BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007260
(611 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 216 SHFRLLKRLGCGDIGSVYL-SELSGT--KCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
S F LLK LG G G V+L ++SG+ + +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 83
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
++HPF+ L+ F+TE L+++F GGDL T K+ F E+ V+FY+AE+ LAL+
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 141
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
E ++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + T+ ++
Sbjct: 181 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 240
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RC 564
L P+ +S A+ L+R L + P +RL A G EIK+H FF ++W + R
Sbjct: 241 KAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 298
Query: 565 ATPPEIP 571
PP P
Sbjct: 299 IHPPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 216 SHFRLLKRLGCGDIGSVYL-SELSGT--KCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
S F LLK LG G G V+L ++SG+ + +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
++HPF+ L+ F+TE L+++F GGDL T K+ F E+ V+FY+AE+ LAL+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
E ++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + T+ ++
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RC 564
L P+ +S A+ L+R L + P +RL A G EIK+H FF ++W + R
Sbjct: 240 KAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
Query: 565 ATPPEIP 571
PP P
Sbjct: 298 IHPPFKP 304
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 216 SHFRLLKRLGCGDIGSVYL-SELSGT--KCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
S F LLK LG G G V+L ++SG+ + +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
++HPF+ L+ F+TE L+++F GGDL T K+ F E+ V+FY+AE+ LAL+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
E ++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + T+ ++
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RC 564
L P+ +S A+ L+R L + P +RL A G EIK+H FF ++W + R
Sbjct: 240 KAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
Query: 565 ATPPEIP 571
PP P
Sbjct: 298 IHPPFKP 304
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 101/153 (66%), Gaps = 6/153 (3%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELS---GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
SHF LLK LG G G V+L + +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILAD 86
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
++HPF+ L+ F+TE L+++F GGDL T K+ F E+ V+FY+AE+ L L+
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLD 144
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+LH LGIIYRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 145 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
E ++ SF GT EY+APE++ +GH + DWW++G+ ++E+L G PF+G + T+ ++
Sbjct: 184 EKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLIL 243
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RC 564
L P+ +S A+ L+R L + P +RL GA EIK+H F+ ++W + R
Sbjct: 244 KAKLGMPQ--FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRRE 301
Query: 565 ATPPEIP 571
PP P
Sbjct: 302 IKPPFKP 308
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 106/159 (66%), Gaps = 9/159 (5%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYL-SELSG--TKCYFAMKVMDKASLAGRKKLL-RAQTERE 268
+G+ +F LLK LG G G V+L ++SG T +AMKV+ KA++ + K +TER+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 269 ILQSLDH-PFLPTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAE 326
+L+ + PFL TL+ F+TE L++++ GG+L T L Q++ F E V+ YV E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGE 167
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++LALE+LH LGIIYRD+K EN+L+ +GH++L+DF LS
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 10/141 (7%)
Query: 441 ELIAEPTEARSMSFVGTHEYLAPEIIKG--EGHGSAVDWWTFGIFLYELLFGKTPFKGSG 498
E +A+ TE R+ F GT EY+AP+I++G GH AVDWW+ G+ +YELL G +PF G
Sbjct: 208 EFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
Query: 499 NRATLFNVVGQPLR----FPESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPF 553
+ + + + L+ +P+ +S A+DLI+ LL+K+P+ RL R A EIK+H F
Sbjct: 267 EKNSQAEISRRILKSEPPYPQE--MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
Query: 554 FEGVNWALIRCATPPEIPKPV 574
F+ +NW + P KPV
Sbjct: 325 FQKINWDDLAAKKVPAPFKPV 345
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T +FAMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T +FAMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T +FAMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL-Q 271
LGL F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
+ +HPFL L++ F+TE V+E+ GGDL Q+Q + PE+ RFY AE+ LAL
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 134
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH GIIYRDLK +NVL+ +GHI L+D+ +
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 15/132 (11%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT--------LFN 505
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
Query: 506 VV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAY--KRGATEIKQHPFFEGVNWALI 562
V+ + +R P S +S A +++ L K+P+ RL + G +I+ HPFF V+W ++
Sbjct: 241 VILEKQIRIPRS--MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM 298
Query: 563 --RCATPPEIPK 572
+ PP P
Sbjct: 299 EQKQVVPPFKPN 310
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 101/181 (55%), Gaps = 9/181 (4%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F++L+ LG G G V+L Y+AMKV+ K + K++ ER +L +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HPF+ ++ F+ + ++M++ GG+L +L +K + FP +FY AEV LALEYL
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL 122
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDF-------DLSLRCAVSPTLIKASSLDAEPLRK 387
