)
T ss_pred -----------------------ccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC
Confidence 0011248999999999999999999998875 78999999999998766544332
Q ss_pred -ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEec--CCcccccCCChHhhhhhc---cCCccccCceEEEcc
Q 007257 383 -MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--KTLFSGYYKNPDLTRESI---IDGWFHTGDIGQILP 456 (611)
Q Consensus 383 -~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~ 456 (611)
...++++|.|+++++++++| +++. +++.++.|||+|+| |+++.||+++++.+.+.+ .+|||+|||+|++|+
T Consensus 419 ~~~~~~~vG~p~~g~~~~i~d-~~g~--~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~ 495 (637)
T PRK00174 419 TPLKPGSATRPLPGIQPAVVD-EEGN--PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDE 495 (637)
T ss_pred CCcCCCcccCCCCCceEEEEC-CCCC--CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcC
Confidence 23457899999999999998 5554 45677899999999 689999999999888776 478999999999999
Q ss_pred CCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHH
Q 007257 457 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLE 533 (611)
Q Consensus 457 dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~ 533 (611)
||++++.||.||+|++ +|++|+|.+||++|.+||+|.+|+|++.++. +.++|+|++.++..
T Consensus 496 dG~l~~~GR~dd~ik~-~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~--------------- 559 (637)
T PRK00174 496 DGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEE--------------- 559 (637)
T ss_pred CCcEEEEEecccEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCC---------------
Confidence 9999999999999997 8999999999999999999999999997654 47999999876430
Q ss_pred HhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 534 LCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 534 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.. +.+.++|+++++ +.|+.+++|..++++++. |+|++||++|++|++.+..
T Consensus 560 --~~----~~~~~~l~~~l~-~~l~~~~~P~~i~~v~~l------P~t~~GKi~R~~L~~~~~~ 610 (637)
T PRK00174 560 --PS----DELRKELRNWVR-KEIGPIAKPDVIQFAPGL------PKTRSGKIMRRILRKIAEG 610 (637)
T ss_pred --CC----HHHHHHHHHHHH-hhcCCccCCCEEEEcCCC------CCCCCcchHHHHHHHHHcC
Confidence 01 223345666664 679999999999998665 9999999999999987643
No 26
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-67 Score=568.35 Aligned_cols=487 Identities=20% Similarity=0.198 Sum_probs=395.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 58 ~a~~~pd~~Al~~~---~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 58 AARRAPDRAALIDE---R------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred HHHHCCCceEEEEC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 57889999999976 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.+++++++++++|++++....+... .........++...+... .....+..++++......
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~- 199 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSAL-PPDLGRLRAWGGNPDDDE-------PSGSTDETLDDLIAGSST- 199 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhh-ccccccceEEEEecCccc-------cCCcCcccHHHHhcCCCC-
Confidence 99999999999999999999999998765544322 112222333322221110 011234566666544321
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
...+..++++++++|||||||.||+|.++|.++...+......+ .+..++++++..|++|.+|+...+.++..
T Consensus 200 --~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~l~~ 272 (549)
T PRK07788 200 --APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-----PFRAGETTLLPAPMFHATGWAHLTLAMAL 272 (549)
T ss_pred --CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-----CCCcCCeEEEccchHHHHHHHHHHHHHHh
Confidence 12233467889999999999999999999999988877665555 67788999999999999998877778999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++... ++..+++.++++++|+++++|+++..+++.......
T Consensus 273 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~---------------------------------- 318 (549)
T PRK07788 273 GSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLA---------------------------------- 318 (549)
T ss_pred CCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccC----------------------------------
Confidence 999988765 999999999999999999999999988653221000
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
...+++||.+++||+++++++.+.+.+.++.++++.||+||++..+..........++++|.|++++++++
T Consensus 319 ---------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i 389 (549)
T PRK07788 319 ---------KYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKI 389 (549)
T ss_pred ---------CCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEE
Confidence 00125899999999999999999999999999999999999987665444332334578999999999999
Q ss_pred eecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCc
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVAL 480 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~ 480 (611)
+| +++. +++.|+.|||+++|+.++.||+++++. ...+|||+|||+|++|+||++++.||.||+|++ +|++|+|
T Consensus 390 ~d-~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~---~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~-~G~~v~p 462 (549)
T PRK07788 390 LD-ENGN--EVPRGVVGRIFVGNGFPFEGYTDGRDK---QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVS-GGENVFP 462 (549)
T ss_pred EC-CCcC--CCCCCCeEEEEEeCCCccccccCCCcc---cccCCceecCceEEEcCCCCEEEeccCcceEEE-CCEEECH
Confidence 98 5543 556688999999999999999998765 345899999999999999999999999999996 9999999
Q ss_pred HHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCC
Q 007257 481 EYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKL 557 (611)
Q Consensus 481 ~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 557 (611)
.+||++|.+||+|.+++|++.++. +.++|+|+++++.. . + .++|+++++ ++|
T Consensus 463 ~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~--------~--------~--------~~~l~~~~~-~~l 517 (549)
T PRK07788 463 AEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAA--------L--------D--------EDAIKDYVR-DNL 517 (549)
T ss_pred HHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCC--------C--------C--------HHHHHHHHH-Hhh
Confidence 999999999999999999997765 37899999876420 0 1 134455554 679
Q ss_pred CCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 558 RGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 558 ~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
+.|++|+.++++++. |+|++||++|++|+++
T Consensus 518 ~~~~~P~~i~~v~~l------P~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 518 ARYKVPRDVVFLDEL------PRNPTGKVLKRELREM 548 (549)
T ss_pred hcCCCCcEEEEeCCC------CCCCCcCEeHHHhhcc
Confidence 999999999998665 9999999999999753
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-66 Score=563.22 Aligned_cols=494 Identities=19% Similarity=0.202 Sum_probs=404.1
Q ss_pred cCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 5 KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 5 ~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
.+||++|+.+. ++. ..+.+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+++
T Consensus 56 ~~~~~~a~~~~---~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v~vpl~~ 130 (570)
T PRK04319 56 GRKDKVALRYL---DAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAIVGPLFE 130 (570)
T ss_pred CCCCceEEEEE---CCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEccccc
Confidence 57999999886 332 3479999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCCc
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEME 164 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (611)
.++.+++.++++.++++++++++......... ..+..+.++.+++... ......++.++..... ....
T Consensus 131 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~ 198 (570)
T PRK04319 131 AFMEEAVRDRLEDSEAKVLITTPALLERKPAD---DLPSLKHVLLVGEDVE--------EGPGTLDFNALMEQAS-DEFD 198 (570)
T ss_pred ccCHHHHHHHHHccCCcEEEEChhhhhccchh---cCCCceEEEEECCCcC--------CCcCccCHHHHHhhcC-CcCC
Confidence 99999999999999999999988765443211 2234455555543211 0112345555554332 1222
Q ss_pred CCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhhcCc
Q 007257 165 ILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGA 243 (611)
Q Consensus 165 ~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~ 243 (611)
..+..++++++++|||||||.||+|.++|.++...+......+ ++..+|++++..|++|.+|+.. ++.++..|+
T Consensus 199 ~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~ 273 (570)
T PRK04319 199 IEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-----DLHEDDVYWCTADPGWVTGTSYGIFAPWLNGA 273 (570)
T ss_pred ccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-----CCCCCceEEecCChHHhhCchHHHHHHHhcCc
Confidence 3345678999999999999999999999999988777665555 6788999999999999988765 666799999
Q ss_pred eEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 244 SVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 244 ~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
++++... ++..+++.++++++|+++++|++++.+.+..... ..
T Consensus 274 ~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-----------------------------------~~ 318 (570)
T PRK04319 274 TNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDL-----------------------------------VK 318 (570)
T ss_pred eEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcc-----------------------------------cc
Confidence 9988754 8999999999999999999999999886421100 00
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEe
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLE 401 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~ 401 (611)
. ..+++||.+++||+++++++.+++.+.+|.++++.||+||+++.+..........++++|.|+|+++++++
T Consensus 319 ~--------~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~ 390 (570)
T PRK04319 319 K--------YDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIV 390 (570)
T ss_pred c--------CCcccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEE
Confidence 0 11248999999999999999999999899999999999999987665444333445889999999999999
Q ss_pred ecCCCCCCCCCCCCCcEEEEec--CCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecC
Q 007257 402 EVPEMGYSPLDDPPCGEVCVRG--KTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVA 479 (611)
Q Consensus 402 ~~~~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~ 479 (611)
+ +++. +++.|+.|||+++| ++++.||+++++.+.+.|.+|||+|||+++++++|++++.||.+|+|++ +|++|+
T Consensus 391 d-~~~~--~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~i~ 466 (570)
T PRK04319 391 D-DQGN--ELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDDVIKT-SGERVG 466 (570)
T ss_pred C-CCCC--CCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCCEEEE-CCEEEC
Confidence 8 5554 34678899999997 8999999999999999999999999999999999999999999999997 899999
Q ss_pred cHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCC
Q 007257 480 LEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNK 556 (611)
Q Consensus 480 ~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (611)
|.+||+.|.+||+|.+++|++.++. +.+++++++.++.. .. +.+.++|.++++ ++
T Consensus 467 p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~-----------------~~----~~~~~~l~~~~~-~~ 524 (570)
T PRK04319 467 PFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYE-----------------PS----EELKEEIRGFVK-KG 524 (570)
T ss_pred HHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCC-----------------CC----HHHHHHHHHHHH-Hh
Confidence 9999999999999999999997765 47888888776420 11 123345666664 67
Q ss_pred CCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHH
Q 007257 557 LRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYY 595 (611)
Q Consensus 557 l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~ 595 (611)
|+.|++|+.++++++. |+|++||++|++|+++.
T Consensus 525 l~~~~~P~~i~~v~~i------P~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 525 LGAHAAPREIEFKDKL------PKTRSGKIMRRVLKAWE 557 (570)
T ss_pred cccccCCcEEEEeCCC------CCCCchhhhHHHHHHHH
Confidence 9999999999998665 99999999999999875
No 28
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-65 Score=566.36 Aligned_cols=513 Identities=17% Similarity=0.159 Sum_probs=396.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++.+||++|+++. +..++..+.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 62 ~~~~~p~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~ 138 (629)
T PRK10524 62 HLAKRPEQLALIAV---STETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSV 138 (629)
T ss_pred hhccCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEe
Confidence 45678999999986 433445689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhH---------HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKV---------KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 152 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (611)
+++.++.+++.++|++++++++|+++... ..+.............++.++...... .........|.
T Consensus 139 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~~~~~~~~~~~ 214 (629)
T PRK10524 139 VFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM----ARVAGRDVDYA 214 (629)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----CcccCCcccHH
Confidence 99999999999999999999999976421 111111111112234455544221000 00011123455
Q ss_pred HHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhh-cccccccccCCCCCCcEEEEecchhhHHH
Q 007257 153 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG-VDLFLDQFEDKMTVDDVYLSFLPLAHILD 231 (611)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 231 (611)
++...............++++++++|||||||.||+|+++|.++...... ....+ ++..+|++++..|+.|..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~ 289 (629)
T PRK10524 215 TLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIF-----GGKAGETFFCASDIGWVVG 289 (629)
T ss_pred HHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCCEEEEcCCCCeecc
Confidence 55433222222223346789999999999999999999999987644433 22233 6788899999999999888
Q ss_pred HHH-HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 007257 232 RVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 305 (611)
Q Consensus 232 ~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (611)
... ++.++..|+++++++. ++..+++.++++++|+++++|++++.|.+....
T Consensus 290 ~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---------------------- 347 (629)
T PRK10524 290 HSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPA---------------------- 347 (629)
T ss_pred chHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcc----------------------
Confidence 755 5667899999998763 688999999999999999999999877542100
Q ss_pred HHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC---C
Q 007257 306 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD---E 382 (611)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~---~ 382 (611)
..... .+++||.+++||+++++++.+++.+.+++++++.||+||++......... .
T Consensus 348 -------------~~~~~--------~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~ 406 (629)
T PRK10524 348 -------------LLRKH--------DLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVEDR 406 (629)
T ss_pred -------------ccccc--------ChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcccC
Confidence 00011 12489999999999999999999999999999999999998543332221 1
Q ss_pred ccccCccCCCccCeeEEEeecC-CCCCCCCCCCCCcEEEEecC---CcccccCCChHhhhhhc----cCCccccCceEEE
Q 007257 383 MCMVGTAGPVSVYSELRLEEVP-EMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTRESI----IDGWFHTGDIGQI 454 (611)
Q Consensus 383 ~~~~~~~G~~~~~~~v~i~~~~-~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGD~~~~ 454 (611)
....+++|.|+++++++++| + ++ .+++.|+.|||+++|| +.+.+|+++++.+.+.+ .+|||+|||+|++
T Consensus 407 ~~~~~~~G~p~~g~~~~i~d-~~~g--~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~ 483 (629)
T PRK10524 407 PTRLGSPGVPMYGYNVKLLN-EVTG--EPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIR 483 (629)
T ss_pred cCCCCCcccCcCCceEEEEe-CCCC--CCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEE
Confidence 23457899999999999998 4 43 4567788999999998 57789999998877654 3589999999999
Q ss_pred ccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcH
Q 007257 455 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSF 531 (611)
Q Consensus 455 ~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~ 531 (611)
|+||++++.||.||+|++ +|++|+|.+||++|.+||+|.+|+|++.++. +.++++++++++...
T Consensus 484 d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~------------ 550 (629)
T PRK10524 484 DADGYYFILGRTDDVINV-AGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSL------------ 550 (629)
T ss_pred cCCCcEEEEEEecCeEEe-CCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCcc------------
Confidence 999999999999999997 8999999999999999999999999998766 478999998764210
Q ss_pred HHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 532 LELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 532 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
+..+..+.+.++|+++++ +.|+.+++|+.|++++.. |+|++||++|++|++.+.
T Consensus 551 ----~~~~~~~~~~~~i~~~~~-~~l~~~~~P~~i~~v~~l------P~T~sGKi~R~~L~~~~~ 604 (629)
T PRK10524 551 ----ADREARLALEKEIMALVD-SQLGAVARPARVWFVSAL------PKTRSGKLLRRAIQAIAE 604 (629)
T ss_pred ----ccccchHHHHHHHHHHHH-hhcCCCcCCCEEEEcCCC------CCCCCcchHHHHHHHHHc
Confidence 111223345566777775 789999999999998665 999999999999998764
No 29
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.1e-65 Score=564.93 Aligned_cols=503 Identities=20% Similarity=0.194 Sum_probs=390.7
Q ss_pred cCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 5 KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 5 ~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
.+||++|+++. + +.+..+++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++
T Consensus 96 ~~~~~~Al~~~---~-~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 96 RRDDRPAIIFR---G-EDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCCCeEEEEE---C-CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCC
Confidence 47999999987 3 3456689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhHH--------HHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHh
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKVK--------ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLH 156 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
.++.+++.++|+.++++++|+++.... ..........+....++.+...... ...........|.++..
T Consensus 172 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~ 248 (655)
T PRK03584 172 DFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPA---AAAAALPGALLWEDFLA 248 (655)
T ss_pred CCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCc---ccccccCCcccHHHHhh
Confidence 999999999999999999999875321 0111111122334445544422100 00001112345666654
Q ss_pred cccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHh-hhhcccccccccCCCCCCcEEEEecchhhHHHHHHH
Q 007257 157 LGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATF-VSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIE 235 (611)
Q Consensus 157 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 235 (611)
..........+..++++++|+|||||||.||||+++|.+++.. .......+ ++..+|++++..++.|..+. ..
T Consensus 249 ~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~-~~ 322 (655)
T PRK03584 249 PAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-----DLGPGDRFFWYTTCGWMMWN-WL 322 (655)
T ss_pred ccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-----CCCCCCEEEEcCCchHHhHH-HH
Confidence 2222222334557799999999999999999999999987543 44333334 67889999999999987543 35
Q ss_pred HHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhc
Q 007257 236 EYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMG 310 (611)
Q Consensus 236 ~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (611)
+.++..|+++++++. ++..+++.++++++|++.++|+++..+.+...
T Consensus 323 ~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---------------------------- 374 (655)
T PRK03584 323 VSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGL---------------------------- 374 (655)
T ss_pred HHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCC----------------------------
Confidence 678999999999753 78999999999999999999999987754100
Q ss_pred CCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc--CCceeeccccCCCCCceeeccCCCccccCc
Q 007257 311 YKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFLVQGYGLTETCGPTTVCFPDEMCMVGT 388 (611)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~ 388 (611)
.+ .... .+++||.+++||+++++++.+++.+.+ ++++.+.||+||+++.+....+......++
T Consensus 375 ------~~-~~~~--------~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~ 439 (655)
T PRK03584 375 ------VP-GETH--------DLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGE 439 (655)
T ss_pred ------Cc-cccC--------ChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCc
Confidence 00 0011 124899999999999999999999887 478999999999876544333333344588
Q ss_pred cCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecC--CcccccCCChHhhh--hhc---cCCccccCceEEEccCCeEE
Q 007257 389 AGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK--TLFSGYYKNPDLTR--ESI---IDGWFHTGDIGQILPNGVVK 461 (611)
Q Consensus 389 ~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~~---~~g~~~TGD~~~~~~dG~l~ 461 (611)
+|.|.+|++++++| +++.. + .++.|||+|+|| +++.||+++++.++ ..+ .+|||+|||+|++|+||+++
T Consensus 440 ~g~p~~g~~~~ivd-~~g~~--~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~ 515 (655)
T PRK03584 440 IQCRGLGMAVEAWD-EDGRP--V-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVV 515 (655)
T ss_pred cCCCcCCceeEEEC-CCCCC--C-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEE
Confidence 99999999999998 66543 3 578999999996 78999999987543 222 26899999999999999999
Q ss_pred EEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccH
Q 007257 462 IIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLV 538 (611)
Q Consensus 462 ~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (611)
+.||.||+|++ +|++|+|.|||++|.+||+|.+|+|++.++. +.++++|+++++.. ..
T Consensus 516 i~GR~dd~Ik~-~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~-----------------~~- 576 (655)
T PRK03584 516 IYGRSDATLNR-GGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVT-----------------LD- 576 (655)
T ss_pred EEeeccCeeec-CcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCC-----------------Cc-
Confidence 99999999996 9999999999999999999999999998764 48999999876420 11
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 539 QLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
+.+.++|+++++ ..|+.|++|..|+++++. |+|++||++|++|++.+.
T Consensus 577 ---~~~~~~l~~~~~-~~L~~~~~P~~i~~v~~l------P~t~sGKi~r~~lr~~~~ 624 (655)
T PRK03584 577 ---DALRARIRTTIR-TNLSPRHVPDKIIAVPDI------PRTLSGKKVELPVKKLLH 624 (655)
T ss_pred ---HHHHHHHHHHHH-hhCCCCcCCCEEEECCCC------CCCCCccchHHHHHHHHc
Confidence 223445666665 779999999999998765 999999999999998874
No 30
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=5.7e-65 Score=553.15 Aligned_cols=495 Identities=23% Similarity=0.269 Sum_probs=399.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.++++||++|+++. +...++++.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 33 ~a~~~p~~~A~~~~---~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vp 109 (547)
T PRK13295 33 CVASCPDKTAVTAV---RLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNP 109 (547)
T ss_pred HHHHCCCceEEEec---CCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEec
Confidence 46789999999986 434556689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhH----HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKV----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHL 157 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (611)
++|.++.+++.++++.++++++++++... ...........+....++.++... ..++.++...
T Consensus 110 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 176 (547)
T PRK13295 110 LMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDG-------------ADSFEALLIT 176 (547)
T ss_pred cccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCC-------------ccCHHHHhhC
Confidence 99999999999999999999999987531 111111111223445555554321 1123333221
Q ss_pred cc-------ccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHH
Q 007257 158 GK-------VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHIL 230 (611)
Q Consensus 158 ~~-------~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 230 (611)
.. ..........++++++++|||||||.||+|+++|.++...+......+ ++..++++++..|++|..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~ 251 (547)
T PRK13295 177 PAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-----GLGADDVILMASPMAHQT 251 (547)
T ss_pred CccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-----CCCCCCeEEEecCchhhh
Confidence 10 011112234678999999999999999999999999988887766555 678899999999999999
Q ss_pred HHHH-HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh
Q 007257 231 DRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN 308 (611)
Q Consensus 231 g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
++.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..+.......
T Consensus 252 g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~------------------------ 307 (547)
T PRK13295 252 GFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKES------------------------ 307 (547)
T ss_pred hHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccc------------------------
Confidence 8766 5667999999998876 8999999999999999999999998876532110
Q ss_pred hcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC-ccccC
Q 007257 309 MGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-MCMVG 387 (611)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~-~~~~~ 387 (611)
...+++||.+++||+++++++.+++.+.+++++++.||+||++.+.+.+.... .....
T Consensus 308 ---------------------~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~ 366 (547)
T PRK13295 308 ---------------------GRPVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERAST 366 (547)
T ss_pred ---------------------CCCcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhccC
Confidence 01125899999999999999999999989999999999999988766554322 22346
Q ss_pred ccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccC
Q 007257 388 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKK 467 (611)
Q Consensus 388 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~ 467 (611)
++|.|++++++++++ +++ .+++.|+.|||+|+|+.++.||+++++.+... .+|||+|||+|+++++|.+++.||.+
T Consensus 367 ~~G~~~~~~~v~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~ 442 (547)
T PRK13295 367 TDGCPLPGVEVRVVD-ADG--APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDADGYIRISGRSK 442 (547)
T ss_pred ccccccCCcEEEEEC-CCC--CCCCCCCCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcCCceEEEEeccC
Confidence 789999999999998 554 45667889999999999999999999888766 68899999999999999999999999
Q ss_pred CeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHH
Q 007257 468 NLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYI 544 (611)
Q Consensus 468 d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
|++++ +|++|+|.+||++|.++|+|.+++|++.++. +.++++|+++++.. . +
T Consensus 443 ~~i~~-~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--------~--------~-------- 497 (547)
T PRK13295 443 DVIIR-GGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQS--------L--------D-------- 497 (547)
T ss_pred CeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCC--------C--------C--------
Confidence 99996 9999999999999999999999999997654 47899998875320 0 1
Q ss_pred HHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 545 LSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 545 ~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.+++.+++.+..++.|++|+.++++++. |+|++||++|++|++++.+
T Consensus 498 ~~~l~~~~~~~~l~~~~~P~~i~~v~~l------P~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 498 FEEMVEFLKAQKVAKQYIPERLVVRDAL------PRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred HHHHHHHHHhccCccccCCcEEEEeccC------CCCCCccccHHHHHHHHhc
Confidence 1234444444579999999999999765 9999999999999887754
No 31
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=5.3e-65 Score=561.43 Aligned_cols=503 Identities=19% Similarity=0.173 Sum_probs=385.1
Q ss_pred cCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 5 KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 5 ~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
++++++|+++. + +++..+.+||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+++
T Consensus 96 ~~~~~~a~~~~---~-~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 96 AAGTEPALLYV---D-ETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSP 171 (652)
T ss_pred cCCCCeEEEEE---C-CCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCC
Confidence 46889999987 3 4455689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhH---------HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKV---------KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL 155 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (611)
.++.+++.++|++++|+++|+++... ..+.. .....+.++.++.+......... .........|+++.
T Consensus 172 ~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~ 248 (652)
T TIGR01217 172 DFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAE-VRKELPTLRAVVHIPYLGPRETE--APKIDGALDLEDFT 248 (652)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHH-HHhcCCCccEEEEEeCCCCcccc--cccccCcccHHHHH
Confidence 99999999999999999999987531 11111 11122444555554322100000 00001234566665
Q ss_pred hcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHH-hhhhcccccccccCCCCCCcEEEEecchhhHHHHHH
Q 007257 156 HLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIAT-FVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI 234 (611)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~ 234 (611)
..............++++++|+|||||||.||||+++|.+++. ........+ ++..+|++++..|+.|..+ .+
T Consensus 249 ~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~-~~ 322 (652)
T TIGR01217 249 AAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-----DLGPGDRLFYYTTTGWMMW-NW 322 (652)
T ss_pred hcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-----CCCCCcEEEEeCCcchhhh-HH
Confidence 4422222223345678999999999999999999999998654 333333333 6788999999999999754 33
Q ss_pred HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhh
Q 007257 235 EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 309 (611)
Q Consensus 235 ~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (611)
++.++..|+++++++. ++..+++.++++++|++..+|.++..+.....
T Consensus 323 ~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~--------------------------- 375 (652)
T TIGR01217 323 LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGV--------------------------- 375 (652)
T ss_pred HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCC---------------------------
Confidence 5578999999999853 67899999999999999887777655432100
Q ss_pred cCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC--CceeeccccCCCCCceeeccCCCccccC
Q 007257 310 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC--AFLVQGYGLTETCGPTTVCFPDEMCMVG 387 (611)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~--~~v~~~yG~tE~g~~~~~~~~~~~~~~~ 387 (611)
.+ ....+ +++||.+++||++++++..+++.+.++ ..+.+.||+||+++......+......+
T Consensus 376 -------~~-~~~~~--------l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g 439 (652)
T TIGR01217 376 -------HP-ARTHD--------LSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIG 439 (652)
T ss_pred -------Cc-cccCC--------hhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCC
Confidence 00 01111 249999999999999999999988875 4677899999975444332222233457
Q ss_pred ccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecC--CcccccCCChHhhh--hh-c--cCCccccCceEEEccCCeE
Q 007257 388 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK--TLFSGYYKNPDLTR--ES-I--IDGWFHTGDIGQILPNGVV 460 (611)
Q Consensus 388 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~--~~-~--~~g~~~TGD~~~~~~dG~l 460 (611)
++|.|.+|++++++| +++... .|+.|||+++|| +++.|||++++.++ +. | .+|||+|||+|++|+||++
T Consensus 440 ~~g~p~~g~~v~ivd-~~g~~~---~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l 515 (652)
T TIGR01217 440 EIQAPGLGTAVQSWD-PEGKPV---TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGI 515 (652)
T ss_pred ccCCCcCCCceEEEC-CCCCCC---CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcE
Confidence 889999999999998 665533 378999999996 68899999998654 22 3 2689999999999999999
Q ss_pred EEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhcc
Q 007257 461 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSL 537 (611)
Q Consensus 461 ~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (611)
++.||.||+|++ +|++|+|.|||++|.+||+|.||+|++.++. +.++|+|+++++.. ..
T Consensus 516 ~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~-----------------~~ 577 (652)
T TIGR01217 516 VIHGRSDSTLNP-QGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGAT-----------------LD 577 (652)
T ss_pred EEEecccCeEec-CCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCC-----------------CC
Confidence 999999999996 9999999999999999999999999998765 48999999876420 11
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 538 VQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
+.+.++|+++++ ..|+.|++|+.|++++.. |+|++||++|+.|++.+.
T Consensus 578 ----~~~~~~l~~~~~-~~l~~~~~P~~i~~v~~l------P~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 578 ----DALLDRIKRTIR-AGLSPRHVPDEIIEVPGI------PHTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred ----HHHHHHHHHHHH-hhCCCCcCCCEEEECCCC------CCCCCccChHHHHHHHHc
Confidence 223455666665 789999999999998765 999999999999998873
No 32
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=3.5e-64 Score=556.90 Aligned_cols=508 Identities=19% Similarity=0.161 Sum_probs=382.9
Q ss_pred ccCCCCCceeeeccccCC--CCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 4 QKYPGNRMLGWRPFVDGK--FGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 4 ~~~pd~~a~~~~~~~~~~--~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++||++|+++. +.. ++.++++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 186 ~~~pd~~Ai~~~---~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vp 262 (728)
T PLN03052 186 SKTDDSIAIIWR---DEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVS 262 (728)
T ss_pred ccCCCCeEEEEE---CCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEe
Confidence 468999999987 321 335689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHH-----hccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL-----LSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLH 156 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
++|.++.+++.+++++++|+++|+++.....- ......... ..++++....... ..........|+++..
T Consensus 263 i~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~--~~~iv~~~~~~~~---~~~~~~~~~~~~~~~~ 337 (728)
T PLN03052 263 IADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA--PKAIVLPADGKSV---RVKLREGDMSWDDFLA 337 (728)
T ss_pred eCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC--CcEEEEeCCCCcc---ccccccCCccHHHHHh
Confidence 99999999999999999999999987542100 000000001 1222222111000 0000012345777654
Q ss_pred ccccc----CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHH
Q 007257 157 LGKVN----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR 232 (611)
Q Consensus 157 ~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~ 232 (611)
..... ........++++++|+|||||||.||||+++|.+++.........+ ++..+|++++..|++|+++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-----~l~~~d~~~~~~~l~w~~g~ 412 (728)
T PLN03052 338 RANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-----DIRKGDIVCWPTNLGWMMGP 412 (728)
T ss_pred ccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-----CCCCCcEEEECCCcHHHhHH
Confidence 32111 1111223568999999999999999999999998876655444334 67889999999999999998
Q ss_pred HHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhc
Q 007257 233 VIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMG 310 (611)
Q Consensus 233 ~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (611)
...+.++..|++++++++ ++..+++.++++++|++.++|+++..|.+..
T Consensus 413 ~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~----------------------------- 463 (728)
T PLN03052 413 WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTN----------------------------- 463 (728)
T ss_pred HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcC-----------------------------
Confidence 767788999999999976 5578999999999999999999998875421
Q ss_pred CCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC-CceeeccccCCCCCceeeccCCCccccCcc
Q 007257 311 YKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDEMCMVGTA 389 (611)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~ 389 (611)
..+..++ ++||.++++|++++++...++.+.++ .++.+.||+||+++.+....+.....++++
T Consensus 464 --------~~~~~dl--------ssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~ 527 (728)
T PLN03052 464 --------CMAGLDW--------SSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAF 527 (728)
T ss_pred --------CcccCCh--------hheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCcc
Confidence 0011122 48999999999999999888887765 589999999999876554433333345889
Q ss_pred CCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCC--cccccCCChHhhhhhcc-----CC--ccccCceEEEccCCeE
Q 007257 390 GPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKT--LFSGYYKNPDLTRESII-----DG--WFHTGDIGQILPNGVV 460 (611)
Q Consensus 390 G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~--~~~gy~~~~~~~~~~~~-----~g--~~~TGD~~~~~~dG~l 460 (611)
|.|.+|++++++| ++++..+.+..+.|||+++++. ...+|+++. .....|. .| ||+|||++++|+||++
T Consensus 528 g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l 605 (728)
T PLN03052 528 STPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYY 605 (728)
T ss_pred ccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeE
Confidence 9999999999998 6665433322246999998653 334677654 2222231 23 8999999999999999
Q ss_pred EEEeccCCeEEcCCceecCcHHHHHHHh-cCcCcceEEEEecCCC----CeEEEEEecC--hHHHHHHHHHCCCCCcHHH
Q 007257 461 KIIDRKKNLIKISQGEYVALEYLENVYC-VAPIIEDIWVYGDSLK----SMLVAVVVPC--EEDTKKWAYSNGHAGSFLE 533 (611)
Q Consensus 461 ~~~GR~~d~i~~~~G~~v~~~~iE~~l~-~~p~V~~~~v~~~~~~----~~~~a~vv~~--~~~~~~~~~~~~~~~~~~~ 533 (611)
++.||.||+|++ +|++|+|.|||++|. .||+|.|++|++.++. +.++++|+++ ++..
T Consensus 606 ~i~GR~Dd~I~~-~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~--------------- 669 (728)
T PLN03052 606 RAHGRADDTMNL-GGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSN--------------- 669 (728)
T ss_pred EEEecCCCEEee-CCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCC---------------
Confidence 999999999997 999999999999994 8999999999997754 4799999987 3210
Q ss_pred HhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 534 LCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 534 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
++..++. +.+++.++ +.|+++..|+.|+++++. |+|.+||++|+.|++.+.+..
T Consensus 670 -~~~~~L~----~~i~~~i~-~~l~~~~~p~~i~~v~~l------P~T~sGKi~Rr~Lr~~~~~~~ 723 (728)
T PLN03052 670 -PDLNELK----KIFNSAIQ-KKLNPLFKVSAVVIVPSF------PRTASNKVMRRVLRQQLAQEL 723 (728)
T ss_pred -CCHHHHH----HHHHHHHH-hhcCCccCCCEEEEcCCC------CCCCchHHHHHHHHHHHHhhh
Confidence 0123334 44444443 678899999999988765 999999999999999887755
No 33
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.5e-64 Score=549.20 Aligned_cols=495 Identities=20% Similarity=0.203 Sum_probs=383.6
Q ss_pred ccccCCCCCceeeeccccCC----CCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCC
Q 007257 2 SVQKYPGNRMLGWRPFVDGK----FGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSL 77 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~----~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 77 (611)
.|+++||++|+++. ++. ...++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 15 ~a~~~p~~~a~~~~---~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~ 91 (552)
T PRK09274 15 AAQERPDQLAVAVP---GGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGA 91 (552)
T ss_pred HHHhCCCcceEEec---cCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCe
Confidence 46789999999876 321 12355899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCCCChhHHHHHHhhcCccEEEEcch--hHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH
Q 007257 78 ICVPLYDTLGPGAVNFILDHAEIDFVFVQDK--KVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL 155 (611)
Q Consensus 78 ~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (611)
+++|++|.++.+++.+++++++++++|+++. ....+.... ......++.++... ......+.++.
T Consensus 92 ~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~----------~~~~~~~~~~~ 158 (552)
T PRK09274 92 VPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWG---KPSVRRLVTVGGRL----------LWGGTTLATLL 158 (552)
T ss_pred EEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccC---ccchhheecccccc----------ccCCccHHHhc
Confidence 9999999999999999999999999998752 112111110 01222233322110 00112344443
Q ss_pred hcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHH
Q 007257 156 HLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIE 235 (611)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 235 (611)
..............++++++++|||||||.||+|.++|+++...+......+ ++..+++.++..|++|.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~pl~~~~~---- 229 (552)
T PRK09274 159 RDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-----GIEPGEIDLPTFPLFALFG---- 229 (552)
T ss_pred ccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-----CCCCCceeeeccCHHHhhh----
Confidence 2211112222345678999999999999999999999999998887766655 6788899999999987654
Q ss_pred HHHhhcCceEEEec--------CChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 007257 236 EYFFRRGASVGYYH--------GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 307 (611)
Q Consensus 236 ~~~l~~G~~~~~~~--------~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
+..|+++++.. .++..+++.++++++|+++++|+++..|.+......
T Consensus 230 ---~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~---------------------- 284 (552)
T PRK09274 230 ---PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANG---------------------- 284 (552)
T ss_pred ---hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcC----------------------
Confidence 34577777653 278999999999999999999999999876322110
Q ss_pred hhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc--CCceeeccccCCCCCceeeccCC----
Q 007257 308 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFLVQGYGLTETCGPTTVCFPD---- 381 (611)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v~~~yG~tE~g~~~~~~~~~---- 381 (611)
..++++|.+++||+++++++.+.+.+.+ |+++++.||+||++++++.....
T Consensus 285 -----------------------~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~ 341 (552)
T PRK09274 285 -----------------------IKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFA 341 (552)
T ss_pred -----------------------CCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhcc
Confidence 1225899999999999999999999998 57999999999999766543321
Q ss_pred -----CccccCccCCCccCeeEEEeecCCC-------CCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc---cCC--
Q 007257 382 -----EMCMVGTAGPVSVYSELRLEEVPEM-------GYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI---IDG-- 444 (611)
Q Consensus 382 -----~~~~~~~~G~~~~~~~v~i~~~~~~-------~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~g-- 444 (611)
......++|+|+++++++|+| +++ ...+++.|+.|||+|+|++++.||+++++.+...| .+|
T Consensus 342 ~~~~~~~~~~~~vG~~~~~~~~~ivd-~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~ 420 (552)
T PRK09274 342 TRAATDNGAGICVGRPVDGVEVRIIA-ISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDV 420 (552)
T ss_pred ccccccCCCCcccCccCCCceEEEEe-ccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCc
Confidence 011224789999999999998 322 23567788999999999999999999999998876 256
Q ss_pred ccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC--CeEEEEEecChHHHHHHH
Q 007257 445 WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK--SMLVAVVVPCEEDTKKWA 522 (611)
Q Consensus 445 ~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~--~~~~a~vv~~~~~~~~~~ 522 (611)
||+|||+|++|+||++++.||.||+|++ +|.+|+|.+||++|.+||+|.+|+|++.++. +.++++|++.++...
T Consensus 421 w~~TGDlg~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~~v~~~~~~~~--- 496 (552)
T PRK09274 421 WHRMGDLGYLDAQGRLWFCGRKAHRVET-AGGTLYTIPCERIFNTHPGVKRSALVGVGVPGAQRPVLCVELEPGVAC--- 496 (552)
T ss_pred EEEcCCEEEEccCCcEEEEeccCCeEEE-CCEEECcHHHHHHHHhCcccceeEEEEeCCCCCceEEEEEEccCcccc---
Confidence 9999999999999999999999999997 8999999999999999999999999987655 368888887764210
Q ss_pred HHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccc--cccccchHHHHHHHHHHH
Q 007257 523 YSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVT--ATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t--~~GKv~R~~l~~~~~~~~ 599 (611)
+..+ +.+.+++++. ..+.++.|+.+.++++. |+| ++||++|++|++++++.+
T Consensus 497 -------------~~~~----l~~~l~~~l~--~~~~~~~~~~~~~~~~l------P~t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 497 -------------SKSA----LYQELRALAA--AHPHTAGIERFLIHPSF------PVDIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred -------------chHH----HhhhhHHHHH--hcCCCcceeEEeccCCC------CccccccccccHHHHHHHHHHhh
Confidence 1122 3344444443 34566778888888654 999 799999999999987754
No 34
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-64 Score=548.71 Aligned_cols=498 Identities=19% Similarity=0.166 Sum_probs=383.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++|+++|+++. ++ .+.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 23 ~a~~~p~~~a~~~~---~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~ 95 (540)
T PRK05857 23 QARQQPEAIALRRC---DG----TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVM 95 (540)
T ss_pred HHhhCCCcEEEeec---CC----CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 57889999999865 33 157999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.++++++++++...... ........... ++..+..... . ..... ... ..
T Consensus 96 l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~--------~---~~~~~-~~~--~~ 159 (540)
T PRK05857 96 ADGNLPIAAIERFCQITDPAAALVAPGSKMAS-SAVPEALHSIP-VIAVDIAAVT--------R---ESEHS-LDA--AS 159 (540)
T ss_pred cCccCCHHHHHHHHHhcCCceEEEeccchhcc-ccccccccccc-eeEeeccccc--------c---ccccc-ccc--cc
Confidence 99999999999999999999999987653211 11111111111 2222211100 0 00000 000 00
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.++|.++.+........... ......+++.++.+|++|.+++...+.+++.
T Consensus 160 ~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~ 238 (540)
T PRK05857 160 LAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLN-WVTWVVGETTYSPLPATHIGGLWWILTCLMH 238 (540)
T ss_pred cccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcccc-ccccccCceeeecCCccccchHHHHHHHhhc
Confidence 111233467899999999999999999999999997665432211000 0134567899999999999998877888999
Q ss_pred CceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 242 GASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 242 G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
|+++++.+.++..+++.++++++|+++++|++++.+.......
T Consensus 239 G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~------------------------------------- 281 (540)
T PRK05857 239 GGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA------------------------------------- 281 (540)
T ss_pred ceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccC-------------------------------------
Confidence 9998776668999999999999999999999998886532110
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC----ccccCccCCCccCee
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE----MCMVGTAGPVSVYSE 397 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~----~~~~~~~G~~~~~~~ 397 (611)
...++++|.+++||++++....+++ +.+|+++++.||+||++.......... ....+++|.++++++
T Consensus 282 --------~~~~~~lr~~~~gG~~~~~~~~~~~-~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~ 352 (540)
T PRK05857 282 --------NATVPSLRLVGYGGSRAIAADVRFI-EATGVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVD 352 (540)
T ss_pred --------CCcCccceEEEEcCccCCchhHHHH-HHhCCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcE
Confidence 0112489999999999998877644 467999999999999986544332221 113478999999999
Q ss_pred EEEeecCCCCCCC----CCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcC
Q 007257 398 LRLEEVPEMGYSP----LDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKIS 473 (611)
Q Consensus 398 v~i~~~~~~~~~~----~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~ 473 (611)
+++++ +++.... .+.++.|||+|+|++++.||+++++.+.+.|.+|||+|||+|++|++|++++.||.+|+|++
T Consensus 353 v~i~d-~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~- 430 (540)
T PRK05857 353 VYLAA-TDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMIIC- 430 (540)
T ss_pred EEEEC-ccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcCCceEEEeccccccEec-
Confidence 99998 5443221 23467899999999999999999999999999999999999999999999999999999996
Q ss_pred CceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHH
Q 007257 474 QGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKN 550 (611)
Q Consensus 474 ~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (611)
+|.+|+|.+||++|..||+|.+|+|++.++. +.++++++++... +....+.+.+.+.+
T Consensus 431 ~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~-------------------~~~~~~~l~~~~~~ 491 (540)
T PRK05857 431 GGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAEL-------------------DESAARALKHTIAA 491 (540)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCC-------------------ChhhHHHHHHHHHH
Confidence 9999999999999999999999999998754 3566676665421 11112334555555
Q ss_pred HHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 551 AAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 551 ~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.++ +.++.|++|+.+.++++. |+|++||++|++|++.+++
T Consensus 492 ~~~-~~l~~~~~P~~v~~~~~i------P~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 492 RFR-RESEPMARPSTIVIVTDI------PRTQSGKVMRASLAAAATA 531 (540)
T ss_pred HHH-hhhccccCCeEEEEhhcC------CCCCCcceeHHHHHHhhhh
Confidence 554 679999999999999765 9999999999999988865
No 35
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.4e-64 Score=547.17 Aligned_cols=496 Identities=23% Similarity=0.280 Sum_probs=390.4
Q ss_pred ccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 4 QKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 4 ~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
+++|+++|+++. ++ + .++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 50 ~~~~~~~a~~~~---~~--~--~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 50 HNHNGDTALIDS---ST--G--FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cccCCCCEEEEC---CC--C--CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCc
Confidence 468999999875 21 1 379999999999999999999 899999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccC
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNE 162 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (611)
+|.++.+++.+++..+++++++++.+....+... ... ++.++...... ........|.++..... ..
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~ 189 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL------GVP-VIGVPENYDFD-----SKRIEFPKFYELIKEDF-DF 189 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc------CCc-EEecCcccccc-----cCccCcccHHHHhhcCC-cc
Confidence 9999999999999999999999998765554321 111 22221110000 00011234444443321 11
Q ss_pred CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHH-HHHhhc
Q 007257 163 MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIE-EYFFRR 241 (611)
Q Consensus 163 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~-~~~l~~ 241 (611)
.......++++++++|||||||.||+|.+||+++...+..+..............+++++.+|++|.+|+... +.++..
T Consensus 190 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~ 269 (560)
T PLN02574 190 VPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSL 269 (560)
T ss_pred cccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhc
Confidence 1223346789999999999999999999999999887765432211111122356888999999999998764 456788
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++.+. ++..+++.++++++|+++++|+++..|.+.....
T Consensus 270 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------------------------ 313 (560)
T PLN02574 270 GSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGV------------------------------------ 313 (560)
T ss_pred CCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcccc------------------------------------
Confidence 999988876 9999999999999999999999999886532110
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCC-CccccCccCCCccCeeE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD-EMCMVGTAGPVSVYSEL 398 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~-~~~~~~~~G~~~~~~~v 398 (611)
....++++|.+++||++++++..+.+.+.+ ++++++.||+||++.+.+..... .....+++|.+.+++++
T Consensus 314 --------~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v 385 (560)
T PLN02574 314 --------CGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQA 385 (560)
T ss_pred --------ccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEE
Confidence 001124899999999999999999998888 78999999999998765533222 22345789999999999
Q ss_pred EEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCcee
Q 007257 399 RLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEY 477 (611)
Q Consensus 399 ~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~ 477 (611)
+|+| ++++ .+++.|+.|||+|+|++++.||+++++.+.+.| .+|||+|||+|++++||++++.||.+|+|++ +|++
T Consensus 386 ~i~d-~~~g-~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~-~G~~ 462 (560)
T PLN02574 386 KVVD-WSTG-CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKY-KGFQ 462 (560)
T ss_pred EEEe-CCCC-cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEE-CCEE
Confidence 9998 4433 567788999999999999999999999999888 6899999999999999999999999999997 8999
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (611)
|++.+||++|.+||+|.|++|++.++. +.++++|+++++.. . + .++|.++++
T Consensus 463 v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~--------~--------~--------~~~l~~~~~- 517 (560)
T PLN02574 463 IAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGST--------L--------S--------QEAVINYVA- 517 (560)
T ss_pred ECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCC--------C--------C--------HHHHHHHHH-
Confidence 999999999999999999999997754 36888888765320 0 1 123444443
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+.|+.|+.|+.+.++++. |+|++||++|+.|++.+.+
T Consensus 518 ~~l~~~~~p~~v~~v~~i------P~t~~GKi~r~~L~~~~~~ 554 (560)
T PLN02574 518 KQVAPYKKVRKVVFVQSI------PKSPAGKILRRELKRSLTN 554 (560)
T ss_pred HhccCcccCcEEEEeecc------CCCCcchhhHHHHHHHHhh
Confidence 679999999999988765 9999999999999988755
No 36
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.4e-64 Score=543.09 Aligned_cols=481 Identities=20% Similarity=0.192 Sum_probs=386.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +++||.||.++++++|.+|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 52 ~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vp 122 (537)
T PRK13382 52 AAQRCPDRPGLIDE---L------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILL 122 (537)
T ss_pred HHHhCCCCeEEEeC---C------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEe
Confidence 57889999999975 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.++++++|++......+..... ..+....++..++.. ....++.+......
T Consensus 123 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~- 188 (537)
T PRK13382 123 LNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALA-DCPQATRIVAWTDED------------HDLTVEVLIAAHAG- 188 (537)
T ss_pred cCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHh-hccccceEEEecCCc------------ccccHHHHhhccCc-
Confidence 9999999999999999999999998776544322211 112222333332211 01233333322111
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
......+++.++++|||||||.||+|.++|.++..........+ .+..++++++..|++|.+++...+.++..
T Consensus 189 --~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 261 (537)
T PRK13382 189 --QRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-----PWRAEEPTVIVAPMFHAWGFSQLVLAASL 261 (537)
T ss_pred --CCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-----CCCCCCeEEEecChHhhhHHHHHHHHHhc
Confidence 11123467899999999999999999999988887766655544 56788999999999999998777888889
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++... ++..+++.++++++|++.++|+++..+.+..... .
T Consensus 262 g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-----------------------------------~ 306 (537)
T PRK13382 262 ACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEV-----------------------------------R 306 (537)
T ss_pred CcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchh-----------------------------------c
Confidence 999888766 8999999999999999999999999886521110 0
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
+. ..++++|.+++||+++++++.+.|.+.++.++++.||+||++.++..+.......++++|.|++++++++
T Consensus 307 ~~--------~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i 378 (537)
T PRK13382 307 NR--------YSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRI 378 (537)
T ss_pred cc--------CCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEE
Confidence 00 0113899999999999999999999999999999999999998766554332334578999999999999
Q ss_pred eecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCc
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVAL 480 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~ 480 (611)
+| +++ .+++.|+.|||+++|++++.||+ ++.+. .+.+|||+|||++++++||++++.||.||+|+. +|++|+|
T Consensus 379 ~d-~~~--~~~~~g~~GEl~v~g~~~~~gY~--~~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~-~G~~v~~ 451 (537)
T PRK13382 379 LD-QDF--REVPTGEVGTIFVRNDTQFDGYT--SGSTK-DFHDGFMASGDVGYLDENGRLFVVGRDDEMIVS-GGENVYP 451 (537)
T ss_pred EC-CCC--CCCCCCCeeEEEEEcCCcccCcc--ccchh-hccCCCEeeCceEEEeCCCcEEEeccccceeEE-CCEEECH
Confidence 98 554 45667889999999999999998 33333 456899999999999999999999999999996 9999999
Q ss_pred HHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCC
Q 007257 481 EYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKL 557 (611)
Q Consensus 481 ~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 557 (611)
.+||+.|.+||+|.+++|++.++. +.++++|++.++.. . . .+.++++++ ..|
T Consensus 452 ~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~--------~--------~--------~~~l~~~l~-~~l 506 (537)
T PRK13382 452 IEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGAS--------A--------T--------PETLKQHVR-DNL 506 (537)
T ss_pred HHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCC--------C--------C--------HHHHHHHHH-Hhc
Confidence 999999999999999999998755 36889998875420 0 1 123444554 679
Q ss_pred CCcceeeeEEEecCCCCCCCCccccccccchHHHHH
Q 007257 558 RGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLI 593 (611)
Q Consensus 558 ~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~ 593 (611)
+.|++|..++++++. |+|++||++|++|++
T Consensus 507 ~~~~~P~~i~~v~~l------P~t~~gK~~r~~L~~ 536 (537)
T PRK13382 507 ANYKVPRDIVVLDEL------PRGATGKILRRELQA 536 (537)
T ss_pred cCCCCCcEEEEeccC------CCCCCCCCcHHhhCC
Confidence 999999999998665 999999999999864
No 37
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.2e-63 Score=533.39 Aligned_cols=467 Identities=26% Similarity=0.328 Sum_probs=389.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|.++||++|+++. + +.+||.||+++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 11 ~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 11 RAFLTPDRTAIEFE---E------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred HHHhCCCceEEEeC---C------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 57889999999876 3 79999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..++++++++++++++.......... ...++++.......
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~ 131 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI------------------------------SVKFAELMNGPKEE 131 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc------------------------------cccHHHHhhccccc
Confidence 999999999999999999999999876543321100 01133332221111
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|++|.+++...+.++..
T Consensus 132 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~~~~~~~l~~ 206 (483)
T PRK03640 132 AEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-----GLTEDDCWLAAVPIFHISGLSILMRSVIY 206 (483)
T ss_pred CCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-----CCCcCcEEEEecCHHHHHHHHHHHHHHhc
Confidence 1222334678999999999999999999999999887766655544 78899999999999999998888888999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++.+. ++..+++.++++++|++.++|+++..+.+.....
T Consensus 207 G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~------------------------------------ 250 (483)
T PRK03640 207 GMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG------------------------------------ 250 (483)
T ss_pred CCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc------------------------------------
Confidence 999999887 9999999999999999999999999886422110
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC-CccccCccCCCccCeeEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD-EMCMVGTAGPVSVYSELR 399 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~-~~~~~~~~G~~~~~~~v~ 399 (611)
...+++|.+++||++++++..+.+.+. ++++++.||+||++......... ....++++|+|+++++++
T Consensus 251 ----------~~~~~lr~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~ 319 (483)
T PRK03640 251 ----------TYPSSFRCMLLGGGPAPKPLLEQCKEK-GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELK 319 (483)
T ss_pred ----------ccCCcceEEEEcCCCCCHHHHHHHHHh-CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEE
Confidence 011489999999999999999988875 99999999999998654443332 344558999999999999
Q ss_pred EeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecC
Q 007257 400 LEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVA 479 (611)
Q Consensus 400 i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~ 479 (611)
+.+ ++ .+++.++.|||+++|++++.||+++++.+...|.+|||+|||++++++||.+++.||.+|++++ +|.+|+
T Consensus 320 i~~-~~---~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~-~G~~v~ 394 (483)
T PRK03640 320 IEK-DG---VVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDEEGFLYVLDRRSDLIIS-GGENIY 394 (483)
T ss_pred Eec-CC---CcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcCCCCEEEeecccCeEEe-CCEEEC
Confidence 987 32 4667788999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred cHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCC
Q 007257 480 LEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNK 556 (611)
Q Consensus 480 ~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (611)
+.+||+.+.++|+|.++++++.+++ ..+++++++.... +. +.++++++ +.
T Consensus 395 ~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~------------------~~--------~~l~~~~~-~~ 447 (483)
T PRK03640 395 PAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGEV------------------TE--------EELRHFCE-EK 447 (483)
T ss_pred HHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCCC------------------CH--------HHHHHHHH-Hh
Confidence 9999999999999999999987654 3577777755422 11 23344443 67
Q ss_pred CCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 557 LRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 557 l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
|+.+++|..|+++++. |+|++||++|++|++++++
T Consensus 448 l~~~~~p~~i~~~~~i------P~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 448 LAKYKVPKRFYFVEEL------PRNASGKLLRHELKQLVEE 482 (483)
T ss_pred ccCCCCCcEEEEeCCC------CCCCccceeHHHHHHHHhh
Confidence 9999999999998765 9999999999999999864
No 38
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-63 Score=541.92 Aligned_cols=502 Identities=21% Similarity=0.263 Sum_probs=389.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
.|+++|+++|+++. + +.+||+||.+++.++|++|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 33 ~a~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 33 SCQRFADKPAFSNL----G-----KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred HHHhCCCCeeEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 46779999999875 3 689999999999999999997 5999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCc--HHHHHHhh-------------hCC
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLT--AEQKEMAV-------------QTG 145 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~-------------~~~ 145 (611)
|++|.++.+++.+++++++++++|+++.....+..... . ...+.++..+... ........ ...
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLP-K-TGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHL 181 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhh-c-cCcceeEEecccccccchhhhhcccchhhccccccccCC
Confidence 99999999999999999999999998765443322111 1 1222333221100 00000000 000
Q ss_pred CceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCC-CCcEEEEec
Q 007257 146 IKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT-VDDVYLSFL 224 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 224 (611)
.....+.+.+..............++++++++|||||||.||+|+++|.++..........+ ...+. ..+++++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~ 258 (562)
T PRK05677 182 PQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALM---GSNLNEGCEILIAPL 258 (562)
T ss_pred cccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHh---ccCCCCCccEEEEcC
Confidence 11233444443332222223345679999999999999999999999999987665443322 11223 346889999
Q ss_pred chhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 007257 225 PLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYK 301 (611)
Q Consensus 225 p~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 301 (611)
|++|.+++.. ++..+..|++.++.+. ++..+++.++++++|+++++|+++..+......
T Consensus 259 pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------ 320 (562)
T PRK05677 259 PLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAF------------------ 320 (562)
T ss_pred cHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCccc------------------
Confidence 9999999875 4456777887776653 889999999999999999999999877642100
Q ss_pred HHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC
Q 007257 302 YKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD 381 (611)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~ 381 (611)
.. ..++++|.+++||+++++++.+.|.+.+|+++++.||+||++.+.......
T Consensus 321 -------------------~~--------~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~ 373 (562)
T PRK05677 321 -------------------RK--------LDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ 373 (562)
T ss_pred -------------------cc--------CChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCcc
Confidence 00 011389999999999999999999998899999999999998877655443
Q ss_pred CccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeE
Q 007257 382 EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVV 460 (611)
Q Consensus 382 ~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l 460 (611)
. ..++++|.|++++++++++ +++ .+++.|+.|||+++|+.++.||+++++.+.+.| .+|||+|||+|+++++|.+
T Consensus 374 ~-~~~~~vG~~~~~~~v~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l 449 (562)
T PRK05677 374 A-IQVGTIGIPVPSTLCKVID-DDG--NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYM 449 (562)
T ss_pred C-CCCCccCccCCCCEEEEEC-CCC--CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcE
Confidence 2 2347899999999999998 554 456778899999999999999999999999998 5899999999999999999
Q ss_pred EEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhcc
Q 007257 461 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSL 537 (611)
Q Consensus 461 ~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (611)
++.||.+|+|++ +|.+|+|.+||+.|++||+|.+++|++.++. +.+++++++.++.. . +.
T Consensus 450 ~i~GR~~d~i~~-~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~--------~--------~~ 512 (562)
T PRK05677 450 RIVDRKKDMILV-SGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGET--------L--------TK 512 (562)
T ss_pred EEEecCcCeEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCC--------C--------CH
Confidence 999999999997 8999999999999999999999999997754 37788887654310 0 11
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 538 VQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
+.+.++++ ..|+.|++|..+++++.. |+|++||++|++|++++..+
T Consensus 513 --------~~l~~~~~-~~l~~~~~P~~i~~v~~i------P~t~sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 513 --------EQVMEHMR-ANLTGYKVPKAVEFRDEL------PTTNVGKILRRELRDEELKK 558 (562)
T ss_pred --------HHHHHHHH-HhhhhccCCcEEEEeccC------CCCCcccccHHHHHHHHHHh
Confidence 23344443 678999999999999765 99999999999999876543
No 39
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-63 Score=536.14 Aligned_cols=478 Identities=22% Similarity=0.268 Sum_probs=390.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
.|+++||++|+++. + +.+||.||.++++++|++|.+ .|+++|++|+++++|++++++++|||+++|++++
T Consensus 11 ~a~~~p~~~a~~~~----~-----~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~ 81 (496)
T PRK06839 11 RAYLHPDRIAIITE----E-----EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAV 81 (496)
T ss_pred HHHHCCCCeEEEEC----C-----ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEE
Confidence 57889999999975 3 799999999999999999986 6999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|+++.++.+++..+++.++++++++++........... . .....++.+.+ +.++...
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~------------------~~~~~~~--- 138 (496)
T PRK06839 82 PLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQK-V-SYVQRVISITS------------------LKEIEDR--- 138 (496)
T ss_pred ecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhh-c-cCcceEEEecc------------------hHhhhcc---
Confidence 99999999999999999999999998776544322111 1 11122222221 1111111
Q ss_pred cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHh
Q 007257 161 NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFF 239 (611)
Q Consensus 161 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l 239 (611)
......+..++++++++|||||||.||+|.++|.++..........+ .+..++++++.+|++|.+|+.. .+.++
T Consensus 139 ~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~~~~~~~~l 213 (496)
T PRK06839 139 KIDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-----DLTMHDRSIVLLPLFHIGGIGLFAFPTL 213 (496)
T ss_pred CCCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-----CCCCCCeEEEeeCCcchhhHHHHHHHHH
Confidence 11122345678999999999999999999999999876655444433 6778999999999999999876 45578
Q ss_pred hcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 007257 240 RRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASP 318 (611)
Q Consensus 240 ~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (611)
..|+++++.+. ++..+++.++++++|++.++|.+++.+.......
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---------------------------------- 259 (496)
T PRK06839 214 FAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFE---------------------------------- 259 (496)
T ss_pred hcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccc----------------------------------
Confidence 89999888766 9999999999999999999999999886532110
Q ss_pred HHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC-CccccCccCCCccCee
Q 007257 319 LADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD-EMCMVGTAGPVSVYSE 397 (611)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~-~~~~~~~~G~~~~~~~ 397 (611)
...++++|.+++||+++++++.+.+.+. |+++.+.||+||++...+..... .....+++|.|+++++
T Consensus 260 -----------~~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 327 (496)
T PRK06839 260 -----------TTNLQSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCD 327 (496)
T ss_pred -----------cCCCcccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCce
Confidence 0112489999999999999999999886 99999999999999765544332 2334578999999999
Q ss_pred EEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCcee
Q 007257 398 LRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEY 477 (611)
Q Consensus 398 v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~ 477 (611)
+++++ +++.. ++.|+.|||+|+|+.++.||+++++.+...+.+|||+|||+++++++|.+++.||.+|+|+. +|.+
T Consensus 328 ~~i~d-~~~~~--~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G~~ 403 (496)
T PRK06839 328 YELID-ENKNK--VEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKEMIIS-GGEN 403 (496)
T ss_pred EEEEC-CCcCC--CCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcCCCcEEEeccccceEEE-CCEE
Confidence 99998 55553 67788999999999999999999999998889999999999999999999999999999996 9999
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCCC---eEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLKS---MLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (611)
|+|.+||+.|.++|+|.+++|++.++.. .++++|+++++.. . .. ++|+++++
T Consensus 404 v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--------~--------~~--------~~l~~~~~- 458 (496)
T PRK06839 404 IYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSV--------L--------IE--------KDVIEHCR- 458 (496)
T ss_pred ECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCC--------C--------CH--------HHHHHHHH-
Confidence 9999999999999999999999977553 7889999876420 0 11 23444443
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
..|+.+++|..++++++. |+|++||++|++|+++.++
T Consensus 459 ~~l~~~~~P~~~~~v~~~------P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 459 LFLAKYKIPKEIVFLKEL------PKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred hhCcCCCCCcEEEEeccC------CCCccccccHHHHHHHhhc
Confidence 679999999999998765 9999999999999987653
No 40
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=3.8e-63 Score=537.84 Aligned_cols=493 Identities=26% Similarity=0.319 Sum_probs=394.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++||++|+++. ++ + +++||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 32 ~~~~~~~~~a~~~~---~~--~--~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~ 104 (537)
T PLN02246 32 RLSEFSDRPCLIDG---AT--G--RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTT 104 (537)
T ss_pred HHHhCCCCeEEEec---CC--C--ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEec
Confidence 46789999999865 21 1 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++..+++.++++++++++.....+..... ... ..++.+++.. .....+.++.... ..
T Consensus 105 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~--~~~-~~~i~~~~~~-----------~~~~~~~~~~~~~-~~ 169 (537)
T PLN02246 105 ANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAE--DDG-VTVVTIDDPP-----------EGCLHFSELTQAD-EN 169 (537)
T ss_pred CCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhh--cCC-ceEEEeCCCC-----------CCceeHHHHhcCC-CC
Confidence 9999999999999999999999998876654422211 011 2344443321 1123344443221 11
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
........++++++++|||||||.||+|.++|+++...+........ ...++..+|++++.+|++|.+++.. ++.++.
T Consensus 170 ~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~-~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~ 248 (537)
T PLN02246 170 ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN-PNLYFHSDDVILCVLPMFHIYSLNSVLLCGLR 248 (537)
T ss_pred CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccc-cccCCCCCcEEEEeechHHHHHHHHHHHHHHh
Confidence 12223456889999999999999999999999999877665432110 0125788999999999999999866 556789
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.++++++|++.++|.++..|.+.....
T Consensus 249 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~----------------------------------- 293 (537)
T PLN02246 249 VGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVE----------------------------------- 293 (537)
T ss_pred cCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCcccc-----------------------------------
Confidence 9999999987 8999999999999999999999988875421100
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCC----CccccCccCCCcc
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD----EMCMVGTAGPVSV 394 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~----~~~~~~~~G~~~~ 394 (611)
...++++|.+++||+++++++.+.+.+.+ +..+++.||+||++.+++.+... ....++++|+|++
T Consensus 294 ----------~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 363 (537)
T PLN02246 294 ----------KYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVR 363 (537)
T ss_pred ----------ccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccC
Confidence 01124899999999999999999999988 68899999999998765543211 1223478999999
Q ss_pred CeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcC
Q 007257 395 YSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKIS 473 (611)
Q Consensus 395 ~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~ 473 (611)
++++++++ +++ ..+++.|+.|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|++
T Consensus 364 ~~~~~i~d-~~~-~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~- 440 (537)
T PLN02246 364 NAELKIVD-PET-GASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKY- 440 (537)
T ss_pred CcEEEEec-CCC-CCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEE-
Confidence 99999998 433 3566788899999999999999999999999888 6899999999999999999999999999997
Q ss_pred CceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHH
Q 007257 474 QGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKN 550 (611)
Q Consensus 474 ~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (611)
+|++|+|.+||+.|.+||+|.+++|++.++. +.+++++++.++.. . + .++|.+
T Consensus 441 ~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~--------~--------~~~l~~ 496 (537)
T PLN02246 441 KGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSE--------I--------T--------EDEIKQ 496 (537)
T ss_pred CCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCC--------C--------C--------HHHHHH
Confidence 8999999999999999999999999997655 36788888765320 0 1 123444
Q ss_pred HHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 551 AAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 551 ~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
+++ ..|+.|+.|+.+.++++. |+|++||++|++|+++++
T Consensus 497 ~l~-~~l~~~~~p~~i~~~~~~------P~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 497 FVA-KQVVFYKRIHKVFFVDSI------PKAPSGKILRKDLRAKLA 535 (537)
T ss_pred HHH-hhCcCccccceEEEeccC------CCCCcchhhHHHHHHHHh
Confidence 443 679999999999998665 999999999999998875
No 41
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-63 Score=532.63 Aligned_cols=467 Identities=19% Similarity=0.207 Sum_probs=384.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +++||.||.+++.++|.+|.+.|. +|++|+++++|++++++++|||+++|++++|
T Consensus 10 ~a~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 10 HASLQPNKIAIKEN---D------RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred HHHhCCCCeEEecC---C------cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 57889999999876 3 599999999999999999999985 8999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.+++++++++......+... ...++..+. +.+..... ..
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~~~------------------~~~~~~~~-~~ 133 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPDE-------EGRVIEIDE------------------WKRMIEKY-LP 133 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhhc-------cceEEEehh------------------hhhhhhhc-cc
Confidence 99999999999999999999999987654333110 011222211 11111111 11
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
.........+++++++|||||||.||+|+++|.++...+......+ ++..+|+++...|++|..++...+.++..
T Consensus 134 ~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~l~~~~~l~~~~~~l~~ 208 (487)
T PRK07638 134 TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-----HMKREDSVLIAGTLVHSLFLYGAISTLYV 208 (487)
T ss_pred cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CcCCCCEEEEeecchHHHHHHHHHHHHcc
Confidence 1111122356789999999999999999999999988877766555 67889999999999998887777788999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++.+. ++..+++.++++++|+++++|+++..+.+...
T Consensus 209 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-------------------------------------- 250 (487)
T PRK07638 209 GQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR-------------------------------------- 250 (487)
T ss_pred CcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC--------------------------------------
Confidence 999998876 89999999999999999999999988865200
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR 399 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~ 399 (611)
...+.+.++++|++++++..+++.+.+ +..+++.||+||++.++...........+++|.|+++++++
T Consensus 251 -----------~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 319 (487)
T PRK07638 251 -----------VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVR 319 (487)
T ss_pred -----------cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEE
Confidence 012556678899999999999999988 78899999999999877665543344557899999999999
Q ss_pred EeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecC
Q 007257 400 LEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVA 479 (611)
Q Consensus 400 i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~ 479 (611)
|++ +++ .+++.|+.|||+++|+.++.||+++++.+.+.+.+|||+|||+|++|++|++++.||.+|+|++ +|.+|+
T Consensus 320 i~d-~~g--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~-~G~~v~ 395 (487)
T PRK07638 320 ICN-EAG--EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMILF-GGINIF 395 (487)
T ss_pred EEC-CCC--CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeEEe-CCEEEC
Confidence 998 554 4567788999999999999999999998887778999999999999999999999999999997 999999
Q ss_pred cHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCC
Q 007257 480 LEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNK 556 (611)
Q Consensus 480 ~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (611)
|.+||++|.++|+|.+|+|++.++. +.++++++... .. ++++++++ +.
T Consensus 396 ~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~--------------------~~--------~~l~~~~~-~~ 446 (487)
T PRK07638 396 PEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKGSA--------------------TK--------QQLKSFCL-QR 446 (487)
T ss_pred HHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEECCC--------------------CH--------HHHHHHHH-HH
Confidence 9999999999999999999998765 46777776421 11 23334443 57
Q ss_pred CCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 557 LRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 557 l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
++.|++|+.++++++. |+|++||++|++|++++++
T Consensus 447 l~~~~~p~~i~~v~~i------P~t~~GKv~r~~L~~~~~~ 481 (487)
T PRK07638 447 LSSFKIPKEWHFVDEI------PYTNSGKIARMEAKSWIEN 481 (487)
T ss_pred hhcccCCcEEEEeccc------CCCCcccccHHHHHHHHhc
Confidence 8899999999998765 9999999999999988755
No 42
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-63 Score=540.14 Aligned_cols=500 Identities=25% Similarity=0.292 Sum_probs=400.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+|+++||++|+++. + +++||.||.+++.++|.+|.+. |+++|++|+++++|++++++++|||+++|++++
T Consensus 19 ~a~~~~~~~a~~~~---~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 89 (546)
T PRK08314 19 SARRYPDKTAIVFY---G------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVV 89 (546)
T ss_pred HHHHcCCCcceeec---C------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEe
Confidence 56789999999986 3 6899999999999999999999 999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHH--H------------HhhhCCC
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQK--E------------MAVQTGI 146 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~------------~~~~~~~ 146 (611)
|++|.++.+++.++++.++++++++++.....+....... ..+.++.......... . .......
T Consensus 90 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (546)
T PRK08314 90 PVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--RLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPG 167 (546)
T ss_pred ecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--CcceEEEecchhhcccccccCccccccccccccccccc
Confidence 9999999999999999999999999987665543322111 2223332211000000 0 0000011
Q ss_pred ceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecch
Q 007257 147 KPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPL 226 (611)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 226 (611)
....|++...... ........++++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|+
T Consensus 168 ~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~ 240 (546)
T PRK08314 168 GVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-----NSTPESVVLAVLPL 240 (546)
T ss_pred ccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCCCceEEEEcCc
Confidence 2345555543321 2223445788999999999999999999999999998887766655 67889999999999
Q ss_pred hhHHHHHH-HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 007257 227 AHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 304 (611)
Q Consensus 227 ~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
+|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..+.....
T Consensus 241 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~---------------------- 298 (546)
T PRK08314 241 FHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPG---------------------- 298 (546)
T ss_pred hHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCC----------------------
Confidence 99999865 5567999999999887 89999999999999999999999887754100
Q ss_pred HHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCcc
Q 007257 305 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMC 384 (611)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~ 384 (611)
.... .+++++.+++||+++++++.+++.+.++.++++.||+||++...........
T Consensus 299 ---------------~~~~--------~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~- 354 (546)
T PRK08314 299 ---------------LAER--------DLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRP- 354 (546)
T ss_pred ---------------cccc--------CchhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecCCCcCC-
Confidence 0111 1137999999999999999999999889999999999999987665544322
Q ss_pred ccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc--C--CccccCceEEEccCCeE
Q 007257 385 MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--D--GWFHTGDIGQILPNGVV 460 (611)
Q Consensus 385 ~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~--g~~~TGD~~~~~~dG~l 460 (611)
..+++|.|+++++++++| ++. ..+++.++.|||+|+|++++.||+++++.+.+.|. + +||+|||+|+++++|.+
T Consensus 355 ~~~~~G~~~~g~~~~i~d-~~~-~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l 432 (546)
T PRK08314 355 KLQCLGIPTFGVDARVID-PET-LEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYF 432 (546)
T ss_pred CCCccCcccCCeEEEEEe-CCC-CcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcE
Confidence 347899999999999998 433 25566778999999999999999999999988873 3 59999999999999999
Q ss_pred EEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhcc
Q 007257 461 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSL 537 (611)
Q Consensus 461 ~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (611)
++.||.||+|++ +|.+|+|.+||++|.++|+|.+++|++.++. +.++++++++++... .
T Consensus 433 ~~~GR~~d~i~~-~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~----------------~- 494 (546)
T PRK08314 433 FITDRLKRMINA-SGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARG----------------K- 494 (546)
T ss_pred EEEecchhhEEe-CCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCC----------------C-
Confidence 999999999997 8999999999999999999999999997755 478999998764210 0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 538 VQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+ ..+.++++++ +.|+.+++|+.+.++++. |+|++||++|++|++..+.
T Consensus 495 --~---~~~~l~~~~~-~~l~~~~~P~~~~~v~~i------P~t~~GKv~r~~L~~~~~~ 542 (546)
T PRK08314 495 --T---TEEEIIAWAR-EHMAAYKYPRIVEFVDSL------PKSGSGKILWRQLQEQEKA 542 (546)
T ss_pred --C---CHHHHHHHHH-HhcccCCCCcEEEEecCC------CCCCccceeHHHHHHHHhh
Confidence 0 0134555554 789999999999999765 9999999999999876543
No 43
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-63 Score=542.87 Aligned_cols=506 Identities=25% Similarity=0.328 Sum_probs=401.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++||++|+++. + +.+||.||+++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 41 ~~~~~p~~~a~~~~----~-----~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~ 111 (573)
T PRK05605 41 AVARFGDRPALDFF----G-----ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVE 111 (573)
T ss_pred HHHHCCCCeEEEeC----C-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEee
Confidence 46789999999875 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHH--HHH---------------hhhC
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQ--KEM---------------AVQT 144 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~---------------~~~~ 144 (611)
++|.++.+++.+++.+++++++|+++............ .....++..+...... ... ....
T Consensus 112 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (573)
T PRK05605 112 HNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRT--TPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTGP 189 (573)
T ss_pred cCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhc--cccceeEeeecccccccccccccccccccccccccccccC
Confidence 99999999999999999999999988765443221111 1122233322110000 000 0001
Q ss_pred CCceeeHHHHHhccccc---CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEE
Q 007257 145 GIKPYSWDEFLHLGKVN---EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYL 221 (611)
Q Consensus 145 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 221 (611)
......|.++....... ........++++++++|||||||.||+|.+||.++...+......+.. ....+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~---~~~~~~~~~ 266 (573)
T PRK05605 190 APGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPG---LGDGPERVL 266 (573)
T ss_pred CCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccc---cCCCCcEEE
Confidence 11334566665432111 012233567899999999999999999999999998776544332210 123478999
Q ss_pred EecchhhHHHHHH-HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 007257 222 SFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDAL 299 (611)
Q Consensus 222 ~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 299 (611)
+..|++|.+|+.. ...++..|+++++.+. ++..+++.++++++|++.++|.+++.+.+......
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-------------- 332 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERG-------------- 332 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccC--------------
Confidence 9999999999876 4556888999988876 99999999999999999999999998875322110
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeecc
Q 007257 300 YKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCF 379 (611)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~ 379 (611)
..++++|.+++||+++++++.+.+.+.++.++++.||+||+++++....
T Consensus 333 -------------------------------~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~ 381 (573)
T PRK05605 333 -------------------------------VDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNP 381 (573)
T ss_pred -------------------------------CCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCC
Confidence 0113899999999999999999999888999999999999998777665
Q ss_pred CCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCe
Q 007257 380 PDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGV 459 (611)
Q Consensus 380 ~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~ 459 (611)
......++++|.++++..++++| +++...+++.++.|||+++|+.++.||+++++.+.+.|.+|||+|||+|+++++|+
T Consensus 382 ~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~ 460 (573)
T PRK05605 382 MSDDRRPGYVGVPFPDTEVRIVD-PEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGF 460 (573)
T ss_pred cccCCcCCccccCCCCCEEEEEc-CCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCc
Confidence 44444457899999999999998 55534667788899999999999999999999999999889999999999999999
Q ss_pred EEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhc
Q 007257 460 VKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCS 536 (611)
Q Consensus 460 l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~ 536 (611)
+++.||.||++++ +|++|+|.+||++|..|+.|.+++|++.++. +.+++++++.++.. . +
T Consensus 461 l~i~gR~dd~i~~-~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~--------~--------~ 523 (573)
T PRK05605 461 IRIVDRIKELIIT-GGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAA--------L--------D 523 (573)
T ss_pred EEEEeccccceee-CCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCC--------C--------C
Confidence 9999999999996 9999999999999999999999999987644 57888888876420 0 1
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 537 LVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
.+.|+++++ +.|+.+++|..+++++.. |+|.+||++|++|++++.+++
T Consensus 524 --------~~~l~~~~~-~~l~~~~~p~~i~~~~~i------P~t~~GKi~r~~L~~~~~~~~ 571 (573)
T PRK05605 524 --------PEGLRAYCR-EHLTRYKVPRRFYHVDEL------PRDQLGKVRRREVREELLEKL 571 (573)
T ss_pred --------HHHHHHHHH-HhCccccCCcEEEEeccC------CCCCcccccHHHHHHHHHHHh
Confidence 134444553 678999999999988654 999999999999999987765
No 44
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3e-63 Score=541.71 Aligned_cols=515 Identities=21% Similarity=0.252 Sum_probs=383.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. + .++||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++|++++|
T Consensus 23 ~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vp 93 (579)
T PLN03102 23 ASECYPNRTSIIYG---K------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNP 93 (579)
T ss_pred HHHhCCCCeEEEEC---C------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEee
Confidence 46789999999876 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhcccccc----ccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRS----AQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHL 157 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (611)
+++.++.+++.++|+.++++++|++++....+....... ......++.++...... .......++.++...
T Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 168 (579)
T PLN03102 94 INTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK-----RPSSEELDYECLIQR 168 (579)
T ss_pred ccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccccc-----CCcccccCHHHHHhc
Confidence 999999999999999999999999877654433221110 00112234443221100 000112345555443
Q ss_pred ccccCCc----CCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHH
Q 007257 158 GKVNEME----ILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRV 233 (611)
Q Consensus 158 ~~~~~~~----~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~ 233 (611)
....... .....++++++++|||||||.||+|+++|.++........... .+...+++++.+|++|..++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~g~~ 243 (579)
T PLN03102 169 GEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW-----EMGTCPVYLWTLPMFHCNGWT 243 (579)
T ss_pred cCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-----CCCCCCeEEecCChhhhcchh
Confidence 3221111 1234578999999999999999999999999754433322222 456678899999999999887
Q ss_pred HHHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCC
Q 007257 234 IEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYK 312 (611)
Q Consensus 234 ~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (611)
..+.++..|+++++.+. ++..+++.|+++++|+++++|+++..|.+......
T Consensus 244 ~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------------- 296 (579)
T PLN03102 244 FTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDL--------------------------- 296 (579)
T ss_pred HHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCccccc---------------------------
Confidence 77777888888888765 88899999999999999999999998865311100
Q ss_pred CCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC----------
Q 007257 313 QREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE---------- 382 (611)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~---------- 382 (611)
...++++.+++||+++++.+.+++.+ +|.++++.||+||+++....+....
T Consensus 297 ------------------~~~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~ 357 (579)
T PLN03102 297 ------------------SPRSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQ 357 (579)
T ss_pred ------------------CCcccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccccccccccccCCcccc
Confidence 00136788999999999999999876 5999999999999987544321110
Q ss_pred ---ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCe
Q 007257 383 ---MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGV 459 (611)
Q Consensus 383 ---~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~ 459 (611)
....+..+.+.++ +++.+.+.+...+.+.++.|||+|+|++++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 358 ~~~~~~~g~~~~~~~~--v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~ 435 (579)
T PLN03102 358 MELKARQGVSILGLAD--VDVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGH 435 (579)
T ss_pred cccccCCCcccccccc--eEEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcCCCe
Confidence 0011223333343 44555222222333334679999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhc
Q 007257 460 VKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCS 536 (611)
Q Consensus 460 l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~ 536 (611)
+++.||.+|+|+. +|++|+|.+||+.|.+||.|.+++|++.+++ +.++|+|++.++.... ...+.+
T Consensus 436 l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~-------~~~~~~--- 504 (579)
T PLN03102 436 VEIKDRSKDIIIS-GGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTK-------EDRVDK--- 504 (579)
T ss_pred EEEEeccCcEEEE-CCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCccccc-------cccccc---
Confidence 9999999999996 9999999999999999999999999998765 4889999887643110 000000
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH-HHHHHHhh
Q 007257 537 LVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV-EIDQLYEK 605 (611)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~-~~~~~y~~ 605 (611)
... -..++.++++ ..|+.|++|..+.++++. |+|++||++|++|++++.+ ..++-|+.
T Consensus 505 ---~~~-~~~~l~~~~~-~~L~~~~~P~~i~~~~~~------P~t~~gKi~r~~L~~~~~~~~~~~~~~~ 563 (579)
T PLN03102 505 ---LVT-RERDLIEYCR-ENLPHFMCPRKVVFLQEL------PKNGNGKILKPKLRDIAKGLVVEDEDNV 563 (579)
T ss_pred ---ccc-cHHHHHHHHH-hhcccccCCeEEEEcccC------CCCCcccccHHHHHHHHHHhhhHHHHHH
Confidence 000 0234555554 679999999999998665 9999999999999999866 45555553
No 45
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-63 Score=538.54 Aligned_cols=494 Identities=23% Similarity=0.299 Sum_probs=384.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. ++ .+.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 25 ~a~~~p~~~ai~~~---~~----~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 97 (534)
T PRK05852 25 AATRLPEAPALVVT---AD----RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVVVP 97 (534)
T ss_pred HHHhCCCCcEEEec---CC----CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEEee
Confidence 57789999999875 32 158999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++|+.++++++|++............ ......+.+....... .......+.... ....
T Consensus 98 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~ 166 (534)
T PRK05852 98 LDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT---RWWPLTVNVGGDSGPS------GGTLSVHLDAAT--EPTP 166 (534)
T ss_pred cCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc---cccceeeeeccccccc------cccccccccccc--CCCc
Confidence 9999999999999999999999998653321111000 0011111111100000 000000000000 0000
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
........+++.++++|||||||.||+|.++|.++...+......+ ++..+|++++..|++|.+++.. ++.++.
T Consensus 167 ~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 241 (534)
T PRK05852 167 ATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-----RLSPRDATVAVMPLYHGHGLIAALLATLA 241 (534)
T ss_pred cccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCcceEEEecCcchhHHHHHHHHHHHh
Confidence 0111122356889999999999999999999999998888776665 7888999999999999999876 555688
Q ss_pred cCceEEEecC---ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 241 RGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 241 ~G~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
.|+++++... ++..+++.++++++|+++++|.+++.+.+......
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-------------------------------- 289 (534)
T PRK05852 242 SGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP-------------------------------- 289 (534)
T ss_pred cCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc--------------------------------
Confidence 8888887542 78899999999999999999999998865321100
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC-------CccccCccC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD-------EMCMVGTAG 390 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~-------~~~~~~~~G 390 (611)
.....+++|.++++|+++++++.+++.+.++.++++.||+||++..++..... .....+..|
T Consensus 290 -----------~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g 358 (534)
T PRK05852 290 -----------SGRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVG 358 (534)
T ss_pred -----------ccccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccccCcccccccCC
Confidence 00012589999999999999999999999999999999999999766644321 111223344
Q ss_pred CCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeE
Q 007257 391 PVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLI 470 (611)
Q Consensus 391 ~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i 470 (611)
+ .++++++++| +++ .+++.++.|||+++|+.++.||+++++.+.+.|.+|||+|||+|++|+||++++.||.+|+|
T Consensus 359 ~-~~g~~~~i~d-~~g--~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i 434 (534)
T PRK05852 359 R-STGAQIRIVG-SDG--LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRGRIKELI 434 (534)
T ss_pred C-CCCCeEEEEC-CCC--CCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeCCCcEEEEecchhhE
Confidence 4 6899999998 555 45667889999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHH
Q 007257 471 KISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSE 547 (611)
Q Consensus 471 ~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (611)
++ +|.+|+|.+||++|.++|+|.+|+|++.++. +.+++++++++... . + .++
T Consensus 435 ~~-~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~--------~--------~--------~~~ 489 (534)
T PRK05852 435 NR-GGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAP--------P--------T--------AEE 489 (534)
T ss_pred EE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCC--------C--------C--------HHH
Confidence 96 9999999999999999999999999998764 36888888754310 0 1 123
Q ss_pred HHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 548 LKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 548 l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
|.++++ .+||.+++|+.+++++++ |+|++||++|++|+++|..
T Consensus 490 i~~~~~-~~l~~~~~P~~i~~v~~i------P~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 490 LVQFCR-ERLAAFEIPASFQEASGL------PHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred HHHHHH-HhcccccCCeEEEEhhhc------CCCCCccccHHHHHHHhcc
Confidence 444443 679999999999999766 9999999999999998854
No 46
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=7e-63 Score=535.26 Aligned_cols=486 Identities=22% Similarity=0.239 Sum_probs=391.9
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||.||++++.++|..|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 30 ~a~~~p~~~a~~~~---~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vp 100 (542)
T PRK06155 30 QAERYPDRPLLVFG---G------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVP 100 (542)
T ss_pred HHHHCCCCeEEEeC---C------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEE
Confidence 57889999999876 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..+++.+++++++++.+....+...... ....+.++.++..... .....|..........
T Consensus 101 l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 170 (542)
T PRK06155 101 INTALRGPQLEHILRNSGARLLVVEAALLAALEAADPG-DLPLPAVWLLDAPASV---------SVPAGWSTAPLPPLDA 170 (542)
T ss_pred eccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccc-ccCcceEEEecCcccc---------ccccccchhhhcccCC
Confidence 99999999999999999999999998766554332221 1233445555432210 0001111110000111
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.++|.++..........+ ++..++++++..|++|..++...+.++..
T Consensus 171 ~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~~~~~~~~~~l~~ 245 (542)
T PRK06155 171 PAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-----EIGADDVLYTTLPLFHTNALNAFFQALLA 245 (542)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-----CCCCCCEEEEecCHHHHHHHHHHHHHHHc
Confidence 1122344678999999999999999999999999987776655555 78889999999999999998877888999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++.+. ++..++..++++++|+++++|+++..+.+.....
T Consensus 246 G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~------------------------------------ 289 (542)
T PRK06155 246 GATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARE------------------------------------ 289 (542)
T ss_pred CceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcc------------------------------------
Confidence 999998876 8999999999999999999999988776421110
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
....++++.++.+| +++.+.+.+.+.+++++++.||+||++.++..... ...++++|.+.++++++|
T Consensus 290 ---------~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~--~~~~~~vG~~~~~~~~~i 356 (542)
T PRK06155 290 ---------SDRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTHG--SQRPGSMGRLAPGFEARV 356 (542)
T ss_pred ---------ccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCccccCCCC--CCCCCCcCccCCCceEEE
Confidence 00114788777655 57889999999899999999999999987765432 234578999999999999
Q ss_pred eecCCCCCCCCCCCCCcEEEEecC---CcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCcee
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEY 477 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~ 477 (611)
++ +++ .+++.++.|||+++|+ +++.||+++++.+.+.|.+|||+|||+|++++||++++.||.+|+|++ +|.+
T Consensus 357 ~d-~~~--~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~-~G~~ 432 (542)
T PRK06155 357 VD-EHD--QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIKDAIRR-RGEN 432 (542)
T ss_pred EC-CCC--CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCCCEEEe-CCEE
Confidence 98 554 4566778999999998 689999999999999999999999999999999999999999999996 9999
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (611)
|+|.+||++|.+||+|.+|+|++.+++ ..+.+++++..+.. . + ..++.++++
T Consensus 433 v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~--------~--------~--------~~~~~~~~~- 487 (542)
T PRK06155 433 ISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTA--------L--------E--------PVALVRHCE- 487 (542)
T ss_pred ECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCC--------C--------C--------HHHHHHHHH-
Confidence 999999999999999999999987764 46778887765320 0 1 123444443
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHH
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYY 595 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~ 595 (611)
..|+.+++|..|+++++. |+|++||++|++|++++
T Consensus 488 ~~l~~~~~P~~i~~~~~i------P~t~~GKi~r~~l~~~~ 522 (542)
T PRK06155 488 PRLAYFAVPRYVEFVAAL------PKTENGKVQKFVLREQG 522 (542)
T ss_pred hhCcCccCCcEEEEeccC------CCCcccceeHHHHHhhc
Confidence 679999999999998765 99999999999999876
No 47
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-63 Score=554.93 Aligned_cols=464 Identities=22% Similarity=0.204 Sum_probs=376.3
Q ss_pred CCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT 85 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~ 85 (611)
+||++|+++. ..+||.||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++|++|.
T Consensus 19 ~pd~~a~~~~----------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~ 88 (705)
T PRK06060 19 WYDRPAFYAA----------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPE 88 (705)
T ss_pred CCCceEEEec----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCC
Confidence 7999999754 479999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcc-cccCCc
Q 007257 86 LGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLG-KVNEME 164 (611)
Q Consensus 86 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 164 (611)
++.+++.++++.++++++|++......+... .++ ....+.... ...+..
T Consensus 89 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---------~~~---------------------~~~~~~~~~~~~~~~~ 138 (705)
T PRK06060 89 LHRDDHALAARNTEPALVVTSDALRDRFQPS---------RVA---------------------EAAELMSEAARVAPGG 138 (705)
T ss_pred CCHHHHHHHHhcCCCcEEEEchHHhhhhccc---------ccc---------------------hhhhhhhhccccCCCC
Confidence 9999999999999999999987644332110 000 000011000 001111
Q ss_pred CCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcc-cccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhhcC
Q 007257 165 ILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVD-LFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRG 242 (611)
Q Consensus 165 ~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G 242 (611)
..+..++++++++|||||||.||+|.++|.++...+..+. ..+ ++...+++++..|++|.+++.. ++.++..|
T Consensus 139 ~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G 213 (705)
T PRK06060 139 YEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-----RLTPEDTGLCSARMYFAYGLGNSVWFPLATG 213 (705)
T ss_pred CCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-----CCCCcceeEEeccchhhcchhHHHHHHHhcC
Confidence 2234678999999999999999999999999987765543 233 6778899999999999888754 56678999
Q ss_pred ceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 243 ASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 243 ~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
+++++.+. ++..++..++++++|+++++|+++..+.+....
T Consensus 214 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~------------------------------------- 256 (705)
T PRK06060 214 GSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP------------------------------------- 256 (705)
T ss_pred CEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc-------------------------------------
Confidence 99998864 788889999999999999999999887642110
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR 399 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~ 399 (611)
..++++|.+++||+++++++.+.+.+.+ +.++++.||+||++..+....... ...+++|+|+++++++
T Consensus 257 ----------~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-~~~~~iG~p~~~~~v~ 325 (705)
T PRK06060 257 ----------DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDE-WRLGTLGRVLPPYEIR 325 (705)
T ss_pred ----------ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCCC-CCcCcccccCCCcEEE
Confidence 0124899999999999999999999888 589999999999987655443222 2347899999999999
Q ss_pred EeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecC
Q 007257 400 LEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVA 479 (611)
Q Consensus 400 i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~ 479 (611)
+++ +++ .+++.|+.|||+|+|++++.||+++++.+.. .+|||+|||+|++++||++++.||.||+||+ +|++|+
T Consensus 326 i~d-~~g--~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~--~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~-~G~~v~ 399 (705)
T PRK06060 326 VVA-PDG--TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVA--NEGWLDTRDRVCIDSDGWVTYRCRADDTEVI-GGVNVD 399 (705)
T ss_pred EEC-CCC--CCCCCCCceEEEEccchhhhhhhCCCccccc--CCCcEECCeeEEECCCceEEEecccCceEEE-CCEEEC
Confidence 998 554 4567788999999999999999999886532 4799999999999999999999999999997 999999
Q ss_pred cHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCC
Q 007257 480 LEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNK 556 (611)
Q Consensus 480 ~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (611)
|.+||++|.+||+|.+++|++.++. +.+++++++..+.. .+. ...+.++++++ ++
T Consensus 400 ~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~-----------------~~~----~~~~~i~~~l~-~~ 457 (705)
T PRK06060 400 PREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGAT-----------------IDG----SVMRDLHRGLL-NR 457 (705)
T ss_pred HHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccC-----------------cCh----HHHHHHHHHHH-Hh
Confidence 9999999999999999999987754 37889998765320 011 11234555554 67
Q ss_pred CCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 557 LRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 557 l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
||.|++|..|+++++. |+|++||++|++|++.+.
T Consensus 458 L~~~~~P~~i~~v~~i------P~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 458 LSAFKVPHRFAVVDRL------PRTPNGKLVRGALRKQSP 491 (705)
T ss_pred CCCCcCCcEEEEeecC------CCCcchhhHHHHHHhhcc
Confidence 9999999999999765 999999999999998763
No 48
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.2e-62 Score=534.13 Aligned_cols=490 Identities=21% Similarity=0.232 Sum_probs=390.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.++++||++|+++. ++..+..+.+||+||.+++.++|.+|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 31 ~~~~~p~~~a~~~~---~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~ 107 (538)
T TIGR03208 31 AVANCPDKPALTAY---RDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNP 107 (538)
T ss_pred HHHHCCCceEEEee---cccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEec
Confidence 46779999999875 333344579999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHH----HHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVK----ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHL 157 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (611)
++|.++.+++.++++.++++++++++.... ..........+....++..+.... ..|+.++..
T Consensus 108 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 174 (538)
T TIGR03208 108 LMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGD-------------DSFDRVLMT 174 (538)
T ss_pred cCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCC-------------cCHHHHhhc
Confidence 999999999999999999999999875321 111111112233445555543211 122222211
Q ss_pred cccc-------CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHH
Q 007257 158 GKVN-------EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHIL 230 (611)
Q Consensus 158 ~~~~-------~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 230 (611)
.... ........++++++++|||||||.||+|.++|.++...+......+ ++..++++++.+|++|..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~ 249 (538)
T TIGR03208 175 PERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-----ELGGGDVILMASPMAHQT 249 (538)
T ss_pred cccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-----CCCCCCeEEEeCCchhHH
Confidence 1000 0111234678999999999999999999999999998887766655 678899999999999998
Q ss_pred HHHH-HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh
Q 007257 231 DRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN 308 (611)
Q Consensus 231 g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
++.. .+.++..|+++++.+. ++..+++.++++++|++.++|.++..+........
T Consensus 250 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~----------------------- 306 (538)
T TIGR03208 250 GFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESG----------------------- 306 (538)
T ss_pred HHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccC-----------------------
Confidence 8765 5667899999988776 89999999999999999999999988765321110
Q ss_pred hcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCc-cccC
Q 007257 309 MGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEM-CMVG 387 (611)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~-~~~~ 387 (611)
..++++|.+++||+++++++.+++.+.+|+++++.||+||++++......... ....
T Consensus 307 ----------------------~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 364 (538)
T TIGR03208 307 ----------------------APVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKAST 364 (538)
T ss_pred ----------------------CCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhccC
Confidence 11248999999999999999999998889999999999999887665543321 2235
Q ss_pred ccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccC
Q 007257 388 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKK 467 (611)
Q Consensus 388 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~ 467 (611)
++|.|++++++++++ +++ .+++.|+.|||+++|++++.||+++++.+.. ..+|||+|||+|+++++|.+++.||.+
T Consensus 365 ~~G~~~~g~~v~i~~-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~~~gR~~ 440 (538)
T TIGR03208 365 TDGRPLPGVEVKVID-ANG--AKLSQGETGRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDLAFQDAEGYIRINGRSK 440 (538)
T ss_pred cccccCCCCEEEEEC-CCC--CCCcCCCCcEEEEecCcccccccCCcccccc-cCCCceeccceEEECCCCcEEEEeccC
Confidence 789999999999998 554 3556788999999999999999999887642 368999999999999999999999999
Q ss_pred CeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHH
Q 007257 468 NLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYI 544 (611)
Q Consensus 468 d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
|+|++ +|++|+|.+||++|.+||+|.+++|++.++. +.+.+++++..+.. . +
T Consensus 441 ~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~--------~--------~-------- 495 (538)
T TIGR03208 441 DVIIR-GGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCT--------L--------D-------- 495 (538)
T ss_pred ceEEE-CCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCC--------C--------C--------
Confidence 99996 9999999999999999999999999997655 47888988765320 0 1
Q ss_pred HHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHH
Q 007257 545 LSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLL 592 (611)
Q Consensus 545 ~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~ 592 (611)
.+++.+++.+.+++.+++|+.++++++. |+|++||++|++|+
T Consensus 496 ~~~l~~~~~~~~l~~~~~P~~i~~v~~i------P~t~~gKv~r~~L~ 537 (538)
T TIGR03208 496 FAAMVAFLKAQKVALQYIPERLEVVDAL------PATPAGKIQKFRLR 537 (538)
T ss_pred HHHHHHHHHhcchhhccCCcEEEEeccC------CCCCccccchHhhc
Confidence 1234444443478999999999998765 99999999999985
No 49
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.5e-62 Score=531.29 Aligned_cols=493 Identities=23% Similarity=0.280 Sum_probs=392.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. + ..++++++||.||+++++++|..|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 16 ~a~~~p~~~a~~~~---~-~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~ 91 (517)
T PRK08008 16 LADVYGHKTALIFE---S-SGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVP 91 (517)
T ss_pred HHHHCCCceEEEcc---c-CCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEE
Confidence 57889999999986 4 4556689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++++++++++++++....+.+.........+.++..+.... ......+++++.......
T Consensus 92 l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 163 (517)
T PRK08008 92 INARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALP--------ADDGVSSFTQLKAQQPAT 163 (517)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCc--------ccccccCHHHHhccCCcc
Confidence 999999999999999999999999987665443322222233444544443211 011223444443322211
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
.....+..++++++++|||||||.||+|.++|.++........... .+..++++++.+|++|..+... ++.++.
T Consensus 164 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 238 (517)
T PRK08008 164 LCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-----ALRDDDVYLTVMPAFHIDCQCTAAMAAFS 238 (517)
T ss_pred ccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-----CCCCCCeEEEecCcHHHHHHHHHHHHHHh
Confidence 1222344678999999999999999999999999986543322222 4678899999999999877665 556788
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.++++++|++.++|.+++.+........
T Consensus 239 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---------------------------------- 284 (517)
T PRK08008 239 AGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSAN---------------------------------- 284 (517)
T ss_pred cCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccc----------------------------------
Confidence 9999999877 89999999999999999999999988754211000
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEE
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR 399 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~ 399 (611)
....+++.+.++ .+++++..+.|.+.+|.++++.||+||+++.+....+.....+.++|.|+++++++
T Consensus 285 -----------~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~ 352 (517)
T PRK08008 285 -----------DRQHCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAE 352 (517)
T ss_pred -----------cccccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCccccCCCCcEEE
Confidence 001267777665 47899999999988899999999999998766655544445567899999999999
Q ss_pred EeecCCCCCCCCCCCCCcEEEEec---CCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCc
Q 007257 400 LEEVPEMGYSPLDDPPCGEVCVRG---KTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQG 475 (611)
Q Consensus 400 i~~~~~~~~~~~~~~~~Gel~v~~---~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G 475 (611)
++| +++ .+++.|+.|||+++| ++++.||+++++.+.+.| .+|||+|||+|++|+||++++.||.+|+|++ +|
T Consensus 353 i~d-~~~--~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G 428 (517)
T PRK08008 353 IRD-DHN--RPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKR-GG 428 (517)
T ss_pred EEC-CCC--CCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEe-CC
Confidence 998 554 456677899999998 689999999999999998 6899999999999999999999999999996 89
Q ss_pred eecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHH
Q 007257 476 EYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAA 552 (611)
Q Consensus 476 ~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (611)
++|+|.+||++|.+||.|.+++|++.++. +.+.++|+++.+.. . + .+++.+++
T Consensus 429 ~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~--------~--------~--------~~~l~~~~ 484 (517)
T PRK08008 429 ENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGET--------L--------S--------EEEFFAFC 484 (517)
T ss_pred EEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCC--------C--------C--------HHHHHHHH
Confidence 99999999999999999999999998755 47889998876420 0 1 12344454
Q ss_pred HhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHH
Q 007257 553 ERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLL 592 (611)
Q Consensus 553 ~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~ 592 (611)
+ +.++.+++|..+.+++.. |+|++||++|+.|+
T Consensus 485 ~-~~l~~~~~P~~~~~v~~i------P~t~~gK~~r~~l~ 517 (517)
T PRK08008 485 E-QNMAKFKVPSYLEIRKDL------PRNCSGKIIKKNLK 517 (517)
T ss_pred H-hhcccccCCcEEEEeccC------CCCCccceehhhcC
Confidence 4 679999999999998665 99999999999863
No 50
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.5e-63 Score=594.57 Aligned_cols=528 Identities=17% Similarity=0.130 Sum_probs=395.2
Q ss_pred ccccCCCCCceeeeccccCC---CCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 2 SVQKYPGNRMLGWRPFVDGK---FGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~---~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
+|+++||++|+++. +.. ....+++||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 245 ~a~~~pd~~A~~~~---~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~~ 321 (1389)
T TIGR03443 245 NAEKHPDRTCVVET---PSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGAT 321 (1389)
T ss_pred HHHhCCCCeEEEec---cccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCcE
Confidence 57889999999875 211 223479999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCCChhHHHHHHhhcCccEEEEcchhH---HHHhcccccc---ccCccEEEEecCCcHHHHHHhhhCCCceeeHH
Q 007257 79 CVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV---KELLSPDCRS---AQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 152 (611)
Q Consensus 79 ~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (611)
++|++|.++.+++.++++.+++++++++.... ..+....... ......+. +.+.... ..........
T Consensus 322 ~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~ 394 (1389)
T TIGR03443 322 FSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSL------VGGSLEGGET 394 (1389)
T ss_pred EeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-ecccccc------cccccccccc
Confidence 99999999999999999999999999876421 1110000000 00111111 1110000 0000000000
Q ss_pred HHHhccc--ccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHH
Q 007257 153 EFLHLGK--VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHIL 230 (611)
Q Consensus 153 ~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 230 (611)
++..... ..........++++++++|||||||.||||+++|+++.+.+......+ ++..+|++++..|++|..
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~d~ 469 (1389)
T TIGR03443 395 DVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-----GLSENDKFTMLSGIAHDP 469 (1389)
T ss_pred cccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEEEEecCceecc
Confidence 0000000 001112234678999999999999999999999999999887776666 788899999999999998
Q ss_pred HHHHHHHHhhcCceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 007257 231 DRVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAW 306 (611)
Q Consensus 231 g~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
++..++.+++.|+++++.+. ++..+++.++++++|+++++|++++.+.....
T Consensus 470 ~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~------------------------ 525 (1389)
T TIGR03443 470 IQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT------------------------ 525 (1389)
T ss_pred hHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc------------------------
Confidence 88888889999999998764 67899999999999999999999987753110
Q ss_pred HhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCC---
Q 007257 307 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE--- 382 (611)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~--- 382 (611)
..++++|.+++||+++++...+.+.+.+ +++++|.||+||++..++......
T Consensus 526 ------------------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 581 (1389)
T TIGR03443 526 ------------------------TPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSS 581 (1389)
T ss_pred ------------------------ccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEcccccc
Confidence 0124899999999999999999888765 789999999999987665432211
Q ss_pred -------ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc-------------
Q 007257 383 -------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII------------- 442 (611)
Q Consensus 383 -------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------- 442 (611)
.....++|.|+++++++|++ +++...+++.|+.|||+|+||+++.||+++|+.|.+.|.
T Consensus 582 ~~~~~~~~~~~~~~G~~~~~~~~~ivd-~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~ 660 (1389)
T TIGR03443 582 DSTFLKNLKDVMPAGKGMKNVQLLVVN-RNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDL 660 (1389)
T ss_pred ccchhhcccCcCcCCCccCCCEEEEEC-CccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCccccccc
Confidence 01235789999999999998 666667788899999999999999999999999998872
Q ss_pred ----------------CCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC--
Q 007257 443 ----------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK-- 504 (611)
Q Consensus 443 ----------------~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~-- 504 (611)
++||+|||+|++++||.|++.||.||+||+ +|++|+|.+||++|.+||.|.+++|++.++.
T Consensus 661 ~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki-~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~ 739 (1389)
T TIGR03443 661 DKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI-RGFRIELGEIDTHLSQHPLVRENVTLVRRDKDE 739 (1389)
T ss_pred ccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe-CcEEecHHHHHHHHHhCcchheeEEEEeeCCCC
Confidence 479999999999999999999999999997 9999999999999999999999999875543
Q ss_pred -CeEEEEEecChHHH--HHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccc
Q 007257 505 -SMLVAVVVPCEEDT--KKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVT 581 (611)
Q Consensus 505 -~~~~a~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t 581 (611)
+.++|++++..+.. ..+.............+...+......+.++++++ .+||.|++|..+++++.. |+|
T Consensus 740 ~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Lp~y~~P~~~~~~~~l------P~t 812 (1389)
T TIGR03443 740 EPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLK-KKLPSYAIPTVIVPLKKL------PLN 812 (1389)
T ss_pred CeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHHHHHHH-hhCCcccCCceEEEcccC------CCC
Confidence 47999999873210 00000000000000000001112233456677775 789999999999888654 999
Q ss_pred cccccchHHHHHHHHHHHHH
Q 007257 582 ATLKKKRNKLLIYYQVEIDQ 601 (611)
Q Consensus 582 ~~GKv~R~~l~~~~~~~~~~ 601 (611)
++||++|++|.+.+..+++.
T Consensus 813 ~~GKidr~~L~~~~~~~~~~ 832 (1389)
T TIGR03443 813 PNGKVDKPALPFPDTAQLAA 832 (1389)
T ss_pred CCccccHhhcCCCchhhhhh
Confidence 99999999997665555443
No 51
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-62 Score=529.77 Aligned_cols=498 Identities=21% Similarity=0.273 Sum_probs=391.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++|+++++.+. ..+.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 19 ~~~~~~~~~~~~~~-----~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~ 93 (539)
T PRK07008 19 AARHAGDTEIVSRR-----VEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHT 93 (539)
T ss_pred HHhhCCCceEEEee-----ccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEee
Confidence 46677888787654 1234578999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++..+++.++++++++++.....+.+... .......++...+.... ........+++++......
T Consensus 94 l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~- 166 (539)
T PRK07008 94 INPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAP-QCPNVKGWVAMTDAAHL-----PAGSTPLLCYETLVGAQDG- 166 (539)
T ss_pred cccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHh-hCCCceEEEEEccCCcc-----ccCCcccccHHHHhcccCC-
Confidence 9999999999999999999999999876554332211 22344444444432210 0011224456666543321
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhh--hcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVS--GVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFF 239 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~--~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l 239 (611)
........++++++++|||||||.||+|++||.++..... .....+ ++..+|++++..|++|.+++...+.++
T Consensus 167 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~~~~~~~~~l 241 (539)
T PRK07008 167 DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-----GLSARDAVLPVVPMFHVNAWGLPYSAP 241 (539)
T ss_pred CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-----CCCCCceEEecCchHHhhhHHHHHHHH
Confidence 1122345678899999999999999999999999864322 222223 677889999999999988877667778
Q ss_pred hcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 240 RRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 240 ~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
..|+++++.+. ++..+++.++++++|++.++|+++..+.+......
T Consensus 242 ~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~-------------------------------- 289 (539)
T PRK07008 242 LTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAG-------------------------------- 289 (539)
T ss_pred hcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccC--------------------------------
Confidence 89999998754 89999999999999999999999988865322110
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC----------ccccC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE----------MCMVG 387 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~----------~~~~~ 387 (611)
..+++++.++++|+++++++.+.+.+.++.++++.||+||++..+..+.... .....
T Consensus 290 -------------~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (539)
T PRK07008 290 -------------LRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLE 356 (539)
T ss_pred -------------CCcccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcc
Confidence 0124899999999999999999999889999999999999997655443111 11236
Q ss_pred ccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccC
Q 007257 388 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKK 467 (611)
Q Consensus 388 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~ 467 (611)
++|.|+|++++++++ +++...+.+.++.|||+++|++++.||+++++ ..+.+|||+|||+|++++||++++.||.+
T Consensus 357 ~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~~~g~~~TGD~~~~~~dg~l~~~GR~~ 432 (539)
T PRK07008 357 KQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDA---SPLVDGWFPTGDVATIDADGFMQITDRSK 432 (539)
T ss_pred cCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcCChh---hhhcCCCcccCceEEEcCCCcEEEeeccc
Confidence 789999999999998 66654544445679999999999999999883 34568999999999999999999999999
Q ss_pred CeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHH
Q 007257 468 NLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYI 544 (611)
Q Consensus 468 d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
|+|+. +|.+|+|.+||+.+.++|.|.+++|++.++. +.++++|+..++.. . +
T Consensus 433 d~i~~-~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~--------~-------- 487 (539)
T PRK07008 433 DVIKS-GGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGAE--------V--------T-------- 487 (539)
T ss_pred CEEEe-CCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeCCCCc--------c--------C--------
Confidence 99996 9999999999999999999999999997764 46777777665320 0 1
Q ss_pred HHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 545 LSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 545 ~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.+.+.++++ ++|+.|+.|+.+++++.. |+|++||++|++|++++.+
T Consensus 488 ~~~l~~~~~-~~l~~~~~P~~i~~v~~l------P~t~sgKi~r~~l~~~~~~ 533 (539)
T PRK07008 488 REELLAFYE-GKVAKWWIPDDVVFVDAI------PHTATGKLQKLKLREQFRD 533 (539)
T ss_pred HHHHHHHHH-hhcccccCCeEEEEecCC------CCCCccceeHHHHHHHHHh
Confidence 123444554 679999999999998665 9999999999999998865
No 52
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-62 Score=536.56 Aligned_cols=508 Identities=21% Similarity=0.268 Sum_probs=398.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+|..+||++|+++. + + +++.+||.||.+++.++|.+|.+ .|+++||+|+++++|+++++++++||+++|++++
T Consensus 19 ~a~~~~~~~a~~~~---~-~--~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v 92 (576)
T PRK05620 19 GSTVHGDTTVTTWG---G-A--EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFN 92 (576)
T ss_pred HHHhCCCceEEEEc---C-C--ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEe
Confidence 46789999999874 2 1 34799999999999999999987 6999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
+++|.++.+++.++++.++++++|+++.....+..... ..+....++..+..................+|.++.... .
T Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 170 (576)
T PRK05620 93 PLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILK-ECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGR-S 170 (576)
T ss_pred ecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHh-hCccccEEEEecCcccccchhccccccccccHHHHhhcC-C
Confidence 99999999999999999999999999876554432222 223444555544321111000111122345677776533 2
Q ss_pred cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcc--cccccccCCCCCCcEEEEecchhhHHHHHHHHHH
Q 007257 161 NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVD--LFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYF 238 (611)
Q Consensus 161 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~--~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 238 (611)
.........++++++++|||||||.||+|.++|.++........ ..+ .+..++++++.+|++|.+++...+.+
T Consensus 171 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~g~~~~~~~ 245 (576)
T PRK05620 171 TVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-----AVTHGESFLCCVPIYHVLSWGVPLAA 245 (576)
T ss_pred CcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-----CCCCCCeEEEeCChHHhhhhHHHHHH
Confidence 22223345678999999999999999999999999865443321 122 57789999999999999998877888
Q ss_pred hhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 239 FRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 239 l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
+..|+++++... ++..+++.++++++|+++++|+++..+........
T Consensus 246 l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~------------------------------- 294 (576)
T PRK05620 246 FMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP------------------------------- 294 (576)
T ss_pred HhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC-------------------------------
Confidence 999999988754 89999999999999999999999988765321100
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC-------ccccCcc
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-------MCMVGTA 389 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~-------~~~~~~~ 389 (611)
...+++|.+++||+++++.+.+.|.+.+|+++++.||+||++..+....+.. .....++
T Consensus 295 --------------~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (576)
T PRK05620 295 --------------PERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQ 360 (576)
T ss_pred --------------cccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCcccccccccccccc
Confidence 0013799999999999999999999888999999999999998765543321 0112478
Q ss_pred CCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhh----------------hhhc-cCCccccCceE
Q 007257 390 GPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLT----------------RESI-IDGWFHTGDIG 452 (611)
Q Consensus 390 G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~----------------~~~~-~~g~~~TGD~~ 452 (611)
|++.+++++++++ + +...+.+.++.|||+++|++++.||+++++.+ ...| .+|||+|||++
T Consensus 361 G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~ 438 (576)
T PRK05620 361 GRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVG 438 (576)
T ss_pred CCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceE
Confidence 8999999999998 4 44343345578999999999999999999877 2233 47899999999
Q ss_pred EEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCC
Q 007257 453 QILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAG 529 (611)
Q Consensus 453 ~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~ 529 (611)
++++||.+++.||.+|+|+. +|.+|+|.+||+.|.+||.|.+|+|++.++. +.+++++++.++..
T Consensus 439 ~~~~dg~l~~~GR~~d~i~~-~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~----------- 506 (576)
T PRK05620 439 SVTRDGFLTIHDRARDVIRS-GGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIE----------- 506 (576)
T ss_pred EEcCCceEEEEechhhhhhc-CCEEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCC-----------
Confidence 99999999999999999995 9999999999999999999999999998765 36788887765420
Q ss_pred cHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 530 SFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
... ...+.|+++++ ++|+.+++|+.|+++++. |+|.+||++|++|++++++.
T Consensus 507 ------~~~----~~~~~l~~~l~-~~L~~~~~P~~i~~v~~~------P~t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 507 ------PTR----ETAERLRDQLR-DRLPNWMLPEYWTFVDEI------DKTSVGKFDKKDLRQHLADG 558 (576)
T ss_pred ------ccc----ccHHHHHHHHH-hhCccccCCeEEEEeccC------CCCCcccCcHHHHHHHHhcC
Confidence 000 01234555554 789999999999998765 99999999999999999763
No 53
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-62 Score=530.50 Aligned_cols=496 Identities=28% Similarity=0.363 Sum_probs=410.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++|+++|+.+. + +.+||+||++++.++|++|.+.|+++|++|+++++|++++++++|||+++|+++++
T Consensus 15 ~~~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~ 85 (521)
T PRK06187 15 GARKHPDKEAVYFD---G------RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHP 85 (521)
T ss_pred HHHHCCCceEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEe
Confidence 57889999999987 4 46999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..+++.+++++++++.+....+.+.. ...+..+.++..++.... ........+.++..... .
T Consensus 86 ~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~ 157 (521)
T PRK06187 86 INIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAIL-PQLPTVRTVIVEGDGPAA------PLAPEVGEYEELLAAAS-D 157 (521)
T ss_pred cccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHh-hccCCccEEEEecCcccc------ccccccccHHHHhhcCC-c
Confidence 999999999999999999999999987665543322 223444556655543310 11123445555544332 2
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.++|.++..........+ +++.++++++..|++|.+++...+.++..
T Consensus 158 ~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~ 232 (521)
T PRK06187 158 TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-----KLSRDDVYLVIVPMFHVHAWGLPYLALMA 232 (521)
T ss_pred cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-----CCCCCCEEEEeCCchHHhhHHHHHHHHHh
Confidence 2223455678999999999999999999999999998887766655 78899999999999999998887779999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++++. ++..+++.++++++|+++++|++++.+.+.....
T Consensus 233 G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~------------------------------------ 276 (521)
T PRK06187 233 GAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAY------------------------------------ 276 (521)
T ss_pred CCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC------------------------------------
Confidence 999999877 8999999999999999999999999886532210
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCc-----cccCccCCCccC
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEM-----CMVGTAGPVSVY 395 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~-----~~~~~~G~~~~~ 395 (611)
...++++|.+++||++++++..+++.+.+++++++.||+||+++++........ ...+++|.|+++
T Consensus 277 ---------~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 347 (521)
T PRK06187 277 ---------FVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPG 347 (521)
T ss_pred ---------ccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccccCCccccccCC
Confidence 011248999999999999999999999889999999999999987776554332 245889999999
Q ss_pred eeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCc
Q 007257 396 SELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQG 475 (611)
Q Consensus 396 ~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G 475 (611)
.+++|++ +++...+.+.++.|||+++|+.++.||+++++.+.+.|.+|||+|||+++++++|.+++.||.+|++++ +|
T Consensus 348 ~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~-~G 425 (521)
T PRK06187 348 VEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITDRIKDVIIS-GG 425 (521)
T ss_pred eEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcCCCCEEEeecccceEEc-CC
Confidence 9999999 666544443488999999999999999999999999999999999999999999999999999999997 99
Q ss_pred eecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHH
Q 007257 476 EYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAA 552 (611)
Q Consensus 476 ~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (611)
.+++|.+||+.|.++++|.+++|++.++. +.+.+++++.++.. . +. +.+.+++
T Consensus 426 ~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~--------~~--------~~l~~~l 481 (521)
T PRK06187 426 ENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGAT--------L--------DA--------KELRAFL 481 (521)
T ss_pred eEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCC--------C--------CH--------HHHHHHH
Confidence 99999999999999999999999987654 47888888765320 0 11 2233333
Q ss_pred HhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 553 ERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 553 ~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
++.|+.+.+|..++++++. |+|++||++|.+|+++|++
T Consensus 482 -~~~l~~~~~p~~i~~v~~~------P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 482 -RGRLAKFKLPKRIAFVDEL------PRTSVGKILKRVLREQYAE 519 (521)
T ss_pred -HHhccCCCCceEEEEccCC------CCCCCCCeeHHHHHHHHhc
Confidence 3678999999999998765 9999999999999999865
No 54
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2e-62 Score=530.99 Aligned_cols=484 Identities=19% Similarity=0.181 Sum_probs=385.9
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++|+++|+++. + +.+||.||.++++++|..|.+.|+++|++|+++++|++++++++|||+++|+++++
T Consensus 32 ~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~ 102 (527)
T TIGR02275 32 QAARYPDAIAIICG----N-----RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVL 102 (527)
T ss_pred HHHHCCCceEEEeC----C-----ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEec
Confidence 46789999999875 3 69999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHH----HHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVK----ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHL 157 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (611)
+++..+.+++.++++.++++++++++.... ..........+....++....... ..........
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 170 (527)
T TIGR02275 103 ALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRV------------EAELFLWLES 170 (527)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCC------------cchhhHHhhC
Confidence 999999999999999999999999865321 111111111223333333322110 0001111111
Q ss_pred ccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH--H
Q 007257 158 GKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI--E 235 (611)
Q Consensus 158 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~--~ 235 (611)
. ..........++++++++|||||||.||+|.++|.++...+......+ .+..++++++.+|++|.+++.. .
T Consensus 171 ~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~P~~h~~~~~~~~~ 244 (527)
T TIGR02275 171 P-AEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----WLTQQTRYLCALPAAHNYPLSSPGA 244 (527)
T ss_pred c-CccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCCEEEECCChHhhhhhhHHHH
Confidence 1 111122345678999999999999999999999999988877766555 6788999999999999998764 5
Q ss_pred HHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCC
Q 007257 236 EYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQR 314 (611)
Q Consensus 236 ~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (611)
+.++..|+++++.+. ++..+++.++++++|+++++|.+++.+.+......
T Consensus 245 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~----------------------------- 295 (527)
T TIGR02275 245 LGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSR----------------------------- 295 (527)
T ss_pred HHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccC-----------------------------
Confidence 667889999988765 89999999999999999999999988765322110
Q ss_pred CcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCc-
Q 007257 315 EASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS- 393 (611)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~- 393 (611)
..++++|.+++||+++++++.+.+.+.+|.++++.||+||++..............+++|.|+
T Consensus 296 ----------------~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~ 359 (527)
T TIGR02275 296 ----------------YDLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMS 359 (527)
T ss_pred ----------------CCccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccccccCCCCCC
Confidence 112489999999999999999999998999999999999966443322211222346789998
Q ss_pred cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEc
Q 007257 394 VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKI 472 (611)
Q Consensus 394 ~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~ 472 (611)
++.++++++ +++ .+++.|+.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++++||++++.||.+|+|++
T Consensus 360 ~~~~v~i~d-~~g--~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~ 436 (527)
T TIGR02275 360 PDDEVRVVD-DHG--NPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINR 436 (527)
T ss_pred CCceEEEEC-CCC--CCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeec
Confidence 488999988 554 456678899999999999999999999999888 6899999999999999999999999999996
Q ss_pred CCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHH
Q 007257 473 SQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELK 549 (611)
Q Consensus 473 ~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (611)
+|++|+|.+||+.|.+||+|.+++|++.++. +.++++|+++++.. + ..+|+
T Consensus 437 -~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~~-----------------~--------~~~l~ 490 (527)
T TIGR02275 437 -GGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPAL-----------------K--------AAQLR 490 (527)
T ss_pred -CCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCCCC-----------------C--------HHHHH
Confidence 9999999999999999999999999998765 47888888765310 1 12455
Q ss_pred HHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHH
Q 007257 550 NAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLL 592 (611)
Q Consensus 550 ~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~ 592 (611)
+++++..++.|++|..+.++++. |+|++||++|++|+
T Consensus 491 ~~l~~~~l~~~~~P~~i~~v~~i------P~t~sGKv~r~~L~ 527 (527)
T TIGR02275 491 RFLRERGLAEYKLPDRVEFIDSL------PLTAVGKIDKKALR 527 (527)
T ss_pred HHHHhCCCccccCCCEEEEeccC------CCCCccceeHHhcC
Confidence 55544469999999999999765 99999999999873
No 55
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-62 Score=531.01 Aligned_cols=496 Identities=25% Similarity=0.308 Sum_probs=400.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 20 ~a~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~ 90 (523)
T PRK08316 20 SARRYPDKTALVFG---D------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVP 90 (523)
T ss_pred HHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 46789999999986 3 69999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..+++.++++++++++.....+........ ...+........ .........+.++..... .
T Consensus 91 l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~ 161 (523)
T PRK08316 91 VNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP--VDTLILSLVLGG------REAPGGWLDFADWAEAGS-V 161 (523)
T ss_pred cccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--ccceeeeecccc------cccccchhhHHHHHhcCC-C
Confidence 9999999999999999999999999876655433221111 111111100000 000112334444433321 1
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHH-HHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEE-YFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~-~~l~ 240 (611)
........++++++++|||||||.||+|.++|.++..........+ ++..++++++.+|++|..++...+ .++.
T Consensus 162 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~~~ 236 (523)
T PRK08316 162 AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-----DMSADDIPLHALPLYHCAQLDVFLGPYLY 236 (523)
T ss_pred ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCCceEEEccCCchhhhHHHHHHHHHh
Confidence 1123345778999999999999999999999999988877665555 788899999999999999987644 4688
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.++++++|++.++|.++..+.+....
T Consensus 237 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------------------ 280 (523)
T PRK08316 237 VGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDF------------------------------------ 280 (523)
T ss_pred cCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCccc------------------------------------
Confidence 9999999865 999999999999999999999999887642110
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCC-ccccCccCCCccCee
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE-MCMVGTAGPVSVYSE 397 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~-~~~~~~~G~~~~~~~ 397 (611)
. ...+++++.+++||+.++.+..+.+.+.+ ++++++.||+||++.+.....+.. ....+++|.++++++
T Consensus 281 -~--------~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 351 (523)
T PRK08316 281 -D--------TRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVE 351 (523)
T ss_pred -c--------cCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcE
Confidence 0 01124899999999999999999999987 789999999999998776654432 234578999999999
Q ss_pred EEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCcee
Q 007257 398 LRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEY 477 (611)
Q Consensus 398 v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~ 477 (611)
+++.+ +++ .+++.++.|||+++|+.++.||+++++.+.+.|.+|||+|||+|++++||.+++.||.+|+|++ +|.+
T Consensus 352 ~~i~~-~~~--~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~-~G~~ 427 (523)
T PRK08316 352 TRVVD-DDG--NDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIKT-GGEN 427 (523)
T ss_pred EEEEc-CCC--CCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccccEEEe-CCeE
Confidence 99998 554 4566688999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (611)
|+|.+||+.|.++|+|.+++|++.++. +.++++++++++.. . . .+.+.++++
T Consensus 428 i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~----------~------~--------~~~l~~~~~- 482 (523)
T PRK08316 428 VASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGAT----------V------T--------EDELIAHCR- 482 (523)
T ss_pred ECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCC----------C------C--------HHHHHHHHH-
Confidence 999999999999999999999997655 36888888875420 0 1 122333443
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHH
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEID 600 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~ 600 (611)
..|+.+++|..++++++. |+|++||++|++|+++|++.++
T Consensus 483 ~~l~~~~~p~~i~~v~~~------p~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 483 ARLAGFKVPKRVIFVDEL------PRNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred HhcccCCCCcEEEEecCC------CCCCccceeHHHHHHHHHhhcc
Confidence 578999999999999665 9999999999999999987664
No 56
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-62 Score=528.68 Aligned_cols=490 Identities=24% Similarity=0.334 Sum_probs=402.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. + +++||+||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 14 ~~~~~~~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~ 84 (513)
T PRK07656 14 AARRFGDKEAYVFG----D-----QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVP 84 (513)
T ss_pred HHHHCCCCeEEEeC----C-----CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEe
Confidence 46789999999986 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..++++++++++++++.......... ...+....++......... ......+|.++......
T Consensus 85 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 85 LNTRYTADEAAYILARGDAKALFVLGLFLGVDYSAT-TRLPALEHVVICETEEDDP------HTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred cCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHH-hccCCccEEEEEcCccccc------CccccccHHHHHhcCCC-
Confidence 999999999999999999999999987655443221 2233444554444332110 01123456666544322
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
........++++++++|||||||.||+|.++|.++...+......+ ++..++++++..|++|.+++.. .+.++.
T Consensus 157 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (513)
T PRK07656 157 AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-----GLTEGDRYLAANPFFHVFGYKAGVNAPLM 231 (513)
T ss_pred CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-----CCCCCCeEEEccchHHHHHHHHHHHHHHH
Confidence 2233445778999999999999999999999999988887766665 7888999999999999999876 566789
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.++++++|+++++|.++..+.+......
T Consensus 232 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~---------------------------------- 277 (513)
T PRK07656 232 RGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSA---------------------------------- 277 (513)
T ss_pred cCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCC----------------------------------
Confidence 9999988766 89999999999999999999999998875321100
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCC-ceeeccccCCCCCceeeccCCCccc--cCccCCCccCe
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCFPDEMCM--VGTAGPVSVYS 396 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~~~~~~~~~~--~~~~G~~~~~~ 396 (611)
..++++|.+++||+++++++.+.+.+.++. ++++.||+||++++...+....... .+++|.+++++
T Consensus 278 -----------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 346 (513)
T PRK07656 278 -----------EDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGV 346 (513)
T ss_pred -----------CCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCc
Confidence 012489999999999999999999998988 8999999999998887776544322 57899999999
Q ss_pred eEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc-CCccccCceEEEccCCeEEEEeccCCeEEcCCc
Q 007257 397 ELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII-DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQG 475 (611)
Q Consensus 397 ~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G 475 (611)
++++++ +++ .+++.|+.|||+++|+.++.||++++..+...+. +|||+|||+|+++++|.+++.||.+|++++ +|
T Consensus 347 ~~~i~d-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~-~G 422 (513)
T PRK07656 347 ENKIVN-ELG--EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIV-GG 422 (513)
T ss_pred EEEEEC-CCC--CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEe-CC
Confidence 999998 554 4566778999999999999999999999988884 899999999999999999999999999997 99
Q ss_pred eecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHH
Q 007257 476 EYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAA 552 (611)
Q Consensus 476 ~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (611)
.+++|.+||+.|.++|+|.+++|++.++. +.+.++++++... .. +. +++.+++
T Consensus 423 ~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~--------~~--------~~--------~~l~~~~ 478 (513)
T PRK07656 423 FNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGA--------EL--------TE--------EELIAYC 478 (513)
T ss_pred EEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCC--------CC--------CH--------HHHHHHH
Confidence 99999999999999999999999987654 4678888876421 00 11 2344444
Q ss_pred HhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHH
Q 007257 553 ERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLI 593 (611)
Q Consensus 553 ~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~ 593 (611)
+ ..|+.+++|..++++++. |+|++||++|++|++
T Consensus 479 ~-~~l~~~~~p~~i~~v~~i------P~t~~gK~~r~~l~~ 512 (513)
T PRK07656 479 R-EHLAKYKVPRSIEFLDEL------PKNATGKVLKRALRE 512 (513)
T ss_pred H-hhcccccCCCEEEEecCC------CCCCccceeHHHHhc
Confidence 3 679999999999999665 999999999999875
No 57
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-62 Score=530.26 Aligned_cols=492 Identities=25% Similarity=0.284 Sum_probs=400.9
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+.+. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 26 ~a~~~~~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~vp 96 (542)
T PRK07786 26 HALMQPDAPALRFL---G------NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAVP 96 (542)
T ss_pred HHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEE
Confidence 46789999999876 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..++++++++++++++........ .....+....++...+... ....+++++......
T Consensus 97 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~- 164 (542)
T PRK07786 97 VNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATA-VRDIVPLLSTVVVAGGSSD----------DSVLGYEDLLAEAGP- 164 (542)
T ss_pred cCccCCHHHHHHHHHhCCCcEEEEccchHHHHHH-hhhccCccceEEEecCCCc----------ccccCHHHHhhccCC-
Confidence 9999999999999999999999998876554322 1122234445555443211 122345555433221
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCC-CCCcEEEEecchhhHHHHHHHHHHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKM-TVDDVYLSFLPLAHILDRVIEEYFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~-~~~~~~l~~~p~~~~~g~~~~~~~l~ 240 (611)
.........+++++++|||||||.||+|.++|.++...+......+ ++ ..++++++..|++|.+|+...+.++.
T Consensus 165 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 239 (542)
T PRK07786 165 AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-----GADINSDVGFVGVPLFHIAGIGSMLPGLL 239 (542)
T ss_pred CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-----CCCCCCceEEEecchHHHHHHHHHHHHHH
Confidence 1222345567899999999999999999999999988776655444 44 56789999999999999877888899
Q ss_pred cCceEEEecC---ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 241 RGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 241 ~G~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
.|+++++.+. ++..+++.++++++|+++++|+++..+........
T Consensus 240 ~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~-------------------------------- 287 (542)
T PRK07786 240 LGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP-------------------------------- 287 (542)
T ss_pred ccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc--------------------------------
Confidence 9999998752 89999999999999999999999998865321100
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCC-ccccCccCCCccC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE-MCMVGTAGPVSVY 395 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~-~~~~~~~G~~~~~ 395 (611)
...+++.+++||+++++++.+.+.+.+ +.++++.||+||++.+.+...... ....+++|.|+++
T Consensus 288 --------------~~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~ 353 (542)
T PRK07786 288 --------------RDLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPT 353 (542)
T ss_pred --------------cCcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCC
Confidence 002689999999999999999999988 789999999999998766544322 2345789999999
Q ss_pred eeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCc
Q 007257 396 SELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQG 475 (611)
Q Consensus 396 ~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G 475 (611)
+.+++++ +++ ..++.++.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|++ +|
T Consensus 354 ~~~~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~-~G 429 (542)
T PRK07786 354 VAARVVD-ENM--NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKDMIIS-GG 429 (542)
T ss_pred ceEEEEC-CCC--CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEecccceEEe-CC
Confidence 9999998 554 4556778999999999999999999999999999999999999999999999999999999997 99
Q ss_pred eecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHH
Q 007257 476 EYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAA 552 (611)
Q Consensus 476 ~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (611)
.+|++.+||++|.+||+|.+++|++.++. +.+.+++++..... . ...+++.+++
T Consensus 430 ~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-------------------~----~~~~~l~~~l 486 (542)
T PRK07786 430 ENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDA-------------------A----LTLEDLAEFL 486 (542)
T ss_pred EEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCC-------------------C----CCHHHHHHHH
Confidence 99999999999999999999999997654 46778887664310 0 0123444555
Q ss_pred HhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 553 ERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 553 ~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
+ ..++.|++|..++++++. |+|++||++|++|+++|++..
T Consensus 487 ~-~~l~~~~~P~~i~~v~~i------P~t~~GKv~r~~L~~~~~~~~ 526 (542)
T PRK07786 487 T-DRLARYKHPKALEIVDAL------PRNPAGKVLKTELRERYGACV 526 (542)
T ss_pred H-hhccCCCCCCEEEEeccC------CCCCcccccHHHHHHHHHhhh
Confidence 4 679999999999998765 999999999999999997754
No 58
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=9.6e-62 Score=528.33 Aligned_cols=497 Identities=22% Similarity=0.264 Sum_probs=396.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++||++|+++. ++ +.+||+||++++.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 32 ~~~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 103 (547)
T PRK06087 32 TARAMPDKIAVVDN---HG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVP 103 (547)
T ss_pred HHHHCCCceEEEcC---CC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEec
Confidence 46789999999875 43 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhH-----HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKV-----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLH 156 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
+++.++.+++.++++.++++++++++... ..+.. ..........++..+..... ....++.++..
T Consensus 104 l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 173 (547)
T PRK06087 104 LLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILP-LQNQLPQLQQIVGVDKLAPA---------TSSLSLSQIIA 173 (547)
T ss_pred cchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHH-HHhhCCCCcEEEEeCCcCCC---------cCccCHHHHhc
Confidence 99999999999999999999999976321 11111 11122333445554432210 01223444433
Q ss_pred cccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-H
Q 007257 157 LGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-E 235 (611)
Q Consensus 157 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~ 235 (611)
.... ........++++++++|||||||.||+|.++|.++......+...+ ++..++++++..|++|.+++.. .
T Consensus 174 ~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~g~~~~~ 247 (547)
T PRK06087 174 DYEP-LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-----NLTWQDVFMMPAPLGHATGFLHGV 247 (547)
T ss_pred cCCc-ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeEEEecchHHHHHHHHHH
Confidence 3211 1122335678999999999999999999999999988776655554 6788999999999999999765 5
Q ss_pred HHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCC
Q 007257 236 EYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQR 314 (611)
Q Consensus 236 ~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (611)
+.+++.|+++++.+. ++..+++.++++++|+++++|..+..++......
T Consensus 248 ~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~------------------------------ 297 (547)
T PRK06087 248 TAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQ------------------------------ 297 (547)
T ss_pred HHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccC------------------------------
Confidence 667888999998877 9999999999999999998887776665421110
Q ss_pred CcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC-ccccCccCCCc
Q 007257 315 EASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-MCMVGTAGPVS 393 (611)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~-~~~~~~~G~~~ 393 (611)
...++++|.+++||+++++++.+.+.+. |+++++.||+||+++......... ....+++|.++
T Consensus 298 ---------------~~~~~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~ 361 (547)
T PRK06087 298 ---------------PADLSALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAA 361 (547)
T ss_pred ---------------CCCCCCeEEEEEcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchhhcCCcCCccC
Confidence 0112589999999999999999988775 999999999999998766544332 22336789999
Q ss_pred cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEc
Q 007257 394 VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKI 472 (611)
Q Consensus 394 ~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~ 472 (611)
+++.++++| +++ .+++.|+.|||+++|+.++.||+++++.+...| .+|||+|||+++++++|.+++.||.+|+|+.
T Consensus 362 ~~~~~~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~ 438 (547)
T PRK06087 362 AGVEIKVVD-EAR--KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVR 438 (547)
T ss_pred CCceEEEEc-CCC--CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhc
Confidence 999999998 554 455678899999999999999999999998888 6899999999999999999999999999996
Q ss_pred CCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHH
Q 007257 473 SQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELK 549 (611)
Q Consensus 473 ~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 549 (611)
+|.+|+|.+||++|.++|+|.+++|++.++. +.+++++++..... .. + .+++.
T Consensus 439 -~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~---------~~------~--------~~~~~ 494 (547)
T PRK06087 439 -GGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH---------SL------T--------LEEVV 494 (547)
T ss_pred -CCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCC---------CC------C--------HHHHH
Confidence 9999999999999999999999999997655 37888888764210 00 1 12344
Q ss_pred HHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHH
Q 007257 550 NAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQ 601 (611)
Q Consensus 550 ~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~ 601 (611)
+++.+..++.+++|..|.++++. |+|++||++|++|++++.+.+.+
T Consensus 495 ~~~~~~~l~~~~~P~~i~~v~~i------P~t~sGK~~r~~l~~~~~~~~~~ 540 (547)
T PRK06087 495 AFFSRKRVAKYKYPEHIVVIDKL------PRTASGKIQKFLLRKDIMRRLTQ 540 (547)
T ss_pred HHHHhccccccCCCeEEEEeccC------CCCCCCcCcHHHHHHHHHHHhhh
Confidence 44434679999999999999765 99999999999999998877643
No 59
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-62 Score=529.47 Aligned_cols=490 Identities=24% Similarity=0.292 Sum_probs=390.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. + +++||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|+++++
T Consensus 16 ~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~ 86 (528)
T PRK07470 16 AARRFPDRIALVWG---D------RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVP 86 (528)
T ss_pred HHHHCCCceEEEEC---C------ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEe
Confidence 46789999999875 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.++++++++++........ ..........++.+.... ...++.++.......
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 153 (528)
T PRK07470 87 TNFRQTPDEVAYLAEASGARAMICHADFPEHAAA-VRAASPDLTHVVAIGGAR------------AGLDYEALVARHLGA 153 (528)
T ss_pred cCccCCHHHHHHHHHhcCceEEEEcchhHHHHHH-HHhhCCcCceEEEeCCCc------------ccccHHHHHhcCCCC
Confidence 9999999999999999999999999875443321 111112333444443321 022455554332222
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.++|.++...+......+ ..+....|+++..+|++|.+++...+ .+..
T Consensus 154 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~ 229 (528)
T PRK07470 154 RVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL---MPGTTEQDASLVVAPLSHGAGIHQLC-QVAR 229 (528)
T ss_pred CCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh---ccCCCcccEEEEeccchhHHHHHHHH-HHhc
Confidence 2223345678999999999999999999999999876544322111 11456789999999999999986543 5667
Q ss_pred CceEEEecC---ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 007257 242 GASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASP 318 (611)
Q Consensus 242 G~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (611)
|+++++++. ++..+++.++++++|++.++|++++.+.+....
T Consensus 230 g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----------------------------------- 274 (528)
T PRK07470 230 GAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAV----------------------------------- 274 (528)
T ss_pred CceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCc-----------------------------------
Confidence 777776643 889999999999999999999999887642110
Q ss_pred HHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC-------CccccCccCC
Q 007257 319 LADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD-------EMCMVGTAGP 391 (611)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~-------~~~~~~~~G~ 391 (611)
+ ...++++|.+++||+++++...+++.+.+|.++++.||+||+++.+...... .....+++|.
T Consensus 275 --~--------~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 344 (528)
T PRK07470 275 --D--------RYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGF 344 (528)
T ss_pred --C--------CCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccccccceeeccCc
Confidence 0 0112589999999999999999999888899999999999998876654321 1223478899
Q ss_pred CccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEE
Q 007257 392 VSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIK 471 (611)
Q Consensus 392 ~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~ 471 (611)
|++++++++++ +++ .+++.++.|||+++|+.++.||+++++.+...|.+|||+|||+|++++||++++.||.||+++
T Consensus 345 ~~~g~~~~i~d-~~~--~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~ 421 (528)
T PRK07470 345 ERTGMEVQIQD-DEG--RELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFLYITGRASDMYI 421 (528)
T ss_pred ccCCcEEEEEC-CCC--CCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEccCCeEEEeCCccceEE
Confidence 99999999998 554 356678899999999999999999999999989999999999999999999999999999999
Q ss_pred cCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHH
Q 007257 472 ISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSEL 548 (611)
Q Consensus 472 ~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (611)
+ +|++|+|.+||+.|.++|+|.+|+|++.++. +.+++++++.++.. . +. +++
T Consensus 422 ~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~--------~--------~~--------~~~ 476 (528)
T PRK07470 422 S-GGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAP--------V--------DE--------AEL 476 (528)
T ss_pred e-CCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCC--------C--------CH--------HHH
Confidence 6 8999999999999999999999999998765 36777887765320 0 11 234
Q ss_pred HHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 549 KNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 549 ~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.++++ +.|+.+++|..++++++. |+|++||++|+.|++++++
T Consensus 477 ~~~l~-~~l~~~~~P~~~~~~~~i------P~t~~GKi~r~~l~~~~~~ 518 (528)
T PRK07470 477 LAWLD-GKVARYKLPKRFFFWDAL------PKSGYGKITKKMVREELEE 518 (528)
T ss_pred HHHHH-HhhhcCCCCcEEEEeccC------CCCCcccccHHHHHHHHHh
Confidence 44443 678999999999988665 9999999999999998755
No 60
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=9.9e-62 Score=527.63 Aligned_cols=494 Identities=22% Similarity=0.268 Sum_probs=390.5
Q ss_pred CccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 1 MSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 1 ~~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
++|+++|+++|+++.. ++ +.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 36 ~~a~~~p~~~a~~~~~--~~-----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 108 (546)
T PLN02330 36 QDAELYADKVAFVEAV--TG-----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFS 108 (546)
T ss_pred hhhhcCCCccEEEecC--CC-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEec
Confidence 3578899999998641 12 5899999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|+++..+.+++.++++.++++++++++.....+... .. .++.++... ......|.++......
T Consensus 109 pl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~------~~-~~i~~~~~~----------~~~~~~~~~~~~~~~~ 171 (546)
T PLN02330 109 GANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL------GL-PVIVLGEEK----------IEGAVNWKELLEAADR 171 (546)
T ss_pred cCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc------CC-cEEEecCCC----------CCCcccHHHHHhhccc
Confidence 999999999999999999999999998766654321 11 123333211 1123346665544322
Q ss_pred cC--CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHH
Q 007257 161 NE--MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEY 237 (611)
Q Consensus 161 ~~--~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~ 237 (611)
.. .......++++++++|||||||.||+|.++|.++...+....... .......++.+...|++|.+++.. ++.
T Consensus 172 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~ 248 (546)
T PLN02330 172 AGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV---GPEMIGQVVTLGLIPFFHIYGITGICCA 248 (546)
T ss_pred cCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc---CccccCceEEEEecChHHHHHHHHHHHH
Confidence 11 112334578999999999999999999999999987654321111 112234568899999999999875 556
Q ss_pred HhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 238 FFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 238 ~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
++..|+++++.+. ++..+++.++++++|++.++|+++..+.....
T Consensus 249 ~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---------------------------------- 294 (546)
T PLN02330 249 TLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPI---------------------------------- 294 (546)
T ss_pred HhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcc----------------------------------
Confidence 7888999888876 99999999999999999999999988764211
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCC----ccccCccCC
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE----MCMVGTAGP 391 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~----~~~~~~~G~ 391 (611)
...+++.. .+++.+++||+++++++.+++.+.+ ++++++.||+||++.+........ ....+++|.
T Consensus 295 ---~~~~~~~~------~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~ 365 (546)
T PLN02330 295 ---VEEFDLSK------LKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGF 365 (546)
T ss_pred ---ccccccch------heeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCcccc
Confidence 00011110 1579999999999999999999988 899999999999986654332111 123468999
Q ss_pred CccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeE
Q 007257 392 VSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLI 470 (611)
Q Consensus 392 ~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i 470 (611)
|++++++++++ ++++ .+++.|+.|||+++|+.++.||+++++.+.+.+ .+|||+|||+|++++||++++.||.+|+|
T Consensus 366 ~~~~~~v~i~d-~~~~-~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i 443 (546)
T PLN02330 366 ILPNLEVKFID-PDTG-RSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELI 443 (546)
T ss_pred ccCCcEEEEEe-CCCC-ccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhh
Confidence 99999999998 4333 566778899999999999999999999998887 68999999999999999999999999999
Q ss_pred EcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHH
Q 007257 471 KISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSE 547 (611)
Q Consensus 471 ~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (611)
++ +|++|+|.+||+.|.++|+|.+++|++.++. +.++++|++.+... . + .+.
T Consensus 444 ~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~--------~--------~--------~~~ 498 (546)
T PLN02330 444 KY-KGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAK--------E--------S--------EED 498 (546)
T ss_pred hc-CCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCCC--------C--------C--------HHH
Confidence 97 8999999999999999999999999997654 47888888765320 0 1 123
Q ss_pred HHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 548 LKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 548 l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
|.++++ ..|+.++.|+.+.++++. |+|++||++|++|++++...
T Consensus 499 l~~~~~-~~l~~~~~p~~~~~v~~i------P~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 499 ILNFVA-ANVAHYKKVRVVQFVDSI------PKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred HHHHHH-HhcccccCceEEEEeccC------CCCCCcceeHHHHHHHHHhh
Confidence 344443 679999999999988765 99999999999999998653
No 61
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.6e-62 Score=544.84 Aligned_cols=480 Identities=20% Similarity=0.240 Sum_probs=370.7
Q ss_pred ccccCCC-CCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPG-NRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd-~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+++++|| ++|+.+. + ++.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++
T Consensus 213 ~~~~~p~~~~a~~~~---~-----~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~v 283 (718)
T PRK08043 213 AQYRYGAGKPCIEDV---N-----FTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRRIPA 283 (718)
T ss_pred HHHHhCCCCcceEcC---C-----CCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCCccc
Confidence 4678998 5777642 1 25899999999999999999887 59999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhc-cccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHH--H-h
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS-PDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEF--L-H 156 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~ 156 (611)
|+++.++.+++.+++++++++++|++++....... ......+... ++.+.+... ...+... . .
T Consensus 284 pl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~------------~~~~~~~~~~~~ 350 (718)
T PRK08043 284 MMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVR-WVYLEDLKD------------DVTTADKLWIFA 350 (718)
T ss_pred ccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhcccc-EEEhhhhhh------------hcchhHHHHHHH
Confidence 99999999999999999999999998775442110 0111111112 222221100 0001000 0 0
Q ss_pred cccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-H
Q 007257 157 LGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-E 235 (611)
Q Consensus 157 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~ 235 (611)
..........+..++++++++|||||||.||+|++||.++...+......+ ++..+|++++.+|++|.+++.. +
T Consensus 351 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~Pl~h~~g~~~~~ 425 (718)
T PRK08043 351 HLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-----DFTPNDRFMSALPLFHSFGLTVGL 425 (718)
T ss_pred HHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-----CCCccCeEEEcCcchhhhhhHHHH
Confidence 000001111234678999999999999999999999999998877665554 6788999999999999999876 5
Q ss_pred HHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCC
Q 007257 236 EYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQ 313 (611)
Q Consensus 236 ~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (611)
+.++..|+++++.+. ++..+.+.++++++|+++++|+++..+.+...
T Consensus 426 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~------------------------------- 474 (718)
T PRK08043 426 FTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFAN------------------------------- 474 (718)
T ss_pred HHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcC-------------------------------
Confidence 667999999998864 66788899999999999999998876543100
Q ss_pred CCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCc
Q 007257 314 REASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS 393 (611)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~ 393 (611)
. ..+++||.+++||+++++++.+.|.+.+|+++++.||+||+++.++...+.. ...+++|+|+
T Consensus 475 --------~--------~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~svG~p~ 537 (718)
T PRK08043 475 --------P--------YDFARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMA-AKPGTVGRIL 537 (718)
T ss_pred --------c--------ccccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcc-cCCCCCCCcC
Confidence 0 0124899999999999999999999989999999999999988776554332 3458999999
Q ss_pred cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCC--hHh-------hhhh-ccCCccccCceEEEccCCeEEEE
Q 007257 394 VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKN--PDL-------TRES-IIDGWFHTGDIGQILPNGVVKII 463 (611)
Q Consensus 394 ~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~--~~~-------~~~~-~~~g~~~TGD~~~~~~dG~l~~~ 463 (611)
|++++++++ +++ .++.|||+++|++++.||+++ ++. +.+. +.+|||+|||+|++|+||++++.
T Consensus 538 pg~~~~i~d-~~~------~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~ 610 (718)
T PRK08043 538 PGMDARLLS-VPG------IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQ 610 (718)
T ss_pred CCCeeEEec-CCC------CCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEE
Confidence 999999998 433 134699999999999999983 442 2222 25799999999999999999999
Q ss_pred eccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCCC---eEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHH
Q 007257 464 DRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLKS---MLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQL 540 (611)
Q Consensus 464 GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~---~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (611)
||.||+|++ +|++|+|.+||+++.+|+.+.+++|++.++.. .++++++ .... +
T Consensus 611 GR~~d~I~~-~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~-~~~~------------------~---- 666 (718)
T PRK08043 611 GRAKRFAKI-AGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT-DSEL------------------T---- 666 (718)
T ss_pred ecCCCeeEe-CcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc-Cccc------------------C----
Confidence 999999997 89999999999999999988888888876553 5665543 1110 1
Q ss_pred HHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 541 QNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 541 ~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.+++.+++++..|+.|++|+.++++++. |+|++||++|++|++++.+
T Consensus 667 ----~~~l~~~~~~~~l~~~~vP~~i~~v~~l------P~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 667 ----REKLQQYAREHGVPELAVPRDIRYLKQL------PLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred ----HHHHHHHHHhcCCCcccCCceEEEeccc------CcCCCCCcCHHHHHHHHhc
Confidence 1235555554459999999999999765 9999999999999987644
No 62
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-62 Score=505.29 Aligned_cols=497 Identities=20% Similarity=0.233 Sum_probs=405.4
Q ss_pred CCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT 85 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~ 85 (611)
.+|.+++++. +..++....+||.|+.+++.++|..|.+.|+++||+|++++|+.+++++++|||.++|++.+++...
T Consensus 78 ~~~~~a~~~~---~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~ 154 (626)
T KOG1175|consen 78 GGDKVAIIFE---GNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAG 154 (626)
T ss_pred CCCCcEEEEE---ecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeecc
Confidence 5889999988 4444444559999999999999999998899999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhhcCccEEEEcchhHHHHhccc------------ccc-ccCccEEEEecCCcHHHHHHhhhCCCceeeHH
Q 007257 86 LGPGAVNFILDHAEIDFVFVQDKKVKELLSPD------------CRS-AQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 152 (611)
Q Consensus 86 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~------------~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (611)
+++.++..+|+.++|+++++.+.......... ... .+....+++... .....|+
T Consensus 155 fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-------------~~d~~~~ 221 (626)
T KOG1175|consen 155 FSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRR-------------NRDLFWS 221 (626)
T ss_pred CCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecc-------------cccccHH
Confidence 99999999999999999999875432211100 000 011111111111 1133555
Q ss_pred HHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHH-HhhhhcccccccccCCCCCCcEEEEecchhhHHH
Q 007257 153 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIA-TFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 231 (611)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 231 (611)
.+.... .+...+.+.+.+|+.+|+|||||||.||++.+++.... ..+......+ .++++|+++|...+.|+.+
T Consensus 222 ~~~~~a-~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~-----d~q~~dv~~~~~d~GWi~g 295 (626)
T KOG1175|consen 222 LELKKA-SPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF-----DLQPSDVLWCASDLGWITG 295 (626)
T ss_pred HHhhhc-CCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec-----cCCCcceEEEecccCeeec
Confidence 554444 33444778899999999999999999999999987654 4444444444 8999999999999999999
Q ss_pred HHH-HHHHhhcCceEEEecC---ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 007257 232 RVI-EEYFFRRGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 307 (611)
Q Consensus 232 ~~~-~~~~l~~G~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
.++ .+.+++.|+++++++. ++..+++.+.+|++|++++.|+.++.+.+...+..
T Consensus 296 ~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~---------------------- 353 (626)
T KOG1175|consen 296 HSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDV---------------------- 353 (626)
T ss_pred cchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccc----------------------
Confidence 988 5558999999999876 78999999999999999999999997754322211
Q ss_pred hhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCC-ceeeccccCCCCCceeeccCCC-ccc
Q 007257 308 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCFPDE-MCM 385 (611)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~~~~~~~-~~~ 385 (611)
...++ ++||.+.++|++++++...++.+.++. +|++.||+||+|+.+..+.... ...
T Consensus 354 -------------~~~~~--------~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~ 412 (626)
T KOG1175|consen 354 -------------TSYSL--------KSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIK 412 (626)
T ss_pred -------------ccccc--------ceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcC
Confidence 11111 389999999999999999999999987 7999999999999999999888 677
Q ss_pred cCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEec--C-CcccccCCChHhhhhhc---cCCccccCceEEEccCCe
Q 007257 386 VGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--K-TLFSGYYKNPDLTRESI---IDGWFHTGDIGQILPNGV 459 (611)
Q Consensus 386 ~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~--~-~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~dG~ 459 (611)
+++.+.|++++.+.|.| ++++..+... +.|+|+++. | +.+++|++|++....++ ..|+|.|||.+++|+||+
T Consensus 413 pg~~~~p~~g~~v~i~d-e~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY 490 (626)
T KOG1175|consen 413 PGSAGKPFPGYDVQILD-ENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGY 490 (626)
T ss_pred ccccCCCCCCcceEEEC-CCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCce
Confidence 79999999999999999 6665444433 789999987 3 77899999999666665 379999999999999999
Q ss_pred EEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhc
Q 007257 460 VKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCS 536 (611)
Q Consensus 460 l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~ 536 (611)
+++.||.||+|++ +|+++++.|||+++.+||.|.|++|||.+++ +.+.|||+++++.. +
T Consensus 491 ~~i~GR~DDviNv-sGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~-----------------~ 552 (626)
T KOG1175|consen 491 YWILGRVDDVINV-SGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSH-----------------D 552 (626)
T ss_pred EEEEecccccccc-cceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCC-----------------C
Confidence 9999999999997 9999999999999999999999999998876 59999999998631 2
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 537 LVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
. +.|.++|+.+++ ..+.++..|+.|.+++.. |+|.+||+.|++|++-...+
T Consensus 553 ~----~~L~kel~~~VR-~~igp~a~P~~I~~v~~L------PkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 553 P----EQLTKELVKHVR-SVIGPYAVPRLIVFVPGL------PKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred h----HHHHHHHHHHHH-hhcCcccccceeEecCCC------CccccchhHHHHHHHHhccC
Confidence 3 344445555554 789999999999999776 99999999999999987554
No 63
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=3.2e-61 Score=519.49 Aligned_cols=485 Identities=24% Similarity=0.319 Sum_probs=391.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+| ++|+++|+.+. ++ +.+||.||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 12 ~~-~~~~~~a~~~~---~~-----~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~ 82 (504)
T PRK07514 12 AF-ADRDAPFIETP---DG-----LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLP 82 (504)
T ss_pred Hh-hCCCCeEEEeC---CC-----CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEE
Confidence 35 78999999875 34 69999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..+++.++++++++++.....+...... .....++.++.... ..+.+..... ..
T Consensus 83 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~~~~~~~~~-~~ 146 (504)
T PRK07514 83 LNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAA--AGAPHVETLDADGT-------------GSLLEAAAAA-PD 146 (504)
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhc--cCCceEEEecCCCc-------------ccHHHhhhhc-Cc
Confidence 99999999999999999999999998766544222111 11222333332211 0111111111 11
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
........++++++++|||||||.||+|.++|.++...+......+ ++..+|++++..|++|..++.. .+.++.
T Consensus 147 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 221 (504)
T PRK07514 147 DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-----RFTPDDVLIHALPIFHTHGLFVATNVALL 221 (504)
T ss_pred ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCccEEEEecchHHHHHHHHHHHHHHh
Confidence 1122345688999999999999999999999999998877665555 6788999999999999999875 556789
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.+ .++|++.++|.++..+++...
T Consensus 222 ~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~------------------------------------- 262 (504)
T PRK07514 222 AGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPR------------------------------------- 262 (504)
T ss_pred cCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCC-------------------------------------
Confidence 9999998877 899999998 479999999999988764210
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEE
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR 399 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~ 399 (611)
... ..++++|.+++||+++++++.+.|.+.++.++++.||+||++......... ....+++|.|+++++++
T Consensus 263 ~~~--------~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~G~~~~~~~v~ 333 (504)
T PRK07514 263 LTR--------EAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPYDG-ERRAGTVGFPLPGVSLR 333 (504)
T ss_pred CCc--------ccccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCccc-cccCcccccCCCCcEEE
Confidence 000 112489999999999999999999998999999999999998665433322 23347899999999999
Q ss_pred EeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCceec
Q 007257 400 LEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYV 478 (611)
Q Consensus 400 i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v 478 (611)
+++ ++++ .+++.|+.|||+++|+.++.||+++++.+.+.| .+|||+|||+++++++|.+++.||.||+|++ +|.+|
T Consensus 334 i~d-~~~~-~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i 410 (504)
T PRK07514 334 VTD-PETG-AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIIS-GGYNV 410 (504)
T ss_pred EEE-CCCC-CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEe-CCeEE
Confidence 998 4443 567788899999999999999999999999988 5899999999999999999999999999996 99999
Q ss_pred CcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhC
Q 007257 479 ALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERN 555 (611)
Q Consensus 479 ~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (611)
+|.+||++|.++++|.+++|++.++. +.+++++++.++.. . + .+++.+.++ +
T Consensus 411 ~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~--------~--------~--------~~~l~~~~~-~ 465 (504)
T PRK07514 411 YPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAA--------L--------D--------EAAILAALK-G 465 (504)
T ss_pred CHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCC--------C--------C--------HHHHHHHHH-h
Confidence 99999999999999999999997754 36888888775320 0 1 123444443 6
Q ss_pred CCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 556 KLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 556 ~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
.|+.+++|..++++++. |+|++||++|++|+++|++.
T Consensus 466 ~l~~~~~p~~i~~v~~~------p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 466 RLARFKQPKRVFFVDEL------PRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred hcccCCCCcEEEEeccC------CCCCCcceeHHHHHHHHHhh
Confidence 78999999999998765 99999999999999888764
No 64
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-62 Score=538.25 Aligned_cols=502 Identities=18% Similarity=0.159 Sum_probs=377.5
Q ss_pred ccccCCCCCceeeeccccC---CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 2 SVQKYPGNRMLGWRPFVDG---KFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~---~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
+|+++||++|+++. +. ..+.++.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++
T Consensus 30 ~a~~~~~~~a~~~~---~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v 105 (631)
T PRK07769 30 WAKVRGDKLAYRFL---DFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGALYAGRI 105 (631)
T ss_pred HHHhCCCCeEEEEe---ccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHHHHcCCE
Confidence 46789999999875 31 234467999999999999999999987 899999999999999999999999999999
Q ss_pred EeeC-CCCCC--hhHHHHHHhhcCccEEEEcchhHHHHhccccccc-cCccEEEEecCCcHHHHHHhhhCCCceeeHHHH
Q 007257 79 CVPL-YDTLG--PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA-QRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEF 154 (611)
Q Consensus 79 ~~~l-~~~~~--~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (611)
++|+ ++..+ .+++.++++.++++++|++++....+........ .....++.++.... .
T Consensus 106 ~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~---- 167 (631)
T PRK07769 106 AVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPD--------------E---- 167 (631)
T ss_pred EEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcccccc--------------c----
Confidence 9999 55554 5789999999999999998875543322111000 01112332221100 0
Q ss_pred HhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH
Q 007257 155 LHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI 234 (611)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~ 234 (611)
. .......+..++++++++|||||||.||+|++||.++...+......+ ++..++++++.+|++|.+|+..
T Consensus 168 ---~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~Pl~h~~gl~~ 238 (631)
T PRK07769 168 ---V-GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-----EGQEGDRGVSWLPFFHDMGLIT 238 (631)
T ss_pred ---c-ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-----CCCCcceEEEeCCCcCchhhHH
Confidence 0 000111234678999999999999999999999999998777665555 6778999999999999999988
Q ss_pred HHHHhhcCceEEEecC-----ChHHHHHHHhhhcC---eEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 007257 235 EEYFFRRGASVGYYHG-----DLNALRDDLMELKP---TLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAW 306 (611)
Q Consensus 235 ~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~---t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
.+.+++.|++++++.. ++..+++.++++++ +++.++|.++..+...... .
T Consensus 239 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~-----~----------------- 296 (631)
T PRK07769 239 VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGL-----P----------------- 296 (631)
T ss_pred HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhcc-----c-----------------
Confidence 7778888999888742 78889999999886 7899999887766431000 0
Q ss_pred HhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc---CC---ceeeccccCCCCCceeeccC
Q 007257 307 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC---CA---FLVQGYGLTETCGPTTVCFP 380 (611)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~---~~---~v~~~yG~tE~g~~~~~~~~ 380 (611)
....... .++++|.+++||+++++++.++|.+.| |+ .+++.||+||++..++....
T Consensus 297 ----------~~~~~~~--------~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~ 358 (631)
T PRK07769 297 ----------KDGEPPL--------DLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPM 358 (631)
T ss_pred ----------hhcccCc--------chhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCC
Confidence 0000001 124899999999999999999999887 33 59999999999876554332
Q ss_pred CCc--------------------------cccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCCh
Q 007257 381 DEM--------------------------CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNP 434 (611)
Q Consensus 381 ~~~--------------------------~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 434 (611)
... ....++|.+.++.+++++| ++++ .+++.|+.|||+|+||+++.||++++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd-~~~g-~~~~~ge~GEl~v~gp~v~~GY~~~~ 436 (631)
T PRK07769 359 DEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVD-PETA-SELPDGQIGEIWLHGNNIGTGYWGKP 436 (631)
T ss_pred CCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEc-CCCC-cCCCCCCEEEEEecCCCccccccCCh
Confidence 110 0124789999999999998 3332 45677899999999999999999999
Q ss_pred Hhhhhhcc------------------CCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhc-CcCcce
Q 007257 435 DLTRESII------------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCV-APIIED 495 (611)
Q Consensus 435 ~~~~~~~~------------------~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~-~p~V~~ 495 (611)
+.+.+.|. +|||+|||+|+++ ||+|+++||.||+|++ +|++|+|.|||++|.+ ||.|.+
T Consensus 437 ~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~-~G~~V~p~eIE~~l~~~~p~v~~ 514 (631)
T PRK07769 437 EETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVII-DGRNHYPQDLEYTAQEATKALRT 514 (631)
T ss_pred hHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEE-CCeeeCHHHHHHHHHhccccccC
Confidence 99998884 3899999999995 9999999999999997 9999999999999986 899998
Q ss_pred --EEEEecCC----------------------CCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHH
Q 007257 496 --IWVYGDSL----------------------KSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNA 551 (611)
Q Consensus 496 --~~v~~~~~----------------------~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (611)
++|++.++ .+.++|+|++.++... .+..++.+.+.
T Consensus 515 ~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~---------------~~~~~l~~~~~------ 573 (631)
T PRK07769 515 GYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHK---------------LDPQPIADDIR------ 573 (631)
T ss_pred CcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCcccc---------------ccHHHHHHHHH------
Confidence 89998776 1368888887754200 01222333333
Q ss_pred HHhCCCCC-cc-eeeeEEEecCCCCCCCCccccccccchHHHHHHHHH-HHHHHHhhh
Q 007257 552 AERNKLRG-FE-HIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV-EIDQLYEKL 606 (611)
Q Consensus 552 ~~~~~l~~-~~-~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~-~~~~~y~~~ 606 (611)
+.|+. ++ .|+.+.+++. +++|+|++||++|++|++.|.+ .+..-|-++
T Consensus 574 ---~~l~~~~~~~p~~~~~v~~----~~lP~t~~GKi~r~~l~~~~~~~~~~~~~~~~ 624 (631)
T PRK07769 574 ---AAIAVRHGVTVRDVLLVPA----GSIPRTSSGKIARRACRAAYLDGSLRSGYGQP 624 (631)
T ss_pred ---HHHHHHcCCCccEEEEECC----CccccCCCcHHHHHHHHHHHHcCCCccccCCC
Confidence 33443 44 4777888853 2469999999999999998753 555555443
No 65
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.1e-61 Score=521.23 Aligned_cols=489 Identities=23% Similarity=0.259 Sum_probs=395.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+.+. + +++||+||.+++.++|.+|.+.|+.+|++|+++++|++++++++|||+++|++++|
T Consensus 9 ~~~~~p~~~a~~~~---~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 79 (515)
T TIGR03098 9 AAARLPDATALVHH---D------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVP 79 (515)
T ss_pred HHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEe
Confidence 46789999999876 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..+++.+++++++++......+...... .+....++.+++..... ........|+++......
T Consensus 80 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~- 152 (515)
T TIGR03098 80 INPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPG-CHDLRTLILVGEPAHAS-----EGGGESPSWPKLLALGDA- 152 (515)
T ss_pred CCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhc-ccccceEEEecCccccc-----CCccccccHHHhhccccc-
Confidence 99999999999999999999999988765544332222 13344455554332100 001223356655433221
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
....+...+++++++|||||||.||+|.+||.++...+......+ .+..+|++++.+|++|.+++...+.++..
T Consensus 153 -~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~l~~ 226 (515)
T TIGR03098 153 -DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-----ENRPDDRLLAVLPLSFDYGFNQLTTAFYV 226 (515)
T ss_pred -cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-----CCCcccEEEEECchhhHhHHHHHHHHHHc
Confidence 123344568899999999999999999999999998877766555 67889999999999999999888889999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++.+. ++..+++.++++++|++.++|+++..+.+....
T Consensus 227 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------------------- 269 (515)
T TIGR03098 227 GATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP------------------------------------- 269 (515)
T ss_pred CCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-------------------------------------
Confidence 999998876 899999999999999999999999887541000
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR 399 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~ 399 (611)
...++++|.++++|+++++++.+.+.+.+ ++.+++.||+||++..............+++|.++++++++
T Consensus 270 ---------~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 340 (515)
T TIGR03098 270 ---------ESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVL 340 (515)
T ss_pred ---------CCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEE
Confidence 01124899999999999999999999988 78899999999998765544333234458999999999999
Q ss_pred EeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc------------CCccccCceEEEccCCeEEEEeccC
Q 007257 400 LEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII------------DGWFHTGDIGQILPNGVVKIIDRKK 467 (611)
Q Consensus 400 i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~TGD~~~~~~dG~l~~~GR~~ 467 (611)
+++ +++ .+++.++.|||+++|+.++.||+++++.+.+.|. ++||+|||+|++++||++++.||.+
T Consensus 341 i~~-~~~--~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~ 417 (515)
T TIGR03098 341 VLR-EDG--SECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRD 417 (515)
T ss_pred EEC-CCC--CCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccc
Confidence 998 554 3456788999999999999999999988876652 3489999999999999999999999
Q ss_pred CeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHH
Q 007257 468 NLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYI 544 (611)
Q Consensus 468 d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
|+|++ +|.+|+|.+||++|.++|.|.+|+|++.++. +.+++++++..... . +
T Consensus 418 d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~--------~--------~-------- 472 (515)
T TIGR03098 418 EMIKT-SGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEE--------L--------D-------- 472 (515)
T ss_pred cceec-CCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCC--------C--------C--------
Confidence 99997 8999999999999999999999999997654 47788877543210 0 1
Q ss_pred HHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHH
Q 007257 545 LSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLI 593 (611)
Q Consensus 545 ~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~ 593 (611)
.+.+.++++ ++|+.+++|..++++++. |+|.+||++|++|++
T Consensus 473 ~~~l~~~l~-~~l~~~~~p~~i~~v~~i------P~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 473 RAALLAECR-ARLPNYMVPALIHVRQAL------PRNANGKIDRKALAA 514 (515)
T ss_pred HHHHHHHHH-hhCccccCCCEEEEeccC------CCCCCCCCcHHHhcc
Confidence 123444443 679999999999998765 999999999999864
No 66
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-61 Score=517.20 Aligned_cols=479 Identities=22% Similarity=0.281 Sum_probs=387.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +++||.||.+++.++|.+|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 11 ~~~~~~~~~a~~~~----~-----~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 11 HARRTPDRAALVYR----D-----QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred HHHHCCCceEEEEC----C-----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57889999999876 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.+++++++++++....... ....+.++..... .+..+.. ....
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~--------~~~~~~~~~~~~~-------------~~~~~~~-~~~~ 139 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL--------ETPKIVIDAAAQA-------------DSRRLAQ-GGLE 139 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhhc--------ccceEEecCcccc-------------hhHHHhc-cCCC
Confidence 9999999999999999999999998765432210 0112222211100 0111111 0011
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
........++++++++|||||||.||+|.++|.++..........+ ++..+++++...|++|.+++.. .+.++.
T Consensus 140 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 214 (497)
T PRK06145 140 IPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-----GLTASERLLVVGPLYHVGAFDLPGIAVLW 214 (497)
T ss_pred CCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCCCcEEEEecCchhHhHHHHHHHHHHh
Confidence 1112245678999999999999999999999999886655444433 6788999999999999998875 456788
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.++++++|++.++|+++..++......
T Consensus 215 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~----------------------------------- 259 (497)
T PRK06145 215 VGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRD----------------------------------- 259 (497)
T ss_pred ccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcc-----------------------------------
Confidence 9999988776 9999999999999999999999998876421100
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCC-CccccCccCCCccCee
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD-EMCMVGTAGPVSVYSE 397 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~-~~~~~~~~G~~~~~~~ 397 (611)
. ..++++|.+++||+++++++.+++.+.+ +.++++.||+||+++..+..... .....+++|.|+++++
T Consensus 260 --~--------~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 329 (497)
T PRK06145 260 --R--------FDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVE 329 (497)
T ss_pred --c--------cccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCce
Confidence 0 0114899999999999999999999888 68899999999999866544332 2234478999999999
Q ss_pred EEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCcee
Q 007257 398 LRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEY 477 (611)
Q Consensus 398 v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~ 477 (611)
+++.+ +++ ..++.++.|||+++|++++.||+++++.+.+.|.++||+|||+|++++||++++.||.||+|++ +|.+
T Consensus 330 ~~i~~-~~~--~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~-~G~~ 405 (497)
T PRK06145 330 IRIAD-GAG--RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMIIS-GGEN 405 (497)
T ss_pred EEEEC-CCC--CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcCCCcEEEeccccceEEe-CCeE
Confidence 99998 554 3556778999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (611)
++|.+||+.|.++|+|.+++|++.++. +.+.+++++.+.. .. . .++|.++++
T Consensus 406 v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~--------~--------~~~l~~~~~- 460 (497)
T PRK06145 406 IASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGA--------TL--------T--------LEALDRHCR- 460 (497)
T ss_pred ECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCC--------CC--------C--------HHHHHHHHH-
Confidence 999999999999999999999997755 4788888876532 00 1 123444443
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
+.|+.+++|..+.++++. |+|++||++|++|++++.
T Consensus 461 ~~l~~~~~p~~i~~v~~i------P~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 461 QRLASFKVPRQLKVRDEL------PRNPSGKVLKRVLRDELN 496 (497)
T ss_pred HhhhcCCCCCEEEEeccC------CCCCcccccHHHHHHHhc
Confidence 678999999999998665 999999999999998753
No 67
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.2e-61 Score=525.11 Aligned_cols=496 Identities=26% Similarity=0.342 Sum_probs=394.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++|+++|+++. ++. +.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 27 ~~~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~ 99 (558)
T PRK12583 27 TVARFPDREALVVR---HQA----LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVN 99 (558)
T ss_pred HHHHCCCCeEEEec---CCC----cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEe
Confidence 46789999999875 221 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHH-----HHh---ccc---------cccccCccEEEEecCCcHHHHHHhhhC
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVK-----ELL---SPD---------CRSAQRLRVMVCFTSLTAEQKEMAVQT 144 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~-----~~~---~~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~ 144 (611)
+++.++.+++.+++++++++++++++.... .+. ... ....+....++.......
T Consensus 100 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 170 (558)
T PRK12583 100 INPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPP--------- 170 (558)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCC---------
Confidence 999999999999999999999999764321 110 000 001122233333332211
Q ss_pred CCceeeHHHHHhccccc-----CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcE
Q 007257 145 GIKPYSWDEFLHLGKVN-----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDV 219 (611)
Q Consensus 145 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 219 (611)
.....|+++....... ........++++++++|||||||.||+|.++|.++...+......+ ++..+|+
T Consensus 171 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~ 244 (558)
T PRK12583 171 -PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL-----GLTEHDR 244 (558)
T ss_pred -ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh-----CCCCCCe
Confidence 1223444443322110 0111234578899999999999999999999999988877766555 7788999
Q ss_pred EEEecchhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHH
Q 007257 220 YLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIF 296 (611)
Q Consensus 220 ~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (611)
+++..|++|.+|... .+.++..|+++++... ++..+++.++++++|+++++|+++..+......
T Consensus 245 ~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~------------- 311 (558)
T PRK12583 245 LCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQR------------- 311 (558)
T ss_pred EEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccc-------------
Confidence 999999999999876 5556888998887643 899999999999999999999998766532110
Q ss_pred HHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC-CceeeccccCCCCCce
Q 007257 297 DALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPT 375 (611)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~yG~tE~g~~~ 375 (611)
.. ..++++|.+++||++++++..+++.+.++ ..+++.||+||++.++
T Consensus 312 ------------------------~~--------~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~ 359 (558)
T PRK12583 312 ------------------------GN--------FDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVS 359 (558)
T ss_pred ------------------------cC--------CCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccce
Confidence 00 01148999999999999999999988885 5799999999999887
Q ss_pred eeccCCC--ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceE
Q 007257 376 TVCFPDE--MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIG 452 (611)
Q Consensus 376 ~~~~~~~--~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~ 452 (611)
..+.... .....++|.|++++.+++++ +++ .+++.++.|||+++|+.++.||+++++.+...| .+|||+|||+|
T Consensus 360 ~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~ 436 (558)
T PRK12583 360 LQTTAADDLERRVETVGRTQPHLEVKVVD-PDG--ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLA 436 (558)
T ss_pred eccCcccccccccCCCCccCCCCeEEEEC-CCC--CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceE
Confidence 7654322 23457899999999999998 553 566778899999999999999999999998888 78999999999
Q ss_pred EEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCC
Q 007257 453 QILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAG 529 (611)
Q Consensus 453 ~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~ 529 (611)
++++||++++.||.+|+|++ +|.+|+|.+||++|.++|+|.+++|++.++. +.+++++++.++.. .
T Consensus 437 ~~~~dg~l~i~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~-- 505 (558)
T PRK12583 437 TMDEQGYVRIVGRSKDMIIR-GGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHA--------A-- 505 (558)
T ss_pred EECCCccEEEEecccceeEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCC--------C--
Confidence 99999999999999999996 9999999999999999999999999997654 47888888765320 0
Q ss_pred cHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 530 SFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
+ .++++++++ ++|+.+++|..++++++. |+|++||++|++|++++.+++
T Consensus 506 ------~--------~~~i~~~~~-~~L~~~~~P~~i~~v~~l------P~t~sGK~~r~~L~~~~~~~~ 554 (558)
T PRK12583 506 ------S--------EEELREFCK-ARIAHFKVPRYFRFVDEF------PMTVTGKVQKFRMREISIEEL 554 (558)
T ss_pred ------C--------HHHHHHHHH-hhcccCcCCcEEEEeccC------CCCCCCCccHHHHHHHHHhhc
Confidence 1 123445544 679999999999998765 999999999999999886654
No 68
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=6.2e-61 Score=519.89 Aligned_cols=486 Identities=19% Similarity=0.206 Sum_probs=388.1
Q ss_pred CCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTL 86 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~ 86 (611)
||++|+++. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++++.+..
T Consensus 37 p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~ 107 (536)
T PRK10946 37 SDAIAVICG---E------RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSH 107 (536)
T ss_pred CCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCccc
Confidence 999999976 2 6899999999999999999999999999999999999999999999999999888777777
Q ss_pred ChhHHHHHHhhcCccEEEEcchhH----HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccC
Q 007257 87 GPGAVNFILDHAEIDFVFVQDKKV----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNE 162 (611)
Q Consensus 87 ~~~~l~~~l~~~~~~~li~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (611)
...++..+++.++++++++++... ...........+....++...... ...+.++..... ..
T Consensus 108 ~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~ 173 (536)
T PRK10946 108 QRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDG-------------EHSLDDAINHPA-ED 173 (536)
T ss_pred cHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCC-------------CccHHHHhhCcc-cc
Confidence 788899999999999999986431 111111111223334444332211 122333332221 11
Q ss_pred CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH--HHHHhh
Q 007257 163 MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI--EEYFFR 240 (611)
Q Consensus 163 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~--~~~~l~ 240 (611)
....+..++++++++|||||||.||+|+++|.++...+......+ ++..++++++.+|++|.+++.. .+.++.
T Consensus 174 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~ 248 (536)
T PRK10946 174 FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----GFTPQTRYLCALPAAHNYPMSSPGALGVFL 248 (536)
T ss_pred cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCceEEEecCccccccchhhhHHHHhh
Confidence 123345688999999999999999999999999999888766655 6788999999999999888764 566788
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.++++++|++.++|.++..+++.......
T Consensus 249 ~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~--------------------------------- 295 (536)
T PRK10946 249 AGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGS--------------------------------- 295 (536)
T ss_pred cCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCc---------------------------------
Confidence 9999988765 889999999999999999999999988764211100
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCc-cCeeE
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS-VYSEL 398 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~-~~~~v 398 (611)
...+++++.+++||+++++++.+.+.+.+|+++++.||+||++..............+++|.|+ ++..+
T Consensus 296 ----------~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v 365 (536)
T PRK10946 296 ----------RAQLASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEV 365 (536)
T ss_pred ----------cccccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccccccCCcccCCCceE
Confidence 0111489999999999999999999998999999999999976443322222223347889998 78999
Q ss_pred EEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCcee
Q 007257 399 RLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEY 477 (611)
Q Consensus 399 ~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~ 477 (611)
++.+ +++ .+++.|+.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++|++|++++.||.+|++++ +|.+
T Consensus 366 ~i~d-~~~--~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~-~G~~ 441 (536)
T PRK10946 366 WVAD-ADG--NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINR-GGEK 441 (536)
T ss_pred EEEC-CCC--CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeec-CCEE
Confidence 9988 544 456788999999999999999999999999988 6899999999999999999999999999996 9999
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAER 554 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 554 (611)
++|.+||+.|.++|+|.+++|++.++. +.+++++++.+.. +. .++.+++++
T Consensus 442 v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~~------------------~~--------~~l~~~~~~ 495 (536)
T PRK10946 442 IAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEPL------------------KA--------VQLRRFLRE 495 (536)
T ss_pred EcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCCC------------------CH--------HHHHHHHHh
Confidence 999999999999999999999997755 3678888876532 21 234444443
Q ss_pred CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 555 NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 555 ~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
..++.|++|..+.++++. |+|++||++|++|+++++...
T Consensus 496 ~~l~~~~~P~~~~~~~~i------P~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 496 QGIAEFKLPDRVECVDSL------PLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred CCccccccCcEEEEeccC------CCCCCCcccHHHHHHHHHhhc
Confidence 459999999999998765 999999999999999876643
No 69
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-61 Score=520.78 Aligned_cols=487 Identities=23% Similarity=0.252 Sum_probs=393.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++|+++|+++. + +.+||.||.+++.++|..|.+.|+++|++|+++++|++++++++|||+++|+++++
T Consensus 21 ~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~ 91 (524)
T PRK06188 21 ALKRYPDRPALVLG---D------TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTA 91 (524)
T ss_pred HHHHCCCCeEEEEC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEe
Confidence 56789999999876 3 69999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchh-HHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKK-VKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
++|..+.+++..+++.++++++++++.. ...... ..........++.+...... ....+..... .
T Consensus 92 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-~ 157 (524)
T PRK06188 92 LHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALA-LLARVPSLKHVLTLGPVPDG------------VDLLAAAAKF-G 157 (524)
T ss_pred cccCCCHHHHHHHHHhcCceEEEEecchhhHHHHH-HhhhcCCceEEEEeCCccch------------hhHHHhhhcc-C
Confidence 9999999999999999999999998763 222211 11122333444444432210 0000000000 0
Q ss_pred cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhh
Q 007257 161 NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFR 240 (611)
Q Consensus 161 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~ 240 (611)
.........++++++++|||||||.||+|.++|.++...+......+ ++..++++++..|++|.+++. .+.+++
T Consensus 158 ~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~~g~~-~~~~l~ 231 (524)
T PRK06188 158 PAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-----EWPADPRFLMCTPLSHAGGAF-FLPTLL 231 (524)
T ss_pred cccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCcEEEEecCchhhhhHH-HHHHHH
Confidence 01111123456799999999999999999999999998888766665 778899999999999988864 456788
Q ss_pred cCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 007257 241 RGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPL 319 (611)
Q Consensus 241 ~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (611)
.|+++++.+. ++..+++.++++++|+++++|+++..+++.....
T Consensus 232 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~----------------------------------- 276 (524)
T PRK06188 232 RGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLR----------------------------------- 276 (524)
T ss_pred cCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCcc-----------------------------------
Confidence 9999999887 8999999999999999999999998876521110
Q ss_pred HHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC-----ccccCccCCCcc
Q 007257 320 ADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-----MCMVGTAGPVSV 394 (611)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~-----~~~~~~~G~~~~ 394 (611)
...++++|.+++||++++++....+.+.++..+++.||+||++..+....... .....++|.|++
T Consensus 277 ----------~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~ 346 (524)
T PRK06188 277 ----------TRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTP 346 (524)
T ss_pred ----------CCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchhccccccccCCccccccC
Confidence 01124899999999999999888888888999999999999977666543321 234478999999
Q ss_pred CeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCC
Q 007257 395 YSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQ 474 (611)
Q Consensus 395 ~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~ 474 (611)
++++++++ +++ .+++.|+.|||+++|+.++.||+++++.+...|.+|||+|||+|++++||.+++.||.+|++++ +
T Consensus 347 g~~v~i~~-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~ 422 (524)
T PRK06188 347 GLRVALLD-EDG--REVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVDRKKDMIVT-G 422 (524)
T ss_pred CcEEEEEc-CCC--CCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcCCccEEEEeccccceec-C
Confidence 99999998 554 4566788999999999999999999999999999999999999999999999999999999997 9
Q ss_pred ceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHH
Q 007257 475 GEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNA 551 (611)
Q Consensus 475 G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (611)
|++|+|.+||++|.++|+|.+++|++.++. +.+.+++++++.... . .++|.++
T Consensus 423 G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----------------~--------~~~l~~~ 478 (524)
T PRK06188 423 GFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAV----------------D--------AAELQAH 478 (524)
T ss_pred CEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCC----------------C--------HHHHHHH
Confidence 999999999999999999999999997654 478888887753200 1 1234444
Q ss_pred HHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 552 AERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 552 ~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
++ ..++.+++|..++++++. |+|++||++|++|+++|.+
T Consensus 479 ~~-~~l~~~~~p~~i~~v~~~------P~t~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 479 VK-ERKGSVHAPKQVDFVDSL------PLTALGKPDKKALRARYWE 517 (524)
T ss_pred HH-HhcccCCCCcEEEEecCC------CCCccccccHHHHHHHHHh
Confidence 43 678999999999999765 9999999999999999854
No 70
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-61 Score=515.28 Aligned_cols=471 Identities=23% Similarity=0.269 Sum_probs=378.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+.+||++|+.+.. ++ +.+||.||.+++.++|.+|.+.|+.+||+|+++++|++++++++|||+++|++++|
T Consensus 4 ~a~~~p~~~a~~~~~--~~-----~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 76 (488)
T PRK09088 4 HARLQPQRLAAVDLA--LG-----RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVP 76 (488)
T ss_pred hhhhCCCceEEEecC--CC-----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEe
Confidence 578899999998631 22 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccc-c
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGK-V 160 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 160 (611)
+++.++.+++.+++++++++++++++....... . ...++.+..... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~---------------------~~~~~~~~~~~~~~ 124 (488)
T PRK09088 77 LNWRLSASELDALLQDAEPRLLLGDDAVAAGRT-----------D---------------------VEDLAAFIASADAL 124 (488)
T ss_pred eCccCCHHHHHHHHHhCCCCEEEEcchhhcccc-----------c---------------------ccchhhhhhhcccc
Confidence 999999999999999999999999765332100 0 001111111110 0
Q ss_pred cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHh
Q 007257 161 NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFF 239 (611)
Q Consensus 161 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l 239 (611)
.........++++++++|||||||.||+|.++|+++...+..+.... .+..++++++.+|++|.+++.. +..++
T Consensus 125 ~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~g~~~~~~~~l 199 (488)
T PRK09088 125 EPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLG-----RVDAHSSFLCDAPMFHIIGLITSVRPVL 199 (488)
T ss_pred ccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEecchHHHHHHHHHHHHHH
Confidence 11112234568899999999999999999999999987766655444 5778999999999999999876 44568
Q ss_pred hcCceEEEecC-ChHHHHHHHh--hhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 240 RRGASVGYYHG-DLNALRDDLM--ELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 240 ~~G~~~~~~~~-~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
..|+++++.+. ++..++..+. ++++|+++++|.++..+.....
T Consensus 200 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~---------------------------------- 245 (488)
T PRK09088 200 AVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPG---------------------------------- 245 (488)
T ss_pred hcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcC----------------------------------
Confidence 88999888766 7888888876 4899999999999987754110
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC--CccccCccCCCcc
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD--EMCMVGTAGPVSV 394 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~--~~~~~~~~G~~~~ 394 (611)
.+. ..+++++.+++||++++....+.+.+. |+++++.||+||++++....... .....+++|.+.+
T Consensus 246 ---~~~--------~~~~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~ 313 (488)
T PRK09088 246 ---FDA--------AALRHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTP 313 (488)
T ss_pred ---cCc--------cccccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccccccccccCCCcccccccCCccccCCC
Confidence 000 011489999999999999988887765 89999999999999765432211 1224478999999
Q ss_pred CeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcC
Q 007257 395 YSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKIS 473 (611)
Q Consensus 395 ~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~ 473 (611)
++++++++ +++ .+++.++.|||+|+|++++.||+++++.+.+.| .+|||+|||+|+++++|.+++.||.+|+|++
T Consensus 314 ~~~~~i~d-~~~--~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~- 389 (488)
T PRK09088 314 TVQTRVVD-DQG--NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFIS- 389 (488)
T ss_pred CcEEEEEC-CCC--CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEe-
Confidence 99999998 554 345677899999999999999999999998888 5899999999999999999999999999996
Q ss_pred CceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHH
Q 007257 474 QGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKN 550 (611)
Q Consensus 474 ~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (611)
+|.+++|.+||++|+++|+|.+++|++.++. +..+++++++++.. . + .+++.+
T Consensus 390 ~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--------~--------~--------~~~l~~ 445 (488)
T PRK09088 390 GGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAP--------L--------D--------LERIRS 445 (488)
T ss_pred CCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCC--------C--------C--------HHHHHH
Confidence 9999999999999999999999999997754 46778888765320 0 1 123444
Q ss_pred HHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 551 AAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 551 ~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+++ ..++.+++|..+.++++. |+|++||++|++|++++.+
T Consensus 446 ~~~-~~l~~~~~p~~i~~~~~i------P~t~~gKi~r~~l~~~~~~ 485 (488)
T PRK09088 446 HLS-TRLAKYKVPKHLRLVDAL------PRTASGKLQKARLRDALAA 485 (488)
T ss_pred HHH-hhCcCCCCCCEEEEcccC------CCCCCCceeHHHHHHHHHh
Confidence 444 678999999999998765 9999999999999998865
No 71
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-61 Score=524.17 Aligned_cols=501 Identities=23% Similarity=0.293 Sum_probs=385.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+++++|+++|+++. + +.+||.||.++++++|.+|.+. |+++||+|+++++|++++++++|||+++|++++
T Consensus 33 ~~~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 33 SCKKFADRPAFSNL----G-----VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred HHHhCCCCeeEecC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 46779999998865 3 6899999999999999999985 999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEec--CCcHHHHHH-------------hhhCC
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFT--SLTAEQKEM-------------AVQTG 145 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~-------------~~~~~ 145 (611)
++++.++.+++.+++++++++++++++............ .....++... +........ .....
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPD--TGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHL 181 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhc--cCceEEEeechhhccccccchhcccccccccccccccCC
Confidence 999999999999999999999999987544333221111 0111111110 000000000 00000
Q ss_pred CceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccC----CCCC-CcEE
Q 007257 146 IKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFED----KMTV-DDVY 220 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~----~~~~-~~~~ 220 (611)
....+|+++............+...+++++++|||||||.||+|+++|+++...+......+..... .... .+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (562)
T PRK12492 182 PQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVM 261 (562)
T ss_pred cccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEE
Confidence 1223556555433222222334567899999999999999999999999998776654443311100 0222 3577
Q ss_pred EEecchhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHH
Q 007257 221 LSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 297 (611)
Q Consensus 221 l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (611)
++.+|++|.+++.. ++..+..|++.++... ++..++..++++++|++.++|+++..+.+...
T Consensus 262 ~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--------------- 326 (562)
T PRK12492 262 IAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPG--------------- 326 (562)
T ss_pred EEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcC---------------
Confidence 89999999999876 4445777887766542 88999999999999999999999988764211
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceee
Q 007257 298 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTV 377 (611)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~ 377 (611)
... ..++++|.+++||+++++.+.+.|.+.+++++++.||+||++++++.
T Consensus 327 ----------------------~~~--------~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 376 (562)
T PRK12492 327 ----------------------FKD--------LDFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVAST 376 (562)
T ss_pred ----------------------ccc--------ccccceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeee
Confidence 000 11248999999999999999999998889999999999999987776
Q ss_pred ccCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEcc
Q 007257 378 CFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILP 456 (611)
Q Consensus 378 ~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~ 456 (611)
+........+++|.|++++++++++ +++ .+++.++.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++++
T Consensus 377 ~~~~~~~~~~~~G~p~~~~~v~ivd-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~ 453 (562)
T PRK12492 377 NPYGELARLGTVGIPVPGTALKVID-DDG--NELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP 453 (562)
T ss_pred cCCcccccCCccceecCCCEEEEEC-CCC--CCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC
Confidence 5544444457899999999999998 554 456678899999999999999999999999888 689999999999999
Q ss_pred CCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHH
Q 007257 457 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLE 533 (611)
Q Consensus 457 dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~ 533 (611)
+|.+++.||.+|+|++ +|++|+|.+||+.|.+||.|.+++|++.++. +.+.+++++.+...
T Consensus 454 ~G~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------------- 517 (562)
T PRK12492 454 DGFVRIVDRKKDLIIV-SGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGL--------------- 517 (562)
T ss_pred CCeEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCC---------------
Confidence 9999999999999997 8999999999999999999999999997654 36778877654210
Q ss_pred HhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 534 LCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 534 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
+ .++++++++ +.|+.|++|..+.++++. |+|++||++|++|++.
T Consensus 518 --~--------~~~i~~~~~-~~l~~~~~P~~i~~~~~~------P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 518 --S--------VEELKAYCK-ENFTGYKVPKHIVLRDSL------PMTPVGKILRRELRDI 561 (562)
T ss_pred --C--------HHHHHHHHH-HhcccccCCcEEEEeccC------CCCCCCceeHHHHHhh
Confidence 1 123444544 679999999999998765 9999999999999864
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.2e-61 Score=567.98 Aligned_cols=494 Identities=23% Similarity=0.245 Sum_probs=394.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. ++ +++||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|++++|
T Consensus 624 ~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~ 694 (1146)
T PRK08633 624 TAKRNWSRLAVADS---TG-----GELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVPVN 694 (1146)
T ss_pred HHHhcCCCcEEEcC---CC-----CcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEE
Confidence 47889999999865 33 589999999999999999987 5899999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhcccc-ccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC-RSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
++|..+.+++.+++++++++++++++...+.+..... ...+....++..++.... ......+.+.......
T Consensus 695 l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 766 (1146)
T PRK08633 695 LNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAK--------ISKVDKLTALLAARLL 766 (1146)
T ss_pred eCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccc--------cchhHHHHHHHHhccC
Confidence 9999999999999999999999999876665432110 011223344444332110 0000111111111000
Q ss_pred c-----CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-
Q 007257 161 N-----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI- 234 (611)
Q Consensus 161 ~-----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~- 234 (611)
+ ........++++++++|||||||.||+|.+||+++...+......+ +...+|++++.+|++|.+++..
T Consensus 767 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~~ 841 (1146)
T PRK08633 767 PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-----NLRNDDVILSSLPFFHSFGLTVT 841 (1146)
T ss_pred CHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-----CCCCCCEEEEcCcHHHHHhHHHH
Confidence 0 0001345679999999999999999999999999998887766655 6788999999999999999876
Q ss_pred HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCC
Q 007257 235 EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYK 312 (611)
Q Consensus 235 ~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (611)
.+.++..|+++++.+. ++..+++.++++++|++.++|++++.+.+....
T Consensus 842 ~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----------------------------- 892 (1146)
T PRK08633 842 LWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKL----------------------------- 892 (1146)
T ss_pred HHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhcccc-----------------------------
Confidence 6677899999988764 889999999999999999999999887652110
Q ss_pred CCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC---------c
Q 007257 313 QREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE---------M 383 (611)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~---------~ 383 (611)
....++++|.+++||+++++++.+.+++.+|+++++.||+||++++++...++. .
T Consensus 893 ----------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~ 956 (1146)
T PRK08633 893 ----------------HPLMFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFKRQTG 956 (1146)
T ss_pred ----------------CcccCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecCcccccccccccC
Confidence 011125899999999999999999999999999999999999998776553321 1
Q ss_pred cccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccC----CccccCceEEEccCCe
Q 007257 384 CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID----GWFHTGDIGQILPNGV 459 (611)
Q Consensus 384 ~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~----g~~~TGD~~~~~~dG~ 459 (611)
...+++|.|+|+++++++| ++++ .+++.|+.|||+++|++++.||+++++.+.+.+.+ |||+|||+|++|+||+
T Consensus 957 ~~~~~vG~p~~~~~v~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~ 1034 (1146)
T PRK08633 957 SKEGSVGMPLPGVAVRIVD-PETF-EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGF 1034 (1146)
T ss_pred CCCCCccccCCCCEEEEEc-CCCC-ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCce
Confidence 2357899999999999998 4433 56678899999999999999999999999998876 9999999999999999
Q ss_pred EEEEeccCCeEEcCCceecCcHHHHHHHhcCc--CcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHH
Q 007257 460 VKIIDRKKNLIKISQGEYVALEYLENVYCVAP--IIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLEL 534 (611)
Q Consensus 460 l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p--~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~ 534 (611)
+++.||.||+|++ +|++|+|.+||++|.+|| .+.+++|++.+++ +.+++++++...
T Consensus 1035 l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~~------------------ 1095 (1146)
T PRK08633 1035 LTITDRYSRFAKI-GGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGAE------------------ 1095 (1146)
T ss_pred EEEEecccchhhh-CcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCcc------------------
Confidence 9999999999996 999999999999999999 4678999987765 378888776321
Q ss_pred hccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 535 CSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 535 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
+. +++++.++++.+|.|++|..++++++. |+|++||++|++|++..++.
T Consensus 1096 -~~--------~~l~~~~~~~~l~~~~~P~~i~~~~~i------P~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1096 -DV--------EELKRAIKESGLPNLWKPSRYFKVEAL------PLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred -CH--------HHHHHHHHhcCCCcccCCcEEEEecCc------CCCCCCCCcHHHHHHHHHHh
Confidence 11 233344434679999999999998765 99999999999999876553
No 73
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.8e-61 Score=521.01 Aligned_cols=475 Identities=18% Similarity=0.185 Sum_probs=354.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. +++.++++||+||.++++++|++|.+. ++||+|+++++|++++++++|||+++|++++
T Consensus 11 ~~~~~~~~~a~~~~-----~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~- 82 (525)
T PRK05851 11 AMTASGRDLVVLDR-----ESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS- 82 (525)
T ss_pred HhcCCCCceEEeCC-----CCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-
Confidence 57789999999876 334589999999999999999999988 7999999999999999999999999999865
Q ss_pred CCCCC--------ChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHH
Q 007257 82 LYDTL--------GPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDE 153 (611)
Q Consensus 82 l~~~~--------~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (611)
+++.. ..+++.+++..++++++|+++.....+..... . +.+.+. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~----~~~~~~------------------~~ 136 (525)
T PRK05851 83 ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS----S----VTVHDL------------------AT 136 (525)
T ss_pred CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc----c----cccccc------------------cc
Confidence 33322 23455667899999999998765543322110 0 000000 00
Q ss_pred HHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCC-CCcEEEEecchhhHHHH
Q 007257 154 FLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT-VDDVYLSFLPLAHILDR 232 (611)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~p~~~~~g~ 232 (611)
.... ..........++++++++|||||||.||+|+++|.++...+......+ ++. .+|++++.+|++|.+++
T Consensus 137 ~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~d~~l~~~pl~h~~g~ 209 (525)
T PRK05851 137 AAHT--NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-----GLDAATDVGCSWLPLYHDMGL 209 (525)
T ss_pred cccc--cccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCCCCeEEEcCCCccCccH
Confidence 0000 000111234678999999999999999999999999998887766655 677 88999999999999999
Q ss_pred HHHHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 007257 233 VIEEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 307 (611)
Q Consensus 233 ~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
...+.+++.|+++++.+. ++..+++.++++++|++...|.++..+.......
T Consensus 210 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~----------------------- 266 (525)
T PRK05851 210 AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRV----------------------- 266 (525)
T ss_pred HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccc-----------------------
Confidence 877888999999998762 5778999999999998755444444432211000
Q ss_pred hhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHH---cCC---ceeeccccCCCCCceeeccCC
Q 007257 308 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVT---CCA---FLVQGYGLTETCGPTTVCFPD 381 (611)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~---~~~---~v~~~yG~tE~g~~~~~~~~~ 381 (611)
.. ..+++||.+++||+++++++.++|.+. +|. .+++.||+||++..+....+.
T Consensus 267 -------------~~--------~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~ 325 (525)
T PRK05851 267 -------------SD--------VDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPG 325 (525)
T ss_pred -------------cC--------CCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCC
Confidence 00 011489999999999999999988764 454 499999999998766543321
Q ss_pred C--------------ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccc
Q 007257 382 E--------------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFH 447 (611)
Q Consensus 382 ~--------------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~ 447 (611)
. ....+++|+|+++++++|+| +++. .+++.++.|||+++|++++.||+++++.+ .+|||+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~-~~~~~g~~GEl~v~g~~~~~GY~~~~~~~----~~~~~~ 399 (525)
T PRK05851 326 IGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISP-GDGA-AGVAGREIGEIEIRGASMMSGYLGQAPID----PDDWFP 399 (525)
T ss_pred CCceeeeeccccCcccceeeeecCCCCCcEEEEEC-CCCC-ccCCCCCeEEEEEecCchhhccccCCccC----CCCcee
Confidence 1 12336799999999999998 4443 44667889999999999999999998643 378999
Q ss_pred cCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCCC---eEEEEEecChHHHHHHHHH
Q 007257 448 TGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLKS---MLVAVVVPCEEDTKKWAYS 524 (611)
Q Consensus 448 TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~---~~~a~vv~~~~~~~~~~~~ 524 (611)
|||+|+++ +|.++++||.||+|++ +|++|+|.+||++|.+||+|.+|+|++.++.. .+.++|+.....
T Consensus 400 TGDl~~~~-~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~------- 470 (525)
T PRK05851 400 TGDLGYLV-DGGLVVCGRAKELITV-AGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRG------- 470 (525)
T ss_pred ccceEEEE-CCEEEEEeecCCEEEE-CCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecC-------
Confidence 99999996 8999999999999997 99999999999999999999999999865442 455555433110
Q ss_pred CCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 525 NGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
. +..++.+.+.+.+... + +++|+.+++++. +.+|+|++||++|++|++.+++
T Consensus 471 --~--------~~~~~~~~~~~~l~~~-----l--~~~P~~~~~v~~----~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 471 --P--------DEAGARSEVVQRVASE-----C--GVVPSDVVFVAP----GSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred --c--------chHHHHHHHHHHHHHH-----h--CCCccEEEEECC----CCcCcCcchHHHHHHHHHHHHh
Confidence 0 1122333333333222 2 278889999862 1359999999999999988754
No 74
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.1e-60 Score=519.62 Aligned_cols=497 Identities=27% Similarity=0.345 Sum_probs=394.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.++++||++|+++. ++. +.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 25 ~~~~~~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~ 97 (559)
T PRK08315 25 TAARYPDREALVYR---DQG----LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVT 97 (559)
T ss_pred HHHHCCCCeEEEEc---CCC----eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEe
Confidence 46789999999886 321 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHH-----HHh---ccc---------cccccCccEEEEecCCcHHHHHHhhhC
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVK-----ELL---SPD---------CRSAQRLRVMVCFTSLTAEQKEMAVQT 144 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~-----~~~---~~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~ 144 (611)
++|..+.+++..+++.++++++++++.... .+. ... ....+..+.++......
T Consensus 98 l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 167 (559)
T PRK08315 98 INPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK---------- 167 (559)
T ss_pred cCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC----------
Confidence 999999999999999999999999875321 110 000 00012223344333211
Q ss_pred CCceeeHHHHHhccccc-----CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcE
Q 007257 145 GIKPYSWDEFLHLGKVN-----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDV 219 (611)
Q Consensus 145 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 219 (611)
......|.++....... ........++++++++|||||||.||+|.++|.++...+......+ ++..+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~ 242 (559)
T PRK08315 168 HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM-----KLTEEDR 242 (559)
T ss_pred CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc-----CCCCCce
Confidence 11123444443322110 1112234578899999999999999999999999988877766655 7889999
Q ss_pred EEEecchhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHH
Q 007257 220 YLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIF 296 (611)
Q Consensus 220 ~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (611)
++...|++|.+++.. .+.++..|+++++... ++..+++.++++++|+++++|+++..+......
T Consensus 243 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~------------- 309 (559)
T PRK08315 243 LCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDF------------- 309 (559)
T ss_pred EEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCccc-------------
Confidence 999999999999876 5567888999885543 899999999999999999999998776542110
Q ss_pred HHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCc-eeeccccCCCCCce
Q 007257 297 DALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAF-LVQGYGLTETCGPT 375 (611)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~-v~~~yG~tE~g~~~ 375 (611)
+.. .++++|.+++||+++++++.+.+.+.++.+ +++.||+||++.++
T Consensus 310 ------------------------~~~--------~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~ 357 (559)
T PRK08315 310 ------------------------ARF--------DLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVS 357 (559)
T ss_pred ------------------------CCC--------CchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccce
Confidence 001 114899999999999999999999888654 99999999999876
Q ss_pred eeccCCC--ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceE
Q 007257 376 TVCFPDE--MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIG 452 (611)
Q Consensus 376 ~~~~~~~--~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~ 452 (611)
+...... .....++|.|+++++++++| ++.+ .+++.|+.|||+|+|+.++.||+++++.+...| .++||+|||+|
T Consensus 358 ~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~-~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~ 435 (559)
T PRK08315 358 TQTRTDDPLEKRVTTVGRALPHLEVKIVD-PETG-ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLA 435 (559)
T ss_pred eecCcccchhhccCCCCccCCCcEEEEEc-CccC-CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceE
Confidence 6554332 23357899999999999998 4422 456778899999999999999999999999888 78999999999
Q ss_pred EEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCC
Q 007257 453 QILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAG 529 (611)
Q Consensus 453 ~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~ 529 (611)
++++||.+++.||.+|++++ +|.+|++.+||++|.++|+|.+++|++.++. +.++++|++..+.. .
T Consensus 436 ~~~~dg~~~~~GR~d~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~-- 504 (559)
T PRK08315 436 VMDEEGYVNIVGRIKDMIIR-GGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGAT--------L-- 504 (559)
T ss_pred EEcCCceEEEEeeccceEEE-CCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCC--------C--
Confidence 99999999999999999996 8999999999999999999999999997755 36788888765320 0
Q ss_pred cHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 530 SFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
+ .+.+.++++ +.||.|++|..++++++. |+|++||++|.+|++++...+
T Consensus 505 ------~--------~~~l~~~l~-~~l~~~~~P~~i~~v~~l------P~t~~GK~~r~~L~~~~~~~~ 553 (559)
T PRK08315 505 ------T--------EEDVRDFCR-GKIAHYKIPRYIRFVDEF------PMTVTGKIQKFKMREMMIEEL 553 (559)
T ss_pred ------C--------HHHHHHHHH-hhcccccCCcEEEEcccC------CCCCCCceeHHHHHHHHHhhh
Confidence 1 123444443 679999999999998665 999999999999999876644
No 75
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-60 Score=525.01 Aligned_cols=492 Identities=18% Similarity=0.208 Sum_probs=368.0
Q ss_pred ccccCCCCCceeeeccccC---CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 2 SVQKYPGNRMLGWRPFVDG---KFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~---~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
+++++||++|+++. +. ..+.++.+||+||.+++.++|++|.+. +++||+|+++++|++++++++|||+++|++
T Consensus 43 ~~~~~~~~~a~~~~---~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v 118 (612)
T PRK12476 43 NIANVGDTVAYRYL---DHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAAIKAGTI 118 (612)
T ss_pred HHHhCCCceEEEEE---ccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHHHHcCce
Confidence 46789999999886 32 124467899999999999999999986 999999999999999999999999999999
Q ss_pred EeeC-CCCCC--hhHHHHHHhhcCccEEEEcchhHHHHhccccccc-cCccEEEEecCCcHHHHHHhhhCCCceeeHHHH
Q 007257 79 CVPL-YDTLG--PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA-QRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEF 154 (611)
Q Consensus 79 ~~~l-~~~~~--~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (611)
++|+ ++.++ .+++.++++.++++++|+++.....+........ .....++.+++...
T Consensus 119 ~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------------- 179 (612)
T PRK12476 119 AVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD------------------- 179 (612)
T ss_pred eEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc-------------------
Confidence 9999 57776 7899999999999999998776554322111100 01123333322110
Q ss_pred HhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCC-CCCCcEEEEecchhhHHHHH
Q 007257 155 LHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDK-MTVDDVYLSFLPLAHILDRV 233 (611)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~g~~ 233 (611)
.. ..........++++++++|||||||.||||.++|+++...+......+ + +..++++++.+|++|.+|+.
T Consensus 180 --~~-~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~l~~~Pl~h~~g~~ 251 (612)
T PRK12476 180 --SA-GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-----DLLDRNTHGVSWLPLYHDMGLS 251 (612)
T ss_pred --cc-cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-----ccCCCCceEEEeCCcccccchH
Confidence 00 001111234678999999999999999999999999987766544444 4 67789999999999999987
Q ss_pred HHHHHhhcCceEEEecC-----ChHHHHHHHh--hhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 007257 234 IEEYFFRRGASVGYYHG-----DLNALRDDLM--ELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAW 306 (611)
Q Consensus 234 ~~~~~l~~G~~~~~~~~-----~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
..+.+++.|++++++.. ++..+++.++ ++++|+++.+|.++..+........
T Consensus 252 ~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------- 310 (612)
T PRK12476 252 MIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPA--------------------- 310 (612)
T ss_pred HHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChh---------------------
Confidence 76666556666655542 7889999995 5899999999998877754210000
Q ss_pred HhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc---CC---ceeeccccCCCCCceeeccC
Q 007257 307 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC---CA---FLVQGYGLTETCGPTTVCFP 380 (611)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~---~~---~v~~~yG~tE~g~~~~~~~~ 380 (611)
....+ .+++++ +++||+++++++.+.|.+.+ |+ .+++.||+||++..++...+
T Consensus 311 ------------~~~~~--------~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~ 369 (612)
T PRK12476 311 ------------EGDDI--------DLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAP 369 (612)
T ss_pred ------------hhcCc--------chhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCC
Confidence 00000 124889 99999999999999999877 54 48999999999866543322
Q ss_pred CCc--------------------------cccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCCh
Q 007257 381 DEM--------------------------CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNP 434 (611)
Q Consensus 381 ~~~--------------------------~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~ 434 (611)
... ...+++|+|+++++++|+| ++. ..+++.|+.|||+++|++++.||++++
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd-~~~-g~~~~~g~~GEl~v~g~~v~~GY~~~~ 447 (612)
T PRK12476 370 DAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVD-PDT-GAELPDGEVGEIWLHGDNIGRGYWGRP 447 (612)
T ss_pred CCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEe-CCC-CcCCCCCCEEEEEEcCCcccccccCCh
Confidence 110 0125789999999999998 552 245677889999999999999999999
Q ss_pred Hhhhhhcc-------------------CCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHh-cCcCcc
Q 007257 435 DLTRESII-------------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYC-VAPIIE 494 (611)
Q Consensus 435 ~~~~~~~~-------------------~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~-~~p~V~ 494 (611)
+.+.+.|. ++||+|||+|+++ ||+|++.||.||+|++ +|++|+|.+||++|. .||.|.
T Consensus 448 ~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~-~G~~I~p~eIE~~l~~~~p~V~ 525 (612)
T PRK12476 448 EETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVI-DGRNHYPQDIEATVAEASPMVR 525 (612)
T ss_pred HHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEE-CCcccCHHHHHHHHHHhccccc
Confidence 99998883 2499999999984 9999999999999997 999999999999997 589999
Q ss_pred e--EEEEecCCC--CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcce-eeeEEEe
Q 007257 495 D--IWVYGDSLK--SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEH-IKGVILD 569 (611)
Q Consensus 495 ~--~~v~~~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~-p~~i~~~ 569 (611)
+ ++|++.++. +.+++++++.++... .+..++.+.+.+.+.. .+++ |+.+.++
T Consensus 526 ~~~v~v~~~~~~~~~~~~~~v~~~~~~~~---------------~~~~~l~~~~~~~l~~--------~~~~~p~~v~~v 582 (612)
T PRK12476 526 RGYVTAFTVPAEDNERLVIVAERAAGTSR---------------ADPAPAIDAIRAAVSR--------RHGLAVADVRLV 582 (612)
T ss_pred CCcEEEEEecCCCcceEEEEEEecCCccc---------------ccHHHHHHHHHHHHHH--------hhCCcceEEEEE
Confidence 9 777876654 488888887653200 0112233333333321 2445 5778888
Q ss_pred cCCCCCCCCccccccccchHHHHHHHHH
Q 007257 570 PRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 570 ~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+. +.+|+|++||++|++|+++|.+
T Consensus 583 ~~----~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 583 PA----GAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred CC----CCcCcCCchHHHHHHHHHHHHc
Confidence 53 2359999999999999998754
No 76
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-60 Score=516.59 Aligned_cols=497 Identities=21% Similarity=0.226 Sum_probs=387.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 19 ~a~~~p~~~a~~~~----~-----~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~ 89 (540)
T PRK06164 19 HARARPDAVALIDE----D-----RPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIA 89 (540)
T ss_pred HHHhCCCCeEEecC----C-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEe
Confidence 47789999999864 2 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhH-----HHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKV-----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLH 156 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
+++..+.+++.++++.+++++++++++.. ..+........+....++.++...... .......+.++..
T Consensus 90 l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 163 (540)
T PRK06164 90 VNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADAT------PAPAPGARVQLFA 163 (540)
T ss_pred cCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccC------CCCCccccccccc
Confidence 99999999999999999999999986642 111111111123344455544211000 0000001111111
Q ss_pred cccccCC---cCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHH
Q 007257 157 LGKVNEM---EILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRV 233 (611)
Q Consensus 157 ~~~~~~~---~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~ 233 (611)
....... ......++++++++|||||||.||+|.++|.++...+......+ ++..++++++.+|++|.+|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~~ 238 (540)
T PRK06164 164 LPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-----GYDPGAVLLAALPFCGVFGFS 238 (540)
T ss_pred ccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCCEEEEcCCchhHHHHH
Confidence 0000000 01223568899999999999999999999999998887776666 678899999999999999998
Q ss_pred HHHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCC
Q 007257 234 IEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYK 312 (611)
Q Consensus 234 ~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (611)
..+.++..|+++++.+. ++..+++.++++++|+++++|+++..+.+...
T Consensus 239 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~------------------------------ 288 (540)
T PRK06164 239 TLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAG------------------------------ 288 (540)
T ss_pred HHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc------------------------------
Confidence 78888999999988876 89999999999999999999999998875310
Q ss_pred CCCcchHHHHHhhHHHHHHcCCceeEEEEec-CCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC--ccccCcc
Q 007257 313 QREASPLADLLAFRKVKARLGGRLRLVISGG-APLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE--MCMVGTA 389 (611)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G-~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~--~~~~~~~ 389 (611)
....+++++.+.++| .+...+..+++... |+++++.||+||++.+++...... .....+.
T Consensus 289 ----------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 351 (540)
T PRK06164 289 ----------------ERADFPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQPATDPVSVRIEGG 351 (540)
T ss_pred ----------------ccCCCcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccCCCCCCcceeccC
Confidence 001124788877665 55666677777665 899999999999998766554322 1222455
Q ss_pred CCCc-cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccC
Q 007257 390 GPVS-VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKK 467 (611)
Q Consensus 390 G~~~-~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~ 467 (611)
|.+. +++.+++++ ++++ .+++.|+.|||+|+|++++.||+++++.+.+.| .+|||+|||+|+++++|.+++.||.+
T Consensus 352 g~~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~ 429 (540)
T PRK06164 352 GRPASPEARVRARD-PQDG-ALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMG 429 (540)
T ss_pred ccccCCCeEEEEec-CCCC-cCCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecC
Confidence 6664 789999998 4333 566788999999999999999999999999988 68999999999999999999999999
Q ss_pred CeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC--CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHH
Q 007257 468 NLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK--SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYIL 545 (611)
Q Consensus 468 d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (611)
|+|++ +|++|+|.+||+.|.++|+|.+++|++.+.. ..+++++++.++.. . + .
T Consensus 430 ~~i~~-~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~vv~~~~~~--------~--------~--------~ 484 (540)
T PRK06164 430 DSLRL-GGFLVNPAEIEHALEALPGVAAAQVVGATRDGKTVPVAFVIPTDGAS--------P--------D--------E 484 (540)
T ss_pred CeEEE-CCEEcCHHHHHHHHHhCCCceeEEEEecCCCCceeEEEEEEeCCCCC--------C--------C--------H
Confidence 99997 8999999999999999999999999986533 47888888765320 0 1 1
Q ss_pred HHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCcccccc---ccchHHHHHHHHHHH
Q 007257 546 SELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATL---KKKRNKLLIYYQVEI 599 (611)
Q Consensus 546 ~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~G---Kv~R~~l~~~~~~~~ 599 (611)
+++.++++ ..||.+++|+.+.+++.. |+|++| |++|++|++++++.+
T Consensus 485 ~~l~~~~~-~~l~~~~~P~~i~~~~~~------P~t~~g~~~Ki~r~~L~~~~~~~~ 534 (540)
T PRK06164 485 AGLMAACR-EALAGFKVPARVQVVEAF------PVTESANGAKIQKHRLREMAQARL 534 (540)
T ss_pred HHHHHHHH-hhcccCcCCcEEEEecCC------CCCCCCccccccHHHHHHHHHHhh
Confidence 23444554 679999999999998765 999999 999999999876544
No 77
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.7e-60 Score=519.85 Aligned_cols=509 Identities=23% Similarity=0.298 Sum_probs=380.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+.+||++|+++. + +.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 29 ~~~~~p~~~a~~~~----~-----~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~ 99 (567)
T PLN02479 29 AAVVHPTRKSVVHG----S-----VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNC 99 (567)
T ss_pred HHhhCCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEE
Confidence 46689999999875 2 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccc------cccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCR------SAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL 155 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (611)
+++.++.+++.++|+.++++++++++............ .......++.+................+...|.++.
T Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (567)
T PLN02479 100 VNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKFL 179 (567)
T ss_pred eccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHHHH
Confidence 99999999999999999999999988765433221110 001112333333211000000000112334566655
Q ss_pred hcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHH
Q 007257 156 HLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIE 235 (611)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 235 (611)
...............+++++++|||||||.||+|.+||.++..........+ ++..++++++..|++|.+++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~~~~~~ 254 (567)
T PLN02479 180 ETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-----GMNEGAVYLWTLPMFHCNGWCFT 254 (567)
T ss_pred hccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-----CCCCCCEEEEecchhhhhhHHHH
Confidence 4321111111223345678899999999999999999999866554433333 57788999999999999987665
Q ss_pred HH-HhhcCceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCC
Q 007257 236 EY-FFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQR 314 (611)
Q Consensus 236 ~~-~l~~G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (611)
+. .+..|.++++...++..+++.++++++|+++++|.++..|........
T Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~----------------------------- 305 (567)
T PLN02479 255 WTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSET----------------------------- 305 (567)
T ss_pred HHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcc-----------------------------
Confidence 44 466677666655699999999999999999999999998865321100
Q ss_pred CcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC----------Ccc
Q 007257 315 EASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD----------EMC 384 (611)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~----------~~~ 384 (611)
...+++++.++++|+++++.+.+.|.+. +.++++.||+||+++.+..+... ...
T Consensus 306 ---------------~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~ 369 (567)
T PLN02479 306 ---------------ILPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQAR 369 (567)
T ss_pred ---------------cccccceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceeccccccccCcccccc
Confidence 0012488999999999999999999875 89999999999997654432100 011
Q ss_pred ccCccCCCccCee-EEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEE
Q 007257 385 MVGTAGPVSVYSE-LRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKII 463 (611)
Q Consensus 385 ~~~~~G~~~~~~~-v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~ 463 (611)
...+.|.+.++++ +++++.+.+...+.+.++.|||+++|++++.||+++++.+.+.|.+|||+|||+|++|++|++++.
T Consensus 370 ~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~ 449 (567)
T PLN02479 370 LNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIK 449 (567)
T ss_pred cccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcCCccEEEe
Confidence 1135677777775 777772223322222236799999999999999999999999999999999999999999999999
Q ss_pred eccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHH
Q 007257 464 DRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQL 540 (611)
Q Consensus 464 GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (611)
||.+|+|++ +|++|+|.+||..|.+||.|.+++|++.++. +.+++++++..+... ++
T Consensus 450 GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----------------~~--- 509 (567)
T PLN02479 450 DRSKDIIIS-GGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDK----------------SD--- 509 (567)
T ss_pred ccccceEEe-CCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCcccc----------------cc---
Confidence 999999996 9999999999999999999999999997654 378899887764210 00
Q ss_pred HHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 541 QNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 541 ~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.+...+.|.++++ .+||.|+.|+.+.+. + +|+|++||++|++|++.+++
T Consensus 510 ~~~~~~~l~~~~~-~~l~~~~~P~~~~~~-~------iP~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 510 EAALAEDIMKFCR-ERLPAYWVPKSVVFG-P------LPKTATGKIQKHVLRAKAKE 558 (567)
T ss_pred hhhhHHHHHHHHH-hhcccccCCceEEec-c------CCCCCccCeeHHHHHHHHHh
Confidence 1122345566664 679999999988763 3 48999999999999876543
No 78
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-60 Score=510.82 Aligned_cols=472 Identities=20% Similarity=0.236 Sum_probs=374.1
Q ss_pred CCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
.+|++|+++. + +++||.||.+++.++|.+|.+. |+++|++|+++++|+++++++++||+++|++++|+++
T Consensus 16 ~~~~~a~~~~----~-----~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 86 (529)
T PRK07867 16 EDDDRGLYFE----D-----SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNP 86 (529)
T ss_pred ccCCceEEEC----C-----cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecC
Confidence 3789998875 3 6899999999999999999997 8999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCCc
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEME 164 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (611)
.++.+++.++++.++++++|+++.....+.... ... .++.++. ..|.+++.........
T Consensus 87 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~~~-~~~~~~~----------------~~~~~~l~~~~~~~~~ 145 (529)
T PRK07867 87 TRRGAALARDIAHADCQLVLTESAHAELLDGLD----PGV-RVINVDS----------------PAWADELAAHRDAEPP 145 (529)
T ss_pred CCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----cCc-eEEEecc----------------ccHHHHhcccCCCCCC
Confidence 999999999999999999999987665432211 111 1222211 1233333222112222
Q ss_pred CCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhhcCc
Q 007257 165 ILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGA 243 (611)
Q Consensus 165 ~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~ 243 (611)
.....++++++++|||||||.||+|+++|.++......+...+ ++..+|++++..|++|.+++.. .+.++..|+
T Consensus 146 ~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 220 (529)
T PRK07867 146 FRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-----GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGA 220 (529)
T ss_pred cccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-----CCCcccEEEEecchhHHHHHHHHHHHHHhcCc
Confidence 3345778999999999999999999999999988877766655 6788999999999999999876 445688899
Q ss_pred eEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHH
Q 007257 244 SVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADL 322 (611)
Q Consensus 244 ~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (611)
++++.+. ++..+++.++++++|++.++|+.+..++......
T Consensus 221 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~-------------------------------------- 262 (529)
T PRK07867 221 SIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERP-------------------------------------- 262 (529)
T ss_pred eEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcc--------------------------------------
Confidence 9988766 8999999999999999999999988775421100
Q ss_pred HhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEee
Q 007257 323 LAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEE 402 (611)
Q Consensus 323 ~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~ 402 (611)
....++++. ++||+.+++.. ..+.+.+|.++++.||+||+++....... ...+++|.+.++ +++++
T Consensus 263 -------~~~~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE~~~~~~~~~~---~~~~~~g~~~~~--~~i~~ 328 (529)
T PRK07867 263 -------DDADNPLRI-VYGNEGAPGDI-ARFARRFGCVVVDGFGSTEGGVAITRTPD---TPPGALGPLPPG--VAIVD 328 (529)
T ss_pred -------cccccceEE-EecCCCChHHH-HHHHHHhCCcEEEeecccccccccccCCC---CCCCCcCCCCCC--EEEEE
Confidence 000136774 56888887765 56666779999999999999876553321 234778999998 66666
Q ss_pred cCCCCCCCCCCCC------------CcEEEE-ecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCe
Q 007257 403 VPEMGYSPLDDPP------------CGEVCV-RGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNL 469 (611)
Q Consensus 403 ~~~~~~~~~~~~~------------~Gel~v-~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~ 469 (611)
++.+ .+++.++ .|||++ +|++++.||+++++.+.+.|.+|||+|||+|+++++|.+++.||.||+
T Consensus 329 -~~~~-~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~ 406 (529)
T PRK07867 329 -PDTG-TECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYFAGRLGDW 406 (529)
T ss_pred -CCCC-CCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEEeccccCe
Confidence 3322 3345555 899999 999999999999999999999999999999999999999999999999
Q ss_pred EEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHH
Q 007257 470 IKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILS 546 (611)
Q Consensus 470 i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (611)
|++ +|++|+|.+||++|.+||+|.+|+|++.+++ +.+++++++.++.. . +..
T Consensus 407 i~~-~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~--------~--------~~~-------- 461 (529)
T PRK07867 407 MRV-DGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAK--------F--------DPD-------- 461 (529)
T ss_pred EEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCC--------C--------CHH--------
Confidence 997 9999999999999999999999999998765 37888888765420 0 111
Q ss_pred HHHHHHHh-CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 547 ELKNAAER-NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 547 ~l~~~~~~-~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
++++++++ ..|+.+++|..+.++++. |+|++||++|++|+++...
T Consensus 462 ~l~~~~~~~~~l~~~~~P~~i~~~~~i------P~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 462 AFAEFLAAQPDLGPKQWPSYVRVCAEL------PRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred HHHHHHHhhccCCcccCCeEEEEeecc------CCCCCcceeHHHHHHhcCC
Confidence 22333322 359999999999998765 9999999999999987643
No 79
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-60 Score=511.74 Aligned_cols=483 Identities=18% Similarity=0.185 Sum_probs=374.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. ++. +++||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 6 ~a~~~p~~~a~~~~---~~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~ 78 (501)
T PRK13390 6 HAQIAPDRPAVIVA---ETG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITA 78 (501)
T ss_pred hhhhCCCCcEEEec---CCC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEec
Confidence 57889999999875 211 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++++++.+++..++++++++++......... . ......+.+.... .....+++......
T Consensus 79 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-- 141 (501)
T PRK13390 79 INHHLTAPEADYIVGDSGARVLVASAALDGLAAKV-G---ADLPLRLSFGGEI-----------DGFGSFEAALAGAG-- 141 (501)
T ss_pred cccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHh-h---hccceEEEecCcc-----------cccccHHHHhcccC--
Confidence 99999999999999999999999987543222111 0 0011111111110 01112332221110
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeee--ccHhHHHhhhh----cccccccccCCCCCCcEEEEecchhhHHHHHHH
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVL--THETIATFVSG----VDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIE 235 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~--s~~~l~~~~~~----~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 235 (611)
......+++++++|||||||.||+|++ +|.++...... ....+ .+..++++++.+|++|.+++.+.
T Consensus 142 ---~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~~~~~~ 213 (501)
T PRK13390 142 ---PRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-----DISESDIYYSSAPIYHAAPLRWC 213 (501)
T ss_pred ---CCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-----CCCCCCeEEecccchhhhHHHHH
Confidence 001122357999999999999999996 45554432111 11122 57788999999999999988766
Q ss_pred HHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCC
Q 007257 236 EYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQR 314 (611)
Q Consensus 236 ~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (611)
...+..|+++++.+. ++..+++.++++++|++.++|+++..+........
T Consensus 214 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~----------------------------- 264 (501)
T PRK13390 214 SMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVR----------------------------- 264 (501)
T ss_pred HHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhc-----------------------------
Confidence 566778999988776 89999999999999999999999988764211100
Q ss_pred CcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCcc
Q 007257 315 EASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSV 394 (611)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~ 394 (611)
.. ..++++|.+++||+++++++.+.+.+.+|.++++.||+||+++++...........+++|.|++
T Consensus 265 ------~~--------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~ 330 (501)
T PRK13390 265 ------TR--------YDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVL 330 (501)
T ss_pred ------cc--------CChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCccc
Confidence 00 0113889999999999999999999988999999999999987655443332334578999999
Q ss_pred CeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc---CCccccCceEEEccCCeEEEEeccCCeEE
Q 007257 395 YSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII---DGWFHTGDIGQILPNGVVKIIDRKKNLIK 471 (611)
Q Consensus 395 ~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~dG~l~~~GR~~d~i~ 471 (611)
+ ++++++ +++ .+++.|+.|||+++|++++.||+++++.+.+.|. ++|++|||+|++|+||++++.||.||+|+
T Consensus 331 g-~~~i~d-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~ 406 (501)
T PRK13390 331 G-DLHICD-DDG--NELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMII 406 (501)
T ss_pred c-eEEEEC-CCC--CCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeecccccee
Confidence 9 688887 444 4567889999999999999999999999998873 68999999999999999999999999999
Q ss_pred cCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHH
Q 007257 472 ISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSEL 548 (611)
Q Consensus 472 ~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (611)
+ +|.+|+|.+||++|.+||+|.+++|++.++. +.+++++++..+.. .. +...++|
T Consensus 407 ~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~-----------------~~----~~~~~~l 464 (501)
T PRK13390 407 S-GGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIR-----------------GS----DELAREL 464 (501)
T ss_pred E-CCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCC-----------------cc----hhhHHHH
Confidence 6 8999999999999999999999999998765 37888888765320 00 1122345
Q ss_pred HHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHH
Q 007257 549 KNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLL 592 (611)
Q Consensus 549 ~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~ 592 (611)
.++++ .+|+.|++|..++++++. |+|++||++|++|+
T Consensus 465 ~~~~~-~~l~~~~~P~~~~~~~~i------P~t~~GKi~r~~L~ 501 (501)
T PRK13390 465 IDYTR-SRIAHYKAPRSVEFVDEL------PRTPTGKLVKGLLR 501 (501)
T ss_pred HHHHH-HhcccCCCCcEEEEeccC------CCCCccceehhhcC
Confidence 55664 679999999999999765 99999999999874
No 80
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.1e-60 Score=511.86 Aligned_cols=487 Identities=22% Similarity=0.212 Sum_probs=392.6
Q ss_pred cccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 3 VQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 3 a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
++.+||++|+++. + +.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+
T Consensus 15 ~~~~p~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 15 VEGRGGKTAFIDD---I------SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred hcccCCceEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeec
Confidence 5679999999875 3 689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccC
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNE 162 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (611)
++.++.+++.++++.++++++++++.....+.+.. ...+....++..+.... ....+.++..... ..
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~ 152 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLPVIKAAL-GKSPHLEHRVVVGRPEA-----------GEVQLAELLATES-EQ 152 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHH-hcCCCccEEEEeCCCCc-----------ccccHHHHhhcCC-Cc
Confidence 99999999999999999999999987665443221 12234445554443211 1223333332221 11
Q ss_pred CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhh-cccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhh
Q 007257 163 MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG-VDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFR 240 (611)
Q Consensus 163 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~ 240 (611)
.......++++++++|||||||.||+|+++|+++...+.. ....+ +++.+|+++...|++|.+++.. ++.++.
T Consensus 153 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~~l~ 227 (508)
T TIGR02262 153 FKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-----GIREDDVVFSAAKLFFAYGLGNALTFPMS 227 (508)
T ss_pred cCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-----CCCCCCEEEEcCchHHHHHHHHHHHHHHH
Confidence 1223446789999999999999999999999999877655 22233 6788999999999999999865 555788
Q ss_pred cCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 007257 241 RGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASP 318 (611)
Q Consensus 241 ~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (611)
.|+++++.+. ++..+++.++++++|.++++|.++..+......
T Consensus 228 ~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~----------------------------------- 272 (508)
T TIGR02262 228 VGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNL----------------------------------- 272 (508)
T ss_pred cCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccc-----------------------------------
Confidence 9999988765 799999999999999999999988776431100
Q ss_pred HHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeE
Q 007257 319 LADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSEL 398 (611)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v 398 (611)
+...+++++.++++|+++++++.+.|.+.+|+++++.||+||++.++..+.... ...+++|.|.+++++
T Consensus 273 ----------~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~-~~~~~~G~~~~g~~v 341 (508)
T TIGR02262 273 ----------PAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGD-VRYGTSGKPVPGYRL 341 (508)
T ss_pred ----------cccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCccC-CCCCCcCCCCCCcEE
Confidence 000124899999999999999999999999999999999999998766554332 233788999999999
Q ss_pred EEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceec
Q 007257 399 RLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYV 478 (611)
Q Consensus 399 ~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v 478 (611)
++++ +++ .+++.++.|||+++|++++.||+++++.+.+.|.++||+|||+++++++|.+++.||.+|++++ +|.++
T Consensus 342 ~i~d-~~~--~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~-~G~~v 417 (508)
T TIGR02262 342 RLVG-DGG--QDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRTDDMLKV-SGIYV 417 (508)
T ss_pred EEEC-CCC--CCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcCCccEEEeccccceeee-CCEEE
Confidence 9998 544 4566788999999999999999999999999999999999999999999999999999999997 89999
Q ss_pred CcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhC
Q 007257 479 ALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERN 555 (611)
Q Consensus 479 ~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (611)
+|.+||+.|.++|+|.++++++.++. ..+.+++++.+... . .+.+.+++.+.++ .