H IIYRDLKPEN+L+ ++GHI ++DF D++ +P I + +P K
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 388 N 388
+
Sbjct: 183 S 183
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 34/284 (11%)
Query: 301 GDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH----MLGIIYRDLKPENVLVREDGH 356
G +H +R + G+Y+ + ++ + L +E+ + ML I+ ++R
Sbjct: 20 GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIR---- 70
Query: 357 IMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIEPSCIQPSCVTPTCFSPR 416
M F + + + I+ L LRK+ + P+ + C +
Sbjct: 71 -MWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRF--------PNPVAKFYAAEVCLALE 120
Query: 417 LFSSKS--KKDRKPKNEI---GNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGH 471
SK +D KP+N + + A+ + GT +Y+APE++ + +
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPY 180
Query: 472 GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLL 531
++DWW+FGI +YE+L G TPF S T ++ LRFP P + +DL+ L+
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDLLSRLI 238
Query: 532 VKEPQHRLA-YKRGATEIKQHPFFEGVNWALI---RCATPPEIP 571
++ RL + G ++K HP+F+ V W + TP E P
Sbjct: 239 TRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP 282
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL-Q 271
LGL F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
+ +HPFL L++ F+TE V+E+ GGDL Q+Q + PE+ RFY AE+ LAL
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 119
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH GIIYRDLK +NVL+ +GHI L+D+ +
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 15/132 (11%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT--------LFN 505
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 225
Query: 506 VV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAY--KRGATEIKQHPFFEGVNWALI 562
V+ + +R P S +S A +++ L K+P+ RL + G +I+ HPFF V+W ++
Sbjct: 226 VILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 283
Query: 563 --RCATPPEIPK 572
+ PP P
Sbjct: 284 EQKQVVPPFKPN 295
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +I H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIXNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + +A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 303
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 338
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL-Q 271
LGL F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
+ +HPFL L++ F+TE V+E+ GGDL Q+Q + PE+ RFY AE+ LAL
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 123
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH GIIYRDLK +NVL+ +GHI L+D+ +
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 15/132 (11%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT--------LFN 505
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 506 VV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAY--KRGATEIKQHPFFEGVNWALI 562
V+ + +R P S +S A +++ L K+P+ RL + G +I+ HPFF V+W ++
Sbjct: 230 VILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 287
Query: 563 --RCATPPEIPK 572
+ PP P
Sbjct: 288 EQKQVVPPFKPN 299
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K +G G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGGD+ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL-Q 271
LGL F LL+ +G G V L L T +AM+V+ K + + + QTE+ + Q
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
+ +HPFL L++ F+TE V+E+ GGDL Q+Q + PE+ RFY AE+ LAL
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 166
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH GIIYRDLK +NVL+ +GHI L+D+ +
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT--------LF 504
+F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF G+ LF
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 505 NVV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAY--KRGATEIKQHPFFEGVNWAL 561
V+ + +R P S +S A +++ L K+P+ RL + G +I+ HPFF V+W +
Sbjct: 272 QVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329
Query: 562 I--RCATPPEIPK 572
+ + PP P
Sbjct: 330 MEQKQVVPPFKPN 342
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K +G G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGGD+ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 150
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 275
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 310
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ + GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + +A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 150
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 275
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 310
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 143
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ + GT EYLAPEII +G+ AVDWW
Sbjct: 151 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 210
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 211 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 268
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 269 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 303
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 208 ARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTER 267
A D + ++ F LK LG G G V L T Y+AMK++ K + + ++ TE
Sbjct: 2 AMDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 61
Query: 268 EILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVA 325
+LQ+ HPFL L F+T C VME+ GG+L H R+ + F E+ RFY A
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGA 117
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
E++ ALEYLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPEI 570
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW + + PP
Sbjct: 230 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 287