T Consensus 418 ~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----------------~----~~~~~~~i~~~~~-~ 475 (508)
T TIGR02262 418 SPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQD-----------------I----DTALETELKEHVK-D 475 (508)
T ss_pred CHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCc-----------------c----ccccHHHHHHHHH-H
Confidence 99999999999999999999996544 36778888765420 0 0112344555554 6
Q ss_pred CCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 556 KLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 556 ~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
.|+.++.|..+.+++++ |+|++||++|++|+++
T Consensus 476 ~l~~~~~p~~i~~~~~i------P~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 476 RLAPYKYPRWIVFVDDL------PKTATGKIQRFKLREG 508 (508)
T ss_pred hcccCCCCceEEEecCC------CCCCCCcEehhhccCC
Confidence 79999999999988665 9999999999998753
No 81
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-60 Score=515.49 Aligned_cols=498 Identities=22% Similarity=0.254 Sum_probs=388.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++++++. . .+..+++||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 19 ~a~~~~~~~~~~~~---~--~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~ 93 (542)
T PRK06018 19 AARIHGNREVVTRS---V--EGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHT 93 (542)
T ss_pred HHHhCCCceEEEee---c--cCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeec
Confidence 57899999999854 1 233578999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.+++++++++.+....+.+... ..+....++...+.... ..........|.++..... .
T Consensus 94 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~ 167 (542)
T PRK06018 94 VNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIAD-KLPSVERYVVLTDAAHM----PQTTLKNAVAYEEWIAEAD-G 167 (542)
T ss_pred cccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHh-hCCCccEEEEecccccc----cccCccccccHHHHhccCC-c
Confidence 9999999999999999999999999876655433221 12334445544332110 0001112334555544332 1
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHH-Hhh-hhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHh
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIA-TFV-SGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFF 239 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~-~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l 239 (611)
........++++++++|||||||.||+|.+||+++. ... ......+ ++..+|+++...|++|.+++...+.++
T Consensus 168 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~h~~~~~~~~~~~ 242 (542)
T PRK06018 168 DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-----GTSAADTMLPVVPLFHANSWGIAFSAP 242 (542)
T ss_pred ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-----CCCCCCEEEEecCHHHHhhhHHHHhhh
Confidence 222234567889999999999999999999999743 222 2222223 577889999999999999887777788
Q ss_pred hcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 240 RRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 240 ~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
..|+++++... ++..+++.++++++|++.++|+++..+.+......
T Consensus 243 ~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~-------------------------------- 290 (542)
T PRK06018 243 SMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEG-------------------------------- 290 (542)
T ss_pred hcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccC--------------------------------
Confidence 99999988653 88999999999999999999999998865322110
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC----------ccccC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE----------MCMVG 387 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~----------~~~~~ 387 (611)
..++++|.++++|+++++++.++|++ ++.++++.||+||++.+.+.+.... .....
T Consensus 291 -------------~~~~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (542)
T PRK06018 291 -------------LKLPHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQ 356 (542)
T ss_pred -------------CCcccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccccCCchhhhhccc
Confidence 01148999999999999999999999 8999999999999998765442111 01125
Q ss_pred ccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEecc
Q 007257 388 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRK 466 (611)
Q Consensus 388 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~ 466 (611)
+.|.|.+++++++++ +++...+.+.+..|||+++|+.++.||+++. ...+ .+|||+|||+++++++|++++.||.
T Consensus 357 ~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~ 432 (542)
T PRK06018 357 KQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAYYRVD---GEILDDDGFFDTGDVATIDAYGYMRITDRS 432 (542)
T ss_pred cCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhhhcCc---ccEecCCcEEEcCCEEEEcCCccEEEEecC
Confidence 789999999999998 6665555444467999999999999999842 2233 5799999999999999999999999
Q ss_pred CCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHH
Q 007257 467 KNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNY 543 (611)
Q Consensus 467 ~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (611)
+|+|++ +|.++++.+||+.+.+||+|.+|+|++.++. +.+.++|++.++.. . +
T Consensus 433 ~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~--------~------- 488 (542)
T PRK06018 433 KDVIKS-GGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGET--------A--------T------- 488 (542)
T ss_pred CCeEEE-CCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCCC--------C--------C-------
Confidence 999996 9999999999999999999999999997754 36778887765320 0 1
Q ss_pred HHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 544 ILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 544 ~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.+.+.++++ ..++.+.+|+.+.++++. |+|++||++|++|+++|.+
T Consensus 489 -~~~l~~~~~-~~l~~~~~P~~i~~v~~i------P~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 489 -REEILKYMD-GKIAKWWMPDDVAFVDAI------PHTATGKILKTALREQFKD 534 (542)
T ss_pred -HHHHHHHHH-hhCccccCCcEEEEeccC------CCCCcchhhHHHHHHHHhc
Confidence 123444443 679999999999999765 9999999999999998865
No 82
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-60 Score=514.15 Aligned_cols=474 Identities=20% Similarity=0.195 Sum_probs=370.3
Q ss_pred cCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCC
Q 007257 5 KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLY 83 (611)
Q Consensus 5 ~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~ 83 (611)
.+|+++|+++. + ..+||.||.+++.++|..|.+.|+ .+||+|+++++|+++++++++||+++|++++|++
T Consensus 13 ~~p~~~Al~~~----~-----~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~ 83 (540)
T PRK13388 13 AGDDTIAVRYG----D-----RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLN 83 (540)
T ss_pred ccCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEec
Confidence 47999999875 3 589999999999999999999999 7999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCC
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEM 163 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (611)
|.++.+++.++++.+++++++++++....+.... .+... ++.++.. .+.++..... ...
T Consensus 84 p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~~-~i~~~~~----------------~~~~~~~~~~-~~~ 142 (540)
T PRK13388 84 TTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD---LPGVR-VLDVDTP----------------AYAELVAAAG-ALT 142 (540)
T ss_pred ccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc---ccCce-EEEccch----------------hhhhhhcccc-CcC
Confidence 9999999999999999999999877655442211 12222 2222211 1222222111 111
Q ss_pred cCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHH-HHhhcC
Q 007257 164 EILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEE-YFFRRG 242 (611)
Q Consensus 164 ~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~-~~l~~G 242 (611)
......++++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|++|.+++...+ .++..|
T Consensus 143 ~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G 217 (540)
T PRK13388 143 PHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-----GLTRDDVCYVSMPLFHSNAVMAGWAPAVASG 217 (540)
T ss_pred CCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-----CCCCCCEEEEeeCchhhcchHHHHHHHHHcC
Confidence 12235679999999999999999999999999988777666655 788899999999999998887644 468899
Q ss_pred ceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 243 ASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 243 ~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
+++++.+. ++..+++.++++++|++..+|..+..+...... + .
T Consensus 218 ~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~----------------------------------~--~ 261 (540)
T PRK13388 218 AAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPER----------------------------------P--D 261 (540)
T ss_pred cEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC----------------------------------c--c
Confidence 99988765 899999999999999999999988776531100 0 0
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEE--
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR-- 399 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~-- 399 (611)
...++++.+ .|+++++.....|.+.+++++++.||+||++.++..... ...+++|.|++++++.
T Consensus 262 ---------~~~~~l~~~--~G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~---~~~~~vG~p~~g~~i~~~ 327 (540)
T PRK13388 262 ---------DADNPLRVA--FGNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVREPG---TPPGSIGRGAPGVAIYNP 327 (540)
T ss_pred ---------ccccceEEE--ECCCCCHHHHHHHHHHhCCceecccccccccceeecCCC---CCCCCCCCCCCCcEEEcC
Confidence 001256643 366778888888888889999999999999876654321 2347899999986643
Q ss_pred ---------EeecCCCCCCCCCCCCCcEEEEe-cCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCe
Q 007257 400 ---------LEEVPEMGYSPLDDPPCGEVCVR-GKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNL 469 (611)
Q Consensus 400 ---------i~~~~~~~~~~~~~~~~Gel~v~-~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~ 469 (611)
++| ++ +....+.++.|||+++ |++++.||+++++.+.+.|.+|||+|||+|++++||++++.||.+|+
T Consensus 328 ~~~~~~~~~~~d-~~-g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~ 405 (540)
T PRK13388 328 ETLTECAVARFD-AH-GALLNADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDADGWIYFAGRTADW 405 (540)
T ss_pred CCCccccceecc-Cc-cccccCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcCCCcEEEeccCCce
Confidence 111 11 1111234568999998 99999999999999999998999999999999999999999999999
Q ss_pred EEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHH
Q 007257 470 IKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILS 546 (611)
Q Consensus 470 i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (611)
|++ +|++|+|.+||++|.+||+|.+|+|++.++. +.+++++++.++.. . +. +
T Consensus 406 i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~--------~--------~~--------~ 460 (540)
T PRK13388 406 MRV-DGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGAT--------F--------DP--------D 460 (540)
T ss_pred EEE-CCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCc--------C--------CH--------H
Confidence 997 9999999999999999999999999997754 36777777765320 0 11 1
Q ss_pred HHHHHHHh-CCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 547 ELKNAAER-NKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 547 ~l~~~~~~-~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
.+++++.. ..|+.+++|..++++++. |+|++||++|++|+++..
T Consensus 461 ~l~~~l~~~~~l~~~~~P~~~~~v~~i------P~t~~GKv~R~~L~~~~~ 505 (540)
T PRK13388 461 AFAAFLAAQPDLGTKAWPRYVRIAADL------PSTATNKVLKRELIAQGW 505 (540)
T ss_pred HHHHHHHhhccCCcccCCcEEEEeccC------CCCCcceeeHHhHHHhcc
Confidence 22233321 369999999999998665 999999999999988653
No 83
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.8e-60 Score=513.52 Aligned_cols=476 Identities=18% Similarity=0.209 Sum_probs=382.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+.+||++|+.+. + +.+||.||.+++.++|..|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 9 ~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (502)
T TIGR01734 9 FAETYPQTIAYRYQ---G------QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIP 79 (502)
T ss_pred HHHHCCCceEEEcC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeC
Confidence 57789999998875 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++..+++++++++........ .. ++.++.. ..+.... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--------~~-~~~~~~~------------------~~~~~~~-~~ 131 (502)
T TIGR01734 80 VDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--------TQ-IITLSAL------------------EQAETSG-GP 131 (502)
T ss_pred CCCcChHHHHHHHHHhcCCCEEEecccccccccC--------Cc-eEEchHh------------------hhhhhhc-CC
Confidence 9999999999999999999999998764322211 11 1111110 0111111 01
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.++|.++...+......+ ....++++++..|++|..++..++.++..
T Consensus 132 ~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~l~~ 206 (502)
T TIGR01734 132 VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-----PLSEGKQFLNQAPFSFDLSVMDLYPCLAS 206 (502)
T ss_pred ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-----CCCCCceEEeecCceechhHHHHHHHHHC
Confidence 1112234678999999999999999999999999998877665554 67888999999999999988888888999
Q ss_pred CceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 242 GASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 242 G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
|+++++.+. ++..+++.+.++++|.+.++|.++..+......
T Consensus 207 G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~---------------------------------- 252 (502)
T TIGR01734 207 GGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNF---------------------------------- 252 (502)
T ss_pred CCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccc----------------------------------
Confidence 999998864 788999999999999999999998766431100
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCC----CccccCccCCC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD----EMCMVGTAGPV 392 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~----~~~~~~~~G~~ 392 (611)
....+++++.++++|++++++..+.+.+.+ ++++++.||+||+++........ ......++|.+
T Consensus 253 -----------~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~ 321 (502)
T TIGR01734 253 -----------NQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFA 321 (502)
T ss_pred -----------ccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccc
Confidence 001125899999999999999999998887 78999999999998654433211 12223578999
Q ss_pred ccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc----CCccccCceEEEccCCeEEEEeccCC
Q 007257 393 SVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII----DGWFHTGDIGQILPNGVVKIIDRKKN 468 (611)
Q Consensus 393 ~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGD~~~~~~dG~l~~~GR~~d 468 (611)
.+++++++++ +++ .+++.++.|||+++|+.++.||+++++.+.+.|. .+||+|||+|++|++ ++++.||.+|
T Consensus 322 ~~~~~~~i~~-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d 397 (502)
T TIGR01734 322 KPDMNLFIMD-EEG--EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDF 397 (502)
T ss_pred cCCCEEEEEC-CCC--CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccC
Confidence 9999999998 554 4556778999999999999999999999988772 259999999999966 9999999999
Q ss_pred eEEcCCceecCcHHHHHHHhcCcCcceEEEEecC--C--CCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHH
Q 007257 469 LIKISQGEYVALEYLENVYCVAPIIEDIWVYGDS--L--KSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYI 544 (611)
Q Consensus 469 ~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~--~--~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
+|++ +|++|+|.+||+.+.++|+|.++++++.. + .+.++++|++...... ... .+
T Consensus 398 ~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~----------------~~~----~~ 456 (502)
T TIGR01734 398 QIKL-HGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFE----------------KEF----QL 456 (502)
T ss_pred eEEE-CcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccc----------------cch----hh
Confidence 9997 99999999999999999999999999843 1 1478888888764210 111 22
Q ss_pred HHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 545 LSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 545 ~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
.+++++.++ +.|+.+++|+.+++++.. |+|++||++|++|++++.
T Consensus 457 ~~~i~~~~~-~~l~~~~~P~~~~~v~~l------P~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 457 TKAIKKELK-KSLPAYMIPRKFIYRDQL------PLTANGKIDRKALAEEVN 501 (502)
T ss_pred HHHHHHHHh-hhChhhcCCcEEEEcccc------CCCCCCcccHHHHHHhhc
Confidence 234555554 679999999999998765 999999999999999764
No 84
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=8.8e-59 Score=528.51 Aligned_cols=555 Identities=20% Similarity=0.295 Sum_probs=436.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++|+++|+... . ..++++++||+|+.+++.++|.+|.+.|+++||+|+|+++|+++|+++.+||+++|++++|
T Consensus 436 ~a~~~pd~~al~~~---~-~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VP 511 (1452)
T PTZ00297 436 SVTRHSTFRCLGQT---S-ESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLP 511 (1452)
T ss_pred HHHHCCCCeEEEEe---c-cCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEe
Confidence 47789999998643 1 1345688999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHH-HHhhhCCCceeeHHHHHhcccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQK-EMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
+++ +.+++.++++.++++++|++.+....+..... +.++.|+++++...... ......+....+|+++...+..
T Consensus 512 ly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~~ 586 (1452)
T PTZ00297 512 LVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---RKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGRL 586 (1452)
T ss_pred CCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---cCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCcc
Confidence 975 46799999999999999999887766544321 36788888864211000 0000112345679998876632
Q ss_pred cCC-cCCCCCCCCeEEEEE---ecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHH
Q 007257 161 NEM-EILPPQPFNICTIMY---TSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEE 236 (611)
Q Consensus 161 ~~~-~~~~~~~~~~a~i~~---TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~ 236 (611)
... ......++|++.|+| ||||||.||||++||+|++..+..+..... ......+|++++.+|++|+++....+
T Consensus 587 ~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~--~~~~~~~D~~Ls~LPLaHI~er~~~~ 664 (1452)
T PTZ00297 587 CPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGV--LPSSFKKHLMVHFTPFAMLFNRVFVL 664 (1452)
T ss_pred cCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhcc--ccCCCCCCEEEEechHHHHHHHHHHH
Confidence 111 122347889999996 999999999999999999998887543210 01245789999999999999977777
Q ss_pred HHhhcCceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 237 YFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 237 ~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
.++..|+++.+. ++..+++.|++++||+++++|.+++++.+.+.+.....+.+++++++.+...+...+..+ ...
T Consensus 665 ~~l~~G~~I~~~--d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g---~~~ 739 (1452)
T PTZ00297 665 GLFAHGSAVATV--DAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIH---RRD 739 (1452)
T ss_pred HHHHcCCEEEeC--CHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC---CCC
Confidence 788999998753 789999999999999999999999999988887777777889999988877766555433 345
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecC--CCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCcc
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGA--PLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSV 394 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~--~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~ 394 (611)
.++++.+.+++++..+|+++|.+++||+ +++..+.. ++++..+||+||.. +.+.++... ..|.|+|
T Consensus 740 ~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------~i~i~~g~glTE~~---~~~~~~~~~---~~G~Plp 807 (1452)
T PTZ00297 740 SSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------HISVCYVPCLREVF---FLPSEGVFC---VDGTPAP 807 (1452)
T ss_pred cHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------CceEEEecceEEee---eecCCCCcc---cCCeecC
Confidence 6789999999999999999999999984 55533322 67789999999943 333333322 2399999
Q ss_pred CeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCC
Q 007257 395 YSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQ 474 (611)
Q Consensus 395 ~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~ 474 (611)
++++++.++++.+.. +..|||++++ +++++.|++. .+||+ +||+|+|.||.+|+|+.++
T Consensus 808 gvEvKI~~~~E~~~~----~~~GEIlvr~-------~kdpe~T~e~-~~gW~---------~dG~L~IidRkKdlikls~ 866 (1452)
T PTZ00297 808 SLQVDLEPFDEPSDG----AGIGQLVLAK-------KGEPRRTLPI-AAQWK---------RDRTLRLLGPPLGILLPVA 866 (1452)
T ss_pred ceEEEEcccccccCC----CCCCeEEEEE-------CCChHHHHHh-hCcCc---------cCCeEEEEeccccceECCC
Confidence 999999985443322 2359999964 5889999874 36775 6999999999999999999
Q ss_pred ceecCcHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHH-HHHHHCCCCC--------cHHHHhccHHHHHHHH
Q 007257 475 GEYVALEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTK-KWAYSNGHAG--------SFLELCSLVQLQNYIL 545 (611)
Q Consensus 475 G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 545 (611)
|++|+|..||+.+.++|.|.+++|+|.+. +.++|+|+++.+... .|...++... ...+++.+ ..+.+.
T Consensus 867 GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~-k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~--~~~~v~ 943 (1452)
T PTZ00297 867 YEYVIAAELERIFSQSRYVNDIFLYADPS-RPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAY--ASSLLT 943 (1452)
T ss_pred CcEEcHHHHHHHHhcCCCccEEEEEecCC-CceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHh--HHHHHH
Confidence 99999999999999999999999999874 459999999999988 8988876521 33444321 122344
Q ss_pred HHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHHhhhcC
Q 007257 546 SELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLYEKLAP 608 (611)
Q Consensus 546 ~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y~~~~~ 608 (611)
+.+++..+.+.+..+.+++.+.+++++|++++.-.||+.|++|..+.+.|+++|++||++.++
T Consensus 944 ~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~LY~~~~~ 1006 (1452)
T PTZ00297 944 ADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIERFYSDVET 1006 (1452)
T ss_pred HHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHHHhccccc
Confidence 444444444558889999999999999999999999999999999999999999999996544
No 85
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=4.4e-60 Score=514.35 Aligned_cols=501 Identities=24% Similarity=0.278 Sum_probs=386.0
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++|+++|+.+. + +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 30 ~~~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~ 100 (541)
T TIGR03205 30 AAADYGPRPALEFR---D------RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVH 100 (541)
T ss_pred HHHHcCCCceEEEC---C------cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEe
Confidence 46789999999875 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhH--HHHhccccccccCccEEEEecCCcHHH-HH--HhhhCCCceeeHHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKV--KELLSPDCRSAQRLRVMVCFTSLTAEQ-KE--MAVQTGIKPYSWDEFLH 156 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 156 (611)
++|.++.+++.++++.++++++++++... ......... .....+++.+...... .. ..........+++++..
T Consensus 101 l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 101 LSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK--GLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred cCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc--ccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 99999999999999999999999986321 111111110 1122333333211000 00 00001122345555554
Q ss_pred cccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhccccccc-ccCCCCCCcEEEEecchhhHHHHHH-
Q 007257 157 LGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQ-FEDKMTVDDVYLSFLPLAHILDRVI- 234 (611)
Q Consensus 157 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~p~~~~~g~~~- 234 (611)
.. ..........++++++++|||||||.||+|.++|.++....... ..+.. ........+++++..|++|.+++..
T Consensus 179 ~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~ 256 (541)
T TIGR03205 179 GA-AAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIYALTVI 256 (541)
T ss_pred cC-CCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHHHHHHH
Confidence 32 11112234567899999999999999999999999987654322 11100 0112334578999999999988776
Q ss_pred HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCC
Q 007257 235 EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQ 313 (611)
Q Consensus 235 ~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (611)
++.++..|+++++.+. ++..+++.|+++++|++.++|+++..+.+...
T Consensus 257 ~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------------- 305 (541)
T TIGR03205 257 LLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPS------------------------------- 305 (541)
T ss_pred HHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc-------------------------------
Confidence 5557888999888766 99999999999999999999999987754110
Q ss_pred CCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCc
Q 007257 314 REASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS 393 (611)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~ 393 (611)
.. ...+++++.+++||+++++++.+++.+.++.++++.||+||++..+..........++++|.++
T Consensus 306 ------~~--------~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~ 371 (541)
T TIGR03205 306 ------LE--------KRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLML 371 (541)
T ss_pred ------cc--------ccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCCCCCCCcceec
Confidence 00 0011489999999999999999999988899999999999999877665443333457899999
Q ss_pred cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcC
Q 007257 394 VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKIS 473 (611)
Q Consensus 394 ~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~ 473 (611)
+++.+++.+. ++...+++.++.|||+++|++++.||+++++.+.+.|.++||+|||+++++++|++++.||.+|+|++
T Consensus 372 ~~~~~~v~~~-d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~- 449 (541)
T TIGR03205 372 PGIELDVVSL-DDPTKVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIIS- 449 (541)
T ss_pred cCceeEEEec-CCCCccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEEE-
Confidence 9999998763 33335667788999999999999999999999999999999999999999999999999999999996
Q ss_pred CceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHH
Q 007257 474 QGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKN 550 (611)
Q Consensus 474 ~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (611)
+|++|+|.+||+.|.+||+|.+++|++.++. +.+++++++.++.. .. + .+++.+
T Consensus 450 ~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---------~~------~--------~~~l~~ 506 (541)
T TIGR03205 450 GGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAK---------PF------S--------LDELRA 506 (541)
T ss_pred CCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCC---------cC------C--------HHHHHH
Confidence 9999999999999999999999999987654 46888888765320 00 1 123444
Q ss_pred HHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHH
Q 007257 551 AAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLL 592 (611)
Q Consensus 551 ~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~ 592 (611)
+++ +.|+.|++|+.|+++++. |+|++||++|++|+
T Consensus 507 ~~~-~~l~~~~~P~~i~~~~~i------P~t~~gK~~r~~l~ 541 (541)
T TIGR03205 507 FLA-GKLGKHELPVAVEFVDEL------PRTPVGKLSRHELR 541 (541)
T ss_pred HHH-hhcccccCCcEEEEeccC------CCCcccceeHhhcC
Confidence 443 679999999999999765 99999999999873
No 86
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=4.4e-61 Score=611.08 Aligned_cols=471 Identities=19% Similarity=0.239 Sum_probs=392.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +++||+||+++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 3104 ~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vp 3174 (3956)
T PRK12467 3104 QVARTPEAPALVFG---D------QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVP 3174 (3956)
T ss_pred HHHhCCCcceEeeC---C------cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeec
Confidence 57889999999987 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++.++++.+++++++++......+... ....++.++... ......
T Consensus 3175 ld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~------~~~~~~~~~~~~---------------------~~~~~~ 3227 (3956)
T PRK12467 3175 LDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP------AGDTALTLDRLD---------------------LNGYSE 3227 (3956)
T ss_pred CCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc------cCCceeeecchh---------------------hcccCC
Confidence 99999999999999999999999987654433111 011122222111 001111
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||||+++|+++.+.+......+ +++.+|++++..|++|..+...++.++..
T Consensus 3228 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~L~~ 3302 (3956)
T PRK12467 3228 NNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-----ELDANDRVLLFMSFSFDGAQERFLWTLIC 3302 (3956)
T ss_pred CCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhc-----CCCcCCEEEEecCccHhHHHHHHHHHHhC
Confidence 1222345789999999999999999999999999999998877766 78899999999999999998888899999
Q ss_pred CceEEEecC---ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 007257 242 GASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASP 318 (611)
Q Consensus 242 G~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (611)
|+++++.+. ++..+++.|+++++|++.++|++++.+.+...
T Consensus 3303 G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~------------------------------------ 3346 (3956)
T PRK12467 3303 GGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG------------------------------------ 3346 (3956)
T ss_pred CCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc------------------------------------
Confidence 999999874 78999999999999999999999988764210
Q ss_pred HHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCc----cccCccCCCc
Q 007257 319 LADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEM----CMVGTAGPVS 393 (611)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~----~~~~~~G~~~ 393 (611)
...+++||.+++||+++++++.+.|.+.+ ++.++|.||+||++..++....... ....++|+|+
T Consensus 3347 -----------~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~ 3415 (3956)
T PRK12467 3347 -----------GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPV 3415 (3956)
T ss_pred -----------ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCcccc
Confidence 01124899999999999999999998876 6789999999999987665432211 1236799999
Q ss_pred cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cC-------CccccCceEEEccCCeEEEEec
Q 007257 394 VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-ID-------GWFHTGDIGQILPNGVVKIIDR 465 (611)
Q Consensus 394 ~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~-------g~~~TGD~~~~~~dG~l~~~GR 465 (611)
++++++|+| +++ .+++.|+.|||+|+|++++.||+++++.|+++| .+ +||+|||+|++++||.+++.||
T Consensus 3416 ~~~~~~v~d-~~~--~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR 3492 (3956)
T PRK12467 3416 AGRSIYVLD-GQL--NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGR 3492 (3956)
T ss_pred CCCEEEEEC-CCC--CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEecc
Confidence 999999998 544 567788999999999999999999999999999 44 3699999999999999999999
Q ss_pred cCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCC--CCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHH
Q 007257 466 KKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSL--KSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNY 543 (611)
Q Consensus 466 ~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~--~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (611)
.||+||+ +|++|+|.|||++|.++|+|.+|+|++..+ .+.++|++++..+.. .
T Consensus 3493 ~d~~iki-~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~~~~~~lva~v~~~~~~~------------------------~ 3547 (3956)
T PRK12467 3493 IDHQVKI-RGFRIELGEIEARLLQHPSVREAVVLARDGAGGKQLVAYVVPADPQG------------------------D 3547 (3956)
T ss_pred ccceEee-ceEeecHHHHHHHHhhCcccceEEEEEecCCCCcEEEEEEeCCCCCc------------------------c
Confidence 9999998 999999999999999999999999997643 358999999875310 0
Q ss_pred HHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHH
Q 007257 544 ILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYY 595 (611)
Q Consensus 544 ~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~ 595 (611)
..+.++++++ ..||.|++|..|++++.. |+|++||++|++|.+.+
T Consensus 3548 ~~~~l~~~l~-~~Lp~y~vP~~~~~l~~l------P~t~~GKidR~~L~~~~ 3592 (3956)
T PRK12467 3548 WRETLRDHLA-ASLPDYMVPAQLLVLAAM------PLGPNGKVDRKALPDPD 3592 (3956)
T ss_pred cHHHHHHHHh-ccCChhhCCCeeeeeccC------CCCCCCccchhhcCCCC
Confidence 1234555554 789999999999988664 99999999999998754
No 87
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-60 Score=504.71 Aligned_cols=453 Identities=26% Similarity=0.291 Sum_probs=369.3
Q ss_pred cccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 3 VQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 3 a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
+.+.++++|+++. + +++||.||.++++++|..|. ++|+|+++++|++++++++|||+++|++++|+
T Consensus 10 ~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l 75 (471)
T PRK07787 10 AAAADIADAVRIG----G-----RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPV 75 (471)
T ss_pred hcccCCceEEEeC----C-----cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeec
Confidence 4567899998875 3 79999999999999999996 46999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccC
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNE 162 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (611)
++.++.+++.+++++++++++++++.... . ..+... +... ...|
T Consensus 76 ~~~~~~~~l~~~l~~~~~~~il~~~~~~~---~----~~~~~~--~~~~----------------~~~~----------- 119 (471)
T PRK07787 76 PPDSGVAERRHILADSGAQAWLGPAPDDP---A----GLPHVP--VRLH----------------ARSW----------- 119 (471)
T ss_pred CCCCChHHHHHHHHhcCCCEEEecCCccc---c----ccccee--eecc----------------cccc-----------
Confidence 99999999999999999999999763110 0 000000 0000 0000
Q ss_pred CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhhc
Q 007257 163 MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRR 241 (611)
Q Consensus 163 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~ 241 (611)
.......++++++++|||||||.||+|.++|.++...+......+ ++..++++++.+|++|.+|+.. .+.++..
T Consensus 120 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 194 (471)
T PRK07787 120 HRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW-----QWTADDVLVHGLPLFHVHGLVLGVLGPLRI 194 (471)
T ss_pred ccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-----CCCccceeEeccCCeeechhHHHHHHHHhc
Confidence 011124578999999999999999999999999998887766655 6778899999999999999886 5667999
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++.+. ++..+++.++ +++|+++++|.++..+.+....
T Consensus 195 G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~------------------------------------- 236 (471)
T PRK07787 195 GNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA------------------------------------- 236 (471)
T ss_pred CCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-------------------------------------
Confidence 999988866 9999999999 9999999999999887642100
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
...++++|.+++||+++++++.++|.+.++.++++.||+||++...+.... ....++++|.|+++++++|
T Consensus 237 ---------~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~vG~~~~g~~~~i 306 (471)
T PRK07787 237 ---------ARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRAD-GERRPGWVGLPLAGVETRL 306 (471)
T ss_pred ---------cccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCCC-CcccCCcccccCCCcEEEE
Confidence 001248999999999999999999999889999999999999876544433 2333478999999999999
Q ss_pred eecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEecc-CCeEEcCCceec
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRK-KNLIKISQGEYV 478 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~-~d~i~~~~G~~v 478 (611)
++ +++...+.+.++.|||+++|++++.||+++++.+.+.| .+|||+|||+|++++||++++.||. ||+++. +|++|
T Consensus 307 ~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~-~G~~v 384 (471)
T PRK07787 307 VD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKS-GGYRI 384 (471)
T ss_pred EC-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEee-CCEEE
Confidence 98 55543332223479999999999999999999999988 5899999999999999999999996 899996 99999
Q ss_pred CcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhC
Q 007257 479 ALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERN 555 (611)
Q Consensus 479 ~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 555 (611)
+|.+||+.|.++|.|.+++|++.++. +.+++++++.++. +. +++.++++ +
T Consensus 385 ~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~------------------~~--------~~l~~~l~-~ 437 (471)
T PRK07787 385 GAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADDV------------------AA--------DELIDFVA-Q 437 (471)
T ss_pred CHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCCC------------------CH--------HHHHHHHH-h
Confidence 99999999999999999999997754 4788888874321 11 22344443 6
Q ss_pred CCCCcceeeeEEEecCCCCCCCCccccccccchHHHHH
Q 007257 556 KLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLI 593 (611)
Q Consensus 556 ~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~ 593 (611)
.|+.+++|..+++++.. |+|++||++|++|++
T Consensus 438 ~l~~~~~P~~i~~~~~i------P~~~~GKi~r~~L~~ 469 (471)
T PRK07787 438 QLSVHKRPREVRFVDAL------PRNAMGKVLKKQLLS 469 (471)
T ss_pred hcccccCCcEEEEeccC------CCCCCccccHHHhcc
Confidence 79999999999998665 999999999999975
No 88
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-59 Score=513.41 Aligned_cols=501 Identities=22% Similarity=0.283 Sum_probs=386.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + ..+||.||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 32 ~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 102 (557)
T PRK07059 32 SFRQYADRPAFICM---G------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVN 102 (557)
T ss_pred HHHHcCCCceEEEc---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEec
Confidence 46789999999986 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcH-HHHH-------------HhhhCCCc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA-EQKE-------------MAVQTGIK 147 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~-------------~~~~~~~~ 147 (611)
++|.++.+++.++++.++++++++++.....+...... .....+++...... .... ........
T Consensus 103 v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (557)
T PRK07059 103 VNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAK--TAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPG 180 (557)
T ss_pred cCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcc--cCCceeEEecccccccccccccccccccccccccccCCCC
Confidence 99999999999999999999999987654433221111 11222222211000 0000 00000112
Q ss_pred eeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhccccccc-ccCC-CCCCcEEEEecc
Q 007257 148 PYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQ-FEDK-MTVDDVYLSFLP 225 (611)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~~-~~~~~~~l~~~p 225 (611)
...++++...............++++++++|||||||.||+|.++|.++...+......+.. .... ......+++.+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 260 (557)
T PRK07059 181 HVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALP 260 (557)
T ss_pred cccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCC
Confidence 23455554433222223345578899999999999999999999999998765443322210 0001 112457788999
Q ss_pred hhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 007257 226 LAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKY 302 (611)
Q Consensus 226 ~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (611)
++|.+++.. .+.++..|++.++.+. ++..+++.++++++|.+.++|.++..+.....
T Consensus 261 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~-------------------- 320 (557)
T PRK07059 261 LYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPD-------------------- 320 (557)
T ss_pred cHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcC--------------------
Confidence 999988764 5567778888777654 88899999999999999999999988764211
Q ss_pred HHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC
Q 007257 303 KLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE 382 (611)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~ 382 (611)
....+ +++++.++.||+++++.+.+.|.+.+++++++.||+||++.++.......
T Consensus 321 -----------------~~~~~--------~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~ 375 (557)
T PRK07059 321 -----------------FDKLD--------FSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDA 375 (557)
T ss_pred -----------------cCcCC--------chhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCC
Confidence 00011 13889999999999999999999888999999999999998766554443
Q ss_pred ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEE
Q 007257 383 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVK 461 (611)
Q Consensus 383 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~ 461 (611)
...++++|.|++++++++++ +++ .+++.|+.|||+++|+.++.||+++++.+.+.| .+|||+|||++++++||.++
T Consensus 376 ~~~~~~vG~p~~g~~v~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~ 452 (557)
T PRK07059 376 TEFSGTIGLPLPSTEVSIRD-DDG--NDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTK 452 (557)
T ss_pred CCcCCcccCccCCcEEEEEC-CCC--CCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEE
Confidence 44457899999999999998 554 456778899999999999999999999999888 68999999999999999999
Q ss_pred EEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccH
Q 007257 462 IIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLV 538 (611)
Q Consensus 462 ~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (611)
+.||.+|++++ +|++|+|.+||++|.++|+|.+++|++.++. +.++++++..+... +.
T Consensus 453 ~~GR~~~~i~~-~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~~-----------------~~- 513 (557)
T PRK07059 453 IVDRKKDMILV-SGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPAL-----------------TE- 513 (557)
T ss_pred EecccccceEE-CCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCCC-----------------CH-
Confidence 99999999997 8999999999999999999999999986654 36777777554210 11
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 539 QLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
+++.+++. +.|+.+++|..+.+++.. |+|++||++|+.|+++
T Consensus 514 -------~~l~~~~~-~~l~~~~~P~~i~~v~~~------P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 514 -------EDVKAFCK-ERLTNYKRPKFVEFRTEL------PKTNVGKILRRELRDG 555 (557)
T ss_pred -------HHHHHHHH-HhcccccCCcEEEEeccC------CCCcccceeHHHHHhh
Confidence 23444443 578999999999998665 9999999999999764
No 89
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-60 Score=516.35 Aligned_cols=501 Identities=23% Similarity=0.291 Sum_probs=383.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. + +.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 33 ~a~~~p~~~a~~~~----~-----~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 33 MASRYPEKKALHFL----G-----KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred HHHHCCCceEEEec----C-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 36789999999886 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcH--H-HH-----------HHhh--hCC
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA--E-QK-----------EMAV--QTG 145 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~-----------~~~~--~~~ 145 (611)
++|.++.+++.++++.++++++++++........... . .....++....... . .. .... ...
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQS-A-TKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSES 181 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccch-h-hccceeEEeccccccccccccccchhhccccccccccccc
Confidence 9999999999999999999999998765443321111 0 11112221110000 0 00 0000 000
Q ss_pred CceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCC-CCCcEEEEec
Q 007257 146 IKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKM-TVDDVYLSFL 224 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 224 (611)
.....|..+.... ..........++++++++|||||||.||+|.++|.++..........+ ... ...+++++..
T Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~----~~~~~~~~~~l~~~ 256 (563)
T PRK06710 182 ETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL----YNCKEGEEVVLGVL 256 (563)
T ss_pred chhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc----cCCCCCCceEEEeC
Confidence 0001122221111 011111122457899999999999999999999999875543222211 022 3456889999
Q ss_pred chhhHHHHHH-HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 007257 225 PLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKY 302 (611)
Q Consensus 225 p~~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (611)
|++|.+++.. +..++..|+++++.+. ++..+++.++++++|++.++|+++..+.....
T Consensus 257 p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-------------------- 316 (563)
T PRK06710 257 PFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPL-------------------- 316 (563)
T ss_pred chHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCc--------------------
Confidence 9999998865 4457889999988766 89999999999999999999999988754210
Q ss_pred HHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC
Q 007257 303 KLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE 382 (611)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~ 382 (611)
....+ ++++|.+++||+++++++.+++.+.++.++++.||+||++.++.......
T Consensus 317 -----------------~~~~~--------~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~ 371 (563)
T PRK06710 317 -----------------LKEYD--------ISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLWE 371 (563)
T ss_pred -----------------cccCC--------hhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCccccccCcccc
Confidence 00001 13889999999999999999999988999999999999998655443323
Q ss_pred ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEE
Q 007257 383 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKI 462 (611)
Q Consensus 383 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~ 462 (611)
...++++|.+.++..+++++ +++ ..+++.|+.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++
T Consensus 372 ~~~~~~~G~~~~~~~~~i~~-~~~-~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~ 449 (563)
T PRK06710 372 KRVPGSIGVPWPDTEAMIMS-LET-GEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYV 449 (563)
T ss_pred cccCCccCCCCCCCeEEEEE-CCC-CccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcCCCcEEE
Confidence 33347899999999999998 333 3567778899999999999999999999999989999999999999999999999
Q ss_pred EeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHH
Q 007257 463 IDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQ 539 (611)
Q Consensus 463 ~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (611)
.||.||+|++ +|.+|+|.+||+.|.++|.|.+++|++.++. +.+++++++.++.. . +
T Consensus 450 ~GR~dd~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--------~--------~--- 509 (563)
T PRK06710 450 KDRKKDMIVA-SGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTE--------C--------S--- 509 (563)
T ss_pred eeccccEEEE-CCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCC--------C--------C---
Confidence 9999999997 8999999999999999999999999997654 47888888765420 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 540 LQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 540 ~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.+++.++++ +.|+.+++|..+.++++. |+|++||++|++|+++++.
T Consensus 510 -----~~~l~~~~~-~~l~~~~~P~~~~~v~~i------P~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 510 -----EEELNQFAR-KYLAAYKVPKVYEFRDEL------PKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred -----HHHHHHHHH-HhcccccCCcEEEEcccC------CCCccchhhHHHHHHHHhh
Confidence 123444443 679999999999988765 9999999999999988754
No 90
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.7e-60 Score=499.70 Aligned_cols=427 Identities=20% Similarity=0.230 Sum_probs=346.1
Q ss_pred eEEeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEE
Q 007257 26 VWKTYKEVYEEVLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVF 104 (611)
Q Consensus 26 ~~~Ty~ql~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li 104 (611)
.-|.|+||.+++.++|.+|.+.|+ .+|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.+++++++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred eecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 457899999999999999999988 5799999999999999999999999999999999999999999999999999999
Q ss_pred EcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCC
Q 007257 105 VQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSG 184 (611)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG 184 (611)
++++..... .... . . ......++++++++|||||||
T Consensus 98 ~~~~~~~~~----------------~~~~----------------~---------~---~~~~~~~~~~~~i~~TSGTTG 133 (452)
T PRK07445 98 GLDQLKLSH----------------PPPL----------------P---------S---QGILPNLETGWIMIPTGGSSG 133 (452)
T ss_pred ecCcccccc----------------CCCC----------------C---------c---cccCCCCCCcEEEEeCCCCCC
Confidence 876422100 0000 0 0 001235688999999999999
Q ss_pred CCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC-ChHHHHHHHhhhc
Q 007257 185 DPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-DLNALRDDLMELK 263 (611)
Q Consensus 185 ~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~ 263 (611)
.||+|++||+++...+......+ ++.. ++.++.+|++|.+|+...+.++..|+++++.+. ...........++
T Consensus 134 ~PKgV~~t~~~l~~~~~~~~~~~-----~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~ 207 (452)
T PRK07445 134 QIRFAIHTWETLTASVQGFQRYF-----QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPS 207 (452)
T ss_pred CCcEEEechHHHHHHHHHHHHHh-----cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcC
Confidence 99999999999988777655544 4443 467889999999999878888999999998874 2222233445788
Q ss_pred CeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEec
Q 007257 264 PTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGG 343 (611)
Q Consensus 264 ~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 343 (611)
+|+++++|++++.+.+... ..++++|.+++||
T Consensus 208 ~t~~~~vP~~l~~l~~~~~------------------------------------------------~~l~~l~~i~~gG 239 (452)
T PRK07445 208 DFFLSLVPTQLQRLLQLRP------------------------------------------------QWLAQFRTILLGG 239 (452)
T ss_pred ceEEEehHHHHHHHHhhCh------------------------------------------------hhhhcceEEEECC
Confidence 9999999999998764100 0014899999999
Q ss_pred CCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC-ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEe
Q 007257 344 APLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVR 422 (611)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~-~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~ 422 (611)
++++++..+.+.. +++++++.||+||++..+....+.. ....+++|+|+|++++++++ ++.|||+|+
T Consensus 240 ~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~-----------g~~Gel~v~ 307 (452)
T PRK07445 240 APAWPSLLEQARQ-LQLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPA-----------NQTGNITIQ 307 (452)
T ss_pred ccCCHHHHHHHHh-cCCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcC-----------CCcceEEEe
Confidence 9999999988876 4899999999999986654433322 22346899999999999872 347999999
Q ss_pred cCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecC
Q 007257 423 GKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDS 502 (611)
Q Consensus 423 ~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~ 502 (611)
|+.++.||++++.. .+|||+|||+|++|+||++++.||.||+|++ +|++|+|.+||++|.+||+|.+|+|++.+
T Consensus 308 g~~~~~gY~~~~~~-----~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~-~G~~V~p~eIE~~l~~~p~V~~a~V~g~~ 381 (452)
T PRK07445 308 AQSLALGYYPQILD-----SQGIFETDDLGYLDAQGYLHILGRNSQKIIT-GGENVYPAEVEAAILATGLVQDVCVLGLP 381 (452)
T ss_pred CCccchhhcCCccC-----CCCEEECCCEEEEcCCCCEEEEeecCCEEEE-CCEEECHHHHHHHHHhCCCcceEEEEecc
Confidence 99999999986431 3789999999999999999999999999996 99999999999999999999999999987
Q ss_pred CC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCc
Q 007257 503 LK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDL 579 (611)
Q Consensus 503 ~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P 579 (611)
+. +.++|++++.++.. + .+++.++++ ++|+.|++|+.++++++. |
T Consensus 382 ~~~~g~~~~a~vv~~~~~~-----------------~--------~~~l~~~~~-~~L~~~~~P~~i~~v~~l------P 429 (452)
T PRK07445 382 DPHWGEVVTAIYVPKDPSI-----------------S--------LEELKTAIK-DQLSPFKQPKHWIPVPQL------P 429 (452)
T ss_pred CcCCCcEEEEEEEeCCCCC-----------------C--------HHHHHHHHH-HhCCcccCCeEEEEecCC------C
Confidence 65 37888888765310 1 123444443 679999999999998765 9
Q ss_pred cccccccchHHHHHHHHHHHH
Q 007257 580 VTATLKKKRNKLLIYYQVEID 600 (611)
Q Consensus 580 ~t~~GKv~R~~l~~~~~~~~~ 600 (611)
+|++||++|++|+++++++|+
T Consensus 430 ~t~~GKi~r~~L~~~~~~~~~ 450 (452)
T PRK07445 430 RNPQGKINRQQLQQIAVQRLG 450 (452)
T ss_pred CCCCcccCHHHHHHHHHHhhC
Confidence 999999999999999988774
No 91
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-60 Score=520.94 Aligned_cols=487 Identities=20% Similarity=0.232 Sum_probs=373.0
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+++++||++|+++. + +.+||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 46 ~a~~~p~~~Ai~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~ 116 (600)
T PRK08279 46 AAARHPDRPALLFE---D------QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVAL 116 (600)
T ss_pred HHHhCCCCcEEEeC---C------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEee
Confidence 56789999999986 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.++++++|++++....+...... ......++..++.... ....|.++.......
T Consensus 117 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 185 (600)
T PRK08279 117 LNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARAD-LARPPRLWVAGGDTLD----------DPEGYEDLAAAAAGA 185 (600)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhh-hcccceEEEecCcccc----------ccccHHHHhhhcccC
Confidence 99999999999999999999999998766554332211 1222233333221100 011233333222111
Q ss_pred ----CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHH
Q 007257 162 ----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEY 237 (611)
Q Consensus 162 ----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 237 (611)
........++++++++|||||||.||+|.+||.++.+.+..+...+ ++..+|++++.+|++|.+++...+.
T Consensus 186 ~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~l~~~d~~l~~~pl~h~~g~~~~~~ 260 (600)
T PRK08279 186 PTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-----RLTPDDVLYCCLPLYHNTGGTVAWS 260 (600)
T ss_pred CccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-----CCCCCcEEEEecCchhhhhHHHHHH
Confidence 1112334678999999999999999999999999999888776665 7889999999999999999887555
Q ss_pred -HhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007257 238 -FFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQRE 315 (611)
Q Consensus 238 -~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (611)
++..|+++++.+. ++..+++.++++++|++.++|++++.+........
T Consensus 261 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~------------------------------ 310 (600)
T PRK08279 261 SVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPT------------------------------ 310 (600)
T ss_pred HHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCcc------------------------------
Confidence 5778888888766 89999999999999999999999987764211000
Q ss_pred cchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCC-ceeeccccCCCCCceeeccCCCccccCccCCCcc
Q 007257 316 ASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSV 394 (611)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~ 394 (611)
....+++.+ +|+.+++++.+.|.+.++. .+++.||+||++..+... ....+++|.+.+
T Consensus 311 ---------------~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~----~~~~~~~g~~~~ 369 (600)
T PRK08279 311 ---------------DRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV----FNFDGTVGRVPL 369 (600)
T ss_pred ---------------ccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc----CCCCcccccccc
Confidence 001366654 4778999999999998875 599999999998644322 122356676555
Q ss_pred ----Cee---------EEEeecCCCCCCCCCCCCCcEEE--EecCCcccccCCChHhhhhhc-------cCCccccCceE
Q 007257 395 ----YSE---------LRLEEVPEMGYSPLDDPPCGEVC--VRGKTLFSGYYKNPDLTRESI-------IDGWFHTGDIG 452 (611)
Q Consensus 395 ----~~~---------v~i~~~~~~~~~~~~~~~~Gel~--v~~~~~~~gy~~~~~~~~~~~-------~~g~~~TGD~~ 452 (611)
+.. ..+.+ .++....++.++.|||+ +.+++++.|| ++++.+.+.| .++||+|||+|
T Consensus 370 ~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg 447 (600)
T PRK08279 370 WLAHPYAIVKYDVDTGEPVRD-ADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLM 447 (600)
T ss_pred cccccceeeeeccCcCceeeC-CCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceE
Confidence 222 22233 33333456778899998 6799999999 8888887765 25799999999
Q ss_pred EEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC----CeEEEEEecChHHHHHHHHHCCCC
Q 007257 453 QILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK----SMLVAVVVPCEEDTKKWAYSNGHA 528 (611)
Q Consensus 453 ~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~----~~~~a~vv~~~~~~~~~~~~~~~~ 528 (611)
++++||++++.||.||+|++ +|++|+|.+||++|.+||+|.+|+|++.++. ...+++++..++. ..
T Consensus 448 ~~~~dG~l~~~GR~~d~ik~-~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~--------~~- 517 (600)
T PRK08279 448 RDDGFGHAQFVDRLGDTFRW-KGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGA--------EF- 517 (600)
T ss_pred EEcCCccEEEecccCCeEEE-CCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCc--------cC-
Confidence 99999999999999999997 8999999999999999999999999986532 2344555544321 00
Q ss_pred CcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 529 GSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
+ .+++.++++ .+||.|++|+.++++++. |+|.+||++|++|++++.+.
T Consensus 518 -------~--------~~~l~~~l~-~~L~~~~~P~~i~~v~~l------P~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 518 -------D--------LAALAAHLY-ERLPAYAVPLFVRLVPEL------ETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred -------C--------HHHHHHHHH-hhCccccCCeEEEeecCC------CCCcchhhhHHHHhhcCCCc
Confidence 1 124445554 679999999999999765 99999999999999877543
No 92
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.7e-59 Score=512.25 Aligned_cols=500 Identities=23% Similarity=0.311 Sum_probs=384.0
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+++++|+++|+++. + +.+||.||.+++.++|.+|. +.|+++||+|+++++|++++++++|||+++|++++
T Consensus 34 ~~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 104 (560)
T PRK08751 34 SVAKFADRPAYHSF----G-----KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVV 104 (560)
T ss_pred HHHhCCCCceEEEC----C-----ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEe
Confidence 46789999999875 3 68999999999999999997 57999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcH--------------HHHHHh-hhCC
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA--------------EQKEMA-VQTG 145 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------~~~~~~-~~~~ 145 (611)
|++|.++.+++.+++++++++++++++.....+...... .+ ...++....... ...... .-..
T Consensus 105 ~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (560)
T PRK08751 105 NVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIAD-TP-VKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRI 182 (560)
T ss_pred ccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhC-CC-ccEEEEechhhhcccccchhhhhhhhhhhccccccCC
Confidence 999999999999999999999999988765443322211 11 222222210000 000000 0000
Q ss_pred CceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCC-CcEEEEec
Q 007257 146 IKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTV-DDVYLSFL 224 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 224 (611)
.....+.+................++++++++|||||||.||+|.++|.++...+......+... ..+.. .+++++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 261 (560)
T PRK08751 183 NGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGT-GKLEEGCEVVITAL 261 (560)
T ss_pred CccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccc-cccCCCCceEEEec
Confidence 11233444443332222223345678999999999999999999999999987766544333110 01233 36778889
Q ss_pred chhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 007257 225 PLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYK 301 (611)
Q Consensus 225 p~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 301 (611)
|++|.+++.. .+.++..|++++++.. ++..+++.++++++|++.++|.++..+.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------------------- 322 (560)
T PRK08751 262 PLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPG------------------- 322 (560)
T ss_pred ChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcC-------------------
Confidence 9999999865 4455667777766543 88999999999999999999999988764210
Q ss_pred HHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCC
Q 007257 302 YKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD 381 (611)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~ 381 (611)
.+..++ +++|.+++||+++++.+.+.|++.+|+++++.||+||++..++.+...
T Consensus 323 ------------------~~~~~l--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~ 376 (560)
T PRK08751 323 ------------------FDQIDF--------SSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLT 376 (560)
T ss_pred ------------------cCCcch--------hhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceeccccc
Confidence 011111 389999999999999999999998899999999999999877665543
Q ss_pred CccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeE
Q 007257 382 EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVV 460 (611)
Q Consensus 382 ~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l 460 (611)
.....+++|.+++++++++.+ +++ .+++.++.|||+++|+.++.||+++++.+.+.| .+|||+|||+|+++++|++
T Consensus 377 ~~~~~~~vG~~~~~~~v~i~d-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l 453 (560)
T PRK08751 377 LKEYNGSIGLPIPSTDACIKD-DAG--TVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFV 453 (560)
T ss_pred ccccCCCcCccCCCceEEEEC-CCC--CCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceE
Confidence 334457899999999999998 554 455677899999999999999999999998888 6899999999999999999
Q ss_pred EEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhcc
Q 007257 461 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSL 537 (611)
Q Consensus 461 ~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (611)
++.||.+|+|++ +|.+|+|.+||+.|..+|+|.+|+|++.++. +.+.++++..... . +
T Consensus 454 ~i~GR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~~---------~--------~- 514 (560)
T PRK08751 454 YIVDRKKDMILV-SGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDPA---------L--------T- 514 (560)
T ss_pred EEEeechhheeE-CCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCCC---------C--------C-
Confidence 999999999997 8999999999999999999999999997654 3566666654311 0 1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 538 VQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 538 ~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
.+++++.++ ..++.+++|..+.+++.. |+|++||++|++|++.
T Consensus 515 -------~~~l~~~~~-~~l~~~~~P~~v~~v~~l------P~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 515 -------AEDVKAHAR-ANLTGYKQPRIIEFRKEL------PKTNVGKILRRELRDA 557 (560)
T ss_pred -------HHHHHHHHH-HhhhhccCCeEEEEhhhC------CCCccccccHHHHHHh
Confidence 123344443 568999999999998665 9999999999999875
No 93
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-59 Score=507.65 Aligned_cols=468 Identities=22% Similarity=0.238 Sum_probs=371.3
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 44 ~a~~~p~~~a~~~~---~------~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vp 114 (516)
T PRK13383 44 TAARWPGRTAIIDD---D------GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVP 114 (516)
T ss_pred HHHHCCCCcEEEeC---C------CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEE
Confidence 46789999999865 2 48999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.++++++++++.....+.... ..++.++.... ...
T Consensus 115 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~~~-----------------~~~------ 164 (516)
T PRK13383 115 ISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD-------DAVAVIDPATA-----------------GAE------ 164 (516)
T ss_pred cCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh-------cceEEeccchh-----------------hhh------
Confidence 999999999999999999999999887655432210 11222221100 000
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
.....+...++.++++|||||||.||+|.++|.... ........+. ..++..++++++..|++|.+++...+.++..
T Consensus 165 ~~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~-~~~~~~~~~~--~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~ 241 (516)
T PRK13383 165 ESGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRS-AVGVWVTILD--RTRLRTGSRISVAMPMFHGLGLGMLMLTIAL 241 (516)
T ss_pred cCCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhh-hhhhHHhHHh--hhccCCCCeEEEecCCcchhhHHHHHHHHhc
Confidence 000112234567899999999999999999997432 1111111111 1156788999999999999999877778899
Q ss_pred CceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|+++++... ++..+++.++++++|.+.++|.++..+........
T Consensus 242 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~----------------------------------- 286 (516)
T PRK13383 242 GGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVR----------------------------------- 286 (516)
T ss_pred CCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccccc-----------------------------------
Confidence 999988765 99999999999999999999999988764221100
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
....++++|.+++||+++++++.++|.+.+|.++++.||+||++..+...........+++|.|+++++++|
T Consensus 287 --------~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i 358 (516)
T PRK13383 287 --------ARNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRI 358 (516)
T ss_pred --------ccCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCCCcEEEE
Confidence 000124899999999999999999999999999999999999987665544333344578999999999999
Q ss_pred eecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCc
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVAL 480 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~ 480 (611)
++ +++ .+++.++.|||+++|+.++.||++++. ..+.+|||+|||+|++|++|++++.||.+|+|++ +|.+|+|
T Consensus 359 ~d-~~~--~~~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~-~G~~v~~ 431 (516)
T PRK13383 359 LD-RNN--RPVGPRVTGRIFVGGELAGTRYTDGGG---KAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIIS-GGENVYP 431 (516)
T ss_pred EC-CCC--CCCCCCCceEEEEecCcccccccCCch---hheecCceecceeEEEcCCccEEEeccccceEEE-CCEEECH
Confidence 98 554 456678899999999999999998753 3346899999999999999999999999999997 9999999
Q ss_pred HHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCC
Q 007257 481 EYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKL 557 (611)
Q Consensus 481 ~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 557 (611)
.+||+.|.+||.|.++++++.++. +.+.++|++++... . + .++++++++ +++
T Consensus 432 ~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~--------~--------~--------~~~l~~~~~-~~l 486 (516)
T PRK13383 432 RAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSG--------V--------D--------AAQLRDYLK-DRV 486 (516)
T ss_pred HHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCC--------C--------C--------HHHHHHHHH-Hhc
Confidence 999999999999999999997644 47888888765320 0 1 123444443 668
Q ss_pred CCcceeeeEEEecCCCCCCCCccccccccchHHHH
Q 007257 558 RGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLL 592 (611)
Q Consensus 558 ~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~ 592 (611)
+.|++|..+.++++. |+|++||++|++|.
T Consensus 487 ~~~~~p~~i~~v~~i------P~t~~gKi~r~~L~ 515 (516)
T PRK13383 487 SRFEQPRDINIVSSI------PRNPTGKVLRKELP 515 (516)
T ss_pred ccCCCCcEEEEeCCC------CCCCCCcCcHHHhC
Confidence 899999999999765 99999999999873
No 94
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=5.7e-60 Score=563.81 Aligned_cols=471 Identities=21% Similarity=0.244 Sum_probs=385.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||+||.++++++|+.|.+.|+++|++|++++++++++++++|||+++|++++|
T Consensus 467 ~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vp 537 (1296)
T PRK10252 467 QAAKTPDAPALADA---R------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLP 537 (1296)
T ss_pred HHHhCCCCeEEEcC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 46789999999986 3 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++.++++.+++++++++......+... +.. .++..+. .... ..
T Consensus 538 ld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~-~~~~~~~---------------------~~~~--~~ 588 (1296)
T PRK10252 538 LDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV-----PDL-TSLCYNA---------------------PLAP--QG 588 (1296)
T ss_pred cCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC-----CCc-eeeeccc---------------------cccc--cc
Confidence 99999999999999999999999987655433211 000 0111100 0000 00
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||||+++|+++.+.+......+ ++..+|++++..|++|..++..++.++..
T Consensus 589 ~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~l~~ 663 (1296)
T PRK10252 589 AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-----PLTADDVVLQKTPCSFDVSVWEFFWPFIA 663 (1296)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEEEEeCCcchhhhHHHHHHHHhC
Confidence 1111223678999999999999999999999999999988877766 78899999999999999998888889999
Q ss_pred CceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 242 GASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 242 G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
|+++++.+. ++..+++.++++++|++.++|+++..+.+.......
T Consensus 664 G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~------------------------------- 712 (1296)
T PRK10252 664 GAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGA------------------------------- 712 (1296)
T ss_pred CCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccc-------------------------------
Confidence 999999763 889999999999999999999999887653211000
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC------ccccCccCC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE------MCMVGTAGP 391 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~------~~~~~~~G~ 391 (611)
...++++|.+++||+++++++.+.|.+.++++++|.||+||++..++...... .....++|.
T Consensus 713 ------------~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~ 780 (1296)
T PRK10252 713 ------------RQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGY 780 (1296)
T ss_pred ------------cccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCccc
Confidence 00114899999999999999999999888999999999999987666543221 223367899
Q ss_pred CccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc-------CCccccCceEEEccCCeEEEEe
Q 007257 392 VSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII-------DGWFHTGDIGQILPNGVVKIID 464 (611)
Q Consensus 392 ~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------~g~~~TGD~~~~~~dG~l~~~G 464 (611)
|+++++++|+| +++ .+++.|+.|||+|+|++++.||+++++.|.+.|. ++||+|||+|++++||.++++|
T Consensus 781 p~~~~~~~i~d-~~~--~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~G 857 (1296)
T PRK10252 781 PVWNTGLRILD-ARM--RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLG 857 (1296)
T ss_pred ccCCCEEEEEC-CCC--CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEec
Confidence 99999999998 544 4567788999999999999999999999999882 2499999999999999999999
Q ss_pred ccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEec---------CCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHh
Q 007257 465 RKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGD---------SLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELC 535 (611)
Q Consensus 465 R~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~---------~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~ 535 (611)
|.||+||+ +|++|++.+||++|.+||+|.+++|+.. .+.+.+++++++..+.. .
T Consensus 858 R~d~~ik~-~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~--------~-------- 920 (1296)
T PRK10252 858 RSDDQLKI-RGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLP--------L-------- 920 (1296)
T ss_pred ccCCeEEE-eeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCC--------C--------
Confidence 99999998 9999999999999999999999987643 11237999999765320 0
Q ss_pred ccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHH
Q 007257 536 SLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLI 593 (611)
Q Consensus 536 ~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~ 593 (611)
+ .+.|+++++ .+||.|++|..++.+++. |+|++||++|++|.+
T Consensus 921 ~--------~~~l~~~l~-~~Lp~~~~P~~~~~~~~l------P~t~~GKidr~~L~~ 963 (1296)
T PRK10252 921 D--------TSALQAQLR-ERLPPHMVPVVLLQLDQL------PLSANGKLDRKALPL 963 (1296)
T ss_pred C--------HHHHHHHHH-hhCchhcCCcEEEEecCC------CCCCCcChhHHhcCC
Confidence 1 123444443 689999999999988665 999999999999965
No 95
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-60 Score=607.31 Aligned_cols=490 Identities=21% Similarity=0.219 Sum_probs=396.0
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||+||.++++++|++|.+.|+++|++|++++++++++++++|||+++|++++|
T Consensus 1583 ~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vp 1653 (3956)
T PRK12467 1583 QAAATPEAVALVFG---E------QELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYVP 1653 (3956)
T ss_pred HHHhCCCCeEEEeC---C------cEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCceeee
Confidence 57889999999986 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++.++++++++++++++......+... ... .++.++.... +.... ..
T Consensus 1654 ldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-----~~~-~~~~~~~~~~------------------~~~~~-~~ 1708 (3956)
T PRK12467 1654 LDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP-----DGL-RSLVLDQEDD------------------WLEGY-SD 1708 (3956)
T ss_pred cCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc-----cCC-cEEEeccccc------------------hhccC-CC
Confidence 99999999999999999999999987654432110 111 2222222110 00000 11
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||||+++|+++.+.+......+ ++..++++++..|++|..++..++.++..
T Consensus 1709 ~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~L~~ 1783 (3956)
T PRK12467 1709 SNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-----QLSAADVVLQFTSFAFDVSVWELFWPLIN 1783 (3956)
T ss_pred CCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-----CCCcccEEEEecCccHHHHHHHHHHHHhC
Confidence 1222345688999999999999999999999999999888876666 78889999999999999998888889999
Q ss_pred CceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 242 GASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 242 G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
|+++++.+. ++..+++.|+++++|++.++|++++.|.+....
T Consensus 1784 G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~---------------------------------- 1829 (3956)
T PRK12467 1784 GARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQ---------------------------------- 1829 (3956)
T ss_pred CCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccc----------------------------------
Confidence 999999864 789999999999999999999999988652100
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCC----CccccCccCCC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD----EMCMVGTAGPV 392 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~----~~~~~~~~G~~ 392 (611)
...+++||.+++||++++++..+.|.+.+ +..++|.||+||++..++..... ......++|+|
T Consensus 1830 ------------~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p 1897 (3956)
T PRK12467 1830 ------------VEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQP 1897 (3956)
T ss_pred ------------cccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccc
Confidence 00124899999999999999999988776 57899999999999766643322 11223689999
Q ss_pred ccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc--------CCccccCceEEEccCCeEEEEe
Q 007257 393 SVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--------DGWFHTGDIGQILPNGVVKIID 464 (611)
Q Consensus 393 ~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~dG~l~~~G 464 (611)
+++++++|.| +++ .+++.|+.|||+|+|++++.||+++++.|.+.|. ++||+|||+|++++||.++++|
T Consensus 1898 ~~~~~~~vld-~~~--~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~G 1974 (3956)
T PRK12467 1898 IANLSTYILD-ASL--NPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLG 1974 (3956)
T ss_pred cCCCEEEEEC-CCC--CCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEec
Confidence 9999999988 544 4667788999999999999999999999999882 2499999999999999999999
Q ss_pred ccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCC--CCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHH
Q 007257 465 RKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSL--KSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQN 542 (611)
Q Consensus 465 R~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~--~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (611)
|.||+||+ +|++|+|.|||++|.+||+|.+|+|++.++ .+.++|++++..+... ...+..+
T Consensus 1975 R~D~qVki-~G~rIel~eIE~~l~~~p~V~~a~vv~~~~~~~~~lva~vv~~~~~~~----------------~~~~~~~ 2037 (3956)
T PRK12467 1975 RIDHQVKI-RGFRIELGEIEARLREQGGVREAVVIAQDGANGKQLVAYVVPTDPGLV----------------DDDEAQV 2037 (3956)
T ss_pred ccCceEEe-CeEEechHHHHHHHHhCCCcceEEEEEecCCCCcEEEEEEEecCcccc----------------ccccccc
Confidence 99999998 899999999999999999999999998653 2589999997654210 0001111
Q ss_pred HHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHHHHHH
Q 007257 543 YILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEIDQLY 603 (611)
Q Consensus 543 ~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~~~~y 603 (611)
...+.|+++++ ..||.|++|..+++++.. |+|++||++|++|.+.+...++..|
T Consensus 2038 ~~~~~l~~~l~-~~Lp~ymvP~~~~~l~~l------P~t~~GKidr~~L~~~~~~~~~~~~ 2091 (3956)
T PRK12467 2038 ALRAILKNHLK-ASLPEYMVPAHLVFLARM------PLTPNGKLDRKALPAPDASELQQAY 2091 (3956)
T ss_pred ccHHHHHHHHH-hhCchhhCchhhhhhhcC------CCCCCCCcchhhCCCCccccccccc
Confidence 22345666664 789999999999998665 9999999999999775544433333
No 96
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-58 Score=500.19 Aligned_cols=493 Identities=20% Similarity=0.180 Sum_probs=385.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. ++. +.+||.||.+++.++|++|.+.|+++|++|+++++|++++++++|||+++|+++++
T Consensus 6 ~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~ 78 (511)
T PRK13391 6 HAQTTPDKPAVIMA---STG----EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTC 78 (511)
T ss_pred hHhhCCCceEEEec---CCC----CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEec
Confidence 57889999999874 221 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++.+++++++++............ ........+....... ......+.+......
T Consensus 79 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-- 146 (511)
T PRK13391 79 VNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLK-QCPGVRHRLVLDGDGE---------LEGFVGYAEAVAGLP-- 146 (511)
T ss_pred cccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHh-cCCCceEEEEecCCCC---------CcccccHHHHhcCCC--
Confidence 9999999999999999999999999876554322211 1223333333332110 011223333322111
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeec--cHhHHHhh---hhcccccccccCCCCCCcEEEEecchhhHHHHHHHH
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLT--HETIATFV---SGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEE 236 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s--~~~l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~ 236 (611)
.......++.++++|||||||.||+|.++ |.++.... ......+ .+..++++++..|++|.+++...+
T Consensus 147 --~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~~~ 219 (511)
T PRK13391 147 --ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-----GFRSDMVYLSPAPLYHSAPQRAVM 219 (511)
T ss_pred --CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-----CCCCCCeEEEcCCHHHHHHHHHHH
Confidence 01112344678999999999999999964 55543322 2222222 567889999999999999988777
Q ss_pred HHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007257 237 YFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQRE 315 (611)
Q Consensus 237 ~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (611)
.++..|+++++.+. ++..+++.++++++|++.++|+++..+.+......
T Consensus 220 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~------------------------------ 269 (511)
T PRK13391 220 LVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVR------------------------------ 269 (511)
T ss_pred HHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhc------------------------------
Confidence 78899999998876 99999999999999999999999988764211100
Q ss_pred cchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccC
Q 007257 316 ASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVY 395 (611)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~ 395 (611)
+ ...+++++.+++||+++++++.+.+.+.+|..+++.||+||++++............+++|.++++
T Consensus 270 -----~--------~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g 336 (511)
T PRK13391 270 -----D--------KYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG 336 (511)
T ss_pred -----c--------cCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcccc
Confidence 0 011248999999999999999999999889999999999999987665443333445789999999
Q ss_pred eeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-c-CCccccCceEEEccCCeEEEEeccCCeEEcC
Q 007257 396 SELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-I-DGWFHTGDIGQILPNGVVKIIDRKKNLIKIS 473 (611)
Q Consensus 396 ~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~-~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~ 473 (611)
++++++ +++ .+++.|+.|||+++|+ ++.||+++++.+.+.+ . ++||+|||+|+++++|.+++.||.+|++++
T Consensus 337 -~~~i~d-~~~--~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~- 410 (511)
T PRK13391 337 -DLHILD-DDG--AELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIIS- 410 (511)
T ss_pred -eEEEEC-CCC--CCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEe-
Confidence 688887 444 4556778999999999 8889999999998888 3 389999999999999999999999999996
Q ss_pred CceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHH
Q 007257 474 QGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKN 550 (611)
Q Consensus 474 ~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 550 (611)
+|.++++.+||++|.+||.|.+|+|++.++. +.+++++++.++.. .. +.+.+.+.+
T Consensus 411 ~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~-----------------~~----~~~~~~l~~ 469 (511)
T PRK13391 411 GGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVD-----------------PG----PALAAELIA 469 (511)
T ss_pred CCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCC-----------------cc----cchHHHHHH
Confidence 9999999999999999999999999987655 36778887765320 01 112234555
Q ss_pred HHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 551 AAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 551 ~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+++ ..||.|+.|..|.++++. |+|++||++|+.|++.|..
T Consensus 470 ~~~-~~l~~~~~P~~i~~~~~~------P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 470 FCR-QRLSRQKCPRSIDFEDEL------PRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred HHH-hhcccCcCCcEEEEeecC------CCCCccceeHHHHHHHhhc
Confidence 554 789999999999998765 9999999999999998753
No 97
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-59 Score=507.94 Aligned_cols=501 Identities=21% Similarity=0.239 Sum_probs=384.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+.+||++|+.+. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 42 ~a~~~p~~~al~~~---~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 112 (567)
T PRK06178 42 WARERPQRPAIIFY---G------HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHVP 112 (567)
T ss_pred HHHHCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEee
Confidence 46779999999876 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHH-------HhhhCCCceeeHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKE-------MAVQTGIKPYSWDEF 154 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 154 (611)
++|.++..++.++++.++++++++++.....+....... ....++........... ...........+.++
T Consensus 113 l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (567)
T PRK06178 113 VSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--SLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDL 190 (567)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--CcceEEEeccccccccccccccccccccccccccccccH
Confidence 999999999999999999999999987766553322211 22333332211100000 000000000112222
Q ss_pred Hhcccc--cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHH
Q 007257 155 LHLGKV--NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR 232 (611)
Q Consensus 155 ~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~ 232 (611)
...... .........++++++++|||||||.||+|.+||.++...+....... ..+..++++++.+|++|.+|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~g~ 266 (567)
T PRK06178 191 LPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA----VVGGEDSVFLSFLPEFWIAGE 266 (567)
T ss_pred HHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh----ccCCCCcEEEEecchHHHHHH
Confidence 221111 11122345678999999999999999999999999887655433221 156788999999999999998
Q ss_pred HH-HHHHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhc
Q 007257 233 VI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMG 310 (611)
Q Consensus 233 ~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (611)
.. ++.++..|+++++.+. ++..++..++++++|.+.++|..+..+.....
T Consensus 267 ~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~---------------------------- 318 (567)
T PRK06178 267 NFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR---------------------------- 318 (567)
T ss_pred HHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC----------------------------
Confidence 64 6667999999999886 89999999999999999999998877654110
Q ss_pred CCCCCcchHHHHHhhHHHHHHcCCceeEEE--EecCCCCHHHHHHHHHHcCCceee-ccccCCCCCceeeccC--CC---
Q 007257 311 YKQREASPLADLLAFRKVKARLGGRLRLVI--SGGAPLSTEVEEFLRVTCCAFLVQ-GYGLTETCGPTTVCFP--DE--- 382 (611)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~~G~~l~~~~~~~~~~~~~~~v~~-~yG~tE~g~~~~~~~~--~~--- 382 (611)
....+ +++++.+. +.|+.++++..+.|++.+|..++. .||+||+++.+..... ..
T Consensus 319 ---------~~~~~--------l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~ 381 (567)
T PRK06178 319 ---------FAEYD--------LSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFD 381 (567)
T ss_pred ---------CCCCC--------cchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccc
Confidence 00011 12566544 446899999999999988877765 7999999876544321 11
Q ss_pred -ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEE
Q 007257 383 -MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVK 461 (611)
Q Consensus 383 -~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~ 461 (611)
...++++|.|+++++++++| ++ ...+++.++.|||+++|++++.||+++++.+...|.+|||+|||++++++||+++
T Consensus 382 ~~~~~~~vG~p~~g~~v~v~d-~~-~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~ 459 (567)
T PRK06178 382 LLSQPVFVGLPVPGTEFKICD-FE-TGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLH 459 (567)
T ss_pred cccCCcccccccCCcEEEEEc-CC-CCCcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEecCCeEE
Confidence 12346789999999999998 33 2355677889999999999999999999999988889999999999999999999
Q ss_pred EEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccH
Q 007257 462 IIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLV 538 (611)
Q Consensus 462 ~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (611)
+.||.+|+|++ +|.+|+|.+||+++.++|+|.+++|++.++. +.+++++++++... . +
T Consensus 460 i~GR~~d~i~~-~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--------~--------~-- 520 (567)
T PRK06178 460 YLGRRKEMLKV-NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGAD--------L--------T-- 520 (567)
T ss_pred EEecccccEEE-CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCc--------C--------C--
Confidence 99999999997 8999999999999999999999999987654 47888888765320 0 1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 539 QLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 539 ~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.++|.++++ ++++.+++|. +.++++. |+|++||++|++|++++++
T Consensus 521 ------~~~l~~~~~-~~l~~~~~p~-i~~v~~i------P~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 521 ------AAALQAWCR-ENMAVYKVPE-IRIVDAL------PMTATGKVRKQDLQALAEE 565 (567)
T ss_pred ------HHHHHHHHH-hcCcccCCce-EEEeccC------CCCCccceeHHHHHHHHHh
Confidence 123444443 6799999996 7776554 9999999999999998865
No 98
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.9e-60 Score=612.82 Aligned_cols=473 Identities=20% Similarity=0.199 Sum_probs=393.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 520 ~a~~~p~~~A~~~~---~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~vp 590 (5163)
T PRK12316 520 QVERTPEAPALAFG---E------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYVP 590 (5163)
T ss_pred HHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEec
Confidence 57899999999986 3 69999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++.++++.+++++++++......+.. .....++.++.... ..... ..
T Consensus 591 ld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~------------------~~~~~-~~ 645 (5163)
T PRK12316 591 LDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL------AAGVQVLDLDRPAA------------------WLEGY-SE 645 (5163)
T ss_pred cCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc------ccCceEEEecCcch------------------hhccC-CC
Confidence 9999999999999999999999998765443211 10112233322110 00000 11
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||||+++|+++.+.+.+....+ ++..++++++..|++|..++...+.++..
T Consensus 646 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~fd~~~~~~~~~L~~ 720 (5163)
T PRK12316 646 ENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-----GLGVGDTVLQKTPFSFDVSVWEFFWPLMS 720 (5163)
T ss_pred CCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-----CCCCCCEEEeeCCeehHHHHHHHHHHHhC
Confidence 1222345688999999999999999999999999999988877766 78899999999999999998888889999
Q ss_pred CceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 242 GASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 242 G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
|+++++.+. ++..+++.++++++|++.++|++++.|.+....
T Consensus 721 G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~---------------------------------- 766 (5163)
T PRK12316 721 GARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDV---------------------------------- 766 (5163)
T ss_pred CCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcccc----------------------------------
Confidence 999999853 899999999999999999999999988642100
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccC-CCccccCccCCCccC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFP-DEMCMVGTAGPVSVY 395 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~-~~~~~~~~~G~~~~~ 395 (611)
..++++|.+++||+++++++.+.|.+.+ +++++|.||+||++..++.... .......++|+|+++
T Consensus 767 -------------~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~ 833 (5163)
T PRK12316 767 -------------ASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIAN 833 (5163)
T ss_pred -------------ccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCC
Confidence 0124899999999999999999987665 7899999999999865443322 222334689999999
Q ss_pred eeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc-------CCccccCceEEEccCCeEEEEeccCC
Q 007257 396 SELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII-------DGWFHTGDIGQILPNGVVKIIDRKKN 468 (611)
Q Consensus 396 ~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------~g~~~TGD~~~~~~dG~l~~~GR~~d 468 (611)
++++|+| +++ .+++.|+.|||+|+|++++.||+++++.|.+.|. ++||+|||+|++++||.+++.||.||
T Consensus 834 ~~~~i~d-~~~--~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~ 910 (5163)
T PRK12316 834 LACYILD-ANL--EPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDH 910 (5163)
T ss_pred CEEEEEC-CCC--CCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCC
Confidence 9999998 554 4667888999999999999999999999999882 35999999999999999999999999
Q ss_pred eEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHH
Q 007257 469 LIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSEL 548 (611)
Q Consensus 469 ~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 548 (611)
+||+ +|++|+|.|||++|.+||+|.+|+|++.+ .+.++|+|++.++.. ...+.+
T Consensus 911 ~ik~-~G~rI~~~EIE~~l~~~p~V~~a~V~~~~-~~~lva~vv~~~~~~------------------------~~~~~l 964 (5163)
T PRK12316 911 QVKL-RGLRIELGEIEARLLEHPWVREAAVLAVD-GKQLVGYVVLESEGG------------------------DWREAL 964 (5163)
T ss_pred EEEE-ceEEcChHHHHHHHHhCCCcceEEEEEcC-CCeEEEEEEccCCCC------------------------CCHHHH
Confidence 9998 89999999999999999999999999987 778999999876320 001245
Q ss_pred HHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 549 KNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 549 ~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
+++++ ..||.|++|+.|+++++. |+|++||++|++|.+.+.
T Consensus 965 ~~~l~-~~Lp~y~vP~~i~~v~~l------P~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 965 KAHLA-ASLPEYMVPAQWLALERL------PLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred HHHHH-hhCCCccCCCeEEEHhhC------CCCCCCChhHHhhcCccc
Confidence 55554 789999999999998765 999999999999987543
No 99
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=6.9e-59 Score=501.42 Aligned_cols=474 Identities=19% Similarity=0.197 Sum_probs=384.4
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+.+||++|+... + +.+||.||.+++.++|..|.+.|+++|++|+++++|+.++++++|||+++|++++|
T Consensus 11 ~a~~~p~~~~~~~~---~------~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 11 FAQTQPDFPAYDYL---G------EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred HHHhCCCceEEEeC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 57789999998865 2 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcc--c
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLG--K 159 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 159 (611)
+++.++.+++.++++..+++++++++...... ... . ...++++.... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~---------------------~~~~~~~~~~~~~~ 131 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------LGI-P---------------------VITLDELKDIFATG 131 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecccccccc--------cCC-c---------------------EEehHHhhhhhhcc
Confidence 99999999999999999999999987641000 000 1 11111111110 0
Q ss_pred ccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHh
Q 007257 160 VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFF 239 (611)
Q Consensus 160 ~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l 239 (611)
..........++++++++|||||||.||+|.++|+++...+......+ .+..++++++..|++|..++..++.++
T Consensus 132 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l 206 (503)
T PRK04813 132 NPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-----ALPEGPQFLNQAPYSFDLSVMDLYPTL 206 (503)
T ss_pred ccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHc-----CCCcCceeeecCCcchhHhHHHHHHHH
Confidence 111112345678899999999999999999999999998777665555 678899999999999999887788889
Q ss_pred hcCceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007257 240 RRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQRE 315 (611)
Q Consensus 240 ~~G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (611)
..|+++++++. ++..+++.++++++|++.++|+++..+......
T Consensus 207 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~-------------------------------- 254 (503)
T PRK04813 207 ASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSF-------------------------------- 254 (503)
T ss_pred hcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhcc--------------------------------
Confidence 99999998875 789999999999999999999998776432110
Q ss_pred cchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCC----ccccCccC
Q 007257 316 ASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE----MCMVGTAG 390 (611)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~----~~~~~~~G 390 (611)
....+++++.++++|+++++.+.+.+.+.+ ++++++.||+||++..+....... .....++|
T Consensus 255 -------------~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g 321 (503)
T PRK04813 255 -------------NEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIG 321 (503)
T ss_pred -------------CcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCccc
Confidence 011124899999999999999999999988 789999999999986554432211 22335789
Q ss_pred CCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc--C--CccccCceEEEccCCeEEEEecc
Q 007257 391 PVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--D--GWFHTGDIGQILPNGVVKIIDRK 466 (611)
Q Consensus 391 ~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~--g~~~TGD~~~~~~dG~l~~~GR~ 466 (611)
.+.+++++++++ +++ .+++.++.|||+++|+.++.||+++++.+...|. + +||+|||+|++ ++|++++.||.
T Consensus 322 ~~~~~~~~~i~d-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~ 397 (503)
T PRK04813 322 YAKPDSPLLIID-EEG--TKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRI 397 (503)
T ss_pred ccCCCCEEEEEC-CCC--CCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccc
Confidence 999999999998 544 4556778999999999999999999999988873 3 49999999999 89999999999
Q ss_pred CCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHH
Q 007257 467 KNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNY 543 (611)
Q Consensus 467 ~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (611)
+|+|++ +|++++|.+||+.+.++|+|.+++|++.++. +.++++++++++... .. ..
T Consensus 398 ~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----------------~~----~~ 456 (503)
T PRK04813 398 DFQIKL-NGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFE----------------RE----FE 456 (503)
T ss_pred cceEEE-CcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEecccccc----------------cc----ch
Confidence 999997 9999999999999999999999999985543 478888887763100 11 12
Q ss_pred HHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHH
Q 007257 544 ILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQ 596 (611)
Q Consensus 544 ~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~ 596 (611)
+.+.++++++ ..++.+++|+.+.++++. |+|++||++|++|+++++
T Consensus 457 ~~~~l~~~~~-~~l~~~~~P~~i~~~~~~------P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 457 LTKAIKKELK-ERLMEYMIPRKFIYRDSL------PLTPNGKIDRKALIEEVN 502 (503)
T ss_pred hHHHHHHHHH-hhCccccCCeEEEEeccC------CCCCCCCCcHHHHHHHhc
Confidence 3345555654 679999999999998765 999999999999999875
No 100
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.3e-60 Score=611.26 Aligned_cols=473 Identities=20% Similarity=0.250 Sum_probs=389.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +++||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 2012 ~a~~~p~~~A~~~~---~------~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vp 2082 (5163)
T PRK12316 2012 QAARAPEAIAVVFG---D------QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVP 2082 (5163)
T ss_pred HHHhCCCCeEEEcC---C------CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEee
Confidence 57889999999986 4 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++.+++++++++++++++.....+... ... ..+.++... .+.. . ..
T Consensus 2083 ld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~-~~~~~~~~~------------------~~~~-~-~~ 2136 (5163)
T PRK12316 2083 LDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP-----AGV-ARLPLDRDA------------------EWAD-Y-PD 2136 (5163)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc-----ccc-ceEeccchh------------------hhhc-c-Cc
Confidence 99999999999999999999999988655433110 011 111111100 0000 0 11
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||||+++|.++.+.+......+ ++..+++++.+.|++|..++..++.++..
T Consensus 2137 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~~~~~~~L~~ 2211 (5163)
T PRK12316 2137 TAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-----ELSPADCELQFMSFSFDGAHEQWFHPLLN 2211 (5163)
T ss_pred cCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-----CCCCcceEEEecCchHHHHHHHHHHHHhC
Confidence 1122345789999999999999999999999999999988877766 78899999999999999888888899999
Q ss_pred CceEEEecC---ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 007257 242 GASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASP 318 (611)
Q Consensus 242 G~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (611)
|+++++.+. ++..+++.++++++|+++++|+++..+.......
T Consensus 2212 G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---------------------------------- 2257 (5163)
T PRK12316 2212 GARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD---------------------------------- 2257 (5163)
T ss_pred CCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc----------------------------------
Confidence 999977653 7899999999999999999999999886532110
Q ss_pred HHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCc-c---ccCccCCCc
Q 007257 319 LADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEM-C---MVGTAGPVS 393 (611)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~-~---~~~~~G~~~ 393 (611)
...++||.+++||+++++++.+.|.+.+ +..++|.||+||++..++....... . ...++|+|+
T Consensus 2258 ------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~ 2325 (5163)
T PRK12316 2258 ------------GRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRAL 2325 (5163)
T ss_pred ------------cCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccCCCcCCccccc
Confidence 0113899999999999999999998766 6789999999999876654332211 1 125799999
Q ss_pred cCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc--------CCccccCceEEEccCCeEEEEec
Q 007257 394 VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--------DGWFHTGDIGQILPNGVVKIIDR 465 (611)
Q Consensus 394 ~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~dG~l~~~GR 465 (611)
++++++|+| +++ .+++.|+.|||+|+|++++.||+++|+.|.+.|. ++||+|||+|++++||.++++||
T Consensus 2326 ~~~~~~i~d-~~~--~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR 2402 (5163)
T PRK12316 2326 GNRRAYILD-ADL--NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGR 2402 (5163)
T ss_pred CCCEEEEEC-CCC--CCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecC
Confidence 999999998 554 4667889999999999999999999999999982 25999999999999999999999
Q ss_pred cCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC--CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHH
Q 007257 466 KKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK--SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNY 543 (611)
Q Consensus 466 ~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (611)
.||+||+ +|++|+|.|||++|.+||+|.+++|++.++. +.++|+|++.++.. .
T Consensus 2403 ~d~~iki-~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~~~~~l~a~v~~~~~~~------------------------~ 2457 (5163)
T PRK12316 2403 IDHQVKI-RGFRIELGEIEARLQAHPAVREAVVVAQDGASGKQLVAYVVPDDAAE------------------------D 2457 (5163)
T ss_pred CCCeEEE-cCccCChHHHHHHHhhCcccceEEEEEEecCCCeEEEEEEEecCCCc------------------------c
Confidence 9999998 8999999999999999999999999986543 48999999876420 0
Q ss_pred HHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHH
Q 007257 544 ILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYY 595 (611)
Q Consensus 544 ~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~ 595 (611)
..+.|+++++ ..||.|++|..+++++.. |+|++||++|++|.+..
T Consensus 2458 ~~~~l~~~l~-~~Lp~~~vP~~~~~l~~l------P~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2458 LLAELRAWLA-ARLPAYMVPAHWVVLERL------PLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred CHHHHHHHHH-hhCchhcCcceEeeeccc------CCCCCCccCHhhcCCCc
Confidence 1233444554 789999999999988665 99999999999997654
No 101
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.9e-59 Score=495.09 Aligned_cols=440 Identities=25% Similarity=0.303 Sum_probs=365.9
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. + +.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 12 ~a~~~~~~~a~~~~----~-----~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~ 82 (458)
T PRK09029 12 WAQVRPQAIALRLN----D-----EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLP 82 (458)
T ss_pred HHHhCCCceeeecC----C-----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEee
Confidence 46789999999865 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++..+.+++..+++++++++++++++... .. ..... .+. . ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--------~~~~~----------------------~~~-----~-~~ 125 (458)
T PRK09029 83 LNPQLPQPLLEELLPSLTLDFALVLEGENT-FS--------ALTSL----------------------HLQ-----L-VE 125 (458)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hh--------hcccc----------------------ccc-----c-cc
Confidence 999999999999999999999998765422 10 00000 000 0 00
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||+|.+||+++...+......+ +...+++++...|++|.+++...+.++..
T Consensus 126 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~g~~~~~~~l~~ 200 (458)
T PRK09029 126 GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-----PFTAQDSWLLSLPLFHVSGQGIVWRWLYA 200 (458)
T ss_pred ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-----CCCccceEEEecCcHhhhhhHHHHHHHhC
Confidence 1112234678899999999999999999999999999888766655 67889999999999999998777778999
Q ss_pred CceEEEecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 007257 242 GASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 321 (611)
Q Consensus 242 G~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (611)
|+++++.+. ..++..+ .++|.+..+|+++..+......
T Consensus 201 G~~v~~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~-------------------------------------- 238 (458)
T PRK09029 201 GATLVVRDK--QPLEQAL--AGCTHASLVPTQLWRLLDNRSE-------------------------------------- 238 (458)
T ss_pred CceEEeCCh--HHHHHHH--hhceeeecChHHHHHHHhcccc--------------------------------------
Confidence 999998764 5566666 4799999999999877642110
Q ss_pred HHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEe
Q 007257 322 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLE 401 (611)
Q Consensus 322 ~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~ 401 (611)
..+++.+++||+++++.+.+.+... |.++++.||+||++...+..... ...++|.|++++++++.
T Consensus 239 -----------~~~l~~i~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~---~~~~~G~~~~~~~~~i~ 303 (458)
T PRK09029 239 -----------PLSLKAVLLGGAAIPVELTEQAEQQ-GIRCWCGYGLTEMASTVCAKRAD---GLAGVGSPLPGREVKLV 303 (458)
T ss_pred -----------CCcceEEEECCCCCCHHHHHHHHHc-CCcEeccccccccCcceeccCCC---CCCCCCCCCCCCEEEEe
Confidence 1379999999999999999998864 99999999999998765543322 12568999999999988
Q ss_pred ecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcH
Q 007257 402 EVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALE 481 (611)
Q Consensus 402 ~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~ 481 (611)
+ |||+++|+.++.||+++++.+.....+|||+|||+|++| ||++++.||.+|+|++ +|.+|+|.
T Consensus 304 ~--------------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~-~G~~v~p~ 367 (458)
T PRK09029 304 D--------------GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFFS-GGEGIQPE 367 (458)
T ss_pred C--------------CEEEEecCceeeeeecCccccccccCCCccCCCCcEEEe-CCEEEEecccccceee-CCEEeCHH
Confidence 6 999999999999999999887765678999999999999 9999999999999997 99999999
Q ss_pred HHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCC
Q 007257 482 YLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLR 558 (611)
Q Consensus 482 ~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 558 (611)
+||+.|++||+|.||+|++.++. +.++++|++.... + .++|.++++ ++|+
T Consensus 368 eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~------------------~--------~~~l~~~~~-~~l~ 420 (458)
T PRK09029 368 EIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDSEA------------------A--------VVNLAEWLQ-DKLA 420 (458)
T ss_pred HHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCccc------------------C--------HHHHHHHHH-hhch
Confidence 99999999999999999998766 4788888866321 1 134455554 7899
Q ss_pred CcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHH
Q 007257 559 GFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 559 ~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~ 598 (611)
.|++|..+.+++.. |+|.+||++|+.|+++++..
T Consensus 421 ~~~~P~~~~~~~~~------p~t~~gKi~r~~L~~~~~~~ 454 (458)
T PRK09029 421 RFQQPVAYYLLPPE------LKNGGIKISRQALKEWVAQQ 454 (458)
T ss_pred hccCCeEEEEeccc------ccCcCCCcCHHHHHHHHHhc
Confidence 99999999998765 89999999999999888754
No 102
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-58 Score=503.81 Aligned_cols=504 Identities=21% Similarity=0.268 Sum_probs=384.8
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+|+++|+++|+++. + +++||.||.++++++|.+|.+ .|+++|++|+++++|++++++++|||+++|++++
T Consensus 32 ~a~~~p~~~a~~~~----~-----~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (560)
T PRK08974 32 AVARYADQPAFINM----G-----EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVV 102 (560)
T ss_pred HHHhCCCCceEEEC----C-----ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEe
Confidence 46789999999875 3 699999999999999999985 7999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcH--HHHHH---------h----hhCC
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA--EQKEM---------A----VQTG 145 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~---------~----~~~~ 145 (611)
|++|.++.+++.++++.+++++++++++....+...... .....++....... ..... . ....
T Consensus 103 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08974 103 NVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFK--TPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL 180 (560)
T ss_pred ccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhh--cCcceEEEecccccccccccccccchhhhcccccccccC
Confidence 999999999999999999999999987544332211110 11122221110000 00000 0 0000
Q ss_pred CceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecc
Q 007257 146 IKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLP 225 (611)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 225 (611)
....++.+................++++++++|||||||.||+|.++|.++...+......+.. ......+.++..+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~p 258 (560)
T PRK08974 181 PDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGP--LLHPGKELVVTALP 258 (560)
T ss_pred CCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhcc--ccCCCccEEEEeCc
Confidence 0111222222222111111223467899999999999999999999999998766543322210 01234567889999
Q ss_pred hhhHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 007257 226 LAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKY 302 (611)
Q Consensus 226 ~~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (611)
++|.+++.. .+.++..|+++++... ++..++..++++++|++.++|+++..+......
T Consensus 259 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------- 319 (560)
T PRK08974 259 LYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEF------------------- 319 (560)
T ss_pred HHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCc-------------------
Confidence 999998765 5556788888777643 788999999999999999999999887642100
Q ss_pred HHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC
Q 007257 303 KLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE 382 (611)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~ 382 (611)
. ...++++|.+++||+++++.+.+.|.+.+|.++++.||+||++..+..+..+.
T Consensus 320 ------------------~--------~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~ 373 (560)
T PRK08974 320 ------------------Q--------ELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL 373 (560)
T ss_pred ------------------c--------cCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC
Confidence 0 01124899999999999999999999988999999999999998877665544
Q ss_pred ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEE
Q 007257 383 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKI 462 (611)
Q Consensus 383 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~ 462 (611)
....+++|.|++++++++++ +++ .+++.|+.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++
T Consensus 374 ~~~~~~~G~~~~~~~~~i~~-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i 450 (560)
T PRK08974 374 DYYSGSIGLPVPSTEIKLVD-DDG--NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRI 450 (560)
T ss_pred cccCCccccCcCCCEEEEEC-CCC--CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEE
Confidence 44457899999999999998 544 456778899999999999999999999999888899999999999999999999
Q ss_pred EeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHH
Q 007257 463 IDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQ 539 (611)
Q Consensus 463 ~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (611)
.||.+|+|++ +|.+++|.+||+.|.++|+|.+++|++.++. +.++++++..+.. . .
T Consensus 451 ~GR~~d~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~---------~--------~--- 509 (560)
T PRK08974 451 VDRKKDMILV-SGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPS---------L--------T--- 509 (560)
T ss_pred EecccceEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCC---------C--------C---
Confidence 9999999997 8999999999999999999999999987654 2566666544311 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 540 LQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 540 ~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
.+++.+++. +.|+.++.|..+.++++. |+|++||++|++|+++..+..
T Consensus 510 -----~~~l~~~l~-~~l~~~~~P~~~~~~~~l------P~t~~GK~~r~~l~~~~~~~~ 557 (560)
T PRK08974 510 -----EEELITHCR-RHLTGYKVPKLVEFRDEL------PKSNVGKILRRELRDEARAKV 557 (560)
T ss_pred -----HHHHHHHHH-hhcccccCCcEEEEhhhC------CCCCCCcEeHHHHHHHHHhhh
Confidence 123334443 678999999999998665 999999999999999876654
No 103
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=5.7e-59 Score=499.47 Aligned_cols=458 Identities=18% Similarity=0.128 Sum_probs=333.0
Q ss_pred cCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcchhH------HHHhccccccccCccEEEEecC
Q 007257 59 GANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV------KELLSPDCRSAQRLRVMVCFTS 132 (611)
Q Consensus 59 ~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~i~~~~~ 132 (611)
++|++++++++|||+++|++++|+++.++.+++.++|+.++++++|+++... ..+.... .. .....++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~-~~~~~i~~~~~ 78 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVV-EA-APAKAIVLPAA 78 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhh-hc-ccceEEEEecc
Confidence 5899999999999999999999999999999999999999999999986421 1111100 00 11122222211
Q ss_pred CcHHHHHHhhhCCCceeeHHHHHhcccc------cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccc
Q 007257 133 LTAEQKEMAVQTGIKPYSWDEFLHLGKV------NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLF 206 (611)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~ 206 (611)
.... .........+|.++...... .........++++++|+|||||||.||||++||.++..........
T Consensus 79 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~ 154 (499)
T PLN03051 79 GEPV----AVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAH 154 (499)
T ss_pred Cccc----CCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHh
Confidence 1000 00000112345555422110 0111112356899999999999999999999999987665444333
Q ss_pred cccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHH
Q 007257 207 LDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKA 284 (611)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~ 284 (611)
+ ++..+|++++..|++|.+++...+.++..|+++++.+. ++..+++.|+++++|++.++|+++..|.+.....
T Consensus 155 ~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~ 229 (499)
T PLN03051 155 M-----DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFA 229 (499)
T ss_pred c-----CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccc
Confidence 3 67788999999999999887767778999999998864 7889999999999999999999998875421000
Q ss_pred HHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc--CCce
Q 007257 285 LEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFL 362 (611)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v 362 (611)
... ..+++||.+++||++++++..+++.+.+ ++++
T Consensus 230 -----------------------------------~~~--------~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~ 266 (499)
T PLN03051 230 -----------------------------------MEG--------LDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPV 266 (499)
T ss_pred -----------------------------------ccc--------CCchhheEEEecCCCCCHHHHHHHHHhcccccee
Confidence 000 1124899999999999999988887733 4789
Q ss_pred eeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCc--ccccCCChHhhhhh
Q 007257 363 VQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTL--FSGYYKNPDLTRES 440 (611)
Q Consensus 363 ~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~--~~gy~~~~~~~~~~ 440 (611)
++.||+||++..+...........+++|.|.++++++|+| +++...+.+.++.|||+++||.+ +.||++++. + +.
T Consensus 267 ~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~-~~ 343 (499)
T PLN03051 267 IEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-D-KV 343 (499)
T ss_pred EeeeccccccceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcCCCCccccCCcc-c-ce
Confidence 9999999987644332222223347899999999999998 66654444333689999999976 579997653 3 33
Q ss_pred ccCC----------ccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhc-CcCcceEEEEecCCC----C
Q 007257 441 IIDG----------WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCV-APIIEDIWVYGDSLK----S 505 (611)
Q Consensus 441 ~~~g----------~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~-~p~V~~~~v~~~~~~----~ 505 (611)
|.+| ||+|||+|++|+||+|++.||.||+|++ +|++|+|.|||++|.+ ||+|.||+|++.++. +
T Consensus 344 ~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~-~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~ 422 (499)
T PLN03051 344 YYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNL-GGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPE 422 (499)
T ss_pred eeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEee-CCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCce
Confidence 4344 6899999999999999999999999996 9999999999999986 999999999998764 3
Q ss_pred eEEEEE---ecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCcccc
Q 007257 506 MLVAVV---VPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTA 582 (611)
Q Consensus 506 ~~~a~v---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~ 582 (611)
.++|+| +++++.. .. +..+ +.+.+++.++ ++|+.+..|..|.++++. |+|+
T Consensus 423 ~~~a~v~~~v~~~~~~-------~~--------~~~~----l~~~~~~~l~-~~l~~~~~~~~i~~v~~l------P~t~ 476 (499)
T PLN03051 423 LLVIFLVLGEEKKGFD-------QA--------RPEA----LQKKFQEAIQ-TNLNPLFKVSRVKIVPEL------PRNA 476 (499)
T ss_pred EEEEEEEcceeccccc-------cc--------chHH----HHHHHHHHHH-hhcCCccCCceEEEcCCC------CCCC
Confidence 688888 6654310 00 1223 3334444443 568876667778888665 9999
Q ss_pred ccccchHHHHHHHHHHHH
Q 007257 583 TLKKKRNKLLIYYQVEID 600 (611)
Q Consensus 583 ~GKv~R~~l~~~~~~~~~ 600 (611)
+||++|++|++.+.+.+.
T Consensus 477 ~GKi~r~~L~~~~~~~~~ 494 (499)
T PLN03051 477 SNKLLRRVLRDQLKKELS 494 (499)
T ss_pred CccHHHHHHHHHHHHhhc
Confidence 999999999988877654
No 104
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.8e-58 Score=543.47 Aligned_cols=486 Identities=18% Similarity=0.172 Sum_probs=376.8
Q ss_pred ccccCC-CCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYP-GNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~p-d~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+++++| +++++.+. ++ +++||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+++|++++
T Consensus 640 ~~~~~~~~~~ai~~~---~~-----~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v 710 (1140)
T PRK06814 640 AAKIHGFKKLAVEDP---VN-----GPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRVPA 710 (1140)
T ss_pred HHHHcCCCCeEeECC---CC-----CccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEE
Confidence 345665 56776653 23 689999999999999999975 999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHh-ccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccc
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL-SPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGK 159 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (611)
|+++.++.+++.+++++++++++++++....... .......+....++.+++.... ......+.+.....
T Consensus 711 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~- 781 (1140)
T PRK06814 711 MINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQ--------IGLADKIKGLLAGR- 781 (1140)
T ss_pred EcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhcc--------CChHHHHHHHhhcc-
Confidence 9999999999999999999999999876543221 0000111222334444322100 00000111111111
Q ss_pred ccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHH
Q 007257 160 VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYF 238 (611)
Q Consensus 160 ~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~ 238 (611)
..........++++++++|||||||.||+|.++|+++...+......+ ++..+|++++.+|++|.+++.. .+.+
T Consensus 782 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~g~~~~~~~~ 856 (1140)
T PRK06814 782 FPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-----DFSPEDKVFNALPVFHSFGLTGGLVLP 856 (1140)
T ss_pred CCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-----CCCCcCEEEEecchHHHHHHHHHHHHH
Confidence 011111135789999999999999999999999999988887766655 7788999999999999999854 6668
Q ss_pred hhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 239 FRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 239 l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
+..|+++++.+. +...+.+.++++++|+++++|++++.+.+...
T Consensus 857 l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~---------------------------------- 902 (1140)
T PRK06814 857 LLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH---------------------------------- 902 (1140)
T ss_pred HHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc----------------------------------
Confidence 999999998864 66778899999999999999999887754210
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCe
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYS 396 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~ 396 (611)
...++++|.+++||+++++++.+.+.+.+|+++++.||+||++.......+.. ...+++|+|.|++
T Consensus 903 -------------~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~g~ 968 (1140)
T PRK06814 903 -------------PYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMH-NKAGTVGRLLPGI 968 (1140)
T ss_pred -------------cccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCC-CCCCcCCccCCCC
Confidence 01124899999999999999999999989999999999999998776554332 3347899999999
Q ss_pred eEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhh-hhccCCccccCceEEEccCCeEEEEeccCCeEEcCCc
Q 007257 397 ELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTR-ESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQG 475 (611)
Q Consensus 397 ~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G 475 (611)
++++.+. ++ .++.|||+++|++++.||+++++... +...+|||+|||+|++|+||++++.||.||+|++ +|
T Consensus 969 ~~~~~~~-~~------~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~-~G 1040 (1140)
T PRK06814 969 EYRLEPV-PG------IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKI-AG 1040 (1140)
T ss_pred eEEEeec-CC------CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeee-CC
Confidence 9999873 21 24679999999999999998765332 2235899999999999999999999999999997 99
Q ss_pred eecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHH
Q 007257 476 EYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAA 552 (611)
Q Consensus 476 ~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 552 (611)
++|+|.+||++|.+||.|.+++|++.++. +.+++++...+ . + .+++.+++
T Consensus 1041 ~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~~~~-~------------------~--------~~~l~~~~ 1093 (1140)
T PRK06814 1041 EMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTTASD-A------------------T--------RAAFLAHA 1093 (1140)
T ss_pred EEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEcCCC-c------------------C--------HHHHHHHH
Confidence 99999999999999999999999997765 35555543211 1 1 12344455
Q ss_pred HhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHHHH
Q 007257 553 ERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQVEI 599 (611)
Q Consensus 553 ~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~~~ 599 (611)
++..++.|++|..++++++. |+|++||++|++|++++++.+
T Consensus 1094 ~~~~l~~~~~P~~i~~v~~l------P~t~~GKi~r~~L~~~~~~~~ 1134 (1140)
T PRK06814 1094 KAAGASELMVPAEIITIDEI------PLLGTGKIDYVAVTKLAEEAA 1134 (1140)
T ss_pred HHcCCCcccCCcEEEEecCc------CCCCCCCCcHHHHHHHHHHhh
Confidence 44569999999999998765 999999999999999877654
No 105
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-58 Score=498.54 Aligned_cols=496 Identities=24% Similarity=0.288 Sum_probs=371.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.++++||++|+++. + ..+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 27 ~~~~~~~~~a~~~~---~------~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vp 97 (545)
T PRK08162 27 AAEVYPDRPAVIHG---D------RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNT 97 (545)
T ss_pred HHHHCCCCeEEEEC---C------eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEec
Confidence 46789999999875 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++..+++.+++++++++.+....+..... ..+..+ .+.++..... ..........++.++.......
T Consensus 98 l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 172 (545)
T PRK08162 98 LNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALA-LLPGPK-PLVIDVDDPE---YPGGRFIGALDYEAFLASGDPD 172 (545)
T ss_pred cccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHh-hCCCCc-eEEEecCccc---cccCCCcccccHHHHhccCCcc
Confidence 9999999999999999999999999876655433221 111111 1222211100 0000111233455555432111
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
.....+...+++++++|||||||.||+|+++|.++...+......+ .+..++++++.+|++|.+++...+...+.
T Consensus 173 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~~~~~~~~~~~~ 247 (545)
T PRK08162 173 FAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-----GMPKHPVYLWTLPMFHCNGWCFPWTVAAR 247 (545)
T ss_pred ccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeeEeccCcHhhhhHHHHHHHHHH
Confidence 1111123456789999999999999999999998766655443333 56778899999999999988765554444
Q ss_pred CceEEEec-CChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 242 GASVGYYH-GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 242 G~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
|++.++.. .++..+++.++++++|++.++|+++..|++......
T Consensus 248 ~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~----------------------------------- 292 (545)
T PRK08162 248 AGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWR----------------------------------- 292 (545)
T ss_pred ccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccc-----------------------------------
Confidence 55544444 499999999999999999999999998865211100
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCC----------ccccCccC
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE----------MCMVGTAG 390 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~----------~~~~~~~G 390 (611)
..+.+.+.++++|+.++++..+.+.+. +.++++.||+||+++.+..+.... .....+.|
T Consensus 293 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 361 (545)
T PRK08162 293 ----------AGIDHPVHAMVAGAAPPAAVIAKMEEI-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQG 361 (545)
T ss_pred ----------cCCccceEEEECCCCCCHHHHHHHHHh-CCceeecccccccCcceeecccccccccCCccchhhccCCCC
Confidence 000245667889999999999998874 899999999999976655543211 01123456
Q ss_pred CCcc-CeeEEEeecCCCCCCCCCC-C-CCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccC
Q 007257 391 PVSV-YSELRLEEVPEMGYSPLDD-P-PCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKK 467 (611)
Q Consensus 391 ~~~~-~~~v~i~~~~~~~~~~~~~-~-~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~ 467 (611)
.+.+ +..++++| +++. .+++. | +.|||+++|+.++.||+++++.+...|.+|||+|||+|++|+||.+++.||.+
T Consensus 362 ~~~~~~~~~~i~d-~~~~-~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~ 439 (545)
T PRK08162 362 VRYPLQEGVTVLD-PDTM-QPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSK 439 (545)
T ss_pred cccCCcceEEEEc-CCCC-cccCCCCCceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcCCccEEEEeccc
Confidence 5544 33567776 3332 33332 3 46999999999999999999999999999999999999999999999999999
Q ss_pred CeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHH
Q 007257 468 NLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYI 544 (611)
Q Consensus 468 d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
|++++ +|.+|+|.+||+.|.++|+|.+++|++.++. +.+.+++++.++.. . +
T Consensus 440 ~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~--------~--------~-------- 494 (545)
T PRK08162 440 DIIIS-GGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGAS--------A--------T-------- 494 (545)
T ss_pred ceEEe-CCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCC--------C--------C--------
Confidence 99996 9999999999999999999999999987644 47888888775320 0 1
Q ss_pred HHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 545 LSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 545 ~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.+++.++++ +.|+.+++|+.+++. + +|+|++||++|+.|+++++.
T Consensus 495 ~~~l~~~~~-~~l~~~~~P~~~~~~-~------iP~t~~gK~~r~~l~~~~~~ 539 (545)
T PRK08162 495 EEEIIAHCR-EHLAGFKVPKAVVFG-E------LPKTSTGKIQKFVLREQAKS 539 (545)
T ss_pred HHHHHHHHH-HhcccccCCcEEEec-c------cCCCCCcCCcHHHHHHHHhh
Confidence 123444443 678999999988753 3 38999999999999988755
No 106
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.4e-58 Score=492.38 Aligned_cols=480 Identities=21% Similarity=0.234 Sum_probs=379.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEE
Q 007257 26 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFV 105 (611)
Q Consensus 26 ~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~ 105 (611)
+.+||.||.+.+.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.++++++++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhcccccccc-CccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCC
Q 007257 106 QDKKVKELLSPDCRSAQ-RLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSG 184 (611)
Q Consensus 106 ~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG 184 (611)
++........... ..+ ....++...... .....|++...... .......++.++++|||||||
T Consensus 90 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG 153 (502)
T PRK08276 90 SAALADTAAELAA-ELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQP----DTPIADETAGADMLYSSGTTG 153 (502)
T ss_pred ccchhhHHHHHhh-hccccccEEEEeCCCC-----------CccccHHHHHhcCC----CCCCCCCCcceEEEECCCCCC
Confidence 8876554432211 112 334444432211 11233444432211 111234567899999999999
Q ss_pred CCceeeeccHhHHHhhh--hcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC-ChHHHHHHHhh
Q 007257 185 DPKGVVLTHETIATFVS--GVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-DLNALRDDLME 261 (611)
Q Consensus 185 ~pK~v~~s~~~l~~~~~--~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~ 261 (611)
.||+|.++|.++..... ...... ........++++++..|++|..++...+.++..|+++++.+. ++..+++.+++
T Consensus 154 ~PK~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 232 (502)
T PRK08276 154 RPKGIKRPLPGLDPDEAPGMMLALL-GFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIER 232 (502)
T ss_pred CCceEEEccCCcchhhhhHHhhhhh-hhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHH
Confidence 99999999887654332 110100 001123467899999999999998887788999999988876 89999999999
Q ss_pred hcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEE
Q 007257 262 LKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVIS 341 (611)
Q Consensus 262 ~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 341 (611)
+++|++.++|+++..+....... ...++ ++++|.+++
T Consensus 233 ~~~t~~~~~P~~~~~l~~~~~~~-----------------------------------~~~~~--------~~~lr~i~~ 269 (502)
T PRK08276 233 YRVTHSQLVPTMFVRMLKLPEEV-----------------------------------RARYD--------VSSLRVAIH 269 (502)
T ss_pred hCCeEEEehHHHHHHHHhCcccc-----------------------------------CCCCC--------cccceEEEe
Confidence 99999999999998876421100 00011 248999999
Q ss_pred ecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEE
Q 007257 342 GGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCV 421 (611)
Q Consensus 342 ~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v 421 (611)
||+++++++.+++.+.+|.++++.||+||+++++...........+++|.|+ +.++++.+ +++ .+++.|+.|||++
T Consensus 270 ~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~--~~~~~g~~Gel~v 345 (502)
T PRK08276 270 AAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDG--NELPPGEIGTVYF 345 (502)
T ss_pred cCCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCC--CCCcCCCceEEEE
Confidence 9999999999999998899999999999999876665544334457899999 78999987 554 4566778999999
Q ss_pred ecCCcccccCCChHhhhhhcc-CCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEe
Q 007257 422 RGKTLFSGYYKNPDLTRESII-DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYG 500 (611)
Q Consensus 422 ~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~ 500 (611)
+|+.++.||+++++.+...+. +|||+|||+++++++|.+++.||.||++++ +|.+|++.+||..|.++|+|.+|+|++
T Consensus 346 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~iE~~i~~~~~v~~~~v~~ 424 (502)
T PRK08276 346 EMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIIS-GGVNIYPQEIENLLVTHPKVADVAVFG 424 (502)
T ss_pred ECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEe
Confidence 999999999999999999984 599999999999999999999999999996 999999999999999999999999999
Q ss_pred cCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCC
Q 007257 501 DSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMER 577 (611)
Q Consensus 501 ~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~ 577 (611)
..+. +.+++++++++... ...++. +.+.+.++ .+|+.++.|..++++++.
T Consensus 425 ~~~~~~~~~~~~~v~~~~~~~-----------------~~~~~~----~~i~~~~~-~~l~~~~~p~~i~~~~~l----- 477 (502)
T PRK08276 425 VPDEEMGERVKAVVQPADGAD-----------------AGDALA----AELIAWLR-GRLAHYKCPRSIDFEDEL----- 477 (502)
T ss_pred CCCcccCceEEEEEEECCCCC-----------------CChhhH----HHHHHHHH-hhccCCCCCcEEEEecCC-----
Confidence 7755 37999999876420 111222 33444443 679999999999998665
Q ss_pred CccccccccchHHHHHHHHHH
Q 007257 578 DLVTATLKKKRNKLLIYYQVE 598 (611)
Q Consensus 578 ~P~t~~GKv~R~~l~~~~~~~ 598 (611)
|+|++||++|++|++.|-..
T Consensus 478 -P~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 478 -PRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred -CCCcccchhHHHHHHHHHhh
Confidence 99999999999999997554
No 107
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.4e-59 Score=597.32 Aligned_cols=478 Identities=18% Similarity=0.163 Sum_probs=390.1
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + ..+||+||+++++++|++|.+.|+++|++|++++++++++++++||++++|++++|
T Consensus 3729 ~~~~~p~~~Av~~~---~------~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vp 3799 (4334)
T PRK05691 3729 QVAAHPQRIAASCL---D------QQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLP 3799 (4334)
T ss_pred HHHhCCCceEEEcC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeC
Confidence 57899999999987 4 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccc-cCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA-QRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
++|.++.+++.++++++++++++++............... .....++..++. ......
T Consensus 3800 ld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 3858 (4334)
T PRK05691 3800 LDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEV---------------------QAGEVA 3858 (4334)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeeccc---------------------cccccc
Confidence 9999999999999999999999998865432211110000 001111111111 000001
Q ss_pred cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhh
Q 007257 161 NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFR 240 (611)
Q Consensus 161 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~ 240 (611)
.........+++++|++|||||||.||||+++|+++.+.+......+ +++..++++...++++..+....+.++.
T Consensus 3859 ~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~fd~s~~~~~~~l~ 3933 (4334)
T PRK05691 3859 SHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-----ALSEADVIAQTASQSFDISVWQFLAAPL 3933 (4334)
T ss_pred ccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-----CCCccceEEEecCCchhHHHHHHHHHHh
Confidence 11122345789999999999999999999999999999988877766 7899999999999999999988999999
Q ss_pred cCceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 241 RGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 241 ~G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
.|+++++++. ++..+++.++++++|++.++|+++..++.....
T Consensus 3934 ~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~--------------------------------- 3980 (4334)
T PRK05691 3934 FGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ--------------------------------- 3980 (4334)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc---------------------------------
Confidence 9999999865 788999999999999999999999887542110
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCC---ccccCccCCC
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE---MCMVGTAGPV 392 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~---~~~~~~~G~~ 392 (611)
.+++||.+++||+++++++.+.|.+.+ ++.++|.||+||++..++...... .....++|+|
T Consensus 3981 ---------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p 4045 (4334)
T PRK05691 3981 ---------------ALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSP 4045 (4334)
T ss_pred ---------------cCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCc
Confidence 114899999999999999999987765 789999999999998776543222 1122469999
Q ss_pred ccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc--------CCccccCceEEEccCCeEEEEe
Q 007257 393 SVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--------DGWFHTGDIGQILPNGVVKIID 464 (611)
Q Consensus 393 ~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~dG~l~~~G 464 (611)
++++.+.++| ++. .+++.|..|||+|+|++++.||+++|+.|+++|. ++||+|||+|++++||.++++|
T Consensus 4046 ~~~~~~~v~d-~~~--~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~G 4122 (4334)
T PRK05691 4046 TDNNRLYLLD-EAL--ELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVG 4122 (4334)
T ss_pred cCCCEEEEEC-CCC--CCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEec
Confidence 9999999997 444 4566778999999999999999999999999982 4699999999999999999999
Q ss_pred ccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecC--CCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHH
Q 007257 465 RKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDS--LKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQN 542 (611)
Q Consensus 465 R~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~--~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (611)
|.|++||+ +|++|++.|||+.|+++|+|.+|+|+... ..+.++|++++..... ...+
T Consensus 4123 R~d~qvki-~G~riel~eIE~~l~~~~~v~~a~v~~~~~~~~~~l~a~~~~~~~~~-----------------~~~~--- 4181 (4334)
T PRK05691 4123 RIDHQVKI-RGYRIELGEIEARLHEQAEVREAAVAVQEGVNGKHLVGYLVPHQTVL-----------------AQGA--- 4181 (4334)
T ss_pred ccCCcEEe-ceEEecHHHHHHHHHhCCCccEEEEEEecCCCCcEEEEEEeCCcccc-----------------cchH---
Confidence 99999998 99999999999999999999999987533 2358999998765421 1111
Q ss_pred HHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 543 YILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 543 ~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
..+.|++.++ +.||.|++|..++.+++. |+|++||++|++|.+.
T Consensus 4182 -~~~~l~~~l~-~~Lp~ymvP~~~~~~~~l------P~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4182 -LLERIKQRLR-AELPDYMVPLHWLWLDRL------PLNANGKLDRKALPAL 4225 (4334)
T ss_pred -HHHHHHHHHH-hhCChhhcCcceeecccC------CCCCCCcccHhhcCCC
Confidence 2334555554 789999999999988665 9999999999999764
No 108
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-57 Score=491.93 Aligned_cols=481 Identities=21% Similarity=0.224 Sum_probs=377.0
Q ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEE
Q 007257 26 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFV 105 (611)
Q Consensus 26 ~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~ 105 (611)
+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.++.+++.++++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhccccccccCccEEEEecCCcHHHHH--H---hhhCCCceeeHHHHHhcccccCCcCCCCCCCCeEEEEEec
Q 007257 106 QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKE--M---AVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTS 180 (611)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 180 (611)
+......+.+... ....++........... . ..........|+++..... ......++++++++|||
T Consensus 90 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TS 161 (509)
T PRK12406 90 HADLLHGLASALP----AGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE----PYDGPPVPQPQSMIYTS 161 (509)
T ss_pred ccchhhhhhhhhh----cccceeecccccccccccccccccccCCCCccCHHHHhcccC----ccCCCCCCCceEEEECC
Confidence 8876654432221 11111111111000000 0 0001112334555442211 12233578999999999
Q ss_pred CCCCCCceeeeccHhHHHh---hhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC-ChHHHH
Q 007257 181 GTSGDPKGVVLTHETIATF---VSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-DLNALR 256 (611)
Q Consensus 181 GTTG~pK~v~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~ 256 (611)
||||.||+|.++|.+.... .......+ ++..++++++..|++|..+....+.++..|+++++.+. ++..++
T Consensus 162 GtTG~PK~v~~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (509)
T PRK12406 162 GTTGHPKGVRRAAPTPEQAAAAEQMRALIY-----GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELL 236 (509)
T ss_pred CCCCCCceEEEechhHHHHHHHHHhhhhhc-----CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHH
Confidence 9999999999877654332 22222333 67888999999999998887777777888999988776 899999
Q ss_pred HHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCce
Q 007257 257 DDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRL 336 (611)
Q Consensus 257 ~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 336 (611)
+.++++++|++.++|+++..++....... +...++++
T Consensus 237 ~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-------------------------------------------~~~~~~~l 273 (509)
T PRK12406 237 QLIERHRITHMHMVPTMFIRLLKLPEEVR-------------------------------------------AKYDVSSL 273 (509)
T ss_pred HHHHHcCCeEEEccHHHHHHHHhCchhhc-------------------------------------------ccCCCCce
Confidence 99999999999999999988764211100 00112489
Q ss_pred eEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCC
Q 007257 337 RLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPC 416 (611)
Q Consensus 337 ~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~ 416 (611)
+.+++||+++++++.+++.+.++..+++.||+||++.+++.+.......++++|.+.+++++++++ +++ .+++.++.
T Consensus 274 ~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~--~~~~~g~~ 350 (509)
T PRK12406 274 RHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDG--RPLPQGEI 350 (509)
T ss_pred eEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCC--CCCCCCCc
Confidence 999999999999999999998899999999999999877665444444557899999999999998 554 45667889
Q ss_pred cEEEEecCCccc-ccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcce
Q 007257 417 GEVCVRGKTLFS-GYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIED 495 (611)
Q Consensus 417 Gel~v~~~~~~~-gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~ 495 (611)
|||+++|++++. +|+++++.+...+.+|||+|||++++++||.+++.||.+|+|++ +|.+|+|.+||+.|+++|+|.+
T Consensus 351 Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~-~G~~v~~~~IE~~l~~~~~v~~ 429 (509)
T PRK12406 351 GEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDADGYLFLCDRKRDMVIS-GGVNIYPAEIEAVLHAVPGVHD 429 (509)
T ss_pred eEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcCCceEEEeecccceEEE-CCEEECHHHHHHHHHhCCCeeE
Confidence 999999998875 89999998888788999999999999999999999999999996 9999999999999999999999
Q ss_pred EEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCC
Q 007257 496 IWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRP 572 (611)
Q Consensus 496 ~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~ 572 (611)
+++++.++. +.+++++++.+... . . .+++.+.++ ..++.|++|..+.++++.
T Consensus 430 ~~v~~~~~~~~~~~~~~~v~~~~~~~--------~--------~--------~~~l~~~l~-~~l~~~~~P~~i~~~~~i 484 (509)
T PRK12406 430 CAVFGIPDAEFGEALMAVVEPQPGAT--------L--------D--------EADIRAQLK-ARLAGYKVPKHIEIMAEL 484 (509)
T ss_pred EEEEeeeccccCceeEEEEEECCCCC--------C--------C--------HHHHHHHHH-HhcccCCCCcEEEEeccC
Confidence 999987654 36888888765310 0 1 123344443 679999999999988665
Q ss_pred CCCCCCccccccccchHHHHHHHHH
Q 007257 573 FDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 573 ~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
|+|++||++|++|++.|.+
T Consensus 485 ------P~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 485 ------PREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred ------CCCCccchhHHHHHHHHHh
Confidence 9999999999999887644
No 109
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-57 Score=493.49 Aligned_cols=495 Identities=20% Similarity=0.211 Sum_probs=383.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.|+++||++|+++. + +.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++++
T Consensus 12 ~a~~~p~~~a~~~~----~-----~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~ 82 (533)
T PRK07798 12 VADAVPDRVALVCG----D-----RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVN 82 (533)
T ss_pred HHHhCCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEe
Confidence 57899999999885 3 69999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
+++.++.+++.++++++++++++++......+.+.. ...+..+.++.+++..... ......+++++.......
T Consensus 83 l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 155 (533)
T PRK07798 83 VNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVL-PRLPKLRTLVVVEDGSGND------LLPGAVDYEDALAAGSPE 155 (533)
T ss_pred cCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHh-ccCCCccEEEEecCCcccc------cCCccccHHHHHhccCCc
Confidence 999999999999999999999999987665554332 2234555566665432110 011234566665443211
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhccccccc----ccCCC------CCCcEEEEecchhhHHH
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQ----FEDKM------TVDDVYLSFLPLAHILD 231 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~----~~~~~------~~~~~~l~~~p~~~~~g 231 (611)
..... ..++.++++|||||||.||+|+++|.++..........+.. ....+ ..+++++...|++|..+
T Consensus 156 -~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~ 233 (533)
T PRK07798 156 -RDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAG 233 (533)
T ss_pred -CCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhh
Confidence 11112 23455799999999999999999999987655432221100 00011 56789999999999999
Q ss_pred HHHHHHHhhcCceEEEec--C-ChHHHHHHHhhhcCeEEecchHHHHH-HHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 007257 232 RVIEEYFFRRGASVGYYH--G-DLNALRDDLMELKPTLLAGVPRVFEK-IHEGIKKALEELRPLRRRIFDALYKYKLAWM 307 (611)
Q Consensus 232 ~~~~~~~l~~G~~~~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
+...+.++..|+++++.+ . ++..+++.++++++|++.++|..+.. +...+. .
T Consensus 234 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~----------------------- 289 (533)
T PRK07798 234 QWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-A----------------------- 289 (533)
T ss_pred HHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-c-----------------------
Confidence 988888999999999998 4 89999999999999999999876643 322111 0
Q ss_pred hhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCcccc
Q 007257 308 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMV 386 (611)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~~~~ 386 (611)
.....+++++.+++||+++++++.+++.+.+ +.++++.||+||++...........
T Consensus 290 --------------------~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~--- 346 (533)
T PRK07798 290 --------------------RGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKGA--- 346 (533)
T ss_pred --------------------cccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCCC---
Confidence 0011225899999999999999999999988 7899999999999766554432221
Q ss_pred CccC--CCccCeeEEEeecCCCCCCCCCCCCC--cEEEEecCCcccccCCChHhhhhhcc----CCccccCceEEEccCC
Q 007257 387 GTAG--PVSVYSELRLEEVPEMGYSPLDDPPC--GEVCVRGKTLFSGYYKNPDLTRESII----DGWFHTGDIGQILPNG 458 (611)
Q Consensus 387 ~~~G--~~~~~~~v~i~~~~~~~~~~~~~~~~--Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGD~~~~~~dG 458 (611)
...| .+.++..+++.+ +++. +++.++. |+|+ +++.++.||+++++.+.+.|. ++||+|||++++|++|
T Consensus 347 ~~~g~~~~~~~~~~~i~~-~~~~--~~~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g 422 (533)
T PRK07798 347 VHTGGPRFTIGPRTVVLD-EDGN--PVEPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADG 422 (533)
T ss_pred ccCCCCccCCCceEEEEC-CCCC--CCCCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCC
Confidence 2233 778899999998 6655 4444545 6665 566889999999999998883 2599999999999999
Q ss_pred eEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHh
Q 007257 459 VVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELC 535 (611)
Q Consensus 459 ~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~ 535 (611)
++++.||.+|+++. +|.+|+|.+||++|.++|+|.+++|++.++. +.+.++++++++.. .
T Consensus 423 ~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~-------- 485 (533)
T PRK07798 423 TITLLGRGSVCINT-GGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGAR--------P-------- 485 (533)
T ss_pred cEEEEccccceEec-CCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCC--------C--------
Confidence 99999999999996 9999999999999999999999999997654 46888888765320 0
Q ss_pred ccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 536 SLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 536 ~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
+ .++|.+.++ +.|+.|++|..++++++. |+|++||++|++|+++.++
T Consensus 486 ~--------~~~l~~~l~-~~l~~~~~P~~i~~~~~i------P~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 486 D--------LAELRAHCR-SSLAGYKVPRAIWFVDEV------QRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred C--------HHHHHHHHh-hhcccCCCCeEEEEcccC------CCCCcchhhHHHHhhhhcc
Confidence 1 123444443 679999999999988765 9999999999999998765
No 110
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2.4e-57 Score=480.19 Aligned_cols=433 Identities=25% Similarity=0.308 Sum_probs=355.2
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 29 TYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 29 Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred hHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCce
Q 007257 109 KVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKG 188 (611)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~ 188 (611)
..... + . ...+..+................+++++++|||||||.||+
T Consensus 81 ~~~~~-------------~-~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 81 LEEKD-------------F-Q------------------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred ccccc-------------e-e------------------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 32110 0 0 00111111111111111223457889999999999999999
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecCChHHHHHHHhhhcCeEEe
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLA 268 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~l~ 268 (611)
|.++|.++...+......+ ++..+|++++..|++|.+++...+.++..|+++++.+.. ..+++.++++++|++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL-----GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc-----CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEE
Confidence 9999999998888776666 788899999999999999988778889999999998653 4899999999999999
Q ss_pred cchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCH
Q 007257 269 GVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLST 348 (611)
Q Consensus 269 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~ 348 (611)
++|+++..+.+.... .++++.++++|+++++
T Consensus 203 ~~P~~l~~l~~~~~~-------------------------------------------------~~~l~~~~~~G~~~~~ 233 (436)
T TIGR01923 203 LVPTQLNRLLDEGGH-------------------------------------------------NENLRKILLGGSAIPA 233 (436)
T ss_pred eHHHHHHHHHhCcCC-------------------------------------------------CCceEEEEECCCCCCH
Confidence 999999887652110 0389999999999999
Q ss_pred HHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCccc
Q 007257 349 EVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFS 428 (611)
Q Consensus 349 ~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~ 428 (611)
++.+++.. +|+++++.||+||+++..+...........++|.+++++++++.. ++. ++.|||+++|+.++.
T Consensus 234 ~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~-------~~~Gel~v~~~~~~~ 304 (436)
T TIGR01923 234 PLIEEAQQ-YGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKV-DNK-------EGHGEIMVKGANLMK 304 (436)
T ss_pred HHHHHHHH-hCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEe-CCC-------CCceEEEEECCccch
Confidence 99998876 499999999999998866654443322223589999999999854 222 157999999999999
Q ss_pred ccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC---C
Q 007257 429 GYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK---S 505 (611)
Q Consensus 429 gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~ 505 (611)
||+++++.+...+.+|||+|||++++++||.+++.||.+|++++ +|.+|++.+||++|.++|.|.+++|++.++. .
T Consensus 305 gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 383 (436)
T TIGR01923 305 GYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRDDLIIS-GGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQ 383 (436)
T ss_pred hhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEeccccCeEEe-CCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCC
Confidence 99998888887778899999999999999999999999999997 9999999999999999999999999997754 3
Q ss_pred eEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccc
Q 007257 506 MLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLK 585 (611)
Q Consensus 506 ~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GK 585 (611)
.+.++++++++. +. +.+.++++ +.|+.+++|..++++++. |+|++||
T Consensus 384 ~~~~~v~~~~~~------------------~~--------~~l~~~l~-~~l~~~~~p~~i~~~~~i------P~t~~GK 430 (436)
T TIGR01923 384 VPVAYIVSESDI------------------SQ--------AKLIAYLT-EKLAKYKVPIAFEKLDEL------PYNASGK 430 (436)
T ss_pred eeEEEEEECCCC------------------CH--------HHHHHHHH-HhhhCCCCCeEEEEecCC------CCCCCCc
Confidence 677888776532 11 23333443 678999999999998665 9999999
Q ss_pred cchHHH
Q 007257 586 KKRNKL 591 (611)
Q Consensus 586 v~R~~l 591 (611)
++|++|
T Consensus 431 ~~r~~L 436 (436)
T TIGR01923 431 ILRNQL 436 (436)
T ss_pred eecccC
Confidence 999864
No 111
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.6e-58 Score=587.97 Aligned_cols=469 Identities=21% Similarity=0.234 Sum_probs=386.9
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||+||.++++++|++|.+.|+++|++|++++++++++++++||++++|++++|
T Consensus 1140 ~a~~~p~~~Al~~~---~------~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~vp 1210 (4334)
T PRK05691 1140 QARQTPERIALVWD---G------GSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAYVP 1210 (4334)
T ss_pred HHHhCCCCeEEEEC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 57889999999986 4 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++.++++++++++++++......+... ... ..+.++.... ..+ ..
T Consensus 1211 ld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~-----~~~-~~~~~~~~~~-------------~~~--------~~ 1263 (4334)
T PRK05691 1211 LDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA-----EGV-SAIALDSLHL-------------DSW--------PS 1263 (4334)
T ss_pred cCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc-----cCc-eEEeeccccc-------------ccc--------CC
Confidence 99999999999999999999999987654433110 000 1111111100 000 01
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........++++++++|||||||.||||.++|+++.+.+......+ ++..++++++..|++|..++..++.++..
T Consensus 1264 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~s~~~~~~~L~~ 1338 (4334)
T PRK05691 1264 QAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATY-----ALDDSDVLMQKAPISFDVSVWECFWPLIT 1338 (4334)
T ss_pred CCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHHHHHHHHHHHHhC
Confidence 1112234678999999999999999999999999999888776666 78899999999999999998888889999
Q ss_pred CceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 242 GASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 242 G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
|+++++.+. ++..+++.++++++|++.++|++++.+.+....
T Consensus 1339 G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~---------------------------------- 1384 (4334)
T PRK05691 1339 GCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA---------------------------------- 1384 (4334)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc----------------------------------
Confidence 999999853 889999999999999999999999887542100
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccC-CCccccCccCCCccC
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFP-DEMCMVGTAGPVSVY 395 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~-~~~~~~~~~G~~~~~ 395 (611)
..+++||.+++||+++++++.+.|.+.+ ++.++|.||+||++..++.... .......++|+|+++
T Consensus 1385 -------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~ 1451 (4334)
T PRK05691 1385 -------------AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGN 1451 (4334)
T ss_pred -------------ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCC
Confidence 0124899999999999999999998877 6899999999999876654322 122234689999999
Q ss_pred eeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc--------CCccccCceEEEccCCeEEEEeccC
Q 007257 396 SELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--------DGWFHTGDIGQILPNGVVKIIDRKK 467 (611)
Q Consensus 396 ~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~dG~l~~~GR~~ 467 (611)
++++|+| +++ .+++.|+.|||+|+|++++.||+++++.+.+.|. .+||+|||+|++++||.++++||.|
T Consensus 1452 ~~~~i~d-~~~--~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d 1528 (4334)
T PRK05691 1452 VLCRVLD-AEL--NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLD 1528 (4334)
T ss_pred CEEEEEC-CCC--CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccC
Confidence 9999998 554 4567788999999999999999999999999883 2499999999999999999999999
Q ss_pred CeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC--CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHH
Q 007257 468 NLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK--SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYIL 545 (611)
Q Consensus 468 d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (611)
++||+ +|++|+|.|||++|.+||+|.+|+|+...+. +.++|+++...+.. . . .
T Consensus 1529 ~qiki-~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~~~~~lva~~~~~~~~~--------~--------~--------~ 1583 (4334)
T PRK05691 1529 QQVKL-RGFRVEPEEIQARLLAQPGVAQAAVLVREGAAGAQLVGYYTGEAGQE--------A--------E--------A 1583 (4334)
T ss_pred cEEEE-CCEEcCHHHHHHHHHhCCCcceEEEEEeeCCCCCEEEEEEEeCCCCC--------C--------C--------H
Confidence 99998 8999999999999999999999999975533 57899988765320 0 0 1
Q ss_pred HHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHH
Q 007257 546 SELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLI 593 (611)
Q Consensus 546 ~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~ 593 (611)
+.|+++++ ..||.|++|..++.+++. |+|++||++|++|.+
T Consensus 1584 ~~l~~~l~-~~Lp~y~vP~~~~~~~~l------P~t~~GKidr~~L~~ 1624 (4334)
T PRK05691 1584 ERLKAALA-AELPEYMVPAQLIRLDQM------PLGPSGKLDRRALPE 1624 (4334)
T ss_pred HHHHHHHH-HhCccccCCcEEEEcccc------CCCCCCCcChhhcCc
Confidence 23445554 789999999999988665 999999999999965
No 112
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.3e-57 Score=492.25 Aligned_cols=500 Identities=17% Similarity=0.185 Sum_probs=360.4
Q ss_pred ccccCCCCCceeeeccccC---CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 2 SVQKYPGNRMLGWRPFVDG---KFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~---~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
+|..+||++|+++. +. ..+..+++||.||.+++.++|++|.+.| .+||+|+++++|++++++++|||+++|++
T Consensus 10 ~a~~~p~~~a~~~~---~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~~~G~v 85 (578)
T PRK05850 10 RASLQPDDAAFTFI---DYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGALQAGLI 85 (578)
T ss_pred HHhcCCCceEEEEE---ccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHHHcCce
Confidence 57789999999875 31 1233579999999999999999999999 68999999999999999999999999999
Q ss_pred EeeCCC---CCChhHHHHHHhhcCccEEEEcchhHHHHhcccccc-ccCccEEEEecCCcHHHHHHhhhCCCceeeHHHH
Q 007257 79 CVPLYD---TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRS-AQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEF 154 (611)
Q Consensus 79 ~~~l~~---~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (611)
++|+++ .++.+++.++|+.++++++++++.....+....... ......++..+... +
T Consensus 86 ~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 146 (578)
T PRK05850 86 AVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLD-------------------L 146 (578)
T ss_pred EEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccc-------------------c
Confidence 999997 457889999999999999999987665443211100 00111122221100 0
Q ss_pred HhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhccccc-ccccCCCCCCcEEEEecchhhHHHHH
Q 007257 155 LHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFL-DQFEDKMTVDDVYLSFLPLAHILDRV 233 (611)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~l~~~p~~~~~g~~ 233 (611)
.. ..........++++++++|||||||.||+|.++|.++...+......+ .........++++++..|++|..|+.
T Consensus 147 ~~---~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 223 (578)
T PRK05850 147 DS---PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLV 223 (578)
T ss_pred cc---CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhH
Confidence 00 000112234678999999999999999999999999987765543221 10011145678999999999999987
Q ss_pred H-HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHH-HHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 007257 234 I-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIH-EGIKKALEELRPLRRRIFDALYKYKLAW 306 (611)
Q Consensus 234 ~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (611)
. .+.+++.|+++++.+. ++..+++.+++++++++ .+|.++..+. ...... .
T Consensus 224 ~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~--~------------------- 281 (578)
T PRK05850 224 LGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDD--D------------------- 281 (578)
T ss_pred HHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchh--h-------------------
Confidence 6 6677999999998863 68999999999999865 5565543332 111000 0
Q ss_pred HhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC------CceeeccccCCCCCceeeccC
Q 007257 307 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC------AFLVQGYGLTETCGPTTVCFP 380 (611)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~------~~v~~~yG~tE~g~~~~~~~~ 380 (611)
... ..++++|.+++||+++++++.++|.+.++ ..+++.||+||++..+.....
T Consensus 282 -------------~~~--------~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~ 340 (578)
T PRK05850 282 -------------MAG--------LDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREP 340 (578)
T ss_pred -------------hcC--------cchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCC
Confidence 000 01148999999999999999999988762 369999999998865543221
Q ss_pred CCc------------------------cccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHh
Q 007257 381 DEM------------------------CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDL 436 (611)
Q Consensus 381 ~~~------------------------~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 436 (611)
... ....++|.|. +.++++++ +++ ..+++.|+.|||+|+|++++.||+++++.
T Consensus 341 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd-~~~-~~~~~~g~~Gel~v~g~~~~~gY~~~~~~ 417 (578)
T PRK05850 341 GQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVD-PDT-CIECPAGTVGEIWVHGDNVAAGYWQKPEE 417 (578)
T ss_pred CCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEc-CCC-CcCCCCCCEEEEEEecCcccccccCChhh
Confidence 110 0011334443 57888887 433 35567889999999999999999999999
Q ss_pred hhhhcc------------CCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC
Q 007257 437 TRESII------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK 504 (611)
Q Consensus 437 ~~~~~~------------~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~ 504 (611)
+++.|. +|||+|||+|+++ ||++++.||.+|+|++ +|++|+|.+||++|.+||.+ +++|++.++.
T Consensus 418 t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~ 494 (578)
T PRK05850 418 TERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV-DGRNHYPDDIEATIQEITGG-RVAAISVPDD 494 (578)
T ss_pred hHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE-CCeecCHHHHHHHHHHhcCC-cEEEEEecCC
Confidence 998883 4799999999997 9999999999999997 99999999999999999995 4777776654
Q ss_pred --CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCcccc
Q 007257 505 --SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTA 582 (611)
Q Consensus 505 --~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~ 582 (611)
+.++|+|++++... ... ........+.+.+...+. . +....|..+.+++. +.+|+|+
T Consensus 495 ~~~~~~a~v~~~~~~~--------~~~------~~~~~~~~l~~~v~~~l~-~--~~~~~~~~~~~~~~----~~iP~t~ 553 (578)
T PRK05850 495 GTEKLVAIIELKKRGD--------SDE------EAMDRLRTVKREVTSAIS-K--SHGLSVADLVLVAP----GSIPITT 553 (578)
T ss_pred CceEEEEEEEeccccC--------cch------hhhhhHHHHHHHHHHHHH-H--HhCCCceEEEEeCC----CCcCCCC
Confidence 47889988775421 000 000123344444444332 1 11234666777641 3469999
Q ss_pred ccccchHHHHHHHHH
Q 007257 583 TLKKKRNKLLIYYQV 597 (611)
Q Consensus 583 ~GKv~R~~l~~~~~~ 597 (611)
+||++|+++++.|++
T Consensus 554 ~GKi~R~~l~~~~~~ 568 (578)
T PRK05850 554 SGKIRRAACVEQYRQ 568 (578)
T ss_pred CchHHHHHHHHHHHc
Confidence 999999999999866
No 113
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-56 Score=511.39 Aligned_cols=478 Identities=15% Similarity=0.124 Sum_probs=352.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+++||++|+++. + +.+||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++|
T Consensus 456 ~a~~~pd~~Al~~~---~------~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vp 526 (994)
T PRK07868 456 QARDAPKGEFLLFD---G------RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVL 526 (994)
T ss_pred HHHHCCCCeEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 57889999999875 3 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|. .++.++++.++++++|+++.....+... ...+++++....... ..........++++.......
T Consensus 527 l~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~-------~~~iiv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 594 (994)
T PRK07868 527 MPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL-------PGRVLVLGGGESRDL--DLPDDADVIDMEKIDPDAVEL 594 (994)
T ss_pred eCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc-------CceEEEecCCccccc--cCCcchhhhhhhhcCcccccC
Confidence 9985 6899999999999999987766544221 123444432210000 000000001111110000000
Q ss_pred C--CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHH-
Q 007257 162 E--MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYF- 238 (611)
Q Consensus 162 ~--~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~- 238 (611)
+ ....+..++++++++|| ||||.||++.++|.++..........+ .+..+|++++..|++|.+++...+.+
T Consensus 595 ~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-----~l~~~d~~L~~~Pl~h~~gl~~~l~~~ 668 (994)
T PRK07868 595 PGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-----ALDRRDTVYCLTPLHHESGLLVSLGGA 668 (994)
T ss_pred CcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-----CCCCCCeEEEecChHHHhHHHHHHHHH
Confidence 0 01112246899999999 577777777778766554433333333 67889999999999999999876555
Q ss_pred hhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 239 FRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 239 l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
+..|+++++.+. ++..+++.|+++++|+++++|+++..|.+.....
T Consensus 669 l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~--------------------------------- 715 (994)
T PRK07868 669 VVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFV--------------------------------- 715 (994)
T ss_pred hccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCc---------------------------------
Confidence 555555655554 9999999999999999999999998886521000
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC-CceeeccccCCCCCceeeccCCCccccCccCCCccCe
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYS 396 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~ 396 (611)
...++++|.++ |+.+++++.+.+.+.++ +++++.||+||++...... . ....+++|+|++++
T Consensus 716 ------------~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~-~--~~~~~svG~p~pg~ 778 (994)
T PRK07868 716 ------------LHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANV-S--GAKIGSKGRPLPGA 778 (994)
T ss_pred ------------cCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeeccccccccccc-C--CCCCcccCCccCCC
Confidence 00114789776 34599999999999886 8899999999987654322 1 23447999999998
Q ss_pred -eEEEeec----------CCCCCCCCCCCCCcEEEEecCCcccccCCChHhh--hhhc--cCCccccCceEEEccCCeEE
Q 007257 397 -ELRLEEV----------PEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLT--RESI--IDGWFHTGDIGQILPNGVVK 461 (611)
Q Consensus 397 -~v~i~~~----------~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~--~~~~--~~g~~~TGD~~~~~~dG~l~ 461 (611)
++++... +++....++.|+.|||+++++.. + +++.+ +..| .+|||+|||+|++|+||+|+
T Consensus 779 ~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~ 853 (994)
T PRK07868 779 GRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYW 853 (994)
T ss_pred CceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEE
Confidence 6776521 11211345678899999999753 3 34433 2234 37999999999999999999
Q ss_pred EEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC--CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHH
Q 007257 462 IIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK--SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQ 539 (611)
Q Consensus 462 ~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (611)
++||.||+||+ +|.+|+|.|||++|.+||+|.+|+|++.++. +.++|+|+++++.. . +
T Consensus 854 ~~GR~dd~Ik~-~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~~~~~~a~Vv~~~~~~--------~--------~--- 913 (994)
T PRK07868 854 LVDRRGSVIRT-ARGPVYTEPVTDALGRIGGVDLAVTYGVEVGGRQLAVAAVTLRPGAA--------I--------T--- 913 (994)
T ss_pred EeccCCCEEEe-CCceEcHHHHHHHHhcCCCeeEEEEEeecCCCCceEEEEEEeCCCCc--------C--------C---
Confidence 99999999997 7889999999999999999999999998765 37899999875420 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 540 LQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 540 ~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
.++|+++++ + +|.|++|+.|+++++. |+|++||++|++|++.
T Consensus 914 -----~~~L~~~l~-~-l~~y~vP~~i~~v~~l------P~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 914 -----AADLTEALA-S-LPVGLGPDIVHVVPEI------PLSATYRPTVSALRAA 955 (994)
T ss_pred -----HHHHHHHHH-h-CCCCcCCeEEEEeCCC------CCCccccEehHHHHhc
Confidence 134555654 3 8999999999999765 9999999999999865
No 114
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-56 Score=486.70 Aligned_cols=484 Identities=21% Similarity=0.247 Sum_probs=361.4
Q ss_pred cccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 3 VQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 3 a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
++++|+.+ +++. .+..++.+||.||..++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 31 ~~~~~~~~-~~~~-----~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i 104 (579)
T PRK09192 31 ALGEAGMN-FYDR-----RGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPL 104 (579)
T ss_pred hccCCceE-EEec-----CCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEec
Confidence 45566444 3332 23345899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-------hhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH
Q 007257 83 YDTLG-------PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL 155 (611)
Q Consensus 83 ~~~~~-------~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (611)
++..+ .+++.++++.++++++++++.....+...... ...++ ..++..+.
T Consensus 105 ~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~----~~~~~-------------------~~~~~~~~ 161 (579)
T PRK09192 105 PLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHG----NPLLH-------------------VLSHAWFK 161 (579)
T ss_pred cCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcc----ccccc-------------------eeehhhhc
Confidence 86543 57899999999999999998765544322110 00111 11222222
Q ss_pred hcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhccc-ccccccCCCCCCcEEEEecchhhHHHHHH
Q 007257 156 HLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDL-FLDQFEDKMTVDDVYLSFLPLAHILDRVI 234 (611)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~~~~g~~~ 234 (611)
... ..........++++++++|||||||.||+|.++|+++...+..... .+ ++..+|++++.+|++|.+++..
T Consensus 162 ~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~ 235 (579)
T PRK09192 162 ALP-EADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-----KVRPGDRCVSWLPFYHDMGLVG 235 (579)
T ss_pred ccC-CCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-----cCCCCCeEEEeCCCCCcchhHH
Confidence 111 1111223356789999999999999999999999999988776554 44 6788999999999999999886
Q ss_pred H-HHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh
Q 007257 235 E-EYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN 308 (611)
Q Consensus 235 ~-~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (611)
. +.++..|+++++.+. ++..+++.+.++++|+++..|..+..+.......
T Consensus 236 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~------------------------ 291 (579)
T PRK09192 236 FLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK------------------------ 291 (579)
T ss_pred HHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc------------------------
Confidence 4 446888988877652 6889999999999998777555554443211000
Q ss_pred hcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcC------CceeeccccCCCCCceeeccCCC
Q 007257 309 MGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC------AFLVQGYGLTETCGPTTVCFPDE 382 (611)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~------~~v~~~yG~tE~g~~~~~~~~~~ 382 (611)
.....+ ++++|.+++||+++++.+.+.+.+.++ ..+++.||+||+++.++......
T Consensus 292 ----------~~~~~~--------l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~ 353 (579)
T PRK09192 292 ----------DLAELD--------LSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGS 353 (579)
T ss_pred ----------cccccc--------hhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCC
Confidence 000011 248999999999999999999888763 34999999999987665433211
Q ss_pred c---------------------------cccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChH
Q 007257 383 M---------------------------CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPD 435 (611)
Q Consensus 383 ~---------------------------~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 435 (611)
. ....++|.++|++++++++ +++ ..++.++.|||+++|+.++.||+++ +
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~--~~~~~g~~Gel~i~g~~~~~gY~~~-~ 429 (579)
T PRK09192 354 GIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAG--MPLPERVVGHICVRGPSLMSGYFRD-E 429 (579)
T ss_pred CceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCC--CCCCCCCEEEEEecCCchhhhhcCC-c
Confidence 0 0124789999999999998 554 3456678999999999999999999 5
Q ss_pred hhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcc--eEEEEecCCC--CeEEEE
Q 007257 436 LTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIE--DIWVYGDSLK--SMLVAV 510 (611)
Q Consensus 436 ~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~--~~~v~~~~~~--~~~~a~ 510 (611)
.+.+.+ .+|||+|||+|++ ++|++++.||.||+|++ +|++|+|.+||++|++||+|. +|+|++.++. +.++++
T Consensus 430 ~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~~~~~~~ 507 (579)
T PRK09192 430 ESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIII-NGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQENGEKIVLL 507 (579)
T ss_pred cccccccCCceeeccceeeE-ECCEEEEEeccccEEEE-CCCccCHHHHHHHHHhcCCccCCcEEEEEeccCCCeeEEEE
Confidence 555555 7899999999999 99999999999999997 999999999999999999998 8999987654 367777
Q ss_pred EecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHH
Q 007257 511 VVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNK 590 (611)
Q Consensus 511 vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~ 590 (611)
++..... ....+.+.+.+.+.+. +.+..|..+.+++. +.+|+|++||++|++
T Consensus 508 v~~~~~~--------------------~~~~~~l~~~~~~~l~----~~~~~~~~i~~~~~----~~lP~t~~GKv~R~~ 559 (579)
T PRK09192 508 VQCRISD--------------------EERRGQLIHALAALVR----SEFGVEAAVELVPP----HSLPRTSSGKLSRAK 559 (579)
T ss_pred EEecCCC--------------------hHHHHHHHHHHHHHHH----HHhCCCceEEEeCC----CCcCCCCCcchhHHH
Confidence 7765421 1112223333333221 23566777777742 346999999999999
Q ss_pred HHHHHHH
Q 007257 591 LLIYYQV 597 (611)
Q Consensus 591 l~~~~~~ 597 (611)
|++.|..
T Consensus 560 l~~~~~~ 566 (579)
T PRK09192 560 AKKRYLS 566 (579)
T ss_pred HHHHHHc
Confidence 9999876
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.5e-55 Score=474.00 Aligned_cols=484 Identities=17% Similarity=0.172 Sum_probs=360.2
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|+..|+.+++... ++ .+.+||.||+++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++++
T Consensus 11 ~~~~~~~~~~~~~~---~~----~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~ 83 (545)
T PRK07768 11 NARTSPRGMVTGEP---DA----PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTM 83 (545)
T ss_pred HhhCCCcceEEecC---CC----ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccc
Confidence 47788999988765 32 268999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHH-------HHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHH
Q 007257 82 LYDTLGPGAV-------NFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEF 154 (611)
Q Consensus 82 l~~~~~~~~l-------~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (611)
+++..+.+++ .++++.++++.+++++........ ... . ......++++
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~--~----------------------~~~~~~~~~l 138 (545)
T PRK07768 84 LHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPV-LEE--K----------------------GIRVLTVADL 138 (545)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhh-hcc--c----------------------CCceeehhhh
Confidence 9988876654 446777899999998754332211 000 0 0112334444
Q ss_pred HhcccccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCC-cEEEEecchhhHHHHH
Q 007257 155 LHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVD-DVYLSFLPLAHILDRV 233 (611)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~p~~~~~g~~ 233 (611)
..... .......++++++++|||||||.||+|.++|.++...+......+ ++..+ |++++.+|++|..++.
T Consensus 139 ~~~~~---~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~p~~~~~g~~ 210 (545)
T PRK07768 139 LAADP---IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-----EFDVETDVMVSWLPLFHDMGMV 210 (545)
T ss_pred cccCC---CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-----CCCCCCceeEEeCCCccchHHH
Confidence 33211 122345679999999999999999999999999988877665554 56665 8999999999999987
Q ss_pred H-HHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 007257 234 I-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 307 (611)
Q Consensus 234 ~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (611)
. ++.++..|++++++.. ++..+...++++++|++.++|..+..+...+......
T Consensus 211 ~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------------------- 270 (545)
T PRK07768 211 GFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKP-------------------- 270 (545)
T ss_pred HHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccc--------------------
Confidence 6 4556899999988754 6788899999999999988887776665432111000
Q ss_pred hhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHH---cCC---ceeeccccCCCCCceeeccCC
Q 007257 308 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVT---CCA---FLVQGYGLTETCGPTTVCFPD 381 (611)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~---~~~---~v~~~yG~tE~g~~~~~~~~~ 381 (611)
.. ..++++|.++++|+++++...+++.+. +|. .+++.||+||++..+......