Query: 571 PKPV-EIERIPAPTSSTSEKTAPTMVPPNQRGSDNYLEFD 609
P+ E++ T++ + T+ PP++ S LE D
Sbjct: 288 PQVTSEVDTRYFDDEFTAQ--SITITPPDRYDSLGLLELD 325
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K +G G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E+ RFY AE++ ALE
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 122
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 154
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPE 569
FP + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW + + PP
Sbjct: 227 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 284
Query: 570 IPKPV-EIERIPAPTSSTSEKTAPTMVPPNQRGSDNYLEFD 609
P+ E++ T++ + T+ PP++ S LE D
Sbjct: 285 KPQVTSEVDTRYFDDEFTAQ--SITITPPDRYDSLGLLELD 323
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E+ RFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPE 569
FP + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW + + PP
Sbjct: 224 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 570 IPKPV-EIERIPAPTSSTSEKTAPTMVPPNQRGSDNYLEFD 609
P+ E++ T++ + T+ PP++ S LE D
Sbjct: 282 KPQVTSEVDTRYFDDEFTAQ--SITITPPDRYDSLGLLELD 320
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E+ RFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPE 569
FP + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW + + PP
Sbjct: 224 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 570 IPKPV-EIERIPAPTSSTSEKTAPTMVPPNQRGS 602
P+ E++ T++ + T+ PP++ S
Sbjct: 282 KPQVTSEVDTRYFDDEFTAQ--SITITPPDRYDS 313
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E+ RFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPEI 570
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW + + PP
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 571 PKPV-EIERIPAPTSSTSEKTAPTMVPPNQRGSDNYLEFD 609
P+ E++ T++ + T+ PP++ S LE D
Sbjct: 283 PQVTSEVDTRYFDDEFTAQ--SITITPPDRYDSLGLLELD 320
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E+ RFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPEI 570
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW + + PP
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 571 PKPV-EIERIPAPTSSTSEKTAPTMVPPNQRGSDNYLEFD 609
P+ E++ T++ + T+ PP++ S LE D
Sbjct: 283 PQVTSEVDTRYFDDEFTAQ--SITIXPPDRYDSLGLLELD 320
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
+ HF +L+ +G G G V + + + TK +AMK M+K R ++ E +I+Q
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HPFL L+ F+ E+ +V++ GGDL Q +F E+ V+ ++ E+++AL+
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFICELVMALD 129
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
YL II+RD+KP+N+L+ E GH+ ++DF+++
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 446 PTEARSMSFVGTHEYLAPEII---KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAT 502
P E + + GT Y+APE+ KG G+ AVDWW+ G+ YELL G+ P+ + ++
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 503 LFNVVGQPLRFPESPVVSFAAR------DLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
+ + E+ VV++ + L++ LL P R + ++++ P+
Sbjct: 226 -----KEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS---QLSDVQNFPYMND 277
Query: 557 VNW 559
+NW
Sbjct: 278 INW 280
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E+ RFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPEI 570
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW + + PP
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 571 PKPV-EIERIPAPTSSTSEKTAPTMVPPNQRGSDNYLEFD 609
P+ E++ T++ + T+ PP++ S LE D
Sbjct: 283 PQVTSEVDTRYFDDEFTAQ--SITITPPDRYDSLGLLELD 320
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E RFY AE++ AL+
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 262
Query: 333 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRDLK EN+++ +DGHI ++DF L
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RCATPPE 569
FP + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + +PP
Sbjct: 368 FPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 425
Query: 570 IPK 572
P+
Sbjct: 426 KPQ 428
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E RFY AE++ AL+
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 265
Query: 333 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRDLK EN+++ +DGHI ++DF L
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +R
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RCATPPE 569
FP + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + +PP
Sbjct: 371 FPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 428
Query: 570 IPK 572
P+
Sbjct: 429 KPQ 431
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 144
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ E G+I ++DF + R
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWW 478
+D KP+N + + QV+ A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 152 RDLKPENLLIDEQGYIQVTDFG--FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 209
Query: 479 TFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHR 538
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 210 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKR 267
Query: 539 LA-YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM- 594
K G +IK H +F +W I R P IPK + P TS+ + +
Sbjct: 268 FGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIR 323
Query: 595 VPPNQRGSDNYLEF 608
V N++ + EF
Sbjct: 324 VXINEKCGKEFTEF 337
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 7/160 (4%)
Query: 208 ARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTER 267
A D + ++ F LK LG G G V L + T Y+AMK++ K + + ++ TE
Sbjct: 2 AMDPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 61
Query: 268 EILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVA 325
+LQ+ HPFL L F+T C VME+ GG+L H R+ + F E RFY A