T Consensus 271 -------------~~--------~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~ 329 (545)
T PRK07768 271 -------------GA--------FDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCG 329 (545)
T ss_pred -------------cC--------CCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCC
Confidence 00 112489999999999999999998774 455 499999999998765443221
Q ss_pred C-------------------------ccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHh
Q 007257 382 E-------------------------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDL 436 (611)
Q Consensus 382 ~-------------------------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~ 436 (611)
. ....+++|+|++++++++++ +++ .+++.++.|||+++|+.++.||++++..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~ 406 (545)
T PRK07768 330 AGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDG--QVLPPRGVGVIELRGESVTPGYLTMDGF 406 (545)
T ss_pred CCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCC--CCCCCCCEEEEEEccCcccccccCCCCC
Confidence 1 11236889999999999998 555 3456778999999999999999987655
Q ss_pred hhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecC--CC---CeEEEEE
Q 007257 437 TRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDS--LK---SMLVAVV 511 (611)
Q Consensus 437 ~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~--~~---~~~~a~v 511 (611)
....+.+|||+|||+++++++|+++++||.+|+|++ +|.+|+|.+||+.|.++|+|.++.|++.. +. +.+++++
T Consensus 407 ~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v 485 (545)
T PRK07768 407 IPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIM-AGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAV 485 (545)
T ss_pred cccccCCCeeeccceEEEecCCEEEEEccccceEEE-CCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEE
Confidence 544446889999999999999999999999999997 89999999999999999999998777532 22 2344444
Q ss_pred ecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHH
Q 007257 512 VPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKL 591 (611)
Q Consensus 512 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l 591 (611)
+..... .......+.+.+++.+. ..+ ...|..+.+++. +.+|+|++||++|+.+
T Consensus 486 ~~~~~~-------------------~~~~~~~l~~~~~~~l~-~~~--~~~p~~v~~v~~----~~lP~t~~GKi~r~~l 539 (545)
T PRK07768 486 ESNAFE-------------------DPAEVRRIRHQVAHEVV-AEV--GVRPRNVVVLGP----GSIPKTPSGKLRRANA 539 (545)
T ss_pred Eecccc-------------------cHHHHHHHHHHHHHHHH-HHh--CCCccEEEEeCC----CcCCCCCchhHHHHHH
Confidence 333211 11111222333333221 111 145777888752 2469999999999999
Q ss_pred HHHHH
Q 007257 592 LIYYQ 596 (611)
Q Consensus 592 ~~~~~ 596 (611)
+++|.
T Consensus 540 ~~~~~ 544 (545)
T PRK07768 540 AELVT 544 (545)
T ss_pred HHhcC
Confidence 99874
No 116
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-54 Score=454.25 Aligned_cols=397 Identities=16% Similarity=0.111 Sum_probs=332.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEE
Q 007257 26 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFV 105 (611)
Q Consensus 26 ~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~ 105 (611)
+++||.||.++++++|..|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..++++++++++++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 85 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLY 85 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEe
Confidence 69999999999999999985 68999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCC
Q 007257 106 QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGD 185 (611)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~ 185 (611)
++..... . ......++++++++|||||||.
T Consensus 86 ~~~~~~~------------------~--------------------------------~~~~~~~~~~~~i~~TSGtTG~ 115 (414)
T PRK08308 86 GESDFTK------------------L--------------------------------EAVNYLAEEPSLLQYSSGTTGE 115 (414)
T ss_pred cCccccc------------------c--------------------------------cCCCCCCCCceEEEECCCCCCC
Confidence 7631000 0 0012356789999999999999
Q ss_pred CceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhhcCceEEEecC-ChHHHHHHHhhhc
Q 007257 186 PKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELK 263 (611)
Q Consensus 186 pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~ 263 (611)
||+|.++|+++...+..+...+ ....+++++...|++|.+|+.. .+.++..|+++++.+. ++..+++.+++++
T Consensus 116 PKgv~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~ 190 (414)
T PRK08308 116 PKLIRRSWTEIDREIEAYNEAL-----NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTP 190 (414)
T ss_pred CcEEEEehHhHHHHHHHHHHhh-----CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhC
Confidence 9999999999998887766655 6778899999999999999865 6667899999988876 9999999999999
Q ss_pred CeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEec
Q 007257 264 PTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGG 343 (611)
Q Consensus 264 ~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 343 (611)
+|+++++|.++..+.+.... ..+++.++++|
T Consensus 191 ~t~~~~~P~~~~~l~~~~~~-------------------------------------------------~~~l~~~~~~G 221 (414)
T PRK08308 191 QHILYAVPLMLHILGRLLPG-------------------------------------------------TFQFHAVMTSG 221 (414)
T ss_pred CeEEEcCHHHHHHHHhcCCc-------------------------------------------------cccccEEEEcc
Confidence 99999999999887642110 02678899999
Q ss_pred CCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEec
Q 007257 344 APLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG 423 (611)
Q Consensus 344 ~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~ 423 (611)
+++++++.+.+++. +.++++.||+||++++..... ....+++|+|++++++++.+ + .++.|||++++
T Consensus 222 ~~l~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~---~~~~~~~G~p~~~~~~~~~~-~--------~~~~gel~v~~ 288 (414)
T PRK08308 222 TPLPEAWFYKLRER-TTYMMQQYGCSEAGCVSICPD---MKSHLDLGNPLPHVSVSAGS-D--------ENAPEEIVVKM 288 (414)
T ss_pred CCCCHHHHHHHHHh-CChhhhccCccccCCeeecCC---CCCCCccCccCCCeEEEEec-C--------CCCCceEEEEc
Confidence 99999999999886 678999999999986543221 22347899999999998875 2 23479999986
Q ss_pred CCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCC
Q 007257 424 KTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSL 503 (611)
Q Consensus 424 ~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~ 503 (611)
. ++||+|||+|++++||++++.||.||+|++ +|++|+|.+||+++.++|+|.+|+|++.++
T Consensus 289 ~------------------~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~ 349 (414)
T PRK08308 289 G------------------DKEIFTKDLGYKSERGTLHFMGRMDDVINV-SGLNVYPIEVEDVMLRLPGVQEAVVYRGKD 349 (414)
T ss_pred C------------------CceEECCceEEECCCccEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccC
Confidence 2 679999999999999999999999999997 899999999999999999999999998775
Q ss_pred C---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCcc
Q 007257 504 K---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLV 580 (611)
Q Consensus 504 ~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~ 580 (611)
. +.+.++++..... +. ++++++++ ++|+.|++|..+++++.. |+
T Consensus 350 ~~~~~~~~~~v~~~~~~------------------~~--------~~l~~~l~-~~l~~~~~P~~i~~v~~i------P~ 396 (414)
T PRK08308 350 PVAGERVKAKVISHEEI------------------DP--------VQLREWCI-QHLAPYQVPHEIESVTEI------PK 396 (414)
T ss_pred CCCCceEEEEEEeCCCC------------------CH--------HHHHHHHH-HhCccccCCcEEEEeccC------CC
Confidence 5 3677887765421 11 23444443 679999999999998665 99
Q ss_pred ccccccchHHHH
Q 007257 581 TATLKKKRNKLL 592 (611)
Q Consensus 581 t~~GKv~R~~l~ 592 (611)
|++||++|+.|+
T Consensus 397 t~~GKi~r~~~~ 408 (414)
T PRK08308 397 NANGKVSRKLLE 408 (414)
T ss_pred CCCcCeehhhhh
Confidence 999999999653
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=6.7e-55 Score=458.77 Aligned_cols=400 Identities=31% Similarity=0.465 Sum_probs=312.9
Q ss_pred CccccCCCCCceee-eccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEE
Q 007257 1 MSVQKYPGNRMLGW-RPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLIC 79 (611)
Q Consensus 1 ~~a~~~pd~~a~~~-~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 79 (611)
++|+++||++|+++ . + +++||+||+++++++|..|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 3 ~~a~~~pd~~a~~~~~----~-----~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~ 73 (417)
T PF00501_consen 3 RQAQRYPDRIALIDDE----G-----RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIP 73 (417)
T ss_dssp HHHHHSTTSEEEEETT----T-----EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EE
T ss_pred hHHhhCCCceEEEECC----C-----EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccc
Confidence 46899999999998 4 3 899999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCChhHHHHHHhhcCccEEEE----cchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHH
Q 007257 80 VPLYDTLGPGAVNFILDHAEIDFVFV----QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFL 155 (611)
Q Consensus 80 ~~l~~~~~~~~l~~~l~~~~~~~li~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (611)
+|++|.++.+++.++|+.++++++|+ +......+.... ........++.++..... ..+.+.
T Consensus 74 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------------~~~~~~ 139 (417)
T PF00501_consen 74 VPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIF-KQEDPSSSIIILDRDDLP-------------KKEALK 139 (417)
T ss_dssp EEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHH-TTSTTTEEEEEESHSSCT-------------TCHHHH
T ss_pred cccccccccccccccccccceeEEEEeccccccccccchhhh-cccccccccccccccccc-------------cccccc
Confidence 99999999999999999999999997 222212121111 111233445555532210 000011
Q ss_pred hcccccCCcCCC-CCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHH-H
Q 007257 156 HLGKVNEMEILP-PQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR-V 233 (611)
Q Consensus 156 ~~~~~~~~~~~~-~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~ 233 (611)
......... .+ ..++++++++|||||||.||+|.++|+++.+.+..+. +... .+++ |++++..|++|.+|+ .
T Consensus 140 ~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~-~~~~--d~~l~~~p~~~~~g~~~ 213 (417)
T PF00501_consen 140 SASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEY-FGLG--DRILSFLPLSHIFGLIS 213 (417)
T ss_dssp HHHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHT-TTTT--TEEEESS-TTSHHHHHH
T ss_pred ccccccccc-cCCCCccceeEeeccccccccccccccccccccccccccc--cccc-cccC--ceEEeeccccccccccc
Confidence 000000000 00 0578999999999999999999999999999887754 1110 1223 699999999999999 6
Q ss_pred HHHHHhhcCceEEEecC-C---hHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhh
Q 007257 234 IEEYFFRRGASVGYYHG-D---LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 309 (611)
Q Consensus 234 ~~~~~l~~G~~~~~~~~-~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (611)
.++.++..|+++++++. . +..+++.++++++|+++++|.++..+++..+.. ...
T Consensus 214 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~~~--------------------- 271 (417)
T PF00501_consen 214 ALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEK-TKI--------------------- 271 (417)
T ss_dssp HHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-HHG---------------------
T ss_pred cccccccccccccccccccccccccchhccccccccccccccccccccccccccc-ccc---------------------
Confidence 68889999999999987 2 477899999999999999999999987621110 000
Q ss_pred cCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCC-ceeeccccCCCCCceeecc-CCCccccC
Q 007257 310 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCF-PDEMCMVG 387 (611)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~~~~-~~~~~~~~ 387 (611)
....++++|.++++|+++++++.+.+++.++. +|++.||+||++.+++... .......+
T Consensus 272 -------------------~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~ 332 (417)
T PF00501_consen 272 -------------------SKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPG 332 (417)
T ss_dssp -------------------TTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTT
T ss_pred -------------------cccccccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccc
Confidence 00012479999999999999999999999987 9999999999999998664 23334557
Q ss_pred ccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccC-CccccCceEEEccCCeEEEEecc
Q 007257 388 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVVKIIDRK 466 (611)
Q Consensus 388 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~dG~l~~~GR~ 466 (611)
++|.|+++++++|+| +++ ..+++.|+.|||+|+||+++.||+++++.+.+.|.+ |||+|||+|++|+||+++++||.
T Consensus 333 ~~G~~~~~~~~~ivd-~~~-~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~ 410 (417)
T PF00501_consen 333 SVGKPLPGVEVKIVD-PNT-GEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRS 410 (417)
T ss_dssp SEBEESTTEEEEEEC-TTT-SSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEG
T ss_pred ccccccccccccccc-ccc-cccccccccccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEee
Confidence 899999999999998 442 356678889999999999999999999999999965 89999999999999999999999
Q ss_pred CCeEEc
Q 007257 467 KNLIKI 472 (611)
Q Consensus 467 ~d~i~~ 472 (611)
||+||+
T Consensus 411 ~~~i~~ 416 (417)
T PF00501_consen 411 DDMIKV 416 (417)
T ss_dssp SCEEEE
T ss_pred CCEEEe
Confidence 999996
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1e-52 Score=414.32 Aligned_cols=489 Identities=19% Similarity=0.180 Sum_probs=373.0
Q ss_pred CccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 1 MSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 1 ~~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
++|+++||++|+++. +. .+++||+|+++.++++|++|...|++.||.||++|+|.+|++.+.|+++++|++..
T Consensus 85 ~~vrr~p~k~aii~~---~~----~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA 157 (649)
T KOG1179|consen 85 SQVRRQPDKPAIIYE---GP----FQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITA 157 (649)
T ss_pred HHHHhCCCccEEEEe---CC----CceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceee
Confidence 368999999999998 32 26999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
.||+++..+.|.|.|+.++|+++|++.+..+.+.+...........++..+.... .....++...++....
T Consensus 158 ~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~---------~~g~~~L~~~l~~~~~ 228 (649)
T KOG1179|consen 158 FINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSV---------PDGIESLLAKLSAAPK 228 (649)
T ss_pred eeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCC---------CchHHHHHHhhccccc
Confidence 9999999999999999999999999999887776653322222223333322211 0111122222222222
Q ss_pred cC---CcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HH
Q 007257 161 NE---MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EE 236 (611)
Q Consensus 161 ~~---~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~ 236 (611)
.+ .........++++.+|||||||.||+.+++|......+..+...+ ++++.|+++..+|++|..+.+. +.
T Consensus 229 ~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-----g~~~~DvvY~~lPLYHsaa~ilGi~ 303 (649)
T KOG1179|consen 229 HPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-----GMTADDVVYTTLPLYHSAAGILGIG 303 (649)
T ss_pred CCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEcchhHHHHHHHHHHH
Confidence 22 122334667899999999999999999999999888887676666 8999999999999999999887 56
Q ss_pred HHhhcCceEEEecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007257 237 YFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQRE 315 (611)
Q Consensus 237 ~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (611)
.++..|+|+++-.. ++..+|+...+|++|+......+++.|++......++
T Consensus 304 ~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er---------------------------- 355 (649)
T KOG1179|consen 304 GCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEER---------------------------- 355 (649)
T ss_pred HHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhc----------------------------
Confidence 67999999999887 9999999999999999999999998887632221111
Q ss_pred cchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCc-eeeccccCCCCCceeeccCCCccccCccCCC--
Q 007257 316 ASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAF-LVQGYGLTETCGPTTVCFPDEMCMVGTAGPV-- 392 (611)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~-v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~-- 392 (611)
...+|..+ |..+.++.++.|.++||++ |.+.||+||........ .+. .|.+|+.
T Consensus 356 -----------------~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~-d~~---vGA~G~~~~ 412 (649)
T KOG1179|consen 356 -----------------QHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNY-DGR---VGACGFMSR 412 (649)
T ss_pred -----------------CceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeee-cCc---cccccchhh
Confidence 12566655 7789999999999999866 99999999987654433 221 1333321
Q ss_pred -----ccCeeEE--------EeecCCCCCCCCCCCCCcEEEEe--cCCc---ccccCCChHhhhhh-----cc--CCccc
Q 007257 393 -----SVYSELR--------LEEVPEMGYSPLDDPPCGEVCVR--GKTL---FSGYYKNPDLTRES-----II--DGWFH 447 (611)
Q Consensus 393 -----~~~~~v~--------i~~~~~~~~~~~~~~~~Gel~v~--~~~~---~~gy~~~~~~~~~~-----~~--~g~~~ 447 (611)
.|-.-++ +.| +++-..++++||.|.++-+ .... +.||.+..+.+.+. |. |-||.
T Consensus 413 ~~~~l~p~~LIk~D~~t~E~iRd-~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~ 491 (649)
T KOG1179|consen 413 LLKLLYPFRLIKVDPETGEPIRD-SQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFN 491 (649)
T ss_pred hhhhccceEEEEecCCCCceeec-CCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEe
Confidence 1111111 122 3444466788999976532 2333 78999977666543 42 44999
Q ss_pred cCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCC----CeEEEEEecChHHHHHHHH
Q 007257 448 TGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLK----SMLVAVVVPCEEDTKKWAY 523 (611)
Q Consensus 448 TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~----~~~~a~vv~~~~~~~~~~~ 523 (611)
|||+-.+|+.|++|+.+|..|++.. +|+||++.|||.+|....++.||.|+|+.-+ +.-.|.|+.+++..
T Consensus 492 tGDlLv~D~~GylYF~DRtGDTFRW-KGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~----- 565 (649)
T KOG1179|consen 492 TGDLLVADELGYLYFKDRTGDTFRW-KGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTE----- 565 (649)
T ss_pred eCcEEEEecCCcEEEeccCCCceee-cCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCccc-----
Confidence 9999999999999999999999999 9999999999999999999999999986533 25556666555331
Q ss_pred HCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHH
Q 007257 524 SNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIY 594 (611)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~ 594 (611)
...+ ++-..+ +..||+|.+|..+.+.++. ++|.+-|.+|..|.+.
T Consensus 566 ---------------~d~~----~l~~~l-~~~LP~YA~P~FlRl~~~i------~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 566 ---------------KDLE----KLYQHL-RENLPSYARPRFLRLQDEI------EKTGTFKLQKTELQKE 610 (649)
T ss_pred ---------------chHH----HHHHHH-HhhCccccchHHHHHHhhh------hcccchhhHHHHHHHc
Confidence 1122 333333 4789999999999999876 8999999999998764
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.1e-51 Score=431.08 Aligned_cols=389 Identities=25% Similarity=0.321 Sum_probs=324.8
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 29 TYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 29 Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
||.||.+.+.++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 7999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccccCCcCCCCCCCCeEEEEEecCCCCCCc
Q 007257 108 KKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPK 187 (611)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK 187 (611)
.....+..... .++...... ..................++++++++|||||||.||
T Consensus 81 ~~~~~~~~~~~-------~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK 136 (408)
T TIGR01733 81 ALASRLAGLVL-------PIILVDPLE-----------------LAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPK 136 (408)
T ss_pred chhhhccccCC-------ceEEechhh-----------------hhhcccccccccccCCCCCCCcEEEEEcCCCCCCCC
Confidence 76654432211 111111110 000000000011111145789999999999999999
Q ss_pred eeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC----ChHHHHHHHhhhc
Q 007257 188 GVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG----DLNALRDDLMELK 263 (611)
Q Consensus 188 ~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~ 263 (611)
+|.+||+++...+......+ .+..++++++..|++|.+++..++.++..|+++++++. .+..+.+.+++++
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (408)
T TIGR01733 137 GVVVTHRSLVNLLAWLARRY-----GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHP 211 (408)
T ss_pred EEEeccHHHHHHHHHHHHhc-----CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcC
Confidence 99999999998888877655 77889999999999999998888899999999998876 2689999999999
Q ss_pred CeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEec
Q 007257 264 PTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGG 343 (611)
Q Consensus 264 ~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G 343 (611)
+|.+.++|.+++.+.+... ..++++|.+++||
T Consensus 212 ~t~l~~~p~~~~~l~~~~~------------------------------------------------~~~~~l~~v~~~g 243 (408)
T TIGR01733 212 VTVLNLTPSLLALLAAALP------------------------------------------------PALASLRLVILGG 243 (408)
T ss_pred ceEEEeCHHHHHHHHHhhh------------------------------------------------hcccCceEEEEeC
Confidence 9999999999999876422 1124899999999
Q ss_pred CCCCHHHHHHHHHHcC-CceeeccccCCCCCceeeccCCCc--c--ccCccCCCccCeeEEEeecCCCCCCCCCCCCCcE
Q 007257 344 APLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDEM--C--MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGE 418 (611)
Q Consensus 344 ~~l~~~~~~~~~~~~~-~~v~~~yG~tE~g~~~~~~~~~~~--~--~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Ge 418 (611)
+++++++.+.+.+.++ +.+++.||+||+++++........ . .+.++|.++++++++|++ ++ ..+++.|+.||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~--~~~~~~g~~Ge 320 (408)
T TIGR01733 244 EALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLD-DD--LRPVPVGVVGE 320 (408)
T ss_pred ccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEEC-CC--CCCCCCCCceE
Confidence 9999999999999997 899999999999987753322211 1 157899999999999998 55 35667788999
Q ss_pred EEEecCCcccccCCChHhhhhhccC-------C--ccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhc
Q 007257 419 VCVRGKTLFSGYYKNPDLTRESIID-------G--WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCV 489 (611)
Q Consensus 419 l~v~~~~~~~gy~~~~~~~~~~~~~-------g--~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~ 489 (611)
|+++|+.++.||+++++.+.+.|.. | ||+|||+|++|++|++++.||.+|++++ +|++++|.+||+.|..
T Consensus 321 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~-~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 321 LYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKI-RGYRIELGEIEAALLR 399 (408)
T ss_pred EEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEe-CeEEechHHHHHHHhc
Confidence 9999999999999999999888732 2 9999999999999999999999999997 9999999999999999
Q ss_pred CcCcceEEE
Q 007257 490 APIIEDIWV 498 (611)
Q Consensus 490 ~p~V~~~~v 498 (611)
+|.|.||+|
T Consensus 400 ~~~v~~~~v 408 (408)
T TIGR01733 400 HPGVREAVV 408 (408)
T ss_pred CcchhhhcC
Confidence 999999875
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=8.8e-44 Score=365.83 Aligned_cols=317 Identities=23% Similarity=0.292 Sum_probs=256.5
Q ss_pred CCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEE
Q 007257 167 PPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVG 246 (611)
Q Consensus 167 ~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~ 246 (611)
...++++++++|||||||.||+|.++|.++.......... +...++++...|++|.+++...+.++..|++++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~-------~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v 103 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR-------LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPV 103 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc-------cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEE
Confidence 3457899999999999999999999999998877654432 234578899999999999887888888999988
Q ss_pred Eec--C--ChHHHHHHHhhhc--CeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q 007257 247 YYH--G--DLNALRDDLMELK--PTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 320 (611)
Q Consensus 247 ~~~--~--~~~~~~~~i~~~~--~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (611)
++. . ++..+++.+++++ .++...+|..+..+......
T Consensus 104 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~------------------------------------- 146 (358)
T PRK07824 104 ELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA------------------------------------- 146 (358)
T ss_pred ecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-------------------------------------
Confidence 732 2 8899999999998 55666677766554321000
Q ss_pred HHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEE
Q 007257 321 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 400 (611)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 400 (611)
...+++++.+++||+++++++.+.+.+ +++++++.||+||++..+. ..|.|++++++++
T Consensus 147 ---------~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~YG~TE~~~~~~-----------~~G~~~~g~~v~i 205 (358)
T PRK07824 147 ---------TAALAELDAVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSETSGGCV-----------YDGVPLDGVRVRV 205 (358)
T ss_pred ---------cCCcccceEEEECCCCCCHHHHHHHHh-cCCcEEecccCCccCCCcC-----------cCceeCCCCEEEe
Confidence 001248999999999999999999886 4999999999999876432 2478999999998
Q ss_pred eecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhc-cCCccccCceEEEccCCeEEEEeccCCeEEcCCceecC
Q 007257 401 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVA 479 (611)
Q Consensus 401 ~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~ 479 (611)
.+ |||+++|+.++.||+++++.+ .| .+|||+|||+|++ ++|.+++.||.||+|++ +|++|+
T Consensus 206 ~~--------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~-~G~~v~ 267 (358)
T PRK07824 206 ED--------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAIST-GGLTVL 267 (358)
T ss_pred cC--------------CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEE-CCEEEC
Confidence 44 999999999999999988643 34 5789999999999 89999999999999997 999999
Q ss_pred cHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCC
Q 007257 480 LEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNK 556 (611)
Q Consensus 480 ~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 556 (611)
|.+||+.|.+||+|.+|+|++.++. +.++++++...+. . ...+.|.++++ +.
T Consensus 268 p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~--------------------~----~~~~~i~~~~~-~~ 322 (358)
T PRK07824 268 PQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGP--------------------A----PTLEALRAHVA-RT 322 (358)
T ss_pred HHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCC--------------------C----cCHHHHHHHHH-hh
Confidence 9999999999999999999997654 4788888765421 0 01233444443 67
Q ss_pred CCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 557 LRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 557 l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
|+.+++|..|+++++. |+|++||++|++|+++|.+
T Consensus 323 l~~~~~P~~i~~v~~l------P~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 323 LDRTAAPRELHVVDEL------PRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CccccCCCEEEEecCC------CCCCCccccHHHHHHHhhc
Confidence 9999999999998665 9999999999999998864
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-37 Score=344.84 Aligned_cols=399 Identities=22% Similarity=0.235 Sum_probs=322.5
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
+|.+.||++|+.+. + .++||+++..+++++|+.|.+.|+.+++.|+++++.++++++.++|++++|+.++|
T Consensus 236 ~a~~~p~~~a~~~~---~------~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP 306 (642)
T COG1020 236 QAATTPDAVALVRG---G------QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYVP 306 (642)
T ss_pred HHHhCCCceeEecC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEec
Confidence 46789999998875 2 59999999999999999999999999999999998899999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccccc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVN 161 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (611)
++|.++.+++..+++.++++.+++........... +. +..+... ......
T Consensus 307 ~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~---------------------~~~~~~ 356 (642)
T COG1020 307 LDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL-----PG----LALDDAL---------------------SEIPDT 356 (642)
T ss_pred CCCCChHHHHHHHHhhcCccEEEeccccccccccC-----Cc----ccccccc---------------------ccCCcc
Confidence 99999999999999999999999983321110000 00 1111000 000000
Q ss_pred CCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhc
Q 007257 162 EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR 241 (611)
Q Consensus 162 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 241 (611)
........+++.+|++|||||||.||||..+|+++.+.+......+ .....|+++...++.+.......+.++..
T Consensus 357 ~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-----~~~~~d~~l~~~s~~fD~~~~~~f~~l~~ 431 (642)
T COG1020 357 DPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARF-----GLDADDRVLALASLSFDASVFEIFGALLE 431 (642)
T ss_pred CcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhc-----CCCcccEEeecCCcccchhHHHHHHHHhC
Confidence 0112234568999999999999999999999999999777766665 78889999999999888888888999999
Q ss_pred CceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 007257 242 GASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 317 (611)
Q Consensus 242 G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (611)
|+++++... ++..+...+.++++|++..+|.++..+......... .
T Consensus 432 G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~-~----------------------------- 481 (642)
T COG1020 432 GARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDL-I----------------------------- 481 (642)
T ss_pred CCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccc-c-----------------------------
Confidence 999999875 899999999999999999999999888653110000 0
Q ss_pred hHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc--CCceeeccccCCCCCceeeccCCCccc-cCccCCCcc
Q 007257 318 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFLVQGYGLTETCGPTTVCFPDEMCM-VGTAGPVSV 394 (611)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~--~~~v~~~yG~tE~g~~~~~~~~~~~~~-~~~~G~~~~ 394 (611)
...+.++.+++||+.++..+...+.... ...+.+.||+||+.............. ...+|.|++
T Consensus 482 -------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~ 548 (642)
T COG1020 482 -------------SPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVA 548 (642)
T ss_pred -------------CCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeC
Confidence 0002489999999999999999887665 468999999999666554433222111 358899999
Q ss_pred CeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccC-CccccCceEEEccCCeEEEEeccCCeEEcC
Q 007257 395 YSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVVKIIDRKKNLIKIS 473 (611)
Q Consensus 395 ~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~ 473 (611)
+..+.+.+ .. ..+++.+..||+++.|.+++.||+++++.+.+.|.. .+|+|||++++..||.+.++||.|+++|+
T Consensus 549 n~~~~ild-~~--~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki- 624 (642)
T COG1020 549 NTQLYILD-QG--LRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKI- 624 (642)
T ss_pred CCeEEEEC-CC--CCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEe-
Confidence 99999988 33 356666778999999999999999999999999966 49999999999999999999999999998
Q ss_pred CceecCcHHHHHHHhcCc
Q 007257 474 QGEYVALEYLENVYCVAP 491 (611)
Q Consensus 474 ~G~~v~~~~iE~~l~~~p 491 (611)
.|.+|.+.+||..+.++|
T Consensus 625 ~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 625 RGFRIELGEIEAALAEQP 642 (642)
T ss_pred ceEecCcHHHHHHHhcCC
Confidence 899999999999998875
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=7.8e-37 Score=312.43 Aligned_cols=287 Identities=18% Similarity=0.123 Sum_probs=221.6
Q ss_pred CCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCC--CCCcEEEEecchhhHHHHHH-HHHHhhcCceEEE
Q 007257 171 FNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKM--TVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGY 247 (611)
Q Consensus 171 ~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~ 247 (611)
+..++++|||||||.||+|.+||+++...+..+...+ ++ ...+++++.+|++|.+|+.+ .+.++..|+++++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~ 169 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-----GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQ 169 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-----CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEe
Confidence 4478999999999999999999999988777665544 34 34468999999999999765 5667889999988
Q ss_pred ecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhH
Q 007257 248 YHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFR 326 (611)
Q Consensus 248 ~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (611)
.+. ++..+++.++.+ |+++++|.+++.+.+..
T Consensus 170 ~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~--------------------------------------------- 202 (386)
T TIGR02372 170 LAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD--------------------------------------------- 202 (386)
T ss_pred cCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC---------------------------------------------
Confidence 765 777888877653 89999999998875410
Q ss_pred HHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCC-ceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCC
Q 007257 327 KVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPE 405 (611)
Q Consensus 327 ~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~-~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~ 405 (611)
..+++++. ++||+++++++.+.+.+. +. .+++.||+||++++++...+ +..|.+.|+.++.+.+
T Consensus 203 ----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~~------~~~~~~~p~~~~~~~~--- 267 (386)
T TIGR02372 203 ----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREAP------DDPFRLLPDLACFADT--- 267 (386)
T ss_pred ----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccCC------CCCcccCCCccccCCC---
Confidence 01136775 678999999999999886 64 69999999999886554322 3346677776553311
Q ss_pred CCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHH
Q 007257 406 MGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLEN 485 (611)
Q Consensus 406 ~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~ 485 (611)
+. + .|+ ..|++|||++++|++|+|++.||.||+|++ +|++|+|.+||+
T Consensus 268 ~~----------~---~g~------------------~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~-~G~~V~p~eIE~ 315 (386)
T TIGR02372 268 LS----------S---AGL------------------ARRLDLQDRLAWDKDGGFTILGRKDEILQV-GGVNVSPGHVRD 315 (386)
T ss_pred cc----------C---CCc------------------cceeecCceEEEcCCCcEEEecccCCEEEE-CCEEEcHHHHHH
Confidence 10 0 021 125889999999999999999999999997 999999999999
Q ss_pred HHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeee
Q 007257 486 VYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKG 565 (611)
Q Consensus 486 ~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~ 565 (611)
+|.+||+|.+|+|+. ..+.+.|+|+++++. +. +.+.++|.++++ .+|+.|++|..
T Consensus 316 ~l~~~p~V~~~~v~~--~g~~~~a~vv~~~~~------------------~~----~~~~~~l~~~~~-~~L~~~~~P~~ 370 (386)
T TIGR02372 316 ILERNPRVRAAAVRL--DGRRLKAFIVVAEDA------------------DE----AELEIELRATAA-RHLPAPARPDR 370 (386)
T ss_pred HHHcCCCceEEEEEc--CCceEEEEEEECCCC------------------Ch----HHHHHHHHHHHH-HhCCCCCCCcE
Confidence 999999999999975 346888998887532 11 123345666665 67999999999
Q ss_pred EEEecCCCCCCCCccccccccc
Q 007257 566 VILDPRPFDMERDLVTATLKKK 587 (611)
Q Consensus 566 i~~~~~~~~~~~~P~t~~GKv~ 587 (611)
+.++++. |+|++||++
T Consensus 371 i~~~~~l------P~t~~GKi~ 386 (386)
T TIGR02372 371 FRFGTEL------PRTGAGKLA 386 (386)
T ss_pred EEEcccC------CCCCCCCcC
Confidence 9998765 999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.5e-33 Score=295.79 Aligned_cols=331 Identities=18% Similarity=0.152 Sum_probs=230.5
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHH-HHHHHhhcCceEEE
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRV-IEEYFFRRGASVGY 247 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~ 247 (611)
+.++++.+++||||||.||++.++|.++..........+.. .++..+|++++..++.+..+.. ..+.+...|++++.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~--~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 150 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRA--AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVP 150 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHH--cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEe
Confidence 45678899999999999999999999987654443322211 1677889988876655433322 34446778988887
Q ss_pred ecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhH
Q 007257 248 YHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFR 326 (611)
Q Consensus 248 ~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (611)
.+. ++..+++.|++++||+++++|+++..|++.........
T Consensus 151 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~-------------------------------------- 192 (422)
T TIGR02155 151 ISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDP-------------------------------------- 192 (422)
T ss_pred cCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCc--------------------------------------
Confidence 765 78999999999999999999999999876433211000
Q ss_pred HHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCC--ceeeccCCCccccCccCCCc--cCeeEEEee
Q 007257 327 KVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCG--PTTVCFPDEMCMVGTAGPVS--VYSELRLEE 402 (611)
Q Consensus 327 ~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~--~~~~~~~~~~~~~~~~G~~~--~~~~v~i~~ 402 (611)
...++|.++++|+++++++.+.+.+.||+++++.||+||+++ +...+... ..|.++ +...++|+|
T Consensus 193 -----~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~~------~~g~~~~~~~~~~eivd 261 (422)
T TIGR02155 193 -----AQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVET------QDGLHIWEDHFYPEIID 261 (422)
T ss_pred -----ccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeeccccc------CCCceEecCeeEEEEEC
Confidence 003799999999999999999999999999999999999853 22222111 112222 356667877
Q ss_pred cCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccC-C-----eEEEEeccCCeEEcCCce
Q 007257 403 VPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN-G-----VVKIIDRKKNLIKISQGE 476 (611)
Q Consensus 403 ~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~d-G-----~l~~~GR~~d~i~~~~G~ 476 (611)
+++ ..++++|+.|||++++. ++..|+.+||+|||+++++++ | .+++.||.+|+|++ +|.
T Consensus 262 -~~~-g~~v~~Ge~Gelvvt~~------------~~~~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~-~G~ 326 (422)
T TIGR02155 262 -PHT-GEVLPDGEEGELVFTTL------------TKEALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLII-RGV 326 (422)
T ss_pred -CCC-CCCCCCCCeeEEEEecC------------CccccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEE-CCE
Confidence 333 35667889999999973 234456789999999999876 4 46899999999997 899
Q ss_pred ecCcHHHHHHHhcCcCcc-eEEEEecCCC--CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHH
Q 007257 477 YVALEYLENVYCVAPIIE-DIWVYGDSLK--SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAE 553 (611)
Q Consensus 477 ~v~~~~iE~~l~~~p~V~-~~~v~~~~~~--~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 553 (611)
+|+|.+||++|.+||+|. ++.+...... +.+.+.|+...+... . ...+..+.+.++|.+.++
T Consensus 327 ~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~----------~-----~~~~~~~~~~~~i~~~~~ 391 (422)
T TIGR02155 327 NVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYT----------L-----RLHEQASLLAGEIQHTIK 391 (422)
T ss_pred EECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCccc----------c-----cchHHHHHHHHHHHHHHH
Confidence 999999999999999998 5544433222 367777776643200 0 011122233445555554
Q ss_pred hCCCCCcceeeeEEEecCCCCCCCCccccccccchH
Q 007257 554 RNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRN 589 (611)
Q Consensus 554 ~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~ 589 (611)
..+..+. .|.++. ++++|+|+ ||++|.
T Consensus 392 -~~~~~~~---~v~~~~----~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 392 -QEVGVSM---DVHLVE----PGSLPRSE-GKARRV 418 (422)
T ss_pred -hccCcEE---EEEEEC----CCCccCCC-CCceEE
Confidence 4454442 355542 24569988 999873
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=9.4e-32 Score=282.18 Aligned_cols=507 Identities=15% Similarity=0.131 Sum_probs=349.6
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
+|+++||++|+... +..+..-.++||++|+.+|.+++.+|... -+++||.|+++.++++|++++++||+.+|.+++
T Consensus 779 R~a~tp~~~a~~~~---n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPI 855 (1363)
T KOG3628|consen 779 RAAKTPDHIAFTTL---NARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPI 855 (1363)
T ss_pred HhhcCCCceEEEEe---ccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeee
Confidence 47789999999998 77777778999999999999999999988 589999999999999999999999999999999
Q ss_pred eCCCCC------ChhHHHHHHhhcCccEEEEcchhHHHHhccccccc---cCccEEEEecCCcHHHHHHhhhCCCceeeH
Q 007257 81 PLYDTL------GPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA---QRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 151 (611)
Q Consensus 81 ~l~~~~------~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 151 (611)
|+.|.- .-..+..+++..++.+|+++......+.+...... .-+..+++.++... +|
T Consensus 856 pv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~--------------t~ 921 (1363)
T KOG3628|consen 856 PVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE--------------TI 921 (1363)
T ss_pred ccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch--------------hh
Confidence 998764 23367889999999999999886665544322111 12223333333321 11
Q ss_pred HHHHhcccc--cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhH
Q 007257 152 DEFLHLGKV--NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI 229 (611)
Q Consensus 152 ~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 229 (611)
..-...... ...++.-..++.+|++-+.--++|.--++.++|.++++.+......+. ...+...+.+..|.+.+
T Consensus 922 ~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~----l~~~rpl~~~~~~~sGl 997 (1363)
T KOG3628|consen 922 RKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQ----LYKSRPLLGCSSPYSGL 997 (1363)
T ss_pred hhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHc----cccCCceEEEecCccch
Confidence 111111111 122223346788999999999999999999999999999999888872 33445555555566665
Q ss_pred HHHHHHHHHhhcCceEEEecC-----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 007257 230 LDRVIEEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 304 (611)
Q Consensus 230 ~g~~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (611)
..+.+++...+.|...+++++ ++..|+..|++|++.-++.+-..+..+.+.+...-+.++..
T Consensus 998 gf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~------------- 1064 (1363)
T KOG3628|consen 998 GFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKR------------- 1064 (1363)
T ss_pred hHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhh-------------
Confidence 556679999999999988876 89999999999999999999988888876544332222210
Q ss_pred HHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc---CC---ceeeccccCCCCCceeec
Q 007257 305 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC---CA---FLVQGYGLTETCGPTTVC 378 (611)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~---~~---~v~~~yG~tE~g~~~~~~ 378 (611)
.. ..++ ..++..-+.......+-|.+.+ |. .+-..|++.=--.++...
T Consensus 1065 -----------------gn--------n~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~ 1118 (1363)
T KOG3628|consen 1065 -----------------GN--------NTSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRS 1118 (1363)
T ss_pred -----------------hc--------cccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhcc
Confidence 00 0012 3344444444455555555444 21 122233322111111110
Q ss_pred c---------CC-----------------CccccCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCC
Q 007257 379 F---------PD-----------------EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYK 432 (611)
Q Consensus 379 ~---------~~-----------------~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 432 (611)
. .+ ..-.....|...+++++.|++ ++.. .++..|+.||||+.|.+-+.+|++
T Consensus 1119 ~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~Ivn-PEtk-~pc~dge~GEIW~~S~hnA~~~~~ 1196 (1363)
T KOG3628|consen 1119 YSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVN-PETK-GPCRDGELGEIWVNSAHNASCSFT 1196 (1363)
T ss_pred ccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeC-Cccc-cccccCCcceEEeccccccccccc
Confidence 0 00 001113458888999999999 5554 677889999999999988888774
Q ss_pred ChH-hhhhhc----------cCCccccCceEEEcc------CC----eEEEEeccCCeEEcCCceecCcHHHHHHH-hcC
Q 007257 433 NPD-LTRESI----------IDGWFHTGDIGQILP------NG----VVKIIDRKKNLIKISQGEYVALEYLENVY-CVA 490 (611)
Q Consensus 433 ~~~-~~~~~~----------~~g~~~TGD~~~~~~------dG----~l~~~GR~~d~i~~~~G~~v~~~~iE~~l-~~~ 490 (611)
-.+ .....| ..+|.||||+|+... +| -+|++|-.++.+.+ +|.+.+|.+||..+ +.|
T Consensus 1197 ~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl-~GL~h~p~DIE~TV~~vH 1275 (1363)
T KOG3628|consen 1197 IGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLEL-NGLRHFPSDIETTVERVH 1275 (1363)
T ss_pred cCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeee-cCcccCcchHHHHHHHhc
Confidence 321 222222 124999999999842 22 48999999999998 99999999999999 679
Q ss_pred cCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEE-e
Q 007257 491 PIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVIL-D 569 (611)
Q Consensus 491 p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~-~ 569 (611)
|.|.+|+|+.. ...++.+++...+. ++ .+|.....+..|..|.++..++. |
T Consensus 1276 ~~I~~cavF~~--~glvVvviE~~gq~---------------------~~-----~~LvPlIv~~vL~eH~iI~dvV~fV 1327 (1363)
T KOG3628|consen 1276 PSIGGCAVFQA--TGLVVVVIECHGQQ---------------------EL-----ADLVPLIVNVVLEEHYIILDVVAFV 1327 (1363)
T ss_pred ccccceeeEee--CCeEEEEEEecCch---------------------hH-----hhhhHHHHHHHHhhcceEEEEEEEe
Confidence 99999999984 45677777666532 01 11112222333555665655444 4
Q ss_pred cCCCCCCCCccccccccchHHHHHHH-HHHHHHHH
Q 007257 570 PRPFDMERDLVTATLKKKRNKLLIYY-QVEIDQLY 603 (611)
Q Consensus 570 ~~~~~~~~~P~t~~GKv~R~~l~~~~-~~~~~~~y 603 (611)
+ + +.+|+++.|..+|..+++.| .+.|+-.|
T Consensus 1328 ~-~---G~~p~~~~gEK~R~~I~~~w~~~kL~~~~ 1358 (1363)
T KOG3628|consen 1328 D-K---GVFPRNSRGEKQRAHILDSWLAGKLDPIY 1358 (1363)
T ss_pred c-C---CccccCCchhhHHHHHHHHHHhcccceee
Confidence 4 3 88999999999999999976 55666555
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=2e-29 Score=273.98 Aligned_cols=496 Identities=19% Similarity=0.113 Sum_probs=316.7
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEee
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.+.+.|++.+..+.+. ....+....+||.+....++.+++.|...|..+|+.|++++..+.++++..++++++|..+++
T Consensus 45 ~~~~~~~~~~~~~~p~-~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~ 123 (1032)
T KOG1178|consen 45 ELAEAPENTGHVIIPT-ASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLP 123 (1032)
T ss_pred HHhhcccCCCceEeec-ccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEE
Confidence 3566788888777643 345666789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHhhcCcc-----EEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEID-----FVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLH 156 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~-----~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (611)
++|.++.-++...+.+.-.. .-+........+ ........ .......+.+.
T Consensus 124 idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~---~~~~~~~~---------------------~sv~~~~~~f~ 179 (1032)
T KOG1178|consen 124 IDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDI---LLNSLFPK---------------------LSVETIADSFQ 179 (1032)
T ss_pred ecCCCcccccchHHHhhhhhheeccceehhhhhhHHH---Hhhccccc---------------------cchhhccchhh
Confidence 99999921111111111100 111111100000 00000000 00000011111
Q ss_pred cccc--cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH
Q 007257 157 LGKV--NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI 234 (611)
Q Consensus 157 ~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~ 234 (611)
.... .........+|..+++.||||+||.||+|..+|..+.+...+....+ .+...+++-.....+..-....
T Consensus 180 ~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-----~~t~s~~~~~~~~~~~~d~i~~ 254 (1032)
T KOG1178|consen 180 MVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-----PPTGSDRFTFKTSVYFDDTIQK 254 (1032)
T ss_pred hhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-----CcCccchhhhhheeecccchHH
Confidence 1111 11222345677899999999999999999999999999988877665 6666666522222222222222
Q ss_pred HHHH-hhcCceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhh
Q 007257 235 EEYF-FRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 309 (611)
Q Consensus 235 ~~~~-l~~G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (611)
...+ +..|+.+..+.. ++..+.+.++++.++..+.+|++.+.++.........+. ....+
T Consensus 255 ~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~-------------~~~~~-- 319 (1032)
T KOG1178|consen 255 FIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLE-------------HAFSL-- 319 (1032)
T ss_pred HHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhh-------------hhhhc--
Confidence 3333 555555555433 589999999999999999999999988764332110000 00000
Q ss_pred cCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceeeccccCCCCCceeeccCCCc-----
Q 007257 310 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEM----- 383 (611)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~~yG~tE~g~~~~~~~~~~~----- 383 (611)
.+. ....+.|+....+|++...++...+...+ -.-...-|++++..+..........
T Consensus 320 ----------~dl-------~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~ 382 (1032)
T KOG1178|consen 320 ----------SDL-------LTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLT 382 (1032)
T ss_pred ----------ccc-------cccchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceec
Confidence 000 00114899999999999999888665544 1222233888888776665432210
Q ss_pred -cc-------cCccCCCccCeeEEEeecCCCC--CCCCCCCCCcEEEEecCCcccccCCChHhhhhhc------cCCccc
Q 007257 384 -CM-------VGTAGPVSVYSELRLEEVPEMG--YSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI------IDGWFH 447 (611)
Q Consensus 384 -~~-------~~~~G~~~~~~~v~i~~~~~~~--~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~------~~g~~~ 447 (611)
.. ..-+|... .+.... ..+. ...++.+..|.-...+.++..| ++.++.....+ .+.+|+
T Consensus 383 ~~~v~~~p~~~~~~~~~~---~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~ 457 (1032)
T KOG1178|consen 383 NENVYSVPKFDSIIGSLT---VLESLY-RAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYR 457 (1032)
T ss_pred ceeEEeccchhhccCCCc---ceeeee-ccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhccc
Confidence 00 00111111 111111 1111 0111112223333334444455 23333332222 245899
Q ss_pred cCceEEEccCCeEEEEeccCCeEEcCCceecCcHHHHHHHhcCcCcceEEEEecCCCC---eEEEEEecChHHHHHHHHH
Q 007257 448 TGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDIWVYGDSLKS---MLVAVVVPCEEDTKKWAYS 524 (611)
Q Consensus 448 TGD~~~~~~dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~V~~~~v~~~~~~~---~~~a~vv~~~~~~~~~~~~ 524 (611)
|||+|+...+|.+.+.||.|++||+ +|.++.+.+|+..+..||.|.+++++...++. .+.||++......
T Consensus 458 tgD~gr~l~ng~l~~~GR~d~qIK~-rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~------ 530 (1032)
T KOG1178|consen 458 TGDNGRSLKNGGLEISGRADRQIKD-RGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSK------ 530 (1032)
T ss_pred ccccceeecCCCEEEEEeccceEEE-ccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCC------
Confidence 9999999899999999999999997 99999999999999999999999999866553 7999999887531
Q ss_pred CCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHH
Q 007257 525 NGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYY 595 (611)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~ 595 (611)
..+ +.+|+.++. +.|+.|++|..++.++.. |+|++||||+++|.+.+
T Consensus 531 -------------~~~----~~~i~~~l~-~~La~y~vPs~~V~l~~v------Pl~~~GKvDkkaL~~~~ 577 (1032)
T KOG1178|consen 531 -------------SVL----IRDIRNYLK-KELASYMLPSLVVPLAKV------PLNPNGKVDKKALLEYN 577 (1032)
T ss_pred -------------chh----HHHHHHhhc-ccccceecceEEEEhhhC------CcCCCCCcChhhhhhhh
Confidence 111 566777775 889999999988887655 99999999999999833
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.6e-27 Score=248.52 Aligned_cols=260 Identities=17% Similarity=0.120 Sum_probs=186.1
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHhhcCceEEE
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGY 247 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~ 247 (611)
+.++++.+++||||||.||+|.+||.++..........+. ..++..+|+++...|+.+..+... .+.+...|++++.
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~--~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFV--SQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHH--HcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 4567899999999999999999999998776654433221 126788899999988877655544 3445777887654
Q ss_pred ecCChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHH
Q 007257 248 YHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRK 327 (611)
Q Consensus 248 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (611)
.. .....++.|+++++|++.++|+.+..+++.+.......
T Consensus 162 ~~-~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~--------------------------------------- 201 (445)
T TIGR03335 162 EG-KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDP--------------------------------------- 201 (445)
T ss_pred CC-chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCc---------------------------------------
Confidence 33 44567899999999999999998887765433211000
Q ss_pred HHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEEEeecCCCC
Q 007257 328 VKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMG 407 (611)
Q Consensus 328 ~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~ 407 (611)
...++|.+++||+++++++.+.+.+.||+++++.||+||++. +..+... .....+.+...++|+| +++
T Consensus 202 ----~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~-~~~c~~~-----~g~h~~~d~~~vEIvD-p~~- 269 (445)
T TIGR03335 202 ----AESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTM-CGECQAV-----AGLHVPEDLVHLDVYD-PRH- 269 (445)
T ss_pred ----ccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhh-eEEecCC-----CCccccCCceEEEEEc-CCC-
Confidence 013899999999999999999999999999999999999863 3333211 1122233456788887 443
Q ss_pred CCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEc--cC---C----eEEEEeccCCeEEcCCceec
Q 007257 408 YSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQIL--PN---G----VVKIIDRKKNLIKISQGEYV 478 (611)
Q Consensus 408 ~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~--~d---G----~l~~~GR~~d~i~~~~G~~v 478 (611)
..++++|+.|||++++-.... ++..++=--|+|||++++. +. | ++...||.|||+++ +|.+|
T Consensus 270 ~~~vp~Ge~GELvvT~L~~~~--------~r~~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~-~g~~~ 340 (445)
T TIGR03335 270 QRFLPDGECGRIVLTTLLKPG--------ERCGSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWI-SGVPF 340 (445)
T ss_pred CCCCcCCCceEEEEEecCCCC--------ccCCceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEE-CCEEe
Confidence 466788999999999843210 0000111129999999973 22 3 24456999999999 99999
Q ss_pred CcHHHHHHHhcCc
Q 007257 479 ALEYLENVYCVAP 491 (611)
Q Consensus 479 ~~~~iE~~l~~~p 491 (611)
+|.+||++|.+++
T Consensus 341 ~p~~ie~~l~~~~ 353 (445)
T TIGR03335 341 NRVDVERAVFQRE 353 (445)
T ss_pred CHHHHHHHHhccC
Confidence 9999999999953
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.93 E-value=5.9e-24 Score=211.31 Aligned_cols=284 Identities=22% Similarity=0.202 Sum_probs=212.0
Q ss_pred CCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchh-hHHHHHHHHHHhhcCceEE
Q 007257 168 PQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA-HILDRVIEEYFFRRGASVG 246 (611)
Q Consensus 168 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~-~~~g~~~~~~~l~~G~~~~ 246 (611)
.+-++...+--||||||+|+.+.+++..+......+.+.+. ..+...+|++....-.. +..|+...+.+-..|++++
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~--~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vi 164 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLY--SAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVI 164 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHH--HccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEE
Confidence 34456677889999999999999999998888777766553 23677888876665532 2222334455556788777
Q ss_pred EecC-ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhh
Q 007257 247 YYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAF 325 (611)
Q Consensus 247 ~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (611)
-... +....+.+++.+++|++.++|+.+..|++.+.+.+. .+.+
T Consensus 165 p~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~--~~~~--------------------------------- 209 (438)
T COG1541 165 PISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGI--DPDK--------------------------------- 209 (438)
T ss_pred ccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCC--Chhh---------------------------------
Confidence 6665 889999999999999999999999999887766531 1000
Q ss_pred HHHHHHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCce-eeccCCCccccCccCCCccCeeEEEeecC
Q 007257 326 RKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPT-TVCFPDEMCMVGTAGPVSVYSELRLEEVP 404 (611)
Q Consensus 326 ~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~-~~~~~~~~~~~~~~G~~~~~~~v~i~~~~ 404 (611)
.+||.+++|+|++++++.+.+.+.||+.+++.||+||..+.. ..|.... ....+-+..-+.++| +
T Consensus 210 --------~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~~~-----glhi~eD~~~~Ei~d-P 275 (438)
T COG1541 210 --------LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTERN-----GLHIWEDHFIFEIVD-P 275 (438)
T ss_pred --------cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCccccccccc-----CCCcchhhceeeeec-C
Confidence 389999999999999999999999999999999999998874 3333321 122334556667776 3
Q ss_pred CCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccC----Ce-----EEEEeccCCeEEcCCc
Q 007257 405 EMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN----GV-----VKIIDRKKNLIKISQG 475 (611)
Q Consensus 405 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~d----G~-----l~~~GR~~d~i~~~~G 475 (611)
.+...+++|+.|||+++.-. +..++=--|+|||+..+.++ |+ -.+.||.||++++ .|
T Consensus 276 -~t~e~l~dge~GelV~T~L~------------~~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~-~G 341 (438)
T COG1541 276 -ETGEQLPDGERGELVITTLT------------KEGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIV-RG 341 (438)
T ss_pred -CcCccCCCCCeeEEEEEecc------------ccCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEE-CC
Confidence 44478888999999998732 11111123999999999774 33 4689999999998 79
Q ss_pred eecCcHHHHHHHhcCcCcc---eEEEEecCCCCeEEEEEecChH
Q 007257 476 EYVALEYLENVYCVAPIIE---DIWVYGDSLKSMLVAVVVPCEE 516 (611)
Q Consensus 476 ~~v~~~~iE~~l~~~p~V~---~~~v~~~~~~~~~~a~vv~~~~ 516 (611)
.+|+|.+||+.|.+++.+. ++++........+.+.|+..++
T Consensus 342 ~~vfp~~ie~~l~~~~~~~~~yqi~~~~~~~~d~L~V~vE~~~~ 385 (438)
T COG1541 342 VNVFPSQIERVLLQIPEVTPHYQIILTRNGGLDELTVRVELENE 385 (438)
T ss_pred EEeCHHHHHHHHhcccCCCceEEEEEecCCCCceEEEEEEecCc
Confidence 9999999999999999999 4444442233578888888753
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=1.4e-24 Score=205.67 Aligned_cols=220 Identities=15% Similarity=0.033 Sum_probs=159.8
Q ss_pred ccccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 2 SVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 2 ~a~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
.++++|+++|+++. ++.+++.+++||+||.++++++|..|.+ .|+++||+|+++++|+++++++++||+++|++++
T Consensus 5 ~~~~~p~~~al~~~---~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 5 LLAADPASPRLTFY---DDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhCCCCcEEEEE---cCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56789999999865 3322233689999999999999999998 6999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhcccc
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 160 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (611)
|++ .+++++++++++...... .+ +.++.+.+....... .........+|.+.......
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~------~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 139 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA------GS--GEVVALSLDPLGRRV-AGELPPGVIDFAPEVRVHGD 139 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc------cC--CceEEEeccccccCC-CCCCCCcccchhhhhhccCC
Confidence 995 678999999887666532 11 122222110000000 00001122355555443212
Q ss_pred cCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHH-HHHHh
Q 007257 161 NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFF 239 (611)
Q Consensus 161 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l 239 (611)
.........++|+++++||||+ +|.++.... ..+ ++..+|+++ ..|++|.+|+.. ++.++
T Consensus 140 ~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-----~l~~~D~~l-~~Pl~H~~gl~~~~~~~l 200 (227)
T TIGR03089 140 QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-----GLPPGDRVL-VLAWTDLEDFLATLLAPL 200 (227)
T ss_pred CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-----CCCCCCeEE-ecCCCchHHHHHHHHHHh
Confidence 1111113467899999999986 555555443 223 688899999 999999999975 66789
Q ss_pred hcCceEEEecC-ChHHHHHHHhhhcCe
Q 007257 240 RRGASVGYYHG-DLNALRDDLMELKPT 265 (611)
Q Consensus 240 ~~G~~~~~~~~-~~~~~~~~i~~~~~t 265 (611)
..|+++++.+. ++..+++.|+++|+|
T Consensus 201 ~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 201 AAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred ccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 99999999876 999999999999987
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.82 E-value=3.8e-18 Score=180.72 Aligned_cols=493 Identities=15% Similarity=0.133 Sum_probs=321.1
Q ss_pred ccCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEe
Q 007257 4 QKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVS-ALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICV 80 (611)
Q Consensus 4 ~~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~-~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~ 80 (611)
.+++..+|.++. | +.|+...+||..+..++.++|+ .|-+.|+.++|+|.++...+ .++++..++|..+|.+.+
T Consensus 105 nhs~~~ta~i~i---d-~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~v 180 (1363)
T KOG3628|consen 105 NHSATSTAHICI---D-KKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAV 180 (1363)
T ss_pred cCCCCCceEEEE---c-CCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeec
Confidence 356788899998 5 4555899999999999999999 66677999999999988776 799999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecCCcHHHHHHhhhCCCceeeHHHHHhccc-
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGK- 159 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (611)
|+++..+.+++...++.....++++............. ..+|...+..-.
T Consensus 181 p~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~-----------------------------~~s~~k~v~~w~t 231 (1363)
T KOG3628|consen 181 PLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNS-----------------------------PVSLAKAVAWWKT 231 (1363)
T ss_pred cchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccC-----------------------------cccHHHHHHhhhc
Confidence 99999999999999999999999987765444322110 001111111100
Q ss_pred --------ccCCcCCCCCCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccc---c------------ccCCCCC
Q 007257 160 --------VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLD---Q------------FEDKMTV 216 (611)
Q Consensus 160 --------~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~---~------------~~~~~~~ 216 (611)
......++..-. ..+|-||++++|.--|++++|. +......+..... . .-.....
T Consensus 232 ~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~ 309 (1363)
T KOG3628|consen 232 NDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPS 309 (1363)
T ss_pred ccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCc
Confidence 011111122222 7999999999999999999998 5554444322210 0 0113345
Q ss_pred CcEEEEecchhhHHHHHH-HHHHhhcCceEEEecC----ChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchH
Q 007257 217 DDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPL 291 (611)
Q Consensus 217 ~~~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~ 291 (611)
.+.++.........|++. .+.+++.|.+.+.++. .|..+...+.+++.+++..-...+......+.+
T Consensus 310 ~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~-------- 381 (1363)
T KOG3628|consen 310 EDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQE-------- 381 (1363)
T ss_pred ccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccC--------
Confidence 666666666666677765 7778999999988876 788999999999999998876666554332211
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHHHHHHHc----C--------
Q 007257 292 RRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC----C-------- 359 (611)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~----~-------- 359 (611)
.| ...+.+.+-++..++++|.+++.-..+..+...-..+.+ |
T Consensus 382 -------------------------~p-~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~ 435 (1363)
T KOG3628|consen 382 -------------------------DP-KATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVD 435 (1363)
T ss_pred -------------------------Cc-ccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceee
Confidence 01 111223444445678999999999999888655544442 2
Q ss_pred ----------CceeeccccCCCCCceeeccCCCc-----------------------------cccCccCCCccC-eeEE
Q 007257 360 ----------AFLVQGYGLTETCGPTTVCFPDEM-----------------------------CMVGTAGPVSVY-SELR 399 (611)
Q Consensus 360 ----------~~v~~~yG~tE~g~~~~~~~~~~~-----------------------------~~~~~~G~~~~~-~~v~ 399 (611)
.-....-+++|.+......+.... .....+|...|+ +.+.
T Consensus 436 ~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~ 515 (1363)
T KOG3628|consen 436 FPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLA 515 (1363)
T ss_pred chhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEE
Confidence 112222334555544433322100 011244555555 2333
Q ss_pred EeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhcc-------------CCccccCceEEEccCCeEEEEecc
Q 007257 400 LEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII-------------DGWFHTGDIGQILPNGVVKIIDRK 466 (611)
Q Consensus 400 i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------~g~~~TGD~~~~~~dG~l~~~GR~ 466 (611)
++ +++....+..++.|||||.+++...+|+.-+..+...|. ..|.|||-+|++. +|.++++|-.
T Consensus 516 vv--~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k 592 (1363)
T KOG3628|consen 516 VV--NPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLK 592 (1363)
T ss_pred Ee--CCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEec
Confidence 33 466667777889999999999999999988888777762 1289999999996 6667776666
Q ss_pred CCeEEcCCceecCc----------HHHHHHHhcCcCcceEEEEecCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhc
Q 007257 467 KNLIKISQGEYVAL----------EYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCS 536 (611)
Q Consensus 467 ~d~i~~~~G~~v~~----------~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~ 536 (611)
+|++.--.|..... +.|+.+.+..+.|-++.+|- .+++..+++-++...+ + +
T Consensus 593 ~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~---~E~~~Vv~~esP~a~e---------~------~ 654 (1363)
T KOG3628|consen 593 EDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE---DEHIVVVVLESPDATE---------E------N 654 (1363)
T ss_pred hhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee---cceEEEEEEeCcchhh---------h------h
Confidence 66554323443332 34566677888899999988 3344444433332211 0 1
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHHHHHH
Q 007257 537 LVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLIYYQV 597 (611)
Q Consensus 537 ~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~~~~~ 597 (611)
.-+....+.+.+..+. ++.-| .+.+++ ...+|||+.|-+.-...+++|.+
T Consensus 655 ~~q~~~~v~q~l~~iH---qv~vy----CilivP----~~tLPrt~~~Gi~~~~~k~~F~~ 704 (1363)
T KOG3628|consen 655 SFQWMSRVFQALDSIH---QVGVY----CILIVP----ANTLPRTPLGGIHNNECKQAFLE 704 (1363)
T ss_pred hhhHHHHHHHHHHHHh---cccce----EEEEec----cccCCCccccccccHHHHHHHHc
Confidence 1112223444444443 23333 344453 36789999988999999998855
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.78 E-value=1.9e-16 Score=162.43 Aligned_cols=259 Identities=17% Similarity=0.163 Sum_probs=166.7
Q ss_pred eEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecc-hhhHHHHHHHHHHhhcCceEEEec--
Q 007257 173 ICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLP-LAHILDRVIEEYFFRRGASVGYYH-- 249 (611)
Q Consensus 173 ~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p-~~~~~g~~~~~~~l~~G~~~~~~~-- 249 (611)
-..+..||||||.|-.+..+..............+. ..++..++++..... -.+.+.. +. .....+.+++
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~--~~g~~~g~r~a~~~~~~~~ly~~---~~--~~~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVL--PDGLFAKHRIAFFLRADNNLYQS---VN--NRWISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhC--ccccccCCcEEEEEccChhHHHH---HH--hccceeeecCCC
Confidence 356778999999999999998876544433322221 113444444444321 1122211 10 0111122232
Q ss_pred CChHHHHHHHhhhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHH
Q 007257 250 GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVK 329 (611)
Q Consensus 250 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (611)
.+.+.+++.|++++||++.++|+.+..|++.+.+... .
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l--~---------------------------------------- 211 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL--T---------------------------------------- 211 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC--C----------------------------------------
Confidence 2788999999999999999999999999875543210 0
Q ss_pred HHcCCceeEEEEecCCCCHHHHHHHHHHcCCceeeccccCCCCCceeeccCCCccccCccCCCccCeeEE--EeecCCCC
Q 007257 330 ARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR--LEEVPEMG 407 (611)
Q Consensus 330 ~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~--i~~~~~~~ 407 (611)
.+++.++++||.++++..+.+.+.||++|++.||+|| |.++..|..+..+. -...+-++ ++| +++
T Consensus 212 ----~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~eC~~g~lHl------~ed~~~vE~~ivD-~~~- 278 (430)
T TIGR02304 212 ----IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLASTCRCGTLHL------NEDLVHIEKQYLD-EHK- 278 (430)
T ss_pred ----CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEEecCCCCEEE------ccccEEEEeeEEC-CCC-
Confidence 2689999999999999999999999999999999999 66665554332111 11222233 555 322
Q ss_pred CCCCCCCCCcEEEEecCC-cccccCCChHhhhhhccCCccccCceEEEccC----Ce----E-EEEeccCCeEEc--CCc
Q 007257 408 YSPLDDPPCGEVCVRGKT-LFSGYYKNPDLTRESIIDGWFHTGDIGQILPN----GV----V-KIIDRKKNLIKI--SQG 475 (611)
Q Consensus 408 ~~~~~~~~~Gel~v~~~~-~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~d----G~----l-~~~GR~~d~i~~--~~G 475 (611)
.+..+|++-. -.... --|+|||++.+.++ |. + .+.||.+|++++ .+|
T Consensus 279 --------~~~~ViT~L~n~~~Pl-------------IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G 337 (430)
T TIGR02304 279 --------RFVPIITDFTRTTQPI-------------VRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSG 337 (430)
T ss_pred --------ceEEEEecCCCccceE-------------EeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCC
Confidence 1444555521 11111 13999999988544 32 3 378999999984 355
Q ss_pred ee--cCcHHHHHHH-hcCcCcceEEEEecCCCCeEEEEEecCh
Q 007257 476 EY--VALEYLENVY-CVAPIIEDIWVYGDSLKSMLVAVVVPCE 515 (611)
Q Consensus 476 ~~--v~~~~iE~~l-~~~p~V~~~~v~~~~~~~~~~a~vv~~~ 515 (611)
.. ++|..+++.| ...++|.+..++... .+.+...+++..
T Consensus 338 ~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~-~~~l~v~~~~~~ 379 (430)
T TIGR02304 338 DEQTVFPDFIRRVILFTLPLIVEYRVLQTG-SAQLELIADCEL 379 (430)
T ss_pred CeEEeCHHHHHHHHHhcCCCCceEEEEEcc-CCeEEEEEEeCh
Confidence 44 5889999885 568999999988865 556666666553
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=1.1e-18 Score=174.56 Aligned_cols=115 Identities=15% Similarity=0.049 Sum_probs=96.6
Q ss_pred ccCCccccCceEEE-ccCCeEEEEeccCCeEEcCCc---eecCcHHHHHHHhcCcCcceEEEEecCCC---CeEEEEEec
Q 007257 441 IIDGWFHTGDIGQI-LPNGVVKIIDRKKNLIKISQG---EYVALEYLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVP 513 (611)
Q Consensus 441 ~~~g~~~TGD~~~~-~~dG~l~~~GR~~d~i~~~~G---~~v~~~~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~ 513 (611)
+.+|||+|||+|++ |+||+|++.||.+ +| ++|+|. ||++|.+||+|.||+|++.+++ +.++|+|++
T Consensus 206 ~~dgW~~TGDlg~~~d~dG~l~~~gR~~------~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~ 278 (365)
T PRK09188 206 PSRIWLATGKKVYNFITRGLFSWSDGEG------TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEA 278 (365)
T ss_pred ccCcEEeCCCEEEEEcCCCeEEEEecCc------CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEE
Confidence 46899999999998 7999999999997 56 799999 9999999999999999998766 479999987
Q ss_pred ChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCCCcceeeeEEEecCCCCCCCCccccccccchHHHHH
Q 007257 514 CEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKRNKLLI 593 (611)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R~~l~~ 593 (611)
..+. +. ++|.++++ ++|+. ++|+.+.++++. |+|++||++|++|+.
T Consensus 279 ~~~~------------------~~--------~el~~~l~-~~L~~-kvP~~v~~v~~l------P~t~~GKi~R~~Lr~ 324 (365)
T PRK09188 279 ELPA------------------DE--------KSLRARLA-GAKPP-KPPEHIQPVAAL------PRDADGTVRDDILRL 324 (365)
T ss_pred CCCC------------------CH--------HHHHHHHH-hhchh-cCCcEEEEECCC------CCCCCCCccHHHHHH
Confidence 6321 11 23445554 77999 999999999765 999999999999988
Q ss_pred HHH
Q 007257 594 YYQ 596 (611)
Q Consensus 594 ~~~ 596 (611)
...
T Consensus 325 ~~~ 327 (365)
T PRK09188 325 IAM 327 (365)
T ss_pred Hhh
Confidence 753
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.93 E-value=1.1e-07 Score=95.97 Aligned_cols=235 Identities=18% Similarity=0.229 Sum_probs=138.4
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhh---HHHHH--HHHHHhhcCc
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAH---ILDRV--IEEYFFRRGA 243 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~---~~g~~--~~~~~l~~G~ 243 (611)
.++++..++.||||||.|--+.+.+..+......+...+............++...|-.. ..+.. ..+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 456678899999999998767777666665554444333211111112233444444321 11111 1222334455
Q ss_pred eEEEecC---ChHHHHHHHh----hhcCeEEecchHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 007257 244 SVGYYHG---DLNALRDDLM----ELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREA 316 (611)
Q Consensus 244 ~~~~~~~---~~~~~~~~i~----~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (611)
. .+... +...++..++ +.++..+++.|.++-.++..+++....+.
T Consensus 167 ~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~--------------------------- 218 (365)
T PF04443_consen 167 R-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFR--------------------------- 218 (365)
T ss_pred e-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCccc---------------------------
Confidence 5 44433 5666665554 56799999999877766655444322111
Q ss_pred chHHHHHhhHHHHHHcCCceeEEEEec------CCCCH-HHHHHHHHHcCC----ceeeccccCCCCCceeeccCCCccc
Q 007257 317 SPLADLLAFRKVKARLGGRLRLVISGG------APLST-EVEEFLRVTCCA----FLVQGYGLTETCGPTTVCFPDEMCM 385 (611)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~i~~~G------~~l~~-~~~~~~~~~~~~----~v~~~yG~tE~g~~~~~~~~~~~~~ 385 (611)
+ .+..+.+-.|| +.+++ +..+.+.+.||+ .+++.||+||.......+.....
T Consensus 219 --------L-------~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~~-- 281 (365)
T PF04443_consen 219 --------L-------PKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGHF-- 281 (365)
T ss_pred --------C-------CCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCCcc--
Confidence 0 01233444443 45765 466667787887 69999999998877666533221
Q ss_pred cCccCCCccCeeEEEeecCCCCCCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccC--------
Q 007257 386 VGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN-------- 457 (611)
Q Consensus 386 ~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~d-------- 457 (611)
...+. +.+.| ++ +..+++.|+.|=|.+-.+... .| -+..-|.|+|.+..+
T Consensus 282 -----~~p~w--V~iRD-p~-tl~~~~~Ge~Gli~vidl~~~-s~------------p~~IlTeDlGvl~~~~~c~cr~g 339 (365)
T PF04443_consen 282 -----HVPPW--VIIRD-PE-TLEPLPPGETGLIQVIDLANT-SY------------PGFILTEDLGVLHGDDDCGCRKG 339 (365)
T ss_pred -----cCCCe--EEEEC-CC-CCcCCCCCCeeEEEEEccccc-CC------------CcEEEEcceeeecCCCCCCCccC
Confidence 11233 66666 43 568889999999988775432 12 234679999988654
Q ss_pred CeEEEEeccCCeE
Q 007257 458 GVVKIIDRKKNLI 470 (611)
Q Consensus 458 G~l~~~GR~~d~i 470 (611)
.++.++||.+.-=
T Consensus 340 ~~f~vlGR~~~ae 352 (365)
T PF04443_consen 340 KYFEVLGRADGAE 352 (365)
T ss_pred CEEEEEeCCCCCc
Confidence 2799999987543
No 133
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.74 E-value=1.5e-08 Score=77.19 Aligned_cols=68 Identities=24% Similarity=0.192 Sum_probs=50.6
Q ss_pred HHHHHHhcCcCcceEEEEecCCC---CeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHHHHhCCCC
Q 007257 482 YLENVYCVAPIIEDIWVYGDSLK---SMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNAAERNKLR 558 (611)
Q Consensus 482 ~iE~~l~~~p~V~~~~v~~~~~~---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 558 (611)
|||++|.+||+|.||+|++.++. +.++|++++ .. ++|+++++ .+||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-~~-----------------------------~~i~~~~~-~~l~ 49 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-DE-----------------------------EEIRDHLR-DKLP 49 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-HH-----------------------------HHHHHHHH-HHS-
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe-ee-----------------------------cccccchh-hhCC
Confidence 79999999999999999998765 489999998 21 34555554 5699
Q ss_pred Ccceeee--EEEecCCCCCCCCccccccc
Q 007257 559 GFEHIKG--VILDPRPFDMERDLVTATLK 585 (611)
Q Consensus 559 ~~~~p~~--i~~~~~~~~~~~~P~t~~GK 585 (611)
+|++|+. ++.+++. +|+|++||
T Consensus 50 ~~~~P~~~~~v~~~~~-----lP~t~~GK 73 (73)
T PF13193_consen 50 PYMVPRRIRFVRLDEE-----LPRTPSGK 73 (73)
T ss_dssp GGGS-SEEEEEEESSS-----EEBETTSS
T ss_pred CcceeeEEEEccccCc-----CCCCCCCC
Confidence 9999944 4444442 59999998
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.56 E-value=1.3e-06 Score=93.31 Aligned_cols=161 Identities=20% Similarity=0.180 Sum_probs=93.1
Q ss_pred CCceeEEEEecCCCCHHHHHHHHHHcC-Cc-eeeccccCCCCCceeeccCCCccccCccCCCccCe-eEEEeecCCCC--
Q 007257 333 GGRLRLVISGGAPLSTEVEEFLRVTCC-AF-LVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYS-ELRLEEVPEMG-- 407 (611)
Q Consensus 333 ~~~l~~i~~~G~~l~~~~~~~~~~~~~-~~-v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~-~v~i~~~~~~~-- 407 (611)
-|+|+.|.+.++.-...-.+.+++.+| ++ +...|++||+- +..+.... ...+.+.++. =.+.++.++..
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~--i~i~~~~~----~~~~~l~~~~~ffEFip~~~~~~~ 339 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF--IGIPLDPE----DPGYVLAPDSGFFEFIPVDEDEQN 339 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE--EEEES-CC----C--EEE-TTSSEEEEEE-STT---
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceE--EEEecCCC----CCceEeecCCeEEEEEeccCCccc
Confidence 379998887776666677777777775 33 45689999953 33332211 1111222221 33444433221
Q ss_pred ----C-----CCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEcc--CC--eEEEEeccCCeEEcCC
Q 007257 408 ----Y-----SPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILP--NG--VVKIIDRKKNLIKISQ 474 (611)
Q Consensus 408 ----~-----~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~--dG--~l~~~GR~~d~i~~~~ 474 (611)
. ..+..|+.-||+|+.. .|.|. |+.||+.++.. ++ .+.++||.+.++.+ .
T Consensus 340 ~~~~~~~l~~~ele~G~~YelviTt~---~GLyR-------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l-~ 402 (528)
T PF03321_consen 340 PSEQPKTLLLHELEVGEEYELVITTN---SGLYR-------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL-F 402 (528)
T ss_dssp ----SSSEEGGG--TT-EEEEEEEST---TS-SS-------------EEECEEEEEEEEETTEEEEEEEEETTEEE-S-S
T ss_pred ccCCCceecHHHhcCCCeEEEEEecc---cceee-------------eecCCEEEEeeccCCCcEEEEeccCCceeec-c
Confidence 1 1223566778888874 24443 89999999853 34 69999999999998 8
Q ss_pred ceecCcHHHHHHHhcC-----cCcceEEEEec---CCCCeEEEEEecChH
Q 007257 475 GEYVALEYLENVYCVA-----PIIEDIWVYGD---SLKSMLVAVVVPCEE 516 (611)
Q Consensus 475 G~~v~~~~iE~~l~~~-----p~V~~~~v~~~---~~~~~~~a~vv~~~~ 516 (611)
|++++-.+|++++.+. -.+.+..+... ..+.+.+.++++...
T Consensus 403 gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 403 GEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp S--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred eeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 9999999999999654 33667777665 234577777777754
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.07 E-value=0.00032 Score=75.42 Aligned_cols=136 Identities=14% Similarity=0.130 Sum_probs=79.1
Q ss_pred HcCCc---eeEEEEecCCCCHHHHHHHHHHc-CC-ceeeccccCCCCCceeeccCCCccccCccCCC--ccCeeEEEeec
Q 007257 331 RLGGR---LRLVISGGAPLSTEVEEFLRVTC-CA-FLVQGYGLTETCGPTTVCFPDEMCMVGTAGPV--SVYSELRLEEV 403 (611)
Q Consensus 331 ~~~~~---l~~i~~~G~~l~~~~~~~~~~~~-~~-~v~~~yG~tE~g~~~~~~~~~~~~~~~~~G~~--~~~~~v~i~~~ 403 (611)
.+-|. +..++.||.. .-...++..+ +. .+...|++||+-...-..+.. .+...+.. +.+.=.++++.