Sbjct: 62 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGA 117
Query: 326 EVLLALEYLHM-LGIIYRDLKPENVLVREDGHIMLSDFDL 364
E++ AL+YLH ++YRDLK EN+++ +DGHI ++DF L
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RCATPPEI 570
P + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + +PP
Sbjct: 231 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 288
Query: 571 PKPVEIERIPAPTSSTSEKTAPTMVPPNQRGS 602
P+ V E T+ PP+Q S
Sbjct: 289 PQ-VTSETDTRYFDEEFTAQMITITPPDQDDS 319
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT E LAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLPNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNADDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKAFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FAEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +Y++ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAP II +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 339
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 340 INEKCGKEFTEF 351
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + + + GT EYLAPEII +G+ AVDWW
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 303
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 359
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 360 INEKCGKEFTEF 371
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 178
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 303
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSE-KTAPTMVP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIAVS 359
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 360 INEKCGKEFTEF 371
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Query: 193 HKANDLRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKA 252
+ A+ L+W VR ++ L F +LK +G G V + ++ T +AMK+M+K
Sbjct: 38 YVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW 97
Query: 253 SLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
+ R ++ + ER++L + D ++ L+ F+ E + LVME+ GGDL TL K G
Sbjct: 98 DMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-G 156
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSP 372
+ P + RFY+AE+++A++ +H LG ++RD+KP+N+L+ GHI L+DF L+
Sbjct: 157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216
Query: 373 TL 374
T+
Sbjct: 217 TV 218
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 449 ARSMSFVGTHEYLAPEIIKGEGHGSA-------VDWWTFGIFLYELLFGKTPFKGSGNRA 501
RS+ VGT +YL+PEI++ G G DWW G+F YE+ +G+TPF
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
Query: 502 TLFNVVG--QPLRFP-ESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN 558
T +V + L P V ARD I+ LL P+ RL + GA + + HPFF G++
Sbjct: 278 TYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGLD 335
Query: 559 WALIRCATPPEIP 571
W +R + PP P
Sbjct: 336 WDGLRDSVPPFTP 348
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 152
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 160 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 219
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 220 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 277
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 278 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVX 333
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 334 INEKCGKEFTEF 345
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +VME+ GG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N I +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 165 RDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWAL 224
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPKPVEIERIPAPTSSTSEKTAPTM-VP 596
K G +IK H +F +W I R P IPK + P TS+ + + V
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF----KGPGDTSNFDDYEEEEIRVS 338
Query: 597 PNQRGSDNYLEF 608
N++ + EF
Sbjct: 339 INEKCGKEFTEF 350
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E RFY AE++ AL+
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 122
Query: 333 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRDLK EN+++ +DGHI ++DF L
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RCATPPEI 570
P + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + +PP
Sbjct: 229 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 286
Query: 571 PKPVEIERIPAPTSSTSEKTAPTMVPPNQRGS 602
P+ V E T+ PP+Q S
Sbjct: 287 PQ-VTSETDTRYFDEEFTAQMITITPPDQDDS 317
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
++ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
HPFL L F+T C VME+ GG+L H R+ + F E RFY AE++ AL+
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 123
Query: 333 YLHM-LGIIYRDLKPENVLVREDGHIMLSDFDL 364
YLH ++YRDLK EN+++ +DGHI ++DF L
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF + ++ + +RF
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRL-AYKRGATEIKQHPFFEGVNWALI--RCATPPEI 570
P + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + +PP
Sbjct: 230 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 287
Query: 571 PKPVEIERIPAPTSS---TSEKTAP--TMVPPNQRGS 602
P+ + + T + E TA T+ PP+Q S
Sbjct: 288 PQ------VTSETDTRYFDEEFTAQMITITPPDQDDS 318
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L F ++ LG G G V L + T ++AMK++DK + K++ E+ I Q+++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
PFL L F+ +V+E+ PGG++ + ++ G+ F E RFY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
H L +IYRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTF 480
+D KP+N + +Q + A+ + R+ GT EYLAPEII +G+ AVDWW
Sbjct: 166 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLA 540
G+ +YE+ G PF +V +RFP S +DL+R LL + R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 541 -YKRGATEIKQHPFFEGVNWALI--RCATPPEIPK 572
K G +IK H +F +W I R P IPK
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL-QSLD 274
S F LK +G G G V L+ + ++A+KV+ K ++ +K+ +ER +L +++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HPFL L+ F+T V+++ GG+L Q++ + F E RFY AE+ AL YL
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYL 155
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
H L I+YRDLKPEN+L+ GHI+L+DF L
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGL 185
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 424 KDRKPKNEI----GNQVSPLPELIAEPTEARSMS--FVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP+N + G+ V L E E S + F GT EYLAPE++ + + VDW
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDW 222
Query: 478 WTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQH 537
W G LYE+L+G PF N++ +PL+ P ++ +AR L+ GLL K+
Sbjct: 223 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSARHLLEGLLQKDRTK 280
Query: 538 RLAYKRGATEIKQHPFFEGVNW--ALIRCATPPEIP 571
RL K EIK H FF +NW + + TPP P
Sbjct: 281 RLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNP 316
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 207 RARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+ RD + + ++K +G G G V L T+ +AMK++ K + R E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
R+I+ + P++ L+ F+ +++ +VME+ PGGDL L PE+ RFY AE
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 176
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
V+LAL+ +H +G I+RD+KP+N+L+ + GH+ L+DF
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 455 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ- 509
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Query: 510 -PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL--IRCAT 566
L FP+ +S A++LI L + + RL + G EIK+H FF+ WA +R
Sbjct: 290 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 347
Query: 567 PPEIP 571
P +P
Sbjct: 348 APVVP 352
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 207 RARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+ RD + + ++K +G G G V L T+ +AMK++ K + R E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
R+I+ + P++ L+ F+ +++ +VME+ PGGDL L PE+ RFY AE
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 181
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
V+LAL+ +H +G I+RD+KP+N+L+ + GH+ L+DF
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 455 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ- 509
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 510 -PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL--IRCAT 566
L FP+ +S A++LI L + + RL + G EIK+H FF+ WA +R
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 567 PPEIP 571
P +P
Sbjct: 353 APVVP 357
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 207 RARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+ RD + + ++K +G G G V L T+ +AMK++ K + R E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
R+I+ + P++ L+ F+ +++ +VME+ PGGDL L PE+ RFY AE
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 181
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
V+LAL+ +H +G I+RD+KP+N+L+ + GH+ L+DF
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 455 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ- 509
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 510 -PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL--IRCAT 566
L FP+ +S A++LI L + + RL + G EIK+H FF+ WA +R
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 567 PPEIP 571
P +P
Sbjct: 353 APVVP 357
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQ- 271
LG+ +F ++ LG G G V L+ + T +A+KV+ K + + TE+ IL
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
+ +HPFL L+ F+T VMEF GGDL + Q + F E RFY AE++ AL
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+LH GIIYRDLK +NVL+ +GH L+DF +
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 451 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 510
+ +F GT +Y+APEI++ +G AVDWW G+ LYE+L G PF+ ++
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE 240
Query: 511 LRFPESPVVSFAARDLIRGLLVKEPQHRLA--YKRGATEIKQHPFFEGVNWALI--RCAT 566
+ +P + A +++ + K P RL + G I +HPFF+ ++WA + R
Sbjct: 241 VVYP--TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIE 298
Query: 567 PPEIPK 572
PP P+
Sbjct: 299 PPFRPR 304
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Query: 198 LRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGR 257
L W + + L F +LK +G G G V + +L FAMK+++K + R
Sbjct: 56 LEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR 115
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPE 317
+ + ER++L + D ++ TL+ F+ + LVM++ GGDL TL K + PE
Sbjct: 116 AETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPE 174
Query: 318 QAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
+ RFY+AE+++A++ +H L ++RD+KP+N+L+ +GHI L+DF L+
Sbjct: 175 EMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 443 IAEPTEARSMSFVGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGS 497
+ E +S VGT +Y++PEI++ G+G +G DWW+ G+ +YE+L+G+TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 498 GNRATLFNVVGQPLRF---PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
T ++ RF + VS A+DLIR L+ +HRL + G + K+HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLG-QNGIEDFKKHPFF 342
Query: 555 EGVNWALIR-CATP--PEIPKPVEIERIPAPTSSTSEKTAPTMVPPNQ 599
G++W IR C P PE+ P + K + TM PP
Sbjct: 343 SGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCL--KNSETMPPPTH 388
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 150/369 (40%), Gaps = 103/369 (27%)
Query: 218 FRLLKRLGCGDIGSVY-LSELSG--TKCYFAMKVMDKASLA-GRKKLLRAQTEREILQSL 273
F LL+ LG G G V+ + +++G T FAMKV+ KA + K + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
HPF+ L + F GG L+ L LEY
Sbjct: 79 KHPFIVDL------------IYAFQTGGKLY------------------------LILEY