T Consensus 299 ~lWPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~~---~p~~~~~~l~~~~~ffEFiP~ 372 (597)
T PLN02249 299 KIWPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFGINLNPMC---KPSEVSYTIMPNMAYFEFLPH 372 (597)
T ss_pred HhCCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEEEeecCCCC---CCCCcceEecCCcEEEEeeec
Confidence 44467 5555666644 4555555555 33 356799999954222111100 00111111 12333344432
Q ss_pred CCCC--------C---CCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccC----CeEEEEeccCC
Q 007257 404 PEMG--------Y---SPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN----GVVKIIDRKKN 468 (611)
Q Consensus 404 ~~~~--------~---~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~d----G~l~~~GR~~d 468 (611)
++.+ . ..+..|+.-||+|+.. .|.|. |+.||+.++..- =.|.+.||.+.
T Consensus 373 ~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~---~GLyR-------------Y~iGDvVrvtgf~~~~P~i~F~gR~~~ 436 (597)
T PLN02249 373 NHDGDGALDETSLVELADVEVGKEYELVITTY---AGLYR-------------YRVGDILRVTGFHNSAPQFKFIRRKNV 436 (597)
T ss_pred ccCCcccCCCCcEecHHHcCCCCeEEEEEEcc---cceeE-------------eecCCEEEEeeccCCCcEEEEEccCCc
Confidence 2211 0 1123456678888763 23332 899999998542 25899999999
Q ss_pred eEEcCCceecCcHHHHHHHhc
Q 007257 469 LIKISQGEYVALEYLENVYCV 489 (611)
Q Consensus 469 ~i~~~~G~~v~~~~iE~~l~~ 489 (611)
++.+ .|+++.-.+++.++.+
T Consensus 437 ~ls~-~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 437 LLSI-ESDKTDEADLQKAVEN 456 (597)
T ss_pred ceec-ccccCCHHHHHHHHHH
Confidence 9997 9999999999998865
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.93 E-value=0.00089 Score=71.40 Aligned_cols=141 Identities=14% Similarity=0.063 Sum_probs=86.2
Q ss_pred HHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceee-ccccCCCCCceeeccCCCccccCccCCCccCee-EEEeecCCC
Q 007257 330 ARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQ-GYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSE-LRLEEVPEM 406 (611)
Q Consensus 330 ~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~-~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~-v~i~~~~~~ 406 (611)
...-+++++|.+....-...-...++..+ |++++. .||+||+-...=..+..... ...+...|++. .++++.+++
T Consensus 289 ~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~p~--~~sy~L~p~~~yFEFip~~~~ 366 (606)
T PLN02247 289 KRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSDPS--DVSYTLLPNMAYFEFLPVDKN 366 (606)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCCcc--CCceeecCCcEEEEEeecCCC
Confidence 34558999998877666777777777655 666665 89999953222111111011 11222333332 223322221
Q ss_pred CC---------------------------CCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEcc---
Q 007257 407 GY---------------------------SPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILP--- 456 (611)
Q Consensus 407 ~~---------------------------~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~--- 456 (611)
+. ..+..|+.-||+|+.- .|.+. |+.||+.++..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~---~GLYR-------------YrlGDvv~V~GF~n 430 (606)
T PLN02247 367 NGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTF---TGLYR-------------YRVGDILMVTGFYN 430 (606)
T ss_pred cccccccccccccccccccccccCceecHHHccCCCeEEEEEEec---CceEE-------------EecCCEEEEeeecC
Confidence 10 1234566778888763 23222 89999988743
Q ss_pred -CCeEEEEeccCCeEEcCCceecCcHHHHHHHhc
Q 007257 457 -NGVVKIIDRKKNLIKISQGEYVALEYLENVYCV 489 (611)
Q Consensus 457 -dG~l~~~GR~~d~i~~~~G~~v~~~~iE~~l~~ 489 (611)
.=.|.+++|.+.++.+ .|+|++-.++-.++.+
T Consensus 431 ~~P~~~Fv~R~~~vlsi-~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 431 NAPQFRFVQRRNVVLSI-DTDKTNEEDLLKAVTQ 463 (606)
T ss_pred CCceEEEEecCCceeec-ccccCCHHHHHHHHHH
Confidence 3469999999999998 9999999988887754
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.82 E-value=0.0032 Score=67.19 Aligned_cols=165 Identities=15% Similarity=0.045 Sum_probs=96.2
Q ss_pred HHcCCceeEEEEecCCCCHHHHHHHHHHc-CCceee-ccccCCCCCceeeccCCCccccCccCCCccCee-EEEeecCCC
Q 007257 330 ARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQ-GYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSE-LRLEEVPEM 406 (611)
Q Consensus 330 ~~~~~~l~~i~~~G~~l~~~~~~~~~~~~-~~~v~~-~yG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~-v~i~~~~~~ 406 (611)
...-+++++|.+....-...-...++..+ |++++. .|++||+-...=..+..... ...+...|++. .++++++++
T Consensus 300 ~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p~--~~sy~L~p~~~yFEFip~~~~ 377 (612)
T PLN02620 300 TRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPS--EVSYTLIPTMAYFEFLPVHRN 377 (612)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCCCCcc--cceeeecCCcEEEEEeeccCc
Confidence 44558999988877766777667776555 676555 89999953322111111111 11122333332 223321111
Q ss_pred C----------------------CCCCCCCCCcEEEEecCCcccccCCChHhhhhhccCCccccCceEEEcc----CCeE
Q 007257 407 G----------------------YSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILP----NGVV 460 (611)
Q Consensus 407 ~----------------------~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l 460 (611)
+ ...+..|+.-||+|+.. .|.+. |+.||+.++.. .=.|
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~---~GLyR-------------YrlGDvv~V~Gf~n~~P~~ 441 (612)
T PLN02620 378 NGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTY---AGLYR-------------YRVGDVLRVAGFKNKAPQF 441 (612)
T ss_pred ccccccccccccccccccCccccHHHccCCCeEEEEEEec---CceEE-------------EecCCEEEEeeecCCCceE
Confidence 0 01134566778888763 23222 89999988743 3369
Q ss_pred EEEeccCCeEEcCCceecCcHHHHHHHhcCcC--------cceEEEEec--CCCCeEEEEEec
Q 007257 461 KIIDRKKNLIKISQGEYVALEYLENVYCVAPI--------IEDIWVYGD--SLKSMLVAVVVP 513 (611)
Q Consensus 461 ~~~GR~~d~i~~~~G~~v~~~~iE~~l~~~p~--------V~~~~v~~~--~~~~~~~a~vv~ 513 (611)
.+++|.+.+..+ .|+|++-.++-.++.+.-. +.|...... ..+.+-+.++++
T Consensus 442 ~Fv~R~~~~lsi-~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~PghYvl~~El 503 (612)
T PLN02620 442 SFICRKNVVLSI-DSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPGHYVLFWEL 503 (612)
T ss_pred EEEeecCceeec-ccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCCCceEEEEEE
Confidence 999999999998 9999999888777744221 223332222 224577777776
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.10 E-value=0.0025 Score=51.15 Aligned_cols=88 Identities=22% Similarity=0.074 Sum_probs=52.3
Q ss_pred ceecCcHHHHHHHhcCcCcc-eEEEEe--cCCCCeEEEEEecChHHHHHHHHHCCCCCcHHHHhccHHHHHHHHHHHHHH
Q 007257 475 GEYVALEYLENVYCVAPIIE-DIWVYG--DSLKSMLVAVVVPCEEDTKKWAYSNGHAGSFLELCSLVQLQNYILSELKNA 551 (611)
Q Consensus 475 G~~v~~~~iE~~l~~~p~V~-~~~v~~--~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 551 (611)
|.+|+|.+||++|.++|++. +..++- ....+.+...|+..++.. .+. ....++.+.+.+.|++.
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~----------~~~---~~~~~l~~~i~~~lk~~ 67 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFS----------DDA---EDLEALAERIAERLKER 67 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCC----------TTH---HHHHHHHHHHHHHHHHH
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccC----------cch---HHHHHHHHHHHHHHHhh
Confidence 78999999999999999998 444432 233357888888877531 000 02345666777777666
Q ss_pred HHhCCCCCcceeeeEEEecCCCCCCCCccccccccch
Q 007257 552 AERNKLRGFEHIKGVILDPRPFDMERDLVTATLKKKR 588 (611)
Q Consensus 552 ~~~~~l~~~~~p~~i~~~~~~~~~~~~P~t~~GKv~R 588 (611)
+. +. | .+.+++ .+++|++ .||..|
T Consensus 68 lg---v~----~-~V~lv~----~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 68 LG---VR----P-EVELVP----PGTLPRS-EGKAKR 91 (96)
T ss_dssp HS---S-----E-EEEEE-----TT-S----SSSS-S
T ss_pred cC---ce----E-EEEEEC----CCCccCC-CCcceE
Confidence 53 21 3 577775 3788998 678776
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.27 E-value=0.28 Score=50.38 Aligned_cols=89 Identities=9% Similarity=-0.020 Sum_probs=74.0
Q ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEE
Q 007257 26 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFV 103 (611)
Q Consensus 26 ~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~l 103 (611)
--+|+.|....+..+|+.|...|..+||+|.....-+. .-+.+.+|+.++|++++|+++.. .+.-..++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEE
Confidence 47899999999999999999999999999988766322 22678899999999999998844 4455678999999999
Q ss_pred EEcchhHHHHhc
Q 007257 104 FVQDKKVKELLS 115 (611)
Q Consensus 104 i~~~~~~~~~~~ 115 (611)
.+.+...-.+.+
T Consensus 187 ~~tps~~l~lae 198 (438)
T COG1541 187 AATPSYLLYLAE 198 (438)
T ss_pred EEChHHHHHHHH
Confidence 999987765533
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=84.14 E-value=8 Score=40.91 Aligned_cols=89 Identities=12% Similarity=0.034 Sum_probs=66.2
Q ss_pred CCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 007257 20 GKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPLYDTLGPGAVNFIL 95 (611)
Q Consensus 20 ~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 95 (611)
|.+|.. ..+|..++...+...+..+...|+++||++.+..+.+.. .....+++..+|+.+++... ......++
T Consensus 96 GTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i 172 (445)
T TIGR03335 96 GTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRII 172 (445)
T ss_pred CCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHH
Confidence 445544 357889999888888888888899999999998876643 23456788899998877643 23446778
Q ss_pred hhcCccEEEEcchhHH
Q 007257 96 DHAEIDFVFVQDKKVK 111 (611)
Q Consensus 96 ~~~~~~~li~~~~~~~ 111 (611)
++.++.+++.......
T Consensus 173 ~~~~~t~l~~~ps~ll 188 (445)
T TIGR03335 173 ESYRPTGIVASVFKLL 188 (445)
T ss_pred HHhCCCEEEECHHHHH
Confidence 8999999887665443
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=82.99 E-value=8.2 Score=40.47 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=69.4
Q ss_pred cCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEeeCCCCCChhHHHHH
Q 007257 19 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPLYDTLGPGAVNFI 94 (611)
Q Consensus 19 ~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~ 94 (611)
-|.+|..+ .+|..++...+..++..+...|+++||++....+.+. ......++...+|+.++++++.. .+.+...
T Consensus 84 SGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~ 162 (422)
T TIGR02155 84 SGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQL 162 (422)
T ss_pred CCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHH
Confidence 45566544 4566777666667777888889999999887665442 22334667889999999887764 4778889
Q ss_pred HhhcCccEEEEcchhHHHH
Q 007257 95 LDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 95 l~~~~~~~li~~~~~~~~~ 113 (611)
|++.++++++........+
T Consensus 163 i~~~~~t~l~~~Ps~l~~L 181 (422)
T TIGR02155 163 IQDFKPDIIMVTPSYMLNL 181 (422)
T ss_pred HHHHCCCEEEEcHHHHHHH
Confidence 9999999999988776654
No 142
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=82.70 E-value=20 Score=38.43 Aligned_cols=119 Identities=9% Similarity=-0.033 Sum_probs=79.7
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~ 83 (611)
++.++++.-+ .|.+|..+ .+|+..+...+..... ..|++++|++...++..-.+ +...++++..|+.++..+
T Consensus 166 ~~~~~~i~~T--SGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 240 (521)
T PRK06187 166 ENDAAAMLYT--SGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPR 240 (521)
T ss_pred ccceEEEEEC--CCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecC
Confidence 3456665542 45555443 6788888766655544 44889999998887765332 344455888899988776
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHhccccc---cccCccEEEEec
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCR---SAQRLRVMVCFT 131 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~---~~~~~~~i~~~~ 131 (611)
.. +.+.+...+++.++..+++.......+...... ....++.++...
T Consensus 241 ~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~G 290 (521)
T PRK06187 241 RF-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGG 290 (521)
T ss_pred CC-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcC
Confidence 64 888999999999999999988877666443322 234445544433
No 143
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=81.48 E-value=17 Score=37.98 Aligned_cols=114 Identities=10% Similarity=0.013 Sum_probs=78.1
Q ss_pred CCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP-QWVEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l~ 83 (611)
+++++++..+ .|.+|.. ..+|+..+...+..++..+ +++++|++...++..- -.+..+++.+..|+..+..+
T Consensus 110 ~~~~~~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 184 (436)
T TIGR01923 110 MDQIATLMFT--SGTTGKPKAVPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVD 184 (436)
T ss_pred cCceEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecc
Confidence 4566665542 4555543 4788988887766666544 7899999988777542 22345688889999988876
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEE
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVC 129 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~ 129 (611)
+. +.+...+.+.++.++.........+....... ..++.++.
T Consensus 185 ~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-~~l~~~~~ 226 (436)
T TIGR01923 185 KF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHN-ENLRKILL 226 (436)
T ss_pred hH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC-CceEEEEE
Confidence 53 38888999999999999888776665443322 44555544
No 144
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=81.42 E-value=18 Score=38.85 Aligned_cols=104 Identities=14% Similarity=0.087 Sum_probs=74.0
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~ 81 (611)
.++.++++.-+ .|.+|.. ..+|+..+...+...... .+++++|++...++..- .+...+++++..|+.+++
T Consensus 164 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 164 DPDDVADILFT--SGTTGRPKGAMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred CCCceEEEEeC--CCCCCCCCEEEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 34556655442 3555544 367888877655544433 37889999988877643 344567889999998877
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
. +..+++.+...+++.++.+++........+..
T Consensus 239 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 239 L-PVFDPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred c-CcCCHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 5 56788899999999999999998887766644
No 145
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=78.74 E-value=16 Score=37.96 Aligned_cols=122 Identities=14% Similarity=0.064 Sum_probs=83.8
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEe
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANC--PQWVEAMEACNALSLICV 80 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~-Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~ 80 (611)
.|+.++++.-+ -|.+|.. ..+|+..+...+..+. +... +++ |++...+|-+ ..++..+++.+..|+..+
T Consensus 153 ~~~~~~~i~~T--SGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~ 226 (417)
T PF00501_consen 153 SPDDPAFILFT--SGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLV 226 (417)
T ss_dssp TTTSEEEEEEE--SSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEE
T ss_pred CccceeEeecc--ccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccc
Confidence 46778877763 3555554 5789999988888877 4333 333 6666666655 334478899999999999
Q ss_pred eCCCCCC--hhHHHHHHhhcCccEEEEcchhHHHHhcccc-------ccccCccEEEEecCC
Q 007257 81 PLYDTLG--PGAVNFILDHAEIDFVFVQDKKVKELLSPDC-------RSAQRLRVMVCFTSL 133 (611)
Q Consensus 81 ~l~~~~~--~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-------~~~~~~~~i~~~~~~ 133 (611)
..+.... ++.+...+++.++..+++.+.....+.+... ..+..++.++...+.
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~ 288 (417)
T PF00501_consen 227 LPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEP 288 (417)
T ss_dssp EESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST
T ss_pred ccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8876644 5677899999999999999988877765221 134567777665543
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=77.47 E-value=26 Score=38.22 Aligned_cols=102 Identities=14% Similarity=-0.041 Sum_probs=71.2
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~l 82 (611)
++.++.+.-+ .|.+|..+ .+|+..+...+..+... .+++++|++...+|.. ..++..+++.+..|+..+..
T Consensus 198 ~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 198 PDDPINIQYT--SGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCcEEEEEc--CCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 4555555442 45566544 66777776555444333 3889999998877753 44556678889999988866
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
....++..+...+++.++.+++........+
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~ 303 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPTMFIAE 303 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchHHHHHH
Confidence 6667788899999999999998877755443
No 147
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=76.56 E-value=37 Score=36.89 Aligned_cols=121 Identities=12% Similarity=-0.027 Sum_probs=78.7
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~ 81 (611)
.||.+|++.-+ -|.+|..+ .+|+..+...+.... ...++.++|++...+|.. ..+...++..+..|+..+.
T Consensus 181 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~ 255 (539)
T PRK06334 181 DPEDVAVILFT--SGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVF 255 (539)
T ss_pred CcCCEEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEE
Confidence 45677776653 45556544 678888765544333 334788899988877743 2233445677788988777
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhccc---cccccCccEEEEec
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD---CRSAQRLRVMVCFT 131 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~~~~~~~~~i~~~~ 131 (611)
......++.+...|++.++.++...+.....+.... ....+.++.++.-.
T Consensus 256 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG 308 (539)
T PRK06334 256 AYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGG 308 (539)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECC
Confidence 655577889999999999999999887766554322 12234455554433
No 148
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=75.97 E-value=46 Score=34.27 Aligned_cols=121 Identities=12% Similarity=0.049 Sum_probs=83.0
Q ss_pred CCCCceeeeccccCCCCC--ceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGP--YVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~--~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~ 83 (611)
++.++++.-+ .|.+|. ...+|+..+...+..+.. ..+++++|++....+.+.. .+..+++.+..|+..+..+
T Consensus 119 ~~~~~~i~~T--SGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~ 193 (408)
T TIGR01733 119 PDDLAYVIYT--SGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPP 193 (408)
T ss_pred CCCcEEEEEc--CCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcC
Confidence 4556665542 344444 346678888766666554 3367789999888776644 4566788888898888776
Q ss_pred CCCC--hhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecC
Q 007257 84 DTLG--PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTS 132 (611)
Q Consensus 84 ~~~~--~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 132 (611)
.... ...+..++++.++..+++.......+..........++.++....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g~ 244 (408)
T TIGR01733 194 EDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGGE 244 (408)
T ss_pred hhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeCc
Confidence 6554 678889999999999999998877665544334456666655443
No 149
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=74.82 E-value=50 Score=35.06 Aligned_cols=104 Identities=12% Similarity=0.009 Sum_probs=71.6
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeC
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPL 82 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l 82 (611)
.++.++++.-+ -|.+|.. ..+|+..+...+... ....|++++|++...+|-.-. .+..+++.+..|+.++..
T Consensus 139 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 213 (483)
T PRK03640 139 DLDEVATIMYT--SGTTGKPKGVIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLV 213 (483)
T ss_pred CCCCeEEEEeC--CCcCCCCcEEEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEec
Confidence 45666665542 4555544 367887765543322 233588999999998875322 234467777889988766
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
+ ..+..++...+++.++.++...+.....+..
T Consensus 214 ~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 245 (483)
T PRK03640 214 E-KFDAEKINKLLQTGGVTIISVVSTMLQRLLE 245 (483)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 5 5678899999999999999998887766643
No 150
>PRK12583 acyl-CoA synthetase; Provisional
Probab=74.04 E-value=39 Score=36.79 Aligned_cols=102 Identities=10% Similarity=-0.030 Sum_probs=70.3
Q ss_pred CCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~l 82 (611)
++.+|++.-+ .|.+|.. ..+|+..+...+..+... .|++++|++....|-. ...+..+++++..|+.++..
T Consensus 200 ~~~~a~i~~T--SGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~ 274 (558)
T PRK12583 200 RDDPINIQYT--SGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYP 274 (558)
T ss_pred CCCcEEEEEC--CCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEee
Confidence 4455544432 4555543 477888886555544433 3788999988777643 45566778888899988855
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
.....+..+...+++.++.+++..+.....+
T Consensus 275 ~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 305 (558)
T PRK12583 275 NEAFDPLATLQAVEEERCTALYGVPTMFIAE 305 (558)
T ss_pred cCCCCHHHHHHHHHHcCCeEEeccHHHHHHH
Confidence 5567788888999999999998877665443
No 151
>PLN03051 acyl-activating enzyme; Provisional
Probab=71.71 E-value=41 Score=36.12 Aligned_cols=104 Identities=9% Similarity=-0.217 Sum_probs=69.6
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~ 83 (611)
|+.+|++.-+ -|.+|..+ .+|+..+...+... ....++.++|++...+|-+-. ....+++++..|+.++..+
T Consensus 118 ~~d~a~i~yT--SGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 118 VESVTNILFS--SGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred ccceEEEEeC--CCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 3556665542 45555544 56776655433322 234478899988776664422 2345678889999988776
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
.....+.+...+++.++.++.........+..
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 55567888999999999999998877765543
No 152
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=70.52 E-value=82 Score=33.71 Aligned_cols=93 Identities=14% Similarity=0.009 Sum_probs=68.6
Q ss_pred cCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 007257 19 DGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLYDTLGPGAVNFIL 95 (611)
Q Consensus 19 ~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 95 (611)
.|.+|.. ..+|+..+...+......+ ++++||++...+|.+-. .+..+++++..|+.++..+ ...++.+...+
T Consensus 170 SGTTG~PK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i 245 (515)
T TIGR03098 170 SGSTGRPKGVVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKAL 245 (515)
T ss_pred CCCCCCCceEEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHH
Confidence 4555543 4678888876666555433 67899999888886543 3456778899999988664 46788899999
Q ss_pred hhcCccEEEEcchhHHHHhc
Q 007257 96 DHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 96 ~~~~~~~li~~~~~~~~~~~ 115 (611)
++.++.++...+.....+..
T Consensus 246 ~~~~~t~~~~~P~~~~~l~~ 265 (515)
T TIGR03098 246 EKHGITGLAAVPPLWAQLAQ 265 (515)
T ss_pred HHcCCceEecChHHHHHHHh
Confidence 99999999999887766543
No 153
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=69.77 E-value=52 Score=35.95 Aligned_cols=104 Identities=8% Similarity=-0.084 Sum_probs=72.3
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l 82 (611)
++.+|++.-+ .|.+|..+ .+|+..+...+. ......+++++|++....+.... ....+++.+..|+..+..
T Consensus 204 ~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~ 278 (570)
T PRK04319 204 REDGAILHYT--SGSTGKPKGVLHVHNAMLQHYQ---TGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVID 278 (570)
T ss_pred CCCCEEEEeC--CCCCCCCCEEEEecHHHHHHHH---HHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEE
Confidence 4556665442 45556544 567777654433 33334478899987766655432 345577888999988887
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
....+++.+...+++.++.+++........+..
T Consensus 279 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 279 GGRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 777889999999999999999998887766643
No 154
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=68.42 E-value=38 Score=36.57 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=75.2
Q ss_pred eeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCe
Q 007257 188 GVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPT 265 (611)
Q Consensus 188 ~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t 265 (611)
+..+|+..+...+..+...+...+.+...+|++....|-..-+ ....+.++..|+.+.-... ++..+...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 7789999999888888777755444578899999999987533 2345666788888877766 899999999999999
Q ss_pred EEecchHHHHHHHHHHH
Q 007257 266 LLAGVPRVFEKIHEGIK 282 (611)
Q Consensus 266 ~l~~~p~~~~~l~~~~~ 282 (611)
+++.....+..+.....
T Consensus 122 iif~d~~~~~~i~~~~~ 138 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEATS 138 (537)
T ss_pred EEEEcCchHHHHHHHHh
Confidence 99999999888765443
No 155
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=67.66 E-value=49 Score=36.12 Aligned_cols=103 Identities=12% Similarity=0.034 Sum_probs=71.0
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEeeC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP-QWVEAMEACNALSLICVPL 82 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l 82 (611)
.|+.+|++..+ .|.+|..+ .+|+..+...+.... ...++.++|++...+|-.- -.+...++.+..|+..+..
T Consensus 170 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~ 244 (563)
T PLN02860 170 APDDAVLICFT--SGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL 244 (563)
T ss_pred CCCCeEEEEec--CCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec
Confidence 35666666553 46666655 667777655444332 3457889998888777542 2334567788889887765
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
+.+.+..+...+++.++.++...+.....+.
T Consensus 245 -~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 245 -PKFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred -CCCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 4578888999999999999999887766553
No 156
>PRK07788 acyl-CoA synthetase; Validated
Probab=65.84 E-value=68 Score=34.85 Aligned_cols=120 Identities=12% Similarity=0.017 Sum_probs=75.1
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~ 83 (611)
++.++++.-+ -|.+|..+ .+|+..+... ++......++.++|++...+|..-.+ +..+++++..|+.++..
T Consensus 206 ~~~~~~i~~T--SGTTG~PKgv~~s~~~~~~~---~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~- 279 (549)
T PRK07788 206 PKPGGIVILT--SGTTGTPKGAPRPEPSPLAP---LAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR- 279 (549)
T ss_pred CCCCcEEEEC--CCCCCCCCEEeccCccHHHH---HHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-
Confidence 3445544432 46666655 4455555443 33344455788999888776653322 23456677889887766
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHhccccc-----cccCccEEEEecC
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCR-----SAQRLRVMVCFTS 132 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~ 132 (611)
....++.+...+++.++..++..+.....+...... ..+.++.++...+
T Consensus 280 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~ 333 (549)
T PRK07788 280 RRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGS 333 (549)
T ss_pred CCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCC
Confidence 566788899999999999999998877766443221 2345555554443
No 157
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=65.53 E-value=51 Score=35.73 Aligned_cols=104 Identities=12% Similarity=-0.106 Sum_probs=67.4
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l 82 (611)
++.++++.-+ .|.+|..+ .+|...+... ..+..+. ..++.++|++..+.|-.-. .....++.+..|+.++..
T Consensus 175 ~~~~~~i~~T--SGTTG~PK~v~~s~~~~~~~--~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~ 250 (539)
T PRK07008 175 ENQASSLCYT--SGTTGNPKGALYSHRSTVLH--AYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLP 250 (539)
T ss_pred cccceEEEEC--CCCCCCCcEEEEecHHHHHH--HHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEe
Confidence 4445444332 45566544 5555554322 2233332 3478899998877764322 233346778899988877
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
.+...++.+...+++.++..+.........+.
T Consensus 251 ~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~ 282 (539)
T PRK07008 251 GPDLDGKSLYELIEAERVTFSAGVPTVWLGLL 282 (539)
T ss_pred cCCcCHHHHHHHHHHcCCEEEEechHHHHHHH
Confidence 77788899999999999999988877665554
No 158
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=65.37 E-value=68 Score=39.63 Aligned_cols=121 Identities=8% Similarity=-0.087 Sum_probs=80.4
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~ 83 (611)
||.+|++.-+ -|.+|..+ .+|...+...+..+.. ..++.++|++..+++-+.+ .+..+++++..|++++..+
T Consensus 414 ~~d~a~ii~T--SGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~ 488 (1389)
T TIGR03443 414 PDSNPTLSFT--SGSEGIPKGVLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPT 488 (1389)
T ss_pred CCCceEEEEC--CCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcC
Confidence 5566655442 46666554 6677777655443332 3478899998887765543 3456788889999887665
Q ss_pred CC--CChhHHHHHHhhcCccEEEEcchhHHHHhccccccccCccEEEEecC
Q 007257 84 DT--LGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTS 132 (611)
Q Consensus 84 ~~--~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 132 (611)
.. ..+..+...+++.++.++...+.....+........+.++.++...+
T Consensus 489 ~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe 539 (1389)
T TIGR03443 489 ADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQATTPIPSLHHAFFVGD 539 (1389)
T ss_pred hhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccccCCCccEEEEecc
Confidence 43 25668889999999999998887766654433334566666665544
No 159
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=65.00 E-value=88 Score=35.47 Aligned_cols=103 Identities=13% Similarity=-0.041 Sum_probs=69.7
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~ 81 (611)
.||.+|++.-+ .|.+|..+ .+|+..+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+.++.
T Consensus 363 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 363 QPEDAALILFT--SGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 45666665553 45666544 7788877666554443 33788999998887753 3445567888889998887
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
.+.......+...+.+.++.+++........+
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 469 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTSTFLGNY 469 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHHHHHHh
Confidence 66444455667788889999888776655443
No 160
>PLN03052 acetate--CoA ligase; Provisional
Probab=64.31 E-value=67 Score=36.50 Aligned_cols=104 Identities=10% Similarity=-0.207 Sum_probs=67.8
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~ 83 (611)
+|+++++--+ -|.+|..+ .+|...+.. .+.......+++++|++....+-+-. +...+++.+..|+..+..+
T Consensus 355 ~d~~a~IlyT--SGTTG~PKgVv~sh~~~l~---~~~~~~~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~ 429 (728)
T PLN03052 355 VEAFTNILFS--SGTTGEPKAIPWTQLTPLR---AAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYN 429 (728)
T ss_pred CCCcEEEEec--CCCCCCCceEEECchHHHH---HHHHHHHhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeC
Confidence 3666655542 45666555 445444322 22223334588999987766554432 3345668889999988876
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
.......+..++++.++.++.+....+..+..
T Consensus 430 g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~ 461 (728)
T PLN03052 430 GSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKN 461 (728)
T ss_pred CCCCCChHHHHHHHHCCCEEEECHHHHHHHHh
Confidence 54445678899999999999998887776644
No 161
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=63.89 E-value=1e+02 Score=28.25 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=40.7
Q ss_pred CcEEEEecch-hhHHHHHHHHH-HhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHH
Q 007257 217 DDVYLSFLPL-AHILDRVIEEY-FFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEK 276 (611)
Q Consensus 217 ~~~~l~~~p~-~~~~g~~~~~~-~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~ 276 (611)
+.+++.+.|- .|..|...... .-..|-.++.... +++.+.+.+++.+|+++..+-.+-..
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~ 148 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTT 148 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccC
Confidence 3444444442 47777765333 3456878877765 88999999999999998776554433
No 162
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=63.53 E-value=7.2 Score=35.22 Aligned_cols=33 Identities=24% Similarity=0.170 Sum_probs=26.0
Q ss_pred cHHHHHHHhcCcCcceEEEEecCCCCeEEEEEec
Q 007257 480 LEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVP 513 (611)
Q Consensus 480 ~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~ 513 (611)
...|+..+.+.|+|.+|.|+-.. ...++|+-+.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~-~~a~Vav~~~ 109 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTD-DNAYVAVDLD 109 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEEC-CEEEEEEEec
Confidence 36799999999999999999875 5566666544
No 163
>PRK07638 acyl-CoA synthetase; Validated
Probab=63.01 E-value=1e+02 Score=32.79 Aligned_cols=101 Identities=10% Similarity=0.002 Sum_probs=69.3
Q ss_pred CceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCCCCC
Q 007257 10 RMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLYDTL 86 (611)
Q Consensus 10 ~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~ 86 (611)
+|++.-+ -|.+|..+ .+|...+...+... ....+++++|++....+-.-. ++...+..+..|+..+.. +..
T Consensus 145 ~a~i~~T--SGtTG~PKgv~~s~~~~~~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~ 218 (487)
T PRK07638 145 PFYMGFT--SGSTGKPKAFLRAQQSWLHSFDCN---VHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKF 218 (487)
T ss_pred cEEEEeC--CCCCCCCcEEEEecHHHHHHHHHH---HHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCC
Confidence 4444432 45666554 56666665544433 334478899998877665433 345666777889988765 567
Q ss_pred ChhHHHHHHhhcCccEEEEcchhHHHHhcc
Q 007257 87 GPGAVNFILDHAEIDFVFVQDKKVKELLSP 116 (611)
Q Consensus 87 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 116 (611)
++.++...+++.++.++...+.....+...
T Consensus 219 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 219 IPNQVLDKLETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred CHHHHHHHHHHcCCeEEEeCcHHHHHHHhC
Confidence 788999999999999999998887776544
No 164
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=62.95 E-value=81 Score=35.24 Aligned_cols=104 Identities=10% Similarity=-0.080 Sum_probs=65.9
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
++.+|++.-+ -|.+|..+ .+|...+... .+...-...+++++|++..+.+.+......+++.+..|++.+..+.
T Consensus 262 ~~~~a~ilyT--SGTTG~PKgV~~sh~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~ 337 (655)
T PRK03584 262 FDHPLWILYS--SGTTGLPKCIVHGHGGILLE--HLKELGLHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDG 337 (655)
T ss_pred CCCcEEEEec--CCCCCCCceEEECccHHHHH--HHHHHHHhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCC
Confidence 3566655442 45566555 4455443221 1111122347889998877666554433446788899999887653
Q ss_pred ---CCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 85 ---TLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 85 ---~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
...++.+..++++.++..+.+.......+.
T Consensus 338 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 370 (655)
T PRK03584 338 SPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACE 370 (655)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHH
Confidence 235778889999999999988877766553
No 165
>PLN02736 long-chain acyl-CoA synthetase
Probab=62.36 E-value=98 Score=34.57 Aligned_cols=105 Identities=10% Similarity=-0.070 Sum_probs=72.1
Q ss_pred CCCCeEEEEEe--cCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEE
Q 007257 169 QPFNICTIMYT--SGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVG 246 (611)
Q Consensus 169 ~~~~~a~i~~T--SGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~ 246 (611)
.|+.+++.... .|.+|. -..+|...+...+..+...+.. .++..+|++...++-..-+ ....+.++..|+.++
T Consensus 57 ~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~--~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~v 131 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQ--HGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSV 131 (651)
T ss_pred CCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEE
Confidence 45566654321 233222 2447888888888777666543 3788999998888766432 223455678888888
Q ss_pred EecC--ChHHHHHHHhhhcCeEEecchHHHHHHH
Q 007257 247 YYHG--DLNALRDDLMELKPTLLAGVPRVFEKIH 278 (611)
Q Consensus 247 ~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 278 (611)
.+.. .+..+...+++.++++++..+..+..+.
T Consensus 132 pl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~ 165 (651)
T PLN02736 132 PLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLL 165 (651)
T ss_pred EeecCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 7765 8899999999999999999887665543
No 166
>PRK06188 acyl-CoA synthetase; Validated
Probab=62.33 E-value=98 Score=33.31 Aligned_cols=103 Identities=14% Similarity=-0.001 Sum_probs=71.7
Q ss_pred CCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 7 PGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
++.+|++..+ .|.+|.. ..+|+..+...+.. .....+++.++++...+|-+-.+...+++.+..|+..+..+.
T Consensus 167 ~~~~a~i~~T--SGtTG~pk~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~ 241 (524)
T PRK06188 167 PPDIAGLAYT--GGTTGKPKGVMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK 241 (524)
T ss_pred CCCeEEEEeC--CCCCCCCceeeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC
Confidence 3445555553 3445543 35677776655443 334457889999988888776555667778888998887754
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
..+..+...+++.++.+++........+..
T Consensus 242 -~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 271 (524)
T PRK06188 242 -FDPAEVLRAIEEQRITATFLVPTMIYALLD 271 (524)
T ss_pred -CCHHHHHHHHHHhCCEEEEehHHHHHHHHh
Confidence 567889999999999999988877655543
No 167
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=61.49 E-value=67 Score=34.42 Aligned_cols=104 Identities=13% Similarity=-0.046 Sum_probs=71.6
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~ 81 (611)
.||.++++.-+ .|.+|.. ..+|+..+...+.... ....+++++|++...+|-... +...+++.+..|+.++.
T Consensus 159 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~ 234 (508)
T TIGR02262 159 QADDPAFWLYS--SGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVL 234 (508)
T ss_pred CCCCcEEEEeC--CCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEE
Confidence 35666666553 3455543 4667777765543321 233488999998887776543 33456677888998888
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
.+...+...+...|++.++.+++..+.....+
T Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~ 266 (508)
T TIGR02262 235 MGERPTPDAVFDRLRRHQPTIFYGVPTLYAAM 266 (508)
T ss_pred eCCCCCHHHHHHHHHHHCCcEEecchHHHHHH
Confidence 77777888999999999999999988755544
No 168
>PRK06164 acyl-CoA synthetase; Validated
Probab=60.84 E-value=69 Score=34.63 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=73.0
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP-QWVEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l~ 83 (611)
++.++++.-+ .|.+|..+ .+|...+...+..++..+ ++.+++++...+|.+- -.+..+++.+..|+.++..
T Consensus 180 ~~~~~~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~- 253 (540)
T PRK06164 180 PDAGALLFTT--SGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE- 253 (540)
T ss_pred CCceEEEEEC--CCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-
Confidence 5677777743 45555544 667777776665555444 6789999988887652 2345678888889887766
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
+......+...|++.++.+++........+.
T Consensus 254 ~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~ 284 (540)
T PRK06164 254 PVFDAARTARALRRHRVTHTFGNDEMLRRIL 284 (540)
T ss_pred CCCCHHHHHHHHHHhCCeeecCCHHHHHHHH
Confidence 4567788899999999999998887766553
No 169
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=60.68 E-value=74 Score=33.32 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=74.2
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC--CchhHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGA--NCPQWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~~~ 81 (611)
.||..+.+.-+ -|.+|.. .++|..++.+.+..++..+ |+...+++++-.| ++.-.++..+|++.-|++.+.
T Consensus 232 ~pdd~~niQFT--SGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vf 306 (596)
T KOG1177|consen 232 SPDDAVNIQFT--SGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVF 306 (596)
T ss_pred CCCCceEEEec--cCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEe
Confidence 35555443331 3444433 5899999999888776544 6666445544333 234567888999999999999
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
-+|.+.+..+-..+.+-+|..++..+.....+.
T Consensus 307 p~~~f~~k~alqai~~ekcT~l~gtPtM~~Dll 339 (596)
T KOG1177|consen 307 PAPSFDPKDALQAISNEKCTTLYGTPTMFVDLL 339 (596)
T ss_pred eCCCCChHHHHHHHHhhceEEEecChHHHHHHh
Confidence 999999999889999999999999887665554
No 170
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=60.42 E-value=49 Score=31.22 Aligned_cols=54 Identities=24% Similarity=0.218 Sum_probs=43.5
Q ss_pred HHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCc
Q 007257 45 RASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEI 100 (611)
Q Consensus 45 ~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~ 100 (611)
...|+.++|++. .+|-.- -....+++++..|++.+.+ ++++++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556899999999 887652 3446789999999998888 68899998888887765
No 171
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=58.72 E-value=1.5e+02 Score=32.12 Aligned_cols=103 Identities=10% Similarity=0.056 Sum_probs=70.8
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~ 81 (611)
.+|.+|++.-+ .|.+|..+ .+|+..+...+.. .....++++++++...+|-+- .++..+++.+..|+.++.
T Consensus 195 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~ 269 (547)
T PRK13295 195 GPDDVTQLIYT--SGTTGEPKGVMHTANTLMANIVP---YAERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVL 269 (547)
T ss_pred CCcceeEEEeC--CCCCCCCCEEEeccHHHHHHHHH---HHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEe
Confidence 34566665542 45566554 5677776555444 334457889999888877652 245667788899998876
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
.+ ....+.+...+++.++.+++........+.
T Consensus 270 ~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 270 QD-IWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred CC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 54 567888999999999999888776665543
No 172
>PLN02246 4-coumarate--CoA ligase
Probab=57.83 E-value=1.2e+02 Score=32.80 Aligned_cols=106 Identities=10% Similarity=-0.066 Sum_probs=71.3
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEe
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICV 80 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~ 80 (611)
.|+.++++.-+ -|.+|..+ .+|+..+...+........ ..++.++|++...+|-.-. +...+++.+..|+.++
T Consensus 177 ~~~~~~~i~~T--SGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 254 (537)
T PLN02246 177 SPDDVVALPYS--SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAIL 254 (537)
T ss_pred CccCEEEEEeC--CCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEE
Confidence 35666665542 45555443 6688877665544333222 3478899999887775432 2345677888999988
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
..+. ...+++...+++.++.++.........+.
T Consensus 255 ~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 287 (537)
T PLN02246 255 IMPK-FEIGALLELIQRHKVTIAPFVPPIVLAIA 287 (537)
T ss_pred EeCC-CCHHHHHHHHHHhCceEEEcchHHHHHHh
Confidence 8754 57788899999999999988877665553
No 173
>PRK05852 acyl-CoA synthetase; Validated
Probab=57.58 E-value=1.9e+02 Score=31.16 Aligned_cols=94 Identities=12% Similarity=-0.059 Sum_probs=65.3
Q ss_pred cCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEee-CCCCCChhHHHH
Q 007257 19 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP-LYDTLGPGAVNF 93 (611)
Q Consensus 19 ~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~-l~~~~~~~~l~~ 93 (611)
-|.+|..+ .+|+..+...+..+...+ +++++|++....|..- .+...+++++..|...+. -...+++..+..
T Consensus 185 SGTTG~PKgv~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 261 (534)
T PRK05852 185 GGTTGLPKMVPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWD 261 (534)
T ss_pred CCCCCCCcEEEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHH
Confidence 45555544 557777776665555433 6889998888777543 355567777788776553 234567778888
Q ss_pred HHhhcCccEEEEcchhHHHHhc
Q 007257 94 ILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 94 ~l~~~~~~~li~~~~~~~~~~~ 115 (611)
.+++.++..++..+.....+..
T Consensus 262 ~i~~~~~t~~~~~P~~~~~l~~ 283 (534)
T PRK05852 262 DIKAVGATWYTAVPTIHQILLE 283 (534)
T ss_pred HHHHcCCcEEEcChHHHHHHHh
Confidence 9999999999998887766544
No 174
>PRK08308 acyl-CoA synthetase; Validated
Probab=56.85 E-value=1.4e+02 Score=30.95 Aligned_cols=102 Identities=13% Similarity=0.021 Sum_probs=70.5
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~ 81 (611)
.|+.++++.-+ .|.+|..+ .+|+..+...+..+... .++..+|++...+|..- .++..+++.+..|+..+.
T Consensus 99 ~~~~~~~i~~T--SGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~ 173 (414)
T PRK08308 99 LAEEPSLLQYS--SGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVI 173 (414)
T ss_pred CCCCceEEEEC--CCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEe
Confidence 35566665543 45666544 67888887655555443 46678888877776543 345567888899998877
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
.+. .++..+...+++.++.+++..+.....+
T Consensus 174 ~~~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l 204 (414)
T PRK08308 174 ITN-KNPKFALNILRNTPQHILYAVPLMLHIL 204 (414)
T ss_pred cCC-CCHHHHHHHHHHhCCeEEEcCHHHHHHH
Confidence 654 5677788889999999988887766554
No 175
>PRK07529 AMP-binding domain protein; Validated
Probab=56.61 E-value=1.6e+02 Score=32.80 Aligned_cols=121 Identities=16% Similarity=-0.003 Sum_probs=76.3
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~ 81 (611)
.+|.+|++.-+ .|.+|.. -.+|+..+...+..++.. .++.++|++...+|-. ......+++.+..|+.++.
T Consensus 211 ~~d~~a~i~~T--SGTTG~PK~v~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~ 285 (632)
T PRK07529 211 GPDDVAAYFHT--GGTTGMPKLAQHTHGNEVANAWLGALL---LGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVL 285 (632)
T ss_pred CcCceEEEEEC--CCccCcCCEEEEcHHHHHHHHHHHHHh---cCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEe
Confidence 45677766653 4555543 467787776655444432 3678899888877743 2334567888889998887
Q ss_pred CCCC-CC----hhHHHHHHhhcCccEEEEcchhHHHHhcccc--ccccCccEEEEec
Q 007257 82 LYDT-LG----PGAVNFILDHAEIDFVFVQDKKVKELLSPDC--RSAQRLRVMVCFT 131 (611)
Q Consensus 82 l~~~-~~----~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~--~~~~~~~~i~~~~ 131 (611)
.++. +. ...+..++++.++.+++........+..... .....++.++.-.
T Consensus 286 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~slr~v~~gg 342 (632)
T PRK07529 286 ATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHDISSLRYALCGA 342 (632)
T ss_pred cCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCCccceEEEEEcC
Confidence 6653 21 2456678999999999998877766544321 1234455454433
No 176
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=55.32 E-value=1.1e+02 Score=33.06 Aligned_cols=103 Identities=16% Similarity=0.025 Sum_probs=71.1
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~ 81 (611)
.++.+|++.-+ .|.+|.. ..+|+..+...+..... ..++.++|++...+|-.- .+...+++.+..|+.++.
T Consensus 188 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~ 262 (546)
T PRK08314 188 GPDDLAVLPYT--SGTTGVPKGCMHTHRTVMANAVGSVL---WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVL 262 (546)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEecHHHHHHHHHHHH---hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEe
Confidence 35666665542 4555543 46788887765554433 336788998887776532 244567788999999888
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
.+ ...+..+...+++.++.++.........+.
T Consensus 263 ~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll 294 (546)
T PRK08314 263 MP-RWDREAAARLIERYRVTHWTNIPTMVVDFL 294 (546)
T ss_pred cC-CCCHHHHHHHHHHhcCceecccHHHHHHHH
Confidence 75 467788889999999999988887665543
No 177
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=54.06 E-value=1.3e+02 Score=33.44 Aligned_cols=121 Identities=12% Similarity=-0.001 Sum_probs=74.3
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEee
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 81 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~ 81 (611)
++.++++.-+ -|.+|..+ .+|...+. ..++..+.. .+++++|++...++-+-. ....+++.+..|+..+.
T Consensus 231 ~~~~a~ilyT--SGTTG~PKgV~~sh~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~ 305 (628)
T TIGR02316 231 SNEPSYILYT--SGTTGKPKGVQRDVGGYA---VALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVL 305 (628)
T ss_pred CCCcEEEEEC--CCCCCCCceEEECCcHHH---HHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEE
Confidence 4566665543 45566555 34444432 123333333 488999988777665432 23457888899998887
Q ss_pred CCC---CCChhHHHHHHhhcCccEEEEcchhHHHHhcccc-----ccccCccEEEEecC
Q 007257 82 LYD---TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC-----RSAQRLRVMVCFTS 132 (611)
Q Consensus 82 l~~---~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~ 132 (611)
.+. ...+..+..++++.++.++++.......+..... ..+..++.++.-.+
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 306 YEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGE 364 (628)
T ss_pred eCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 653 2346778899999999999998887766544221 12345555555443
No 178
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=54.03 E-value=1.4e+02 Score=36.61 Aligned_cols=123 Identities=11% Similarity=-0.062 Sum_probs=81.3
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEeeC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPL 82 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l 82 (611)
.|+.+|++.-+ -|.+|..+ .+|.+.+...+.. .....++.++|++...++-+.+. +.-+++.+..|+..+..
T Consensus 596 ~~~~~a~i~~T--SGSTG~PKgV~~~h~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 596 QPHHTAYIIFT--SGSTGRPKGVMVGQTAIVNRLLW---MQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEeccHHHHHHHHH---HHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEEC
Confidence 35666665543 46666554 6677766554433 23345889999999988887664 34567778899998877
Q ss_pred CCC--CChhHHHHHHhhcCccEEEEcchhHHHHhcccc-----ccccCccEEEEecCC
Q 007257 83 YDT--LGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC-----RSAQRLRVMVCFTSL 133 (611)
Q Consensus 83 ~~~--~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~ 133 (611)
++. ..++.+..++++.++.++.........+..... .....++.++.-.+.
T Consensus 671 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 728 (1296)
T PRK10252 671 EPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEA 728 (1296)
T ss_pred ChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCC
Confidence 653 467789999999999999888876665543211 122455666555443
No 179
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=53.96 E-value=1.7e+02 Score=32.16 Aligned_cols=102 Identities=7% Similarity=-0.163 Sum_probs=68.9
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l 82 (611)
++.+|++.-+ .|.+|..+ .+|+..+...+..+... .+++++|++...+|-.-. +...+++.+..|+..+.
T Consensus 198 ~~~~a~il~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~- 271 (600)
T PRK08279 198 AKDTAFYIYT--SGTTGLPKAAVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL- 271 (600)
T ss_pred ccccEEEEEc--CCCCCCCcEEEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-
Confidence 4555555442 45566544 67888887766655443 578899999888876543 33455566677777665
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
.+.+.+..+...+.+.++.++.........+.
T Consensus 272 ~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~ 303 (600)
T PRK08279 272 RRKFSASRFWDDVRRYRATAFQYIGELCRYLL 303 (600)
T ss_pred cCCCCHHHHHHHHHHhcceEEeehHHHHHHHH
Confidence 45677788888899999999887766555443
No 180
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=53.65 E-value=1.5e+02 Score=35.79 Aligned_cols=105 Identities=8% Similarity=-0.091 Sum_probs=72.8
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~ 81 (611)
.+|.+|++.-+ .|.+|..+ .+|...+...+..... ..++.++|++...+|-. ..+....++.+..|+..+.
T Consensus 780 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 780 KPDDTATIIFS--SGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCEEEEEEC--CCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 35667766553 45555544 6677777665554433 34678899887776643 2334446777888988887
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
.+...+.+.+...+++.++.++...+.....+..
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 7666788899999999999999998877765543
No 181
>PLN03102 acyl-activating enzyme; Provisional
Probab=53.49 E-value=95 Score=34.05 Aligned_cols=97 Identities=15% Similarity=0.014 Sum_probs=69.7
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.++++. .+ -.+|...+...+..+...+.. .++..+|++...+|-.- -.....+.++..|+.++.+
T Consensus 27 ~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~--~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl 94 (579)
T PLN03102 27 YPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLIS--LNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPI 94 (579)
T ss_pred CCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeec
Confidence 456667653 11 248888888888777666543 26888999988888653 2223355668889888887
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHHHHHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRVFEKI 277 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 277 (611)
.. ++..+...++..++++++..+.....+
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (579)
T PLN03102 95 NTRLDATSIAAILRHAKPKILFVDRSFEPLA 125 (579)
T ss_pred cccCCHHHHHHHHhccCCeEEEEChhhHHHH
Confidence 76 889999999999999999877655433
No 182
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=53.41 E-value=1.3e+02 Score=33.60 Aligned_cols=102 Identities=11% Similarity=-0.056 Sum_probs=61.6
Q ss_pred CCCceeeeccccCCCCCceE--EeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCC--
Q 007257 8 GNRMLGWRPFVDGKFGPYVW--KTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLY-- 83 (611)
Q Consensus 8 d~~a~~~~~~~~~~~~~~~~--~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~-- 83 (611)
++++++.-+ -|.+|..+- +|...+.. ..+.......+++++|++....+-+-.....+++.+..|++.+..+
T Consensus 264 ~d~~~ilyT--SGTTG~PKgV~~sh~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~G~t~vl~~g~ 339 (652)
T TIGR01217 264 DHPLWILFS--SGTTGLPKCIVHSAGGTLV--QHLKEHGLHCDLGPGDRLFYYTTTGWMMWNWLVSGLATGATLVLYDGS 339 (652)
T ss_pred CCCEEEEEc--CCCCCCCCeEEecccHHHH--HHHHHHHhccCCCCCcEEEEeCCcchhhhHHHHHHHhcCcEEEEECCC
Confidence 555555442 455665553 44433221 1111222234889999888777665433333557888999888775
Q ss_pred CCC-ChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 84 DTL-GPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 84 ~~~-~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
|.+ .++.+-.++++.++.++.+.......+
T Consensus 340 ~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 370 (652)
T TIGR01217 340 PGFPATNVLWDIAERTGATLFGTSAKYVMAC 370 (652)
T ss_pred CCCCCchHHHHHHHHhCCeEEecCHHHHHHH
Confidence 333 466788999999999876665544443
No 183
>PLN02654 acetate-CoA ligase
Probab=52.91 E-value=1.6e+02 Score=33.10 Aligned_cols=104 Identities=10% Similarity=-0.028 Sum_probs=66.9
Q ss_pred CCCCceeeeccccCCCCCceE--EeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEee
Q 007257 7 PGNRMLGWRPFVDGKFGPYVW--KTYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 81 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~~--~Ty~ql~~~~~~lA~~L~-~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~ 81 (611)
++.++++.-+ -|.+|..+- +|..-+.. ..+..+. ..+++++|++...++-+-- ....+++.+..|++++.
T Consensus 274 ~~d~~~ilyT--SGTTG~PKgVv~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl 348 (666)
T PLN02654 274 AEDPLFLLYT--SGSTGKPKGVLHTTGGYMV---YTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLV 348 (666)
T ss_pred CCCceEEEec--CCCCCCCceEEecccHHHH---HHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEE
Confidence 4566665553 455665553 34443321 1122222 3488999987776664422 23456788899999887
Q ss_pred CCC--C-CChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 82 LYD--T-LGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 82 l~~--~-~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
.+. . ..++.+-.++++.++.++.+.......+..
T Consensus 349 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 385 (666)
T PLN02654 349 FEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMR 385 (666)
T ss_pred ECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHh
Confidence 763 2 357788899999999999999887776654
No 184
>PLN02565 cysteine synthase
Probab=52.86 E-value=95 Score=31.13 Aligned_cols=72 Identities=13% Similarity=0.014 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 36 EVLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 36 ~~~~lA~~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
-+..+-..+.+.|. .+|....+....+=.-..+.+++..+|..+..+-|...+......++..+++++++++
T Consensus 49 ~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 49 IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 34444455556664 7886655555556666777778888999888777777788888999999999999875
No 185
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=52.06 E-value=2e+02 Score=31.12 Aligned_cols=108 Identities=17% Similarity=0.090 Sum_probs=78.2
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~ 81 (611)
.||.+|++..+ .|.+|.. ..+|+..+...+..+...+... +.+.|++...+|-. .-+...+++.+..|...+.
T Consensus 169 ~~~d~a~i~yT--SGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~ 245 (534)
T COG0318 169 DPDDLAFLLYT--SGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVL 245 (534)
T ss_pred CCCCEEEEEeC--CCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEe
Confidence 46777877653 4555544 4678888888876666666432 67888877777754 3456678888999999888
Q ss_pred CCC-CCChhHHHHHHhhcCccEEEEcchhHHHHhcc
Q 007257 82 LYD-TLGPGAVNFILDHAEIDFVFVQDKKVKELLSP 116 (611)
Q Consensus 82 l~~-~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~ 116 (611)
..+ .+.++.+...+...++..+.........+...
T Consensus 246 ~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~ 281 (534)
T COG0318 246 LSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDN 281 (534)
T ss_pred CCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhC
Confidence 876 68888888889888888888877776665443
No 186
>PRK09274 peptide synthase; Provisional
Probab=51.79 E-value=76 Score=34.47 Aligned_cols=100 Identities=13% Similarity=0.122 Sum_probs=68.5
Q ss_pred CCCCeEEEEEecCCC-CCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEE
Q 007257 169 QPFNICTIMYTSGTS-GDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGY 247 (611)
Q Consensus 169 ~~~~~a~i~~TSGTT-G~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~ 247 (611)
.|+.++++....++. ...+...+|...+...+..+...+.. .++..+|++....+-.. -.....+.++..|+..+.
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~--~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA--AGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVL 95 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEE
Confidence 355666654333221 12233368888888888777666643 26788999988887553 223345667888999888
Q ss_pred ecC--ChHHHHHHHhhhcCeEEecch
Q 007257 248 YHG--DLNALRDDLMELKPTLLAGVP 271 (611)
Q Consensus 248 ~~~--~~~~~~~~i~~~~~t~l~~~p 271 (611)
++. ....+...+++.++..++..+
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEecc
Confidence 766 778888999999999998765
No 187
>PRK08316 acyl-CoA synthetase; Validated
Probab=51.29 E-value=1.8e+02 Score=31.16 Aligned_cols=102 Identities=14% Similarity=-0.050 Sum_probs=69.3
Q ss_pred CCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEeeCC
Q 007257 8 GNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPLY 83 (611)
Q Consensus 8 d~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~ 83 (611)
+.+|.+.-+ -|.+|.. ..+|+..+... ++......+++++|++...+|-.- .+...+++++..|+..++.+
T Consensus 171 ~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~ 245 (523)
T PRK08316 171 DDLAQILYT--SGTESLPKGAMLTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD 245 (523)
T ss_pred CCeEEEEeC--CCCCCCCcEEEEecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec
Confidence 344544332 3444433 46788877554 344455558999999988777543 23345667788999988875
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
. ..++.+...+++.++.++++.+.....+..
T Consensus 246 ~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 276 (523)
T PRK08316 246 A-PDPELILRTIEAERITSFFAPPTVWISLLR 276 (523)
T ss_pred C-CCHHHHHHHHHHhCCeEEEeCHHHHHHHHc
Confidence 3 468889999999999999998877655543
No 188
>PRK06839 acyl-CoA synthetase; Validated
Probab=50.54 E-value=2.8e+02 Score=29.38 Aligned_cols=104 Identities=9% Similarity=-0.062 Sum_probs=69.4
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~ 81 (611)
.+|.++++.-+ .|.+|..+ .+|+..+...+. ......+++++|++...+|-.-. +....++.+..|+..+.
T Consensus 147 ~~~~~~~i~~T--SGTTG~PK~v~~s~~~l~~~~~---~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~ 221 (496)
T PRK06839 147 NESASFIICYT--SGTTGKPKGAVLTQENMFWNAL---NNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV 221 (496)
T ss_pred CCCCcEEEEeC--CCCCCCCcEEEEEhHHHHHHHH---HHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE
Confidence 44667666543 45555543 667777654332 22344578899998887775432 23345677888887664
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
.....++++...+++.++.++.........+..
T Consensus 222 -~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 254 (496)
T PRK06839 222 -PRKFEPTKALSMIEKHKVTVVMGVPTIHQALIN 254 (496)
T ss_pred -ccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHh
Confidence 356678888899999999999988887766644
No 189
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.12 E-value=1.7e+02 Score=32.08 Aligned_cols=105 Identities=10% Similarity=-0.112 Sum_probs=69.7
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEeeC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPL 82 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l 82 (611)
.|+.++++.-+ -|.+|..+ .+|+..+...+..+. .....++.+++++...+|-.-.+ ....++.+..|...+..
T Consensus 179 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~ 255 (576)
T PRK05620 179 DETTAAAICYS--TGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFP 255 (576)
T ss_pred CccceeEEEEC--CCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEec
Confidence 34555665543 45566554 667777654433221 12234788999998887765432 34457777889888777
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
.+..+++.+...+.+.++.+++........+
T Consensus 256 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 256 GPDLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 6677889999999999999998877655443
No 190
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=49.70 E-value=1.1e+02 Score=34.17 Aligned_cols=96 Identities=16% Similarity=0.058 Sum_probs=69.5
Q ss_pred CCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEec
Q 007257 170 PFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYH 249 (611)
Q Consensus 170 ~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 249 (611)
++.+|++....+ .+ ....+|...+...+..+...+.. .++..+|++...+|..--. ....+.++..|+..+.+.
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLN--LNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLF 148 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeC
Confidence 566676543221 11 13568999998888887776643 3789999999999887422 234556678888877766
Q ss_pred C--ChHHHHHHHhhhcCeEEecch
Q 007257 250 G--DLNALRDDLMELKPTLLAGVP 271 (611)
Q Consensus 250 ~--~~~~~~~~i~~~~~t~l~~~p 271 (611)
. .+..+...+++.+++++++..
T Consensus 149 ~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 149 DGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcc
Confidence 5 899999999999999999865
No 191
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=49.11 E-value=2.2e+02 Score=30.80 Aligned_cols=104 Identities=12% Similarity=0.010 Sum_probs=71.5
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH---HHHHHHHHhcCCEEe
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW---VEAMEACNALSLICV 80 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~---~~~~lA~~~~G~~~~ 80 (611)
.+|.+|++.-+ .|.+|.. ..+|...+...+..... ..+++++|++...+|-.-.+ ...+++++..|+..+
T Consensus 180 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~ 254 (536)
T PRK10946 180 PADEVAFFQLS--GGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVV 254 (536)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEE
Confidence 45666666543 4555554 46788888776665443 34788999988887754332 224678888999887
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
... ......+..++.+.++.++.........+..
T Consensus 255 ~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 255 LAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred ECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 654 4466777888999999999998877665543
No 192
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=48.79 E-value=2.6e+02 Score=30.09 Aligned_cols=103 Identities=10% Similarity=-0.033 Sum_probs=69.9
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH--HH-HHHHHHhcCCEEe
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW--VE-AMEACNALSLICV 80 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~--~~-~~lA~~~~G~~~~ 80 (611)
.++.+|++.-+ -|.+|.. ..+|...+...+.... ...++.++|++...+|..-.+ .. ..++++..|++.+
T Consensus 181 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v 255 (527)
T TIGR02275 181 KSDEVAFFQLS--GGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVV 255 (527)
T ss_pred CCCccEEEEeC--CCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEE
Confidence 45666666553 4555544 4678887766554433 344788899988887755332 22 3677788898876
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
..+ ...+..+...+++.++.++.........+.
T Consensus 256 ~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 256 LAP-DPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred ECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 644 456777888999999999999887776554
No 193
>PRK07470 acyl-CoA synthetase; Validated
Probab=48.43 E-value=2.6e+02 Score=30.03 Aligned_cols=107 Identities=12% Similarity=0.011 Sum_probs=67.4
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC-
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL- 82 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l- 82 (611)
.++.++++.-+ .|.+|.. ..+|+..+...+......+. .+..++|++..++|-+-.+-...+..+..|+..+.+
T Consensus 161 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~ 237 (528)
T PRK07470 161 DHDDPCWFFFT--SGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLP 237 (528)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEec
Confidence 34566666553 4555544 46777777543332211111 256788988888886644333333344556555544
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
....+++.+...+++.++.++.........+..
T Consensus 238 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 238 SERFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred ccCcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 346788899999999999999998888766643
No 194
>PRK11761 cysM cysteine synthase B; Provisional
Probab=47.03 E-value=1.2e+02 Score=29.94 Aligned_cols=76 Identities=8% Similarity=0.051 Sum_probs=52.8
Q ss_pred eHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 29 TYKEVYEEVLQIVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 29 Ty~ql~~~~~~lA~~L~~~G-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
||++ +-+..+...+.+.| +.+|+.|.. ...+=.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 41 S~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 41 SVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred Cchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 4444 33444444555666 467777654 4445556677778889998777766666667778889999999999986
No 195
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=46.78 E-value=1.2e+02 Score=33.58 Aligned_cols=99 Identities=16% Similarity=0.133 Sum_probs=71.5
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.+|++.... .+|. .-.+|...+...+..+...+.. .++..+|++...+|... -.....+.++..|+..+.+
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKS--LGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEecc
Confidence 567778765322 1222 3568889888888777766643 37889999999988663 2233456678889888877
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
.. .+..+...++..+++++++....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 170 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADEG 170 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 65 88999999999999999987654
No 196
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=46.63 E-value=3e+02 Score=29.27 Aligned_cols=102 Identities=9% Similarity=-0.130 Sum_probs=69.0
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~ 83 (611)
++.++++.-+ -|.+|..+ .+|+..+...+..+.. ..++..++++....|.+.. .+..+++++..|+..+..+
T Consensus 140 ~~~~~~il~T--SGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~ 214 (502)
T TIGR01734 140 GDDNYYIIYT--SGSTGNPKGVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLD 214 (502)
T ss_pred CCCeEEEEEC--CCCCCCCCEEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcC
Confidence 4445544442 45555544 7788887665544333 3478888888877766533 3556778899999998887
Q ss_pred CC--CChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 84 DT--LGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 84 ~~--~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
+. .....+...+.+.++..+.........+
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 215 KDITNNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 54 3566788889999999988887765543
No 197
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=46.24 E-value=2.4e+02 Score=25.92 Aligned_cols=59 Identities=14% Similarity=0.076 Sum_probs=40.0
Q ss_pred CcEEEEecch-hhHHHHHHHHH-HhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHH
Q 007257 217 DDVYLSFLPL-AHILDRVIEEY-FFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFE 275 (611)
Q Consensus 217 ~~~~l~~~p~-~~~~g~~~~~~-~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~ 275 (611)
+.+++.+.|- .|..|...... .-..|-.++.... +++.+.+.+.+.+|+++..+-.+-.
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~ 145 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTT 145 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccc
Confidence 3445555553 47777765433 3466888776654 7899999999999998876654333
No 198
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=46.23 E-value=3e+02 Score=29.70 Aligned_cols=102 Identities=11% Similarity=0.098 Sum_probs=68.3
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~ 81 (611)
.++.+|++.-+ .|.+|..+ .+|+..+...+... ....+++.+|++...+|-.- .++..++..+..|...+.
T Consensus 193 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~ 267 (538)
T TIGR03208 193 SPDDVTQLIYT--SGTTGEPKGVMHTANTLFSNIHPY---AERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL 267 (538)
T ss_pred CCCCeEEEEEC--CCCCCCCcEEEeehHHHHHHHHHH---HhhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe
Confidence 45666665542 45566554 55666665444333 33447888999888887653 345556777788887665
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
. +.+.+..+...+++.++.++.........+
T Consensus 268 ~-~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 268 Q-DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred c-CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 4 466788889999999999988877666544
No 199
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=45.57 E-value=1.9e+02 Score=32.89 Aligned_cols=105 Identities=14% Similarity=0.075 Sum_probs=71.9
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccc-cCCCCCC-----------cEEEEecchhhHHHHHHHH
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQF-EDKMTVD-----------DVYLSFLPLAHILDRVIEE 236 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~-~~~~~~~-----------~~~l~~~p~~~~~g~~~~~ 236 (611)
.++.+|++....| .+ -..+|...+...+..+...+... ..++..+ |++...++-.. --+...+
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADL 148 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHH
Confidence 3566776533222 11 14588888888888877776432 2256665 78877777552 2233455
Q ss_pred HHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHH
Q 007257 237 YFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIH 278 (611)
Q Consensus 237 ~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 278 (611)
.++..|+..+.+.. .++.+...++.-++.+++..+..+..+.
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~ 192 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLL 192 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHH
Confidence 66888988887766 8999999999999999998776665554
No 200
>PRK13383 acyl-CoA synthetase; Provisional
Probab=45.42 E-value=2.7e+02 Score=29.81 Aligned_cols=96 Identities=13% Similarity=-0.018 Sum_probs=63.3
Q ss_pred cCCCCCceEEeHHHH-HHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeCCCCCChhHHHHHHh
Q 007257 19 DGKFGPYVWKTYKEV-YEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLYDTLGPGAVNFILD 96 (611)
Q Consensus 19 ~~~~~~~~~~Ty~ql-~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~ 96 (611)
.|.+|..+-+.+... ..........+...+++++|++...+|-.-. .....++.+..|+.+++.. ....+.+...++
T Consensus 183 SGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~ 261 (516)
T PRK13383 183 SGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHR-HFDAEAALAQAS 261 (516)
T ss_pred CCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECC-CCCHHHHHHHHH
Confidence 566776665544322 1112222334445588999999887764422 2344566677898887654 567888888999
Q ss_pred hcCccEEEEcchhHHHHhc
Q 007257 97 HAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 97 ~~~~~~li~~~~~~~~~~~ 115 (611)
..++..+.........+..
T Consensus 262 ~~~~t~~~~~P~~~~~l~~ 280 (516)
T PRK13383 262 LHRADAFTAVPVVLARILE 280 (516)
T ss_pred HhCCcEEEecHHHHHHHHh
Confidence 9999999998887766543
No 201
>PRK13388 acyl-CoA synthetase; Provisional
Probab=45.13 E-value=2.1e+02 Score=31.01 Aligned_cols=102 Identities=5% Similarity=-0.145 Sum_probs=66.2
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~ 81 (611)
.+|.+|++..+ -|.+|..+ .+|+..+...+..+. ...+++++|++...+|..-. +...+++.+..|+..+.
T Consensus 148 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~ 222 (540)
T PRK13388 148 DAMDPFMLIFT--SGTTGAPKAVRCSHGRLAFAGRALT---ERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL 222 (540)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEecHHHHHHHHHHHH---HHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE
Confidence 35677776653 45555544 667777765444443 33478899998887765432 23334456777877664
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
.+..+...+...+++.++.++.........+
T Consensus 223 -~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l 253 (540)
T PRK13388 223 -PAKFSASGFLDDVRRYGATYFNYVGKPLAYI 253 (540)
T ss_pred -CCCCCHHHHHHHHHHhCCeEEEehHHHHHHH
Confidence 4556788888999999999987665544433
No 202
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=43.84 E-value=2.7e+02 Score=25.91 Aligned_cols=92 Identities=12% Similarity=0.109 Sum_probs=0.0
Q ss_pred CCCcEEEEecchh-hHHHHHH-HHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecc---hHHHHHHHHHHHHHHHh
Q 007257 215 TVDDVYLSFLPLA-HILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGV---PRVFEKIHEGIKKALEE 287 (611)
Q Consensus 215 ~~~~~~l~~~p~~-~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~---p~~~~~l~~~~~~~~~~ 287 (611)
..+.+++.+.+-. |..|... ....-..|-.++.... +++.+.+.+.+++|+++..+ +..+..+.+..+.....
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred hchHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHhhHHHHHHcCCceeEEEEecCCCCHHHHH
Q 007257 288 LRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEE 352 (611)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~ 352 (611)
-. .++ ++.||.+++++..+
T Consensus 167 ~~---------------------------------------------~~~-i~vGG~~~~~~~~~ 185 (213)
T cd02069 167 GI---------------------------------------------KIP-LLIGGAATSRKHTA 185 (213)
T ss_pred CC---------------------------------------------CCe-EEEEChhcCHHHHh
No 203
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=43.68 E-value=1.3e+02 Score=26.56 Aligned_cols=31 Identities=13% Similarity=0.010 Sum_probs=23.8
Q ss_pred HHHHHHHhcCcCcceEEEEecCCCCeEEEEEe
Q 007257 481 EYLENVYCVAPIIEDIWVYGDSLKSMLVAVVV 512 (611)
Q Consensus 481 ~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv 512 (611)
..|.+.+.+.|+|.+|.++-.. ...++++-.
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg-~~A~Vgv~~ 87 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITG-NYAYVGVDL 87 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEEC-CEEEEEEEc
Confidence 5588888999999999998865 556666543
No 204
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=43.63 E-value=1.4e+02 Score=30.66 Aligned_cols=64 Identities=6% Similarity=-0.044 Sum_probs=48.2
Q ss_pred HHHcC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 44 LRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 44 L~~~G-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
..+.| +.+|....+....+-.-..+.++|...|..+..+-|...+.+...+++..++++++++.
T Consensus 101 a~~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 101 AEKKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HHHcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 33455 67785545555566666777888899999888777776777778999999999999874
No 205
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=43.35 E-value=1.5e+02 Score=33.06 Aligned_cols=99 Identities=15% Similarity=0.089 Sum_probs=71.0
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.+|++.... .. .....+|.+.+...+..+...+.. .++..+|++...+|-.--+ ....+.++..|+..+.+
T Consensus 80 ~p~~~Al~~~~~-~~--~~~~~lTy~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGD-DP--GDSRKITYRELHREVCRFANALKS--LGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECC-CC--CceEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEec
Confidence 467778764321 11 124568999998888887776643 3678899999888766322 23355668889988887
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
.. .+..+...++..++.++++....
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 180 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITADEG 180 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCcc
Confidence 66 78999999999999999986653
No 206
>PRK07787 acyl-CoA synthetase; Validated
Probab=42.52 E-value=2.6e+02 Score=29.49 Aligned_cols=101 Identities=12% Similarity=-0.074 Sum_probs=68.6
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~l 82 (611)
++.+|++.-+ .|.+|..+ .+|+..+...+..++. ..++.++|++...+|-. .-+...+++.+..|+.++..
T Consensus 127 ~~~~a~i~~T--SGTTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 201 (471)
T PRK07787 127 PDAPALIVYT--SGTTGPPKGVVLSRRAIAADLDALAE---AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHT 201 (471)
T ss_pred CCceEEEEEC--CCCCCCCCEEEEeHHHHHHHHHHHHH---hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEec
Confidence 4556555442 45555444 6688887776555543 34678899877666542 33456688889999998876
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
. ..+++.+...++ .++..+...+.....+.
T Consensus 202 ~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 202 G-RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred C-CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 5 457788888888 89998888777665543
No 207
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=42.51 E-value=65 Score=27.61 Aligned_cols=41 Identities=7% Similarity=-0.066 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---chhHHHHHHHHHhcCCE
Q 007257 38 LQIVSALRASGAEPGCRVGIYGAN---CPQWVEAMEACNALSLI 78 (611)
Q Consensus 38 ~~lA~~L~~~Gv~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~ 78 (611)
..++..|.+.|+.+++.|.+++.. +.....+.+++..+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 478888999999999999999875 56667777888888865
No 208
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=42.22 E-value=4e+02 Score=32.09 Aligned_cols=104 Identities=9% Similarity=-0.044 Sum_probs=71.2
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~~~ 81 (611)
.||.+|++.-+ .|.+|..+ .+|.+.+...+...+. ..+++++|++...+|-. ..+...++..+..|...+.
T Consensus 791 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 791 DPDDPAVILFT--SGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred CCCCcEEEEEC--CCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 46677666553 45566544 6688887666555543 33678999988887753 2333556677788988887
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
.+.....+.+...+.+.++.++...+.....+.
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 765555667778899999999998877665543
No 209
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=41.89 E-value=3.2e+02 Score=29.58 Aligned_cols=103 Identities=11% Similarity=-0.061 Sum_probs=70.2
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEeeC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPL 82 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l 82 (611)
.++.+|++.-+ .|.+|..+ .+|+..+...+... ....++++++++...+|-.-. .+..+++.+..|+.+++.
T Consensus 178 ~~~~~a~il~T--SGTTG~PK~V~~t~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~ 252 (542)
T PRK06155 178 QPGDTAAILYT--SGTTGPSKGVCCPHAQFYWWGRNS---AEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLE 252 (542)
T ss_pred CCCCeEEEEEC--CCCCCCCcEEEEEHHHHHHHHHHH---HHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEee
Confidence 34566665543 45566544 55787776544333 334478899999887775433 234568888889887766
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
+ ..+++.+...|++.++.++.........+.
T Consensus 253 ~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 283 (542)
T PRK06155 253 P-RFSASGFWPAVRRHGATVTYLLGAMVSILL 283 (542)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEchHHHHHHHH
Confidence 5 567889999999999999988877655543
No 210
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=41.54 E-value=1.9e+02 Score=32.70 Aligned_cols=87 Identities=15% Similarity=-0.013 Sum_probs=64.7
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeE
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 266 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 266 (611)
..+|...+...+..+...+.. .++..++++...++-..- .+...+.++..|+..+.+.. .++.+...++..++.+
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~--lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVA--LGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 457888888877777665543 267889998888875532 23345556788888887765 8899999999999999
Q ss_pred EecchHHHHHHH
Q 007257 267 LAGVPRVFEKIH 278 (611)
Q Consensus 267 l~~~p~~~~~l~ 278 (611)
+++....+..+.
T Consensus 182 li~~~~~~~~l~ 193 (696)
T PLN02387 182 VICDSKQLKKLI 193 (696)
T ss_pred EEECHHHHHHHH
Confidence 999877666554
No 211
>PRK07514 malonyl-CoA synthase; Validated
Probab=40.75 E-value=1.9e+02 Score=30.77 Aligned_cols=87 Identities=14% Similarity=0.034 Sum_probs=64.1
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeE
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 266 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 266 (611)
..+|...+...+..+...+.. .++..++++....+-.. -.....+.++..|+..+.++. .+..+...++..+++.
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~--~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVA--LGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 468888887777776665543 26788999888877652 223345566888988887766 7888999999999999
Q ss_pred EecchHHHHHHH
Q 007257 267 LAGVPRVFEKIH 278 (611)
Q Consensus 267 l~~~p~~~~~l~ 278 (611)
++..+.....+.
T Consensus 104 ii~~~~~~~~~~ 115 (504)
T PRK07514 104 VVCDPANFAWLS 115 (504)
T ss_pred EEEccchhHHHH
Confidence 999887765543
No 212
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.74 E-value=88 Score=23.54 Aligned_cols=65 Identities=20% Similarity=0.189 Sum_probs=51.3
Q ss_pred EEeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccE
Q 007257 27 WKTYKEVYEEVLQIVS---ALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDF 102 (611)
Q Consensus 27 ~~Ty~ql~~~~~~lA~---~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ 102 (611)
..||++|.+...-.+. .|....++.+|-++|+.=++..+ .-++.++..-+.+++...+++.++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 6799999888776654 46666888999999997776543 24577888889999999999988775
No 213
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=40.27 E-value=1.9e+02 Score=28.51 Aligned_cols=67 Identities=9% Similarity=0.031 Sum_probs=46.9
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 41 VSALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 41 A~~L~~~G-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
.....+.| +.+|++| +....+=.-..+.+++.+.|..+..+-|...+.....+++..++++++++..
T Consensus 45 l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 45 IWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 33455556 4678776 4444444556666778889987777666655566678899999999999764
No 214
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=40.13 E-value=1.1e+02 Score=31.44 Aligned_cols=65 Identities=15% Similarity=0.084 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCccEEEEc
Q 007257 38 LQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVFVQ 106 (611)
Q Consensus 38 ~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~~~~l~~~l~~~~~~~li~~ 106 (611)
..+.-.|+..|+++||-|.+ ++.-|++..=++...|+.++.++-+ ++++.+...|... .++|+.-
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 34444566678999995543 4667888889999999999987633 5788888888774 5666553
No 215
>PLN02614 long-chain acyl-CoA synthetase
Probab=39.40 E-value=2.8e+02 Score=31.11 Aligned_cols=86 Identities=8% Similarity=-0.110 Sum_probs=64.2
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeE
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 266 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 266 (611)
..+|...+...+..+...+.. .++..+|++...++-+.- .....+.++..|+..+.+.. .+..+...++..++++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~Gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRS--VGVKDEAKCGIYGANSPE-WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCE
Confidence 346888888877777666643 378889999888886642 23345566888988887766 8899999999999999
Q ss_pred EecchHHHHHH
Q 007257 267 LAGVPRVFEKI 277 (611)
Q Consensus 267 l~~~p~~~~~l 277 (611)
++.....+..+
T Consensus 155 vi~~~~~~~~~ 165 (666)
T PLN02614 155 VFVEEKKISEL 165 (666)
T ss_pred EEECHHHHHHH
Confidence 99887655444
No 216
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=39.17 E-value=98 Score=22.39 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=26.8
Q ss_pred cEEEEecCCcccccCCChHhhhhhccCCccccCceEEEccCCeEEEEe
Q 007257 417 GEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIID 464 (611)
Q Consensus 417 Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~G 464 (611)
|.+|++-..-. .|-|+..||...+...+++++.+
T Consensus 25 G~vWlT~~g~~--------------~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGDP--------------DDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCCC--------------CCEEECCCCEEEeCCCCEEEEEe
Confidence 99999764311 26689999999999888888866
No 217
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=38.95 E-value=2.5e+02 Score=24.03 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=39.6
Q ss_pred cEEEEecch-hhHHHHHHHH-HHhhcCceEEEecC--ChHHHHHHHhhhcCeEEecchHH
Q 007257 218 DVYLSFLPL-AHILDRVIEE-YFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 218 ~~~l~~~p~-~~~~g~~~~~-~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
.+++.+.+. .|..|..... ..-..|-.++.... .++.+.+.+.+++++++..+-..
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~ 64 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLY 64 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCcc
Confidence 344444444 3777776533 34467888888776 88999999999999998776543
No 218
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=38.35 E-value=1.1e+02 Score=31.36 Aligned_cols=16 Identities=13% Similarity=0.148 Sum_probs=7.5
Q ss_pred ceeeecc-HhHHHhhhh
Q 007257 187 KGVVLTH-ETIATFVSG 202 (611)
Q Consensus 187 K~v~~s~-~~l~~~~~~ 202 (611)
-|.+++. ..+...+..
T Consensus 189 gG~v~~~~~~~~~~~~~ 205 (376)
T TIGR02379 189 GGALLINDQAFIERAEI 205 (376)
T ss_pred ceEEEECCHHHHHHHHH
Confidence 3444443 455555444
No 219
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=38.30 E-value=1.6e+02 Score=21.49 Aligned_cols=37 Identities=8% Similarity=0.092 Sum_probs=26.1
Q ss_pred cCcHHHHHHHhcCcCcceEEEEecCCCCeEEEEEecCh
Q 007257 478 VALEYLENVYCVAPIIEDIWVYGDSLKSMLVAVVVPCE 515 (611)
Q Consensus 478 v~~~~iE~~l~~~p~V~~~~v~~~~~~~~~~a~vv~~~ 515 (611)
-...++.+.|.++|.|.+|..+..+ ...+.-+.+.+.
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vtG~-~d~~~~v~~~d~ 46 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVTGE-YDLILKVRARDM 46 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEESSS-SSEEEEEEESSH
T ss_pred chHHHHHHHHHcCCCEEEEEEEeCC-CCEEEEEEECCH
Confidence 4467899999999999999988754 344444444443
No 220
>PLN00011 cysteine synthase
Probab=38.30 E-value=2.1e+02 Score=28.71 Aligned_cols=71 Identities=8% Similarity=0.041 Sum_probs=50.1
Q ss_pred HHHHHHHHHHcC-CCCC-CEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 37 VLQIVSALRASG-AEPG-CRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 37 ~~~lA~~L~~~G-v~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
+..+...+.+.| +.+| +.|. ....+-.-..+.++|..+|..+..+-|...+.....+++..+++++++++.
T Consensus 52 a~~~l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 52 AYSMIKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 333344455555 6777 5554 355556667777888899987777766666677788999999999998853
No 221
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.02 E-value=1.7e+02 Score=31.87 Aligned_cols=85 Identities=15% Similarity=0.030 Sum_probs=63.8
Q ss_pred eeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEE
Q 007257 190 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 267 (611)
Q Consensus 190 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l 267 (611)
.+|+..+...+..+...+... ++..+|++....|-..- .....+.++..|+..+.+.. .+..+...+.+.++..+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~--gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRAL--GVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 478888888777776665432 67889999888877643 22345566888888887766 88999999999999999
Q ss_pred ecchHHHHHH
Q 007257 268 AGVPRVFEKI 277 (611)
Q Consensus 268 ~~~p~~~~~l 277 (611)
+........+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 9887765544
No 222
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=37.80 E-value=81 Score=32.20 Aligned_cols=65 Identities=20% Similarity=0.119 Sum_probs=41.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCccEEEEcc
Q 007257 39 QIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 39 ~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~~~~l~~~l~~~~~~~li~~~ 107 (611)
.+-..|...|+++||.|++- ...+....-|+..+|+.++.++-+ ++++.+...++.- .++|+...
T Consensus 52 Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~-t~ai~~~h 121 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPK-TKAILVVH 121 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTT-EEEEEEE-
T ss_pred HHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccC-ccEEEEec
Confidence 34445667899999988775 445666778888999988887633 4677787777643 35555543
No 223
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=37.72 E-value=2.2e+02 Score=30.44 Aligned_cols=102 Identities=10% Similarity=-0.079 Sum_probs=69.7
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.++++.... .+.. -.+|...+...+..+...+.. .++..++++....+-..-+- ...+.++..|+..+..
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~--~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l 92 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYS--LGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPI 92 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEc
Confidence 456677654321 1211 346777787777776655432 36788899888877664332 3455668889888877
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHHHHHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRVFEKI 277 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 277 (611)
.. .+..+...+++.+++.++..+.....+
T Consensus 93 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 93 NARLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 66 889999999999999999988765443
No 224
>PRK05857 acyl-CoA synthetase; Validated
Probab=37.58 E-value=1.5e+02 Score=32.03 Aligned_cols=95 Identities=16% Similarity=0.060 Sum_probs=68.2
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.++++.. .| ...+|...+...+..+...+.. .++..++++...++-.. -.+...+.++..|+..+.+
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRA--QSVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMA 96 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHH--hCcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEec
Confidence 4666666532 22 1358888888887777665543 36788999988887654 2233466678889998888
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
+. .+..+...++..++..++..+..
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccc
Confidence 76 78888999999999999888754
No 225
>PLN03013 cysteine synthase
Probab=37.57 E-value=2e+02 Score=30.19 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=54.1
Q ss_pred eHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 29 TYKEVYEEVLQIVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 29 Ty~ql~~~~~~lA~~L~~~G-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
|+++ +-+..+-..+.+.| +.+|....+....+-.-+.+.++|...|..+..+-|...+.+....++..++++++++.
T Consensus 152 SfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~ 229 (429)
T PLN03013 152 SVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (429)
T ss_pred ccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 4444 23334444455566 57886555666666666777778888998777766666677778889999999999975
Q ss_pred h
Q 007257 108 K 108 (611)
Q Consensus 108 ~ 108 (611)
.
T Consensus 230 ~ 230 (429)
T PLN03013 230 A 230 (429)
T ss_pred C
Confidence 4
No 226
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=37.49 E-value=3.2e+02 Score=28.78 Aligned_cols=102 Identities=9% Similarity=-0.116 Sum_probs=57.2
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEeeC
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC-PQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~~~l 82 (611)
.|+.++++..+ -|.+|..+ .+|+..+...+..++..+ ++.+. ++...+|-. .-.+..++.++..|++++..
T Consensus 118 ~~~~~~~i~~T--SGTTG~PKgV~~t~~~l~~~~~~~~~~~---~~~~~-~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~ 191 (452)
T PRK07445 118 NLETGWIMIPT--GGSSGQIRFAIHTWETLTASVQGFQRYF---QLQQV-NSFCVLPLYHVSGLMQFMRSFLTGGKLVIL 191 (452)
T ss_pred CCCCcEEEEeC--CCCCCCCcEEEechHHHHHHHHHHHHHh---cCCCC-ceEeccCchhhhhHHHHHHHHHcCCeEEEc
Confidence 35667776543 46666555 668888877666665544 45443 344444443 22245567778889988877
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
+..... .........++.++...+.....+.
T Consensus 192 ~~~~~~-~~~~~~~~~~~t~~~~vP~~l~~l~ 222 (452)
T PRK07445 192 PYKRLK-SGQELPPNPSDFFLSLVPTQLQRLL 222 (452)
T ss_pred ChHhcc-chhhhhhhcCceEEEehHHHHHHHH
Confidence 532111 1122233455666666666555543
No 227
>PLN02574 4-coumarate--CoA ligase-like
Probab=37.11 E-value=1.8e+02 Score=31.62 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=68.9
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.++.++++. +.+| ..+|...+...+..+...+.. ..++..+|++....+-.. -....++.++..|+..+.+
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~-~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYH-VMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCc
Confidence 355666553 2222 136788777777766665532 026888999998887553 3333456678889998887
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHHHHHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRVFEKI 277 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 277 (611)
+. ....+...+++.++..++..+.....+
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 76 788899999999999999888765544
No 228
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=36.84 E-value=1.3e+02 Score=30.89 Aligned_cols=12 Identities=25% Similarity=0.313 Sum_probs=5.3
Q ss_pred HhhcCccEEEEc
Q 007257 95 LDHAEIDFVFVQ 106 (611)
Q Consensus 95 l~~~~~~~li~~ 106 (611)
+...+++.++++
T Consensus 88 ~~~~G~~~v~~d 99 (375)
T PRK11706 88 FVLRGAKIVFVD 99 (375)
T ss_pred HHHcCCEEEEEe
Confidence 344444444443
No 229
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=36.50 E-value=4.4e+02 Score=28.43 Aligned_cols=98 Identities=9% Similarity=-0.081 Sum_probs=63.8
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l 82 (611)
++.++++.-+ -|.+|..+ .+|+..+...+.. .....++.++|++...+|-.-. ++..+++.+..|+..+..
T Consensus 186 ~~d~a~i~~T--SGTTG~PK~v~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~ 260 (547)
T PRK06087 186 GDELAAVLFT--SGTEGLPKGVMLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLL 260 (547)
T ss_pred CCCeEEEEeC--CCCCCCCcEEEEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEec
Confidence 4555555442 35555544 4567666544332 3344478899998887775432 445667777889888876
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhH
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKV 110 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~ 110 (611)
.. .+++.+...+.+.++.+++......
T Consensus 261 ~~-~~~~~~~~~i~~~~~t~~~~~~~~~ 287 (547)
T PRK06087 261 DI-FTPDACLALLEQQRCTCMLGATPFI 287 (547)
T ss_pred CC-CCHHHHHHHHHHcCCCEEeccHHHH
Confidence 54 5677888889999999888654433
No 230
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=35.96 E-value=2e+02 Score=28.01 Aligned_cols=91 Identities=15% Similarity=0.103 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCC----ChhHHHHHHhhcCccEEEEcchhH
Q 007257 35 EEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTL----GPGAVNFILDHAEIDFVFVQDKKV 110 (611)
Q Consensus 35 ~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~----~~~~l~~~l~~~~~~~li~~~~~~ 110 (611)
.|...+|..|++.| ..|..++.+....... .+...|..+..++-.. ..+++..+|++.+++++|+|.-..
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 57888999998764 4677776665554333 3457888777775432 244688899999999999997432
Q ss_pred HH-HhccccccccCccEEEEecCCc
Q 007257 111 KE-LLSPDCRSAQRLRVMVCFTSLT 134 (611)
Q Consensus 111 ~~-~~~~~~~~~~~~~~i~~~~~~~ 134 (611)
.. ...... .....+++++|..
T Consensus 92 ~~~~~~~~k---~~~~~l~~iDD~~ 113 (279)
T TIGR03590 92 DADWEKLIK---EFGRKILVIDDLA 113 (279)
T ss_pred CHHHHHHHH---HhCCeEEEEecCC
Confidence 21 211111 2233566666653
No 231
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=35.80 E-value=2.4e+02 Score=27.84 Aligned_cols=71 Identities=8% Similarity=0.052 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 37 VLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 37 ~~~lA~~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
+..+...+.+.|. .+|+.|+ ....+-.-..+.+++...|..+..+-|...+......++..++++++++..
T Consensus 42 a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 42 ALSMIEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3333444555564 6777664 455555566677788889987777666665566678899999999998764
No 232
>PRK07798 acyl-CoA synthetase; Validated
Probab=35.70 E-value=2.5e+02 Score=30.04 Aligned_cols=87 Identities=11% Similarity=-0.110 Sum_probs=62.0
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeE
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 266 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 266 (611)
-.+|...+...+..+...+... ++..++++....+-.. -.....+.++..|+..+..+. ....+...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~--g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQ--GLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 3588888877777776665432 6777888877765442 222334556788888887776 7889999999999999
Q ss_pred EecchHHHHHHH
Q 007257 267 LAGVPRVFEKIH 278 (611)
Q Consensus 267 l~~~p~~~~~l~ 278 (611)
++........+.
T Consensus 104 ~~~~~~~~~~~~ 115 (533)
T PRK07798 104 LVYEREFAPRVA 115 (533)
T ss_pred EEEchhhHHHHH
Confidence 998876655543
No 233
>PRK05850 acyl-CoA synthetase; Validated
Probab=35.42 E-value=2.6e+02 Score=30.54 Aligned_cols=104 Identities=13% Similarity=0.042 Sum_probs=71.1
Q ss_pred CCCCeEEEEEec-CC-CCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEE
Q 007257 169 QPFNICTIMYTS-GT-SGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVG 246 (611)
Q Consensus 169 ~~~~~a~i~~TS-GT-TG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~ 246 (611)
.|+.++++.... +. .|. ...+|+..+...+..+...+... + ..+|++....+-.. -.....+.++..|+.++
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~--g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~v 87 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRH--G-STGDRAVILAPQGL-EYIVAFLGALQAGLIAV 87 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHh--C-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEE
Confidence 456677654321 11 122 24688888888877776666433 3 46888888888553 33334666788899888
Q ss_pred EecC-----ChHHHHHHHhhhcCeEEecchHHHHHHH
Q 007257 247 YYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIH 278 (611)
Q Consensus 247 ~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 278 (611)
.++. ....+...++..++..++..+.....+.
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 8763 4678899999999999999888766553
No 234
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=35.05 E-value=2.2e+02 Score=22.30 Aligned_cols=65 Identities=12% Similarity=-0.018 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHcCC---------CCCCEEEEE-cCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 007257 31 KEVYEEVLQIVSALRASGA---------EPGCRVGIY-GANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFIL 95 (611)
Q Consensus 31 ~ql~~~~~~lA~~L~~~Gv---------~~gd~V~i~-~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 95 (611)
.+.-+|...+...+.+.|. ++-|.|.++ .|+......+.+++...|.+-.-.-+.++.+++..++
T Consensus 16 ~~~~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 16 KDSPDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred hhcHHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 3335556666666666665 345667776 6666667788999999998766666778888877665
No 235
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.95 E-value=5.2e+02 Score=27.83 Aligned_cols=103 Identities=14% Similarity=0.051 Sum_probs=65.1
Q ss_pred CCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCch-hHHHHHHHHHhcCCEEeeCC
Q 007257 8 GNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGA-EPGCRVGIYGANCP-QWVEAMEACNALSLICVPLY 83 (611)
Q Consensus 8 d~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv-~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l~ 83 (611)
+.++++.-+ -|.+|..+ .+|+..+...+..+. ...++ ..++++....|..- -.+..+++.+..|+..+..+
T Consensus 174 ~~~a~i~~T--SGTTG~PK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 248 (542)
T PRK07786 174 DSPALIMYT--SGTTGRPKGAVLTHANLTGQAMTCL---RTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYP 248 (542)
T ss_pred CCeEEEEeC--CCCCccchhhhhhHHHHHHHHHHHH---HhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEcc
Confidence 345544442 45556554 567777765554432 33355 45555555544321 12456778888999887654
Q ss_pred -CCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 84 -DTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 84 -~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
....++.+...+++.++.++...+.....+..
T Consensus 249 ~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 281 (542)
T PRK07786 249 LGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCA 281 (542)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHh
Confidence 34578889999999999999998887766544
No 236
>PRK06145 acyl-CoA synthetase; Validated
Probab=34.64 E-value=5.8e+02 Score=26.98 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=67.9
Q ss_pred CCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~ 81 (611)
.|+.++++.-+ .|.+|.. ..+|+..+...+. ......++..++++....|-.-. +....++++..|+..+.
T Consensus 147 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~ 221 (497)
T PRK06145 147 APTDLVRLMYT--SGTTDRPKGVMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRI 221 (497)
T ss_pred CccceEEEEeC--CCCCCCCcEEEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEE
Confidence 34556554432 4555543 4677777764433 33444588999998887765322 22334566777887665
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
. +..++..+...+++.++.+++..+.....+..
T Consensus 222 ~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~ 254 (497)
T PRK06145 222 H-REFDPEAVLAAIERHRLTCAWMAPVMLSRVLT 254 (497)
T ss_pred C-CcCCHHHHHHHHHHhCCeEEEehHHHHHHHHc
Confidence 5 45678888999999999999988877766543
No 237
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=34.44 E-value=2.7e+02 Score=30.81 Aligned_cols=98 Identities=17% Similarity=0.196 Sum_probs=69.2
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.+|++. .+..+|. .-.+|...+...+..+...+.. .++..+|++...+|..- -.....+.++..|+..+.+
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRS--LGVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEee
Confidence 466777654 3322222 3457888888888777766643 37889999999988763 2233455667888887777
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPR 272 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~ 272 (611)
.. .+..+...++..++.++++...
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEccC
Confidence 65 8889999999999999988654
No 238
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=34.23 E-value=2.8e+02 Score=27.34 Aligned_cols=70 Identities=9% Similarity=0.105 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 37 VLQIVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 37 ~~~lA~~L~~~G-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
+..+-....+.| +++|++| |=...+=--+.+.+.|...|..++.+=|..-..+.+.+|+..++.+++++.
T Consensus 46 A~~mI~~Ae~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 46 ALYMIEDAEKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 444444445556 8899843 333334445666667778888777776666666778899999999999987
No 239
>PRK06060 acyl-CoA synthetase; Validated
Probab=34.19 E-value=3.3e+02 Score=30.70 Aligned_cols=122 Identities=11% Similarity=-0.052 Sum_probs=75.8
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l 82 (611)
||.+|++.-+ -|.+|..+ .+|+..+...+..+.. ...++.++|++...++-.. .+...++..+..|+.++..
T Consensus 144 ~~~~a~il~T--SGSTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~ 219 (705)
T PRK06060 144 GDALAYATYT--SGTTGPPKAAIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVIN 219 (705)
T ss_pred CCCeEEEEEC--CCCCCCCcEEEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEe
Confidence 4566655443 56666654 5677766655443322 2346788888776665432 2234456677889888877
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHHHhccc-cccccCccEEEEecC
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD-CRSAQRLRVMVCFTS 132 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 132 (611)
+.......+..++.+.++.++.........+.... ......++.++.-.+
T Consensus 220 ~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gGe 270 (705)
T PRK06060 220 SAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAGE 270 (705)
T ss_pred CCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEecC
Confidence 66677788888899999999998887766554322 122345555554443
No 240
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=34.17 E-value=78 Score=28.90 Aligned_cols=33 Identities=24% Similarity=0.425 Sum_probs=29.5
Q ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 007257 26 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIY 58 (611)
Q Consensus 26 ~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~ 58 (611)
.-+||.++++.+.++|..+.+.|.+|.-.|++.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 689999999999999999999999998766664
No 241
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=33.81 E-value=2.9e+02 Score=27.16 Aligned_cols=66 Identities=8% Similarity=-0.003 Sum_probs=47.3
Q ss_pred HHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 41 VSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 41 A~~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
.....+.|. .+|+.|+. ...+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 47 v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 47 IVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 334445554 67776655 4555566777778889998777776666566677889999999999875
No 242
>PRK07867 acyl-CoA synthetase; Validated
Probab=33.69 E-value=4e+02 Score=28.73 Aligned_cols=102 Identities=9% Similarity=-0.046 Sum_probs=63.5
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~ 81 (611)
.++.++++.-+ -|.+|..+ .+|+..+...+..+. ...|+.++|++...+|-.-. .+..+++.+..|+.++.
T Consensus 150 ~~~~~~~i~~T--SGTTG~PKgv~~s~~~l~~~~~~~~---~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~ 224 (529)
T PRK07867 150 DPDDLFMLIFT--SGTSGDPKAVRCTHRKVASAGVMLA---QRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIAL 224 (529)
T ss_pred CccceEEEEEC--CCCCCCCcEEEecHHHHHHHHHHHH---HhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEe
Confidence 45666665543 45556544 667777765544433 33378889988877665432 22334445566776554
Q ss_pred CCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 82 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 82 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
. +.++++.+...+++.++.++.........+
T Consensus 225 ~-~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 255 (529)
T PRK07867 225 R-RKFSASGFLPDVRRYGATYANYVGKPLSYV 255 (529)
T ss_pred c-CCCCHHHHHHHHHHhCCeEEeccHHHHHHH
Confidence 3 566788888899999999887666554433
No 243
>PLN02479 acetate-CoA ligase
Probab=33.52 E-value=3.6e+02 Score=29.39 Aligned_cols=85 Identities=11% Similarity=-0.095 Sum_probs=63.7
Q ss_pred eeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEE
Q 007257 190 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 267 (611)
Q Consensus 190 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l 267 (611)
.+|...+...+..+...+... ++..+|++....|-.- -.....+.++..|+..+.++. ....+...+++.++..+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~--g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKR--SIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEE
Confidence 478888888777776666432 6888999988888643 222335566888988888876 78899999999999999
Q ss_pred ecchHHHHHH
Q 007257 268 AGVPRVFEKI 277 (611)
Q Consensus 268 ~~~p~~~~~l 277 (611)
+..+..+...
T Consensus 122 i~~~~~~~~~ 131 (567)
T PLN02479 122 MVDQEFFTLA 131 (567)
T ss_pred EEchhhhhHH
Confidence 9988765443
No 244
>PRK13391 acyl-CoA synthetase; Provisional
Probab=33.30 E-value=2.8e+02 Score=29.57 Aligned_cols=99 Identities=11% Similarity=0.009 Sum_probs=70.0
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.++++...++ -.+|...+...+..+...+... ++..++++....+-...+ +...+.++..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~--g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSL--GLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecc
Confidence 4666776654432 2488888887777776665432 677888888777665322 22355567888888887
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHHHHHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRVFEKI 277 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 277 (611)
+. +...+...++..++..++..+.....+
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 66 788999999999999999988766544
No 245
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.24 E-value=1.9e+02 Score=30.75 Aligned_cols=85 Identities=11% Similarity=-0.082 Sum_probs=63.3
Q ss_pred eeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEE
Q 007257 190 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 267 (611)
Q Consensus 190 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l 267 (611)
.+|...+...+..+...+... +++.++++....+-.. -.....+.++..|+..+..+. ....+...+++.+++.+
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~--g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRAL--GLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHh--CCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 477777777777766655432 6788899888877663 333446667888999888766 77888999999999999
Q ss_pred ecchHHHHHH
Q 007257 268 AGVPRVFEKI 277 (611)
Q Consensus 268 ~~~p~~~~~l 277 (611)
+..+.....+
T Consensus 88 i~~~~~~~~~ 97 (502)
T PRK08276 88 IVSAALADTA 97 (502)
T ss_pred EEccchhhHH
Confidence 9988766554
No 246
>PRK13382 acyl-CoA synthetase; Provisional
Probab=33.05 E-value=3.1e+02 Score=29.63 Aligned_cols=92 Identities=12% Similarity=0.064 Sum_probs=61.8
Q ss_pred cCCCCCceEE--eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 007257 19 DGKFGPYVWK--TYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLYDTLGPGAVNFIL 95 (611)
Q Consensus 19 ~~~~~~~~~~--Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 95 (611)
-|.+|..+-+ |+..+... +...+...++.+++++....|-.-.+ +...++.+..|+.++.. ...+++.+...|
T Consensus 205 SGTTG~PKgv~~s~~~~~~~---~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i 280 (537)
T PRK13382 205 SGTTGTPKGARRSGPGGIGT---LKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTR-RRFDPEATLDLI 280 (537)
T ss_pred CCCCCCCCEEEeccchHHHH---HHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEEC-CCcCHHHHHHHH
Confidence 4666665544 44334333 33344445778899887766654332 23456777788887764 567888999999
Q ss_pred hhcCccEEEEcchhHHHHh
Q 007257 96 DHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 96 ~~~~~~~li~~~~~~~~~~ 114 (611)
++.++.++.........+.
T Consensus 281 ~~~~vt~~~~~P~~~~~l~ 299 (537)
T PRK13382 281 DRHRATGLAVVPVMFDRIM 299 (537)
T ss_pred HHhCCEEEEehHHHHHHHH
Confidence 9999999999888766553
No 247
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=32.83 E-value=3.4e+02 Score=28.93 Aligned_cols=101 Identities=13% Similarity=0.009 Sum_probs=62.2
Q ss_pred CCCCceeeeccccCCCCCceEE-----eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEe
Q 007257 7 PGNRMLGWRPFVDGKFGPYVWK-----TYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICV 80 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~~~-----Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~ 80 (611)
++.++++.-+ .|.+|..+-+ |+..+..... ......|+.+++++...++-... .....+..+..|+..+
T Consensus 151 ~~~~a~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~ 225 (509)
T PRK12406 151 VPQPQSMIYT--SGTTGHPKGVRRAAPTPEQAAAAEQ---MRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLV 225 (509)
T ss_pred CCCceEEEEC--CCCCCCCceEEEechhHHHHHHHHH---hhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEE
Confidence 4556555443 4566655544 3333322222 22234478899988877664322 2233344566788766
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
.. +..+++.+...+++.++.+++..+.....+
T Consensus 226 ~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l 257 (509)
T PRK12406 226 LQ-PRFDPEELLQLIERHRITHMHMVPTMFIRL 257 (509)
T ss_pred Ec-cCCCHHHHHHHHHHcCCeEEEccHHHHHHH
Confidence 55 456788999999999999999888766554
No 248
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=32.56 E-value=3e+02 Score=30.38 Aligned_cols=104 Identities=14% Similarity=0.041 Sum_probs=71.9
Q ss_pred ccCCCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEE
Q 007257 4 QKYPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLIC 79 (611)
Q Consensus 4 ~~~pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~ 79 (611)
...||.+|.+..+ -|.+|.. --+||+-+...+..+...+. -++++|++.-++|-+ .+.+.. .++...|.+.
T Consensus 187 ~~~~dDlatiiYT--SGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~-~~~~~~~g~~ 261 (613)
T COG1022 187 PPKPDDLATIIYT--SGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFE-GGLALYGGVT 261 (613)
T ss_pred CCCccceEEEEEc--CCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHH-HHHHhhcceE
Confidence 4568888877663 4555554 48999999999888887776 378999999999965 233322 4444444444
Q ss_pred eeCCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 80 VPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 80 ~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
+... .+...+..-|...+|.+++.-+-..+.+.
T Consensus 262 ~~~~--~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 262 VLFK--EDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred EEec--CCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 4333 34678888899999999998776555443
No 249
>PRK09088 acyl-CoA synthetase; Validated
Probab=32.31 E-value=2.6e+02 Score=29.65 Aligned_cols=95 Identities=17% Similarity=0.096 Sum_probs=66.1
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.++++....| ..+|...+...+..+...+.. .++..++++....+-... .+...+.++..|+..+.+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~--~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~ 77 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRR--RGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPL 77 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEee
Confidence 3556665432222 357888888877776665542 257788998888776643 233456678889888887
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
+. .+..+...+++.+++.++.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~ 104 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGDDAV 104 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEcchh
Confidence 66 78889999999999999876543
No 250
>PRK10717 cysteine synthase A; Provisional
Probab=32.19 E-value=2.8e+02 Score=27.78 Aligned_cols=66 Identities=14% Similarity=0.080 Sum_probs=46.9
Q ss_pred HHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 42 SALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 42 ~~L~~~G-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
..+.+.| +++|+.|.. ...+-.-..+.++|.++|..+..+-|...++.....++..++++++++..
T Consensus 53 ~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 53 WDAEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 3344455 467776544 55555666777788899987776666666677788999999999998753
No 251
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=31.52 E-value=1.4e+02 Score=31.66 Aligned_cols=74 Identities=24% Similarity=0.209 Sum_probs=0.0
Q ss_pred EEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC-----
Q 007257 176 IMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG----- 250 (611)
Q Consensus 176 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~----- 250 (611)
|+.|||++ ..+...+.. -.+++|.+++-.|-++..-..+-. .|..++-++.
T Consensus 158 IiiT~G~q----------~al~l~~~~----------l~~pGd~v~vE~PtY~~~~~~~~~----~g~~~~~vp~d~~G~ 213 (459)
T COG1167 158 IVITSGAQ----------QALDLLLRL----------LLDPGDTVLVEDPTYPGALQALEA----LGARVIPVPVDEDGI 213 (459)
T ss_pred EEEeCCHH----------HHHHHHHHH----------hCCCCCEEEEcCCCcHHHHHHHHH----cCCcEEecCCCCCCC
Q ss_pred ChHHHHHHHhhhcCeEEecchHH
Q 007257 251 DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 251 ~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
+++.+-+.+++++|..++.+|++
T Consensus 214 ~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 214 DPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CHHHHHHHHhhcCCcEEEECCCC
No 252
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=30.98 E-value=2.9e+02 Score=29.97 Aligned_cols=85 Identities=11% Similarity=0.069 Sum_probs=62.9
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeE
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 266 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 266 (611)
..+|+..+...+..+...+... ++..++++....+-..-+ ....+.++..|+..+.++. .+..+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~--gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSR--GLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 3689999988887777666433 678889988887765322 2334666888999887766 7889999999999999
Q ss_pred EecchHHHHH
Q 007257 267 LAGVPRVFEK 276 (611)
Q Consensus 267 l~~~p~~~~~ 276 (611)
++........
T Consensus 124 vi~~~~~~~~ 133 (557)
T PRK07059 124 IVVLENFATT 133 (557)
T ss_pred EEEchhhHHH
Confidence 9887665443
No 253
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=30.63 E-value=24 Score=17.57 Aligned_cols=10 Identities=60% Similarity=1.072 Sum_probs=7.1
Q ss_pred ccccCCCCCc
Q 007257 365 GYGLTETCGP 374 (611)
Q Consensus 365 ~yG~tE~g~~ 374 (611)
+||+|++.+-
T Consensus 1 GYGSTqTA~~ 10 (16)
T PF00818_consen 1 GYGSTQTAGE 10 (16)
T ss_pred CCCcccccCC
Confidence 5888887653
No 254
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=30.32 E-value=3.4e+02 Score=26.07 Aligned_cols=71 Identities=15% Similarity=0.093 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHHHHhc------C--CEEeeCCCCC---ChhHHHHHHhhcCccEE
Q 007257 36 EVLQIVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNAL------S--LICVPLYDTL---GPGAVNFILDHAEIDFV 103 (611)
Q Consensus 36 ~~~~lA~~L~~~G-v~~gd~V~i~~~n~~~~~~~~lA~~~~------G--~~~~~l~~~~---~~~~l~~~l~~~~~~~l 103 (611)
...++...+.+.+ +.+|++|++..+-+.|+++++..+..+ + ..++.++... ..+.+..+.++.+..+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3455566677765 578999999999999998887776442 2 3455566543 33345566677777766
Q ss_pred EEc
Q 007257 104 FVQ 106 (611)
Q Consensus 104 i~~ 106 (611)
+.+
T Consensus 92 v~~ 94 (258)
T PRK10696 92 IEE 94 (258)
T ss_pred EEE
Confidence 654
No 255
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=30.25 E-value=1e+02 Score=29.16 Aligned_cols=52 Identities=15% Similarity=0.118 Sum_probs=31.1
Q ss_pred CceEEEccCCeEEEEeccCCeEEcCCce--ecCcHHHHHHHhcCcCcceEEEEecCCCC
Q 007257 449 GDIGQILPNGVVKIIDRKKNLIKISQGE--YVALEYLENVYCVAPIIEDIWVYGDSLKS 505 (611)
Q Consensus 449 GD~~~~~~dG~l~~~GR~~d~i~~~~G~--~v~~~~iE~~l~~~p~V~~~~v~~~~~~~ 505 (611)
|.+.+.++||++.+.|.. +.+.++. ++.-..++..+...| .+.++++.++.+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~~k 108 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQEK 108 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCCCC
Confidence 457888999999999975 4432222 333222344455555 457788766444
No 256
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=29.40 E-value=2.2e+02 Score=30.82 Aligned_cols=99 Identities=9% Similarity=0.061 Sum_probs=69.0
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.++++.... | ..+|+..+...+..+...+... ++..++++...+|-..-+ ....+.++..|+..+.+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~--g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl 110 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSL--GLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGA 110 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccC
Confidence 356666553221 2 3588898888877776666432 677889888887665422 23355667889988777
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHHHHHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRVFEKI 277 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 277 (611)
+. ....+...++..++..++..+..+..+
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 141 (546)
T PLN02330 111 NPTALESEIKKQAEAAGAKLIVTNDTNYGKV 141 (546)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEccchhhhH
Confidence 65 778899999999999998887766544
No 257
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=29.01 E-value=7.1e+02 Score=26.26 Aligned_cols=121 Identities=10% Similarity=-0.085 Sum_probs=75.2
Q ss_pred CCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEeeCC
Q 007257 7 PGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLY 83 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~ 83 (611)
++.++++.-+ .|.+|.. ..+|+..+...+...+.. .++..++++....|-+... +..+++.+..|...+.++
T Consensus 142 ~~~~~~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~ 216 (503)
T PRK04813 142 GDDNYYIIFT--SGTTGKPKGVQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALP 216 (503)
T ss_pred CCCcEEEEEC--CCCCCCCcEEEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcC
Confidence 3444444332 4555543 477888887766555443 4677888887777665432 345567788999888776
Q ss_pred CC--CChhHHHHHHhhcCccEEEEcchhHHHHhcc---ccccccCccEEEEecC
Q 007257 84 DT--LGPGAVNFILDHAEIDFVFVQDKKVKELLSP---DCRSAQRLRVMVCFTS 132 (611)
Q Consensus 84 ~~--~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~---~~~~~~~~~~i~~~~~ 132 (611)
.. .....+...+.+.++..+............. .....+.++.++....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~ 270 (503)
T PRK04813 217 KDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGE 270 (503)
T ss_pred hhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecC
Confidence 53 3567778888999999988887665443221 1223345566655443
No 258
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=28.54 E-value=2.8e+02 Score=31.03 Aligned_cols=87 Identities=10% Similarity=-0.082 Sum_probs=65.0
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeE
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 266 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 266 (611)
..+|...+...+..+...+.. .++..+|++...++-+.- .....+.++..|+..+.+.. .+..+...+++.++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRS--RGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 458888888888777766643 268899999888886632 23345567888988887766 7899999999999999
Q ss_pred EecchHHHHHHH
Q 007257 267 LAGVPRVFEKIH 278 (611)
Q Consensus 267 l~~~p~~~~~l~ 278 (611)
++.....+..+.
T Consensus 153 v~~~~~~~~~~~ 164 (660)
T PLN02861 153 AFVQESKISSIL 164 (660)
T ss_pred EEECHHHHHHHH
Confidence 998776555443
No 259
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=28.39 E-value=3.3e+02 Score=28.79 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=48.2
Q ss_pred HHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 39 QIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 39 ~lA~~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
.+-..+.+.|. .+|+.|.-. ..+-.-..+.++|.++|..+..+-|...+.+....++..++++++++.
T Consensus 48 ~~l~~a~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 48 RMIEDAEASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HHHHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 33444445564 677765444 555566777888999999777776665556677889999999999874
No 260
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.14 E-value=5.2e+02 Score=25.86 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=49.2
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcchh
Q 007257 44 LRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK 109 (611)
Q Consensus 44 L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~ 109 (611)
|...|+.||.+|+|..--+.-.+...+|.+ .|.-+.-++... ..-...++..++++.+...+.
T Consensus 174 Lk~~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d 236 (360)
T KOG0023|consen 174 LKRSGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTSS--KKKEEAIKSLGADVFVDSTED 236 (360)
T ss_pred hHHcCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCCc--hhHHHHHHhcCcceeEEecCC
Confidence 777899999999999998999999999985 566666676653 233457889999988776533
No 261
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=27.81 E-value=6.1e+02 Score=27.89 Aligned_cols=103 Identities=15% Similarity=0.030 Sum_probs=70.9
Q ss_pred CCCCeEEEEEe--cCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEE
Q 007257 169 QPFNICTIMYT--SGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVG 246 (611)
Q Consensus 169 ~~~~~a~i~~T--SGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~ 246 (611)
.++.++++... .+++|. ...+|...+...+..+...+.. .+..+|++...++-..- .+...+.++..|+..+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~---~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~v 120 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQ---VAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAV 120 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHH---hcCCCCEEEEECCCChh-HHHHHHHHHHcCceeE
Confidence 35667765532 112332 3458999888888887777643 26789999888887742 2334556688888877
Q ss_pred Ee-cC--C--hHHHHHHHhhhcCeEEecchHHHHHH
Q 007257 247 YY-HG--D--LNALRDDLMELKPTLLAGVPRVFEKI 277 (611)
Q Consensus 247 ~~-~~--~--~~~~~~~i~~~~~t~l~~~p~~~~~l 277 (611)
.+ +. . +..+...++..++..++..+.....+
T Consensus 121 pl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 121 PLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred ecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 65 33 2 67899999999999999987766544
No 262
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=27.69 E-value=4.2e+02 Score=25.02 Aligned_cols=67 Identities=12% Similarity=0.044 Sum_probs=45.4
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 41 VSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 41 A~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
...+.+.|..+++.|...+ .+-.-..+.++|...|..+..+-|...+.....+++..+++++.++..
T Consensus 39 l~~a~~~g~~~~~~vv~~s-sGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 39 ILLAEEEGKLPKGVIIEST-GGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHHHHcCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3344445433455555543 355556677778889987777666666677778899999999998875
No 263
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=27.30 E-value=4.6e+02 Score=28.12 Aligned_cols=95 Identities=7% Similarity=-0.101 Sum_probs=61.4
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCC-CCCEEEEEcCCchh-HHHHHHHHHhcCCEEee
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAE-PGCRVGIYGANCPQ-WVEAMEACNALSLICVP 81 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~-~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~~~ 81 (611)
.|+.+|++.-+ -|.+|..+ .+|+..+...+..++.. .++. ++|++...+|-.-. .+..+++.+..|+.++.
T Consensus 150 ~~~d~a~i~~T--SGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~ 224 (525)
T PRK05851 150 DSGGPAVLQGT--AGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWL 224 (525)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEE
Confidence 34566665542 45555544 67888877666655433 3677 88988887776533 23456778888998877
Q ss_pred CCC-CC--ChhHHHHHHhhcCccEEEE
Q 007257 82 LYD-TL--GPGAVNFILDHAEIDFVFV 105 (611)
Q Consensus 82 l~~-~~--~~~~l~~~l~~~~~~~li~ 105 (611)
.++ .+ .+..+..++.+.++.++.+
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 225 APTTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred cCHHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 653 22 3556778888888886644
No 264
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=27.22 E-value=3.9e+02 Score=28.90 Aligned_cols=106 Identities=14% Similarity=0.036 Sum_probs=63.1
Q ss_pred CCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchh---HHHHHHHHHhcCCEEe
Q 007257 7 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASG-AEPGCRVGIYGANCPQ---WVEAMEACNALSLICV 80 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~G-v~~gd~V~i~~~n~~~---~~~~~lA~~~~G~~~~ 80 (611)
+|.++++.-+ .|.+|..+ .+|+..+...+.....++.-.+ +.+++.+.+...+... +....+..+..|...+
T Consensus 207 ~~~~~~i~~T--SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 284 (560)
T PRK08751 207 PDDIAFLQYT--GGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNH 284 (560)
T ss_pred cccEEEEEcC--CCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEE
Confidence 4556655442 45555544 5678888777776666654333 6677666554332222 1122344455666555
Q ss_pred eCCCCCChhHHHHHHhhcCccEEEEcchhHHHHh
Q 007257 81 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 81 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 114 (611)
.+........+...+++.++.++.........+.
T Consensus 285 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 318 (560)
T PRK08751 285 LISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLL 318 (560)
T ss_pred EecCcCCHHHHHHHHHhcceeEecChHHHHHHHH
Confidence 5544456778888899999998887766655443
No 265
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=27.19 E-value=4e+02 Score=22.76 Aligned_cols=46 Identities=15% Similarity=0.073 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHh-hcCceEEEecC--ChHHHHHHHhhhcCeEEecchHH
Q 007257 228 HILDRVIEEYFF-RRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 228 ~~~g~~~~~~~l-~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
|..|.......+ ..|-.++.... +++.+++.+.++++..+..+.-+
T Consensus 14 HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~ 62 (134)
T TIGR01501 14 HAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY 62 (134)
T ss_pred hhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 667765544443 45667766655 89999999999999988776543
No 266
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=27.13 E-value=1.5e+02 Score=24.22 Aligned_cols=53 Identities=17% Similarity=0.135 Sum_probs=39.0
Q ss_pred eEEeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 26 VWKTYKEVYEE------VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 26 ~~~Ty~ql~~~------~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
..+.+.++... -..+...+...|+.+++.|.+++..+.....+.+.+..+|..
T Consensus 46 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 46 VNIPWTSLLDEDGTFKSPEELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred cccChHHhcCCCCCcCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35566665431 245666777889999999999999888877777778888863
No 267
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=27.10 E-value=4e+02 Score=22.77 Aligned_cols=43 Identities=9% Similarity=-0.103 Sum_probs=37.7
Q ss_pred HHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 65 WVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 65 ~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
..+....+-..|.-++.+-.+.+.+++...+.+.+|+++..+.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 4556666778999999999999999999999999999998875
No 268
>PRK07868 acyl-CoA synthetase; Validated
Probab=26.71 E-value=7.7e+02 Score=29.29 Aligned_cols=104 Identities=9% Similarity=-0.095 Sum_probs=62.8
Q ss_pred CCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH--HHHHHHHHhcCCEEeeCCC
Q 007257 7 PGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW--VEAMEACNALSLICVPLYD 84 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~~~l~~ 84 (611)
||.+|++.-+ ..+..++.+-+|.......+. ......++.++|++...+|-+-.+ ...+++++..|.. +.+.+
T Consensus 605 ~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~---~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~-vvl~~ 679 (994)
T PRK07868 605 ARDLAFIAFS-TAGGELVAKQITNYRWALSAF---GTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR-IALSR 679 (994)
T ss_pred CCccEEEEEe-CCCCCcCcEEEehHHHHHHHH---hhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE-EEecC
Confidence 3556665541 012234445666433221111 111234788999988888765432 2334455555554 44556
Q ss_pred CCChhHHHHHHhhcCccEEEEcchhHHHHhc
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKKVKELLS 115 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~ 115 (611)
.++++.+...+++.++.++.........+..
T Consensus 680 ~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 680 GLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 7889999999999999999988877766544
No 269
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=26.60 E-value=6e+02 Score=28.42 Aligned_cols=102 Identities=10% Similarity=-0.122 Sum_probs=68.3
Q ss_pred CCCeEEEEEe--cCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEE
Q 007257 170 PFNICTIMYT--SGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGY 247 (611)
Q Consensus 170 ~~~~a~i~~T--SGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~ 247 (611)
|+.+++.... .|..|. -..+|...+...+..+...+.. .++..+|++...++-..-. ....+.++..|+..+.
T Consensus 56 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vp 130 (660)
T PLN02430 56 PDNKMLGWRRIVDGKVGP--YMWKTYKEVYEEVLQIGSALRA--SGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVP 130 (660)
T ss_pred CCCceEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEE
Confidence 4556654332 233332 1346888888877777665543 2788899988888765322 2234556778888777
Q ss_pred ecC--ChHHHHHHHhhhcCeEEecchHHHHH
Q 007257 248 YHG--DLNALRDDLMELKPTLLAGVPRVFEK 276 (611)
Q Consensus 248 ~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~ 276 (611)
+.. .++.+...++..++++++.....+..
T Consensus 131 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~ 161 (660)
T PLN02430 131 LYDTLGPGAVDYIVDHAEIDFVFVQDKKIKE 161 (660)
T ss_pred eccCCCHHHHHHHHhccCCCEEEECHHHHHH
Confidence 655 88999999999999999987754433
No 270
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=26.60 E-value=3.7e+02 Score=29.00 Aligned_cols=94 Identities=13% Similarity=-0.027 Sum_probs=59.6
Q ss_pred cCCCCCce--EEeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEeeCCCCCChhHHHHH
Q 007257 19 DGKFGPYV--WKTYKEVYEEVLQIVS-ALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLYDTLGPGAVNFI 94 (611)
Q Consensus 19 ~~~~~~~~--~~Ty~ql~~~~~~lA~-~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~~~~~~~~l~~~ 94 (611)
.|.+|..+ .+|..... ...... .....+++.+|++....|-.-.+ ....+.++..|+.++........+.+...
T Consensus 186 SGTTG~PKgv~~s~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 263 (542)
T PRK06018 186 SGTTGDPKGVLYSHRSNV--LHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYEL 263 (542)
T ss_pred CCCCCCCcEEEEechhHH--HHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHH
Confidence 45666555 55655431 111222 22334788999888776643221 22345667888887765556677888899
Q ss_pred HhhcCccEEEEcchhHHHHh
Q 007257 95 LDHAEIDFVFVQDKKVKELL 114 (611)
Q Consensus 95 l~~~~~~~li~~~~~~~~~~ 114 (611)
+++.++.++.........+.
T Consensus 264 l~~~~~t~~~~~p~~~~~l~ 283 (542)
T PRK06018 264 LDTEKVTFTAGVPTVWLMLL 283 (542)
T ss_pred HHhcCCceeecCcHHHHHHH
Confidence 99999999998887765553
No 271
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=26.10 E-value=5.4e+02 Score=24.96 Aligned_cols=95 Identities=19% Similarity=0.188 Sum_probs=66.6
Q ss_pred cCCCCCceeeeccccCCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC
Q 007257 5 KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 84 (611)
Q Consensus 5 ~~pd~~a~~~~~~~~~~~~~~~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~ 84 (611)
+-|+.-.+... |...-+|-..|=.++.+++.++..+|.++++ .+.++.-|+.-.+++-.-=.+....++.+-|
T Consensus 27 ~LP~e~~iY~~---D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~i----k~lVIACNTASa~al~~LR~~~~iPVvGviP 99 (269)
T COG0796 27 QLPDEDIIYVG---DTARFPYGEKSEEEIRERTLEIVDFLLERGI----KALVIACNTASAVALEDLREKFDIPVVGVIP 99 (269)
T ss_pred HCCCCcEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHcCC----CEEEEecchHHHHHHHHHHHhCCCCEEEecc
Confidence 45777777777 7778888889999999999999999999986 4888888888776665555555666666556
Q ss_pred CCChhHHHHHHhhcCccEEEEcchh
Q 007257 85 TLGPGAVNFILDHAEIDFVFVQDKK 109 (611)
Q Consensus 85 ~~~~~~l~~~l~~~~~~~li~~~~~ 109 (611)
...+.. ...+.+--.++.+...
T Consensus 100 aik~A~---~~t~~~~IgViaT~~T 121 (269)
T COG0796 100 AIKPAV---ALTRNGRIGVIATPAT 121 (269)
T ss_pred chHHHH---HhccCCeEEEEeccch
Confidence 654432 2333344445555443
No 272
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=25.71 E-value=4.5e+02 Score=28.56 Aligned_cols=104 Identities=13% Similarity=-0.025 Sum_probs=64.2
Q ss_pred CCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcC------CCCCCEEEEE-cCCc--hhHHHHHHHHHhcC
Q 007257 8 GNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASG------AEPGCRVGIY-GANC--PQWVEAMEACNALS 76 (611)
Q Consensus 8 d~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~G------v~~gd~V~i~-~~n~--~~~~~~~lA~~~~G 76 (611)
+.+|++.-+ .|.+|..+ .+|+..+...+..+...+...+ +..++.+.+. .|-. ..+....+.++..|
T Consensus 207 ~~~a~i~~T--SGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g 284 (562)
T PRK12492 207 DDIAVLQYT--GGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSG 284 (562)
T ss_pred CCeEEEEeC--CCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcC
Confidence 445554442 45566544 6788888877777777765433 4566655443 2221 22233455666778
Q ss_pred CEEeeCCCCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 77 LICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 77 ~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
...+..........+...+++.++.+++........+
T Consensus 285 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 321 (562)
T PRK12492 285 NHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVAL 321 (562)
T ss_pred ceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHH
Confidence 7666554445667777889999999988777665544
No 273
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=25.57 E-value=4.8e+02 Score=27.15 Aligned_cols=83 Identities=14% Similarity=-0.029 Sum_probs=58.3
Q ss_pred eEEeHHHHHHHHH-HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC--CCCCChhHHHHHHhhcCccE
Q 007257 26 VWKTYKEVYEEVL-QIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL--YDTLGPGAVNFILDHAEIDF 102 (611)
Q Consensus 26 ~~~Ty~ql~~~~~-~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l--~~~~~~~~l~~~l~~~~~~~ 102 (611)
+.+.|++-+.-+- .+...+.+..-=+|-+|+.+++-.++..+.+..+..+|+-+... ||..+.++....|...+..+
T Consensus 5 ~~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v 84 (406)
T TIGR00936 5 KKIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPV 84 (406)
T ss_pred HHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceE
Confidence 3444554333222 22333333334479999999999999999999999999976654 78888889999999888886
Q ss_pred EEEcch
Q 007257 103 VFVQDK 108 (611)
Q Consensus 103 li~~~~ 108 (611)
.-....
T Consensus 85 ~a~~~~ 90 (406)
T TIGR00936 85 FAWRGE 90 (406)
T ss_pred EEecCC
Confidence 654433
No 274
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=25.48 E-value=81 Score=23.30 Aligned_cols=20 Identities=40% Similarity=0.461 Sum_probs=15.7
Q ss_pred HHHHHHHHcCCCCCCEEEEE
Q 007257 39 QIVSALRASGAEPGCRVGIY 58 (611)
Q Consensus 39 ~lA~~L~~~Gv~~gd~V~i~ 58 (611)
.+-..|++.|+++||.|-|.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEc
Confidence 35556788899999999874
No 275
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.41 E-value=4.2e+02 Score=28.76 Aligned_cols=86 Identities=14% Similarity=0.075 Sum_probs=62.5
Q ss_pred eeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEE
Q 007257 190 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 267 (611)
Q Consensus 190 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l 267 (611)
.+|+..+...+..+...+.. ..++..++++...+|-..-+ ....+.++..|+..+.++. ....+...+++.++..+
T Consensus 49 ~~Ty~el~~~~~~la~~L~~-~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQ-HTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 57888888887777665521 01678899998888765322 2335566888988888766 78899999999999999
Q ss_pred ecchHHHHHH
Q 007257 268 AGVPRVFEKI 277 (611)
Q Consensus 268 ~~~p~~~~~l 277 (611)
+........+
T Consensus 127 i~~~~~~~~~ 136 (562)
T PRK05677 127 VCLANMAHLA 136 (562)
T ss_pred EEecchhhhH
Confidence 9876655433
No 276
>PRK12582 acyl-CoA synthetase; Provisional
Probab=25.26 E-value=3e+02 Score=30.49 Aligned_cols=80 Identities=10% Similarity=-0.000 Sum_probs=58.7
Q ss_pred eeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--C-----hHHHHHHHhh
Q 007257 189 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--D-----LNALRDDLME 261 (611)
Q Consensus 189 v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~-----~~~~~~~i~~ 261 (611)
-.+|+..+...+..+...+.. .++..+|++...++-. .-.....+.++..|+..+.+.. . ...+...++.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLD--LGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHh
Confidence 468888888887777666533 3678899998888844 2333445567888998887765 2 3788999999
Q ss_pred hcCeEEecch
Q 007257 262 LKPTLLAGVP 271 (611)
Q Consensus 262 ~~~t~l~~~p 271 (611)
.++..++...
T Consensus 156 ~~~~~vi~~~ 165 (624)
T PRK12582 156 VKPRVVFAQS 165 (624)
T ss_pred cCCcEEEecC
Confidence 9999888764
No 277
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=25.25 E-value=3.2e+02 Score=26.86 Aligned_cols=65 Identities=15% Similarity=0.083 Sum_probs=50.8
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC-CCCCChhHHHHHHhhcCccEEEEcchhHHH
Q 007257 48 GAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL-YDTLGPGAVNFILDHAEIDFVFVQDKKVKE 112 (611)
Q Consensus 48 Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l-~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 112 (611)
.+++||.|.=-..||.---+.+--|-..|...+.+ -.+-.-+++...|...+|+.+|++++....
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 67899998888888866655666666778765544 566678899999999999999998876543
No 278
>PRK10595 SOS cell division inhibitor; Provisional
Probab=25.02 E-value=2.5e+02 Score=24.96 Aligned_cols=36 Identities=25% Similarity=0.047 Sum_probs=19.6
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCC
Q 007257 42 SALRASGAEPGCRVGIYGANCPQWVEAMEACNALSL 77 (611)
Q Consensus 42 ~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 77 (611)
.+|.+.|+..+..+.|...+..|.+.++-=|++.|.
T Consensus 71 ~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~ 106 (164)
T PRK10595 71 EWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGN 106 (164)
T ss_pred HHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCC
Confidence 345555665544444444455566666666666654
No 279
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=24.75 E-value=92 Score=22.99 Aligned_cols=29 Identities=28% Similarity=0.268 Sum_probs=17.3
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 007257 29 TYKEVYEEVLQIVSALRASGAEPGCRVGI 57 (611)
Q Consensus 29 Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i 57 (611)
.|-+-.-+...+-..|++.|+++||.|-|
T Consensus 34 ~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 34 RRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 33343444555667788889999999876
No 280
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=24.55 E-value=1.3e+02 Score=29.32 Aligned_cols=53 Identities=8% Similarity=-0.045 Sum_probs=43.2
Q ss_pred eEEeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 26 VWKTYKEVYE-----EVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 26 ~~~Ty~ql~~-----~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
..+.|.++.. ....+...|.+.|+.+++.|.+++.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4566777653 2466777788889999999999999999999999999889875
No 281
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=24.49 E-value=3.1e+02 Score=28.10 Aligned_cols=60 Identities=17% Similarity=0.017 Sum_probs=30.2
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCC-----CCChhHHHHHHhh---cCccEEE
Q 007257 42 SALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD-----TLGPGAVNFILDH---AEIDFVF 104 (611)
Q Consensus 42 ~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~---~~~~~li 104 (611)
..+...++++||.|.+-.+. +....-++...|+.++.++. ....+.+...++. -++++++
T Consensus 59 ~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 59 IACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 33444456677765554433 23333445566765555432 1345566666653 2444444
No 282
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=24.46 E-value=3.4e+02 Score=28.57 Aligned_cols=67 Identities=13% Similarity=0.046 Sum_probs=39.1
Q ss_pred HHHHHHHHHHc-CCCCCCEEEEEcCCchhHHH-HHHHHHhcCCEEeeCCCCCC--hhHHHHHHhhcCccEEEEcc
Q 007257 37 VLQIVSALRAS-GAEPGCRVGIYGANCPQWVE-AMEACNALSLICVPLYDTLG--PGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 37 ~~~lA~~L~~~-Gv~~gd~V~i~~~n~~~~~~-~~lA~~~~G~~~~~l~~~~~--~~~l~~~l~~~~~~~li~~~ 107 (611)
+..+...|.+. |- .. ++..+++-..+. +++++.+.|-.++..++.+. ..-+...+...++++.+++.
T Consensus 63 v~~lE~~la~leg~---~~-av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEGG---VG-AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhCC---Cc-EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 45555555554 22 22 455666655444 45567777876666555553 33344557788888888875
No 283
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=24.45 E-value=1.2e+02 Score=22.95 Aligned_cols=40 Identities=15% Similarity=0.031 Sum_probs=33.5
Q ss_pred HHHHHHc-CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEe
Q 007257 41 VSALRAS-GAEPGCRVGIYGANCPQWVEAMEACNALSLICV 80 (611)
Q Consensus 41 A~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~ 80 (611)
..+|.+. |+..|+.++.+..+-.|.+..+=|.+++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 3567766 999999999999999999999999998875543
No 284
>KOG0330 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=24.43 E-value=3.1e+02 Score=28.08 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcC---ccEEEEcchhHHHHhccccccccCccEE
Q 007257 51 PGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAE---IDFVFVQDKKVKELLSPDCRSAQRLRVM 127 (611)
Q Consensus 51 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~---~~~li~~~~~~~~~~~~~~~~~~~~~~i 127 (611)
.|..+.|++..|...-.+.+.+..+|...+|++-+++...--..++..+ .++++|.+-...-+ ..+....+
T Consensus 299 ~g~s~iVF~~t~~tt~~la~~L~~lg~~a~~LhGqmsq~~Rlg~l~~Fk~~~r~iLv~TDVaSRGL------Dip~Vd~V 372 (476)
T KOG0330|consen 299 AGNSVIVFCNTCNTTRFLALLLRNLGFQAIPLHGQMSQSKRLGALNKFKAGARSILVCTDVASRGL------DIPHVDVV 372 (476)
T ss_pred cCCcEEEEEeccchHHHHHHHHHhcCcceecccchhhHHHHHHHHHHHhccCCcEEEecchhcccC------CCCCceEE
Confidence 4567889988888888888889999999999999999887666666655 56777776322211 33555566
Q ss_pred EEecC
Q 007257 128 VCFTS 132 (611)
Q Consensus 128 ~~~~~ 132 (611)
++.+-
T Consensus 373 VNyDi 377 (476)
T KOG0330|consen 373 VNYDI 377 (476)
T ss_pred EecCC
Confidence 65553
No 285
>PRK13390 acyl-CoA synthetase; Provisional
Probab=24.33 E-value=4.8e+02 Score=27.70 Aligned_cols=95 Identities=11% Similarity=0.020 Sum_probs=66.5
Q ss_pred CCCCeEEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEe
Q 007257 169 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 248 (611)
Q Consensus 169 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 248 (611)
.|+.++++... +| -.+|...+...+..+...+.. .++..+|++....+-... .+...+.++..|+..+.+
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~--~gv~~gd~V~i~~~n~~~-~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYD--AGLRTGDVVALLSDNSPE-ALVVLWAALRSGLYITAI 79 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEecc
Confidence 45666665422 22 358999888888877776643 267889998887776542 233455668889888877
Q ss_pred cC--ChHHHHHHHhhhcCeEEecchHH
Q 007257 249 HG--DLNALRDDLMELKPTLLAGVPRV 273 (611)
Q Consensus 249 ~~--~~~~~~~~i~~~~~t~l~~~p~~ 273 (611)
.. .+..+...++..++..+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~ 106 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAAL 106 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchh
Confidence 66 78888899999999988876543
No 286
>PRK08162 acyl-CoA synthetase; Validated
Probab=24.29 E-value=2.7e+02 Score=29.98 Aligned_cols=85 Identities=13% Similarity=-0.057 Sum_probs=64.6
Q ss_pred eeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--ChHHHHHHHhhhcCeEE
Q 007257 190 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 267 (611)
Q Consensus 190 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~l 267 (611)
.+|...+...+..+...+.. .++..++++....|-..- .....+.++..|+..+.++. ....+...++..+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~--~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALAR--RGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 58999888888777766643 267889999888776642 22335556788888887766 78999999999999999
Q ss_pred ecchHHHHHH
Q 007257 268 AGVPRVFEKI 277 (611)
Q Consensus 268 ~~~p~~~~~l 277 (611)
+..+..+..+
T Consensus 120 ~~~~~~~~~~ 129 (545)
T PRK08162 120 IVDTEFAEVA 129 (545)
T ss_pred EEccchhhHH
Confidence 9988776654
No 287
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=24.02 E-value=2.8e+02 Score=28.50 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=14.6
Q ss_pred HHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 45 RASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 45 ~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
...++++||.|.+-.+. +.....++...|+.++.+
T Consensus 66 ~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~v 100 (379)
T PRK11658 66 MALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMV 100 (379)
T ss_pred HHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEE
Confidence 33345555554443222 222223334455554444
No 288
>PRK07476 eutB threonine dehydratase; Provisional
Probab=23.83 E-value=3.9e+02 Score=26.73 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=42.9
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 44 LRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 44 L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
+.+.|..+| | +....+=.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 61 a~~~~~~~g--v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 61 LSAQERARG--V-VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred hhhhhhCCe--E-EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 334454433 3 3334445566777788899987777666666677788899999999999864
No 289
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=23.21 E-value=4e+02 Score=28.84 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=68.5
Q ss_pred EEEEEecCCCCCCceeeeccHhHHHhhhhcccccccccCCCCCCcEEEEecchhhHHHHHHHHHHhhcCceEEEecC--C
Q 007257 174 CTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--D 251 (611)
Q Consensus 174 a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~ 251 (611)
..+++-+-.++. -.+|.+.|...+..+...+... .+. .+|+++..+|...-. ...++.++..|+....+.. .
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~-~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f~ 100 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDL-GGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGLS 100 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHh-CCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCCC
Confidence 445555555444 5688888888877777666321 135 899999999987432 2345556777766544433 9
Q ss_pred hHHHHHHHhhhcCeEEecchHHHHHH
Q 007257 252 LNALRDDLMELKPTLLAGVPRVFEKI 277 (611)
Q Consensus 252 ~~~~~~~i~~~~~t~l~~~p~~~~~l 277 (611)
+..+..-+.+..+.++++....+...
T Consensus 101 ~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 101 AEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred HHHHHHHHHccCCCEEEEeccccccc
Confidence 99999999999999999887777643
No 290
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=23.14 E-value=61 Score=21.67 Aligned_cols=26 Identities=31% Similarity=0.434 Sum_probs=21.5
Q ss_pred eEEEEecCCCCHHHHHHHHHHcCCce
Q 007257 337 RLVISGGAPLSTEVEEFLRVTCCAFL 362 (611)
Q Consensus 337 ~~i~~~G~~l~~~~~~~~~~~~~~~v 362 (611)
+.+.++|.|++.++...++..+|-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 55788999999999999988876543
No 291
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=23.01 E-value=2.2e+02 Score=28.42 Aligned_cols=64 Identities=14% Similarity=-0.001 Sum_probs=46.5
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 44 LRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 44 L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
+.+.|..+++.|...+ .+-.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 43 a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 43 SAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3444544566665544 455556777888899998877777766777788999999999998765
No 292
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=23.00 E-value=5.3e+02 Score=25.23 Aligned_cols=66 Identities=8% Similarity=0.048 Sum_probs=46.8
Q ss_pred HHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcchh
Q 007257 43 ALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK 109 (611)
Q Consensus 43 ~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~ 109 (611)
.+.+.|. .+|+.|+. ...+-.-..+.++|.++|..+..+-|...+......++..++++++++...
T Consensus 43 ~a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 43 DAEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3445553 35666544 555666677778888999877776666555667788999999999998653
No 293
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=22.98 E-value=2e+02 Score=22.79 Aligned_cols=53 Identities=8% Similarity=-0.045 Sum_probs=39.5
Q ss_pred eEEeHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 26 VWKTYKEVYEE----VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 26 ~~~Ty~ql~~~----~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
..+.+.++... ...+...+...++.+++.|.+++.++.....+...+...|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 56677776543 235666676778888999999999988877777888888864
No 294
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=22.69 E-value=6.4e+02 Score=23.64 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHh-hcCceEEEecC--ChHHHHHHHhhhcCeEEecchHHHHHHH
Q 007257 228 HILDRVIEEYFF-RRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIH 278 (611)
Q Consensus 228 ~~~g~~~~~~~l-~~G~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 278 (611)
|..|....-..+ ..|--++=... .++.+....+++|++.+.++..+=..+.
T Consensus 117 HdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~ 170 (227)
T COG5012 117 HDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMI 170 (227)
T ss_pred HHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHH
Confidence 667765544333 33545544444 8899999999999999988776554443
No 295
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=22.37 E-value=2.9e+02 Score=29.08 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=14.5
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeC
Q 007257 48 GAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 82 (611)
Q Consensus 48 Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 82 (611)
++++||.|.+-.+.. .....++...|+.++++
T Consensus 107 ~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~v 138 (438)
T PRK15407 107 ALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFV 138 (438)
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEE
Confidence 555666554433222 22333444455555444
No 296
>PRK06381 threonine synthase; Validated
Probab=22.25 E-value=2.6e+02 Score=27.84 Aligned_cols=66 Identities=11% Similarity=0.008 Sum_probs=45.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 39 QIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 39 ~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
.+...+.+.|. ++| +....+-.-..+.++|...|..+..+-|...+......++..+++++++...
T Consensus 53 ~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 53 AHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK 118 (319)
T ss_pred HHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 33334455553 344 3455566667778888999987776655555566667899999999999865
No 297
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=22.12 E-value=1.7e+02 Score=29.39 Aligned_cols=53 Identities=4% Similarity=-0.035 Sum_probs=42.2
Q ss_pred eEEeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 007257 26 VWKTYKEVYEE------VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 78 (611)
Q Consensus 26 ~~~Ty~ql~~~------~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 78 (611)
..+.|.++... ...+...+.+.|+.+++.|.+++..+.....+++++..+|..
T Consensus 237 vnip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 237 KCVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred cccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35667665432 466777788889999999999999999988899999899874
No 298
>PLN02356 phosphateglycerate kinase
Probab=21.78 E-value=5.1e+02 Score=27.13 Aligned_cols=70 Identities=17% Similarity=0.115 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 37 VLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 37 ~~~lA~~L~~~Gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
+..+-..+.+.|. ++|..|+ ....+-.-..+.++|...|..+..+-|...+.+-..+++..++++++++.
T Consensus 88 A~~~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 88 AVKIIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHHHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 3334444455554 3776554 34444457778888889998777766666666667899999999999853
No 299
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.50 E-value=2.9e+02 Score=22.61 Aligned_cols=43 Identities=9% Similarity=-0.006 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcch
Q 007257 66 VEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 108 (611)
Q Consensus 66 ~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~ 108 (611)
.++...+-..|.-++.+.+..+.+++...+.+.+|+++..+..
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3444445568999999999999999999999999999888753
No 300
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=21.34 E-value=1.7e+02 Score=22.36 Aligned_cols=70 Identities=17% Similarity=0.328 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcchhH
Q 007257 31 KEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV 110 (611)
Q Consensus 31 ~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~ 110 (611)
.++.+.++..++.|+.-|+.|+ |.++.|.-.+++.. -.+-.+|..+ +.+++.+.+++++|...+
T Consensus 8 i~il~~ie~~inELk~dG~ePD--ivL~G~ef~e~~~~-~~l~~~~lkv-------------y~i~ELg~DAVvaDSk~L 71 (85)
T PF08967_consen 8 IRILELIEEKINELKEDGFEPD--IVLVGPEFYEFLSE-EVLEVSGLKV-------------YVIEELGSDAVVADSKYL 71 (85)
T ss_dssp HHHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH----EETTEEE-------------EE-GGGTTEEEEE-TTTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCC--EEEEcHHHHHHHHH-HHHHhhCceE-------------EEHHhcCCceEEEchHHh
Confidence 4567788999999999999886 77887777776544 0011122221 246888999999999887
Q ss_pred HHHhcc
Q 007257 111 KELLSP 116 (611)
Q Consensus 111 ~~~~~~ 116 (611)
.....+
T Consensus 72 G~~~~a 77 (85)
T PF08967_consen 72 GQLKKA 77 (85)
T ss_dssp TTSTT-
T ss_pred cccccc
Confidence 765443
No 301
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=21.19 E-value=6.4e+02 Score=23.06 Aligned_cols=81 Identities=11% Similarity=-0.050 Sum_probs=54.9
Q ss_pred EEeHHHHHHHHHHHHHHHHH-------cCCCCCCEEEEEcCCc-hh---HHHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 007257 27 WKTYKEVYEEVLQIVSALRA-------SGAEPGCRVGIYGANC-PQ---WVEAMEACNALSLICVPLYDTLGPGAVNFIL 95 (611)
Q Consensus 27 ~~Ty~ql~~~~~~lA~~L~~-------~Gv~~gd~V~i~~~n~-~~---~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 95 (611)
.++..|.+-.+..+-..|.. .+..++.+|.+....+ .+ ..++...+-..|.-++.+-.+.|.+++...+
T Consensus 50 ~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~ 129 (201)
T cd02070 50 EIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAV 129 (201)
T ss_pred CeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 67888877665554443322 2222244666655443 22 3444445567899999999999999999999
Q ss_pred hhcCccEEEEcc
Q 007257 96 DHAEIDFVFVQD 107 (611)
Q Consensus 96 ~~~~~~~li~~~ 107 (611)
.+.+|++|..+-
T Consensus 130 ~~~~~d~v~lS~ 141 (201)
T cd02070 130 KEHKPDILGLSA 141 (201)
T ss_pred HHcCCCEEEEec
Confidence 999999988775
No 302
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=20.98 E-value=6.6e+02 Score=24.80 Aligned_cols=72 Identities=11% Similarity=-0.064 Sum_probs=49.6
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh----------------------------HHHHHHHHHhcCCEEe
Q 007257 29 TYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ----------------------------WVEAMEACNALSLICV 80 (611)
Q Consensus 29 Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~----------------------------~~~~~lA~~~~G~~~~ 80 (611)
.+.++.+....+...+++.|+. ..|.|..-++-. +.+-.+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4566677788899999998873 455554444322 3456778889999999
Q ss_pred eCCCCCCh--hHHHHHHhhcCccE
Q 007257 81 PLYDTLGP--GAVNFILDHAEIDF 102 (611)
Q Consensus 81 ~l~~~~~~--~~l~~~l~~~~~~~ 102 (611)
-..|.... ..+..+.++.+.-+
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvpi 228 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVPI 228 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEEE
T ss_pred eccCccccCCHHHHHHHHHcCCCe
Confidence 88888766 67888888766553
No 303
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=20.80 E-value=2.6e+02 Score=25.24 Aligned_cols=50 Identities=8% Similarity=-0.049 Sum_probs=34.7
Q ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCC
Q 007257 26 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSL 77 (611)
Q Consensus 26 ~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 77 (611)
..+||.|+.+.+.++|..+.+. ......+.+-..++-..++..+|- .+|.
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~-~l~~ 64 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP-RLDF 64 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH-HcCC
Confidence 6899999999999999999886 222223555566666666666654 3443
No 304
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=20.45 E-value=2.5e+02 Score=28.32 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=46.0
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCccEEEEcc
Q 007257 44 LRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 107 (611)
Q Consensus 44 L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~ 107 (611)
|+..+++||++|+|+.--+.-.+.+++|-.. |+.++-++..- +-.....+.+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 6667899999999998889999999988744 47777776643 334456778888888754
No 305
>PRK06178 acyl-CoA synthetase; Validated
Probab=20.44 E-value=8.1e+02 Score=26.50 Aligned_cols=101 Identities=7% Similarity=-0.188 Sum_probs=63.4
Q ss_pred CCCCceeeeccccCCCCCc--eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEeeC
Q 007257 7 PGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 82 (611)
Q Consensus 7 pd~~a~~~~~~~~~~~~~~--~~~Ty~ql~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l 82 (611)
++.+|++.-+ -|.+|.. ..+|+..+...+....... ..++++|++...+|-.-- ....+++.+..|+.++..
T Consensus 208 ~~~~a~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~ 283 (567)
T PRK06178 208 LDALAALNYT--GGTTGMPKGCEHTQRDMVYTAAAAYAVA--VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLL 283 (567)
T ss_pred CCCeEEEEeC--CCCCCCCceEEeccHHHHHHHHHHHHHh--ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEe
Confidence 4556665442 3444543 4667777655443333222 456788888777775322 223466677889888776
Q ss_pred CCCCChhHHHHHHhhcCccEEEEcchhHHH
Q 007257 83 YDTLGPGAVNFILDHAEIDFVFVQDKKVKE 112 (611)
Q Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 112 (611)
+ ...++.+...+++.++..+.........
T Consensus 284 ~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~ 312 (567)
T PRK06178 284 A-RWDAVAFMAAVERYRVTRTVMLVDNAVE 312 (567)
T ss_pred C-CCCHHHHHHHHHHhCCeEEeccHHHHHH
Confidence 5 5678889999999999988776554443
No 306
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=20.31 E-value=9.5e+02 Score=24.69 Aligned_cols=96 Identities=14% Similarity=0.061 Sum_probs=56.6
Q ss_pred CceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCC--CCCEEEEEcCCch--hHHHHHHHHHhcCCEEeeCC
Q 007257 10 RMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAE--PGCRVGIYGANCP--QWVEAMEACNALSLICVPLY 83 (611)
Q Consensus 10 ~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~--~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~ 83 (611)
.+++..+ -|.+|..+ .+|+..+...+..++..+ |+. +.|++..++|-.- -+...++..+.+|+.++...
T Consensus 97 ~~~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~ 171 (386)
T TIGR02372 97 ARFTFAT--SGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA 171 (386)
T ss_pred ceEEEEC--CCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC
Confidence 4444432 45566554 668889888777776655 443 3456777777652 33445566677898887665
Q ss_pred CCCChhHHHHHHhhcCccEEEEcchhHHHH
Q 007257 84 DTLGPGAVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
. .++..+-..++.. ++++..+.....+
T Consensus 172 ~-~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 172 A-APASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred C-CChHHHHHhhccC--CEEEECcHHHHHH
Confidence 3 5555444444322 5666666555544
No 307
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=20.04 E-value=8.2e+02 Score=26.90 Aligned_cols=103 Identities=10% Similarity=-0.170 Sum_probs=63.9
Q ss_pred CCCCCceeeeccccCCCCCce--EEeHHHHHHHHHHHHHHHHHcCCC--CCCEEEEEcCCc--hhHHHHHHHHHhcCCEE
Q 007257 6 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAE--PGCRVGIYGANC--PQWVEAMEACNALSLIC 79 (611)
Q Consensus 6 ~pd~~a~~~~~~~~~~~~~~~--~~Ty~ql~~~~~~lA~~L~~~Gv~--~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~ 79 (611)
.||.+|++.-+ -|.+|..+ .+|+..+...+..+...+ ++. .++++...+|-+ ..+...++.++..|+.+
T Consensus 207 ~~~d~a~ilyT--SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v 281 (614)
T PRK08180 207 GPDTIAKFLFT--SGSTGLPKAVINTHRMLCANQQMLAQTF---PFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTL 281 (614)
T ss_pred CcCceEEEEEC--CCCCCCCCEEEeehHHHHHHHHHHHhhc---cccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEE
Confidence 35666666553 45566544 678888877665554443 332 456766666643 23445566777889888
Q ss_pred eeCCCCCChh---HHHHHHhhcCccEEEEcchhHHHH
Q 007257 80 VPLYDTLGPG---AVNFILDHAEIDFVFVQDKKVKEL 113 (611)
Q Consensus 80 ~~l~~~~~~~---~l~~~l~~~~~~~li~~~~~~~~~ 113 (611)
+..+....+. ++-..+++.++.+++........+
T Consensus 282 ~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l 318 (614)
T PRK08180 282 YIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEML 318 (614)
T ss_pred EEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHH
Confidence 7765333333 455667889999988877655544
Done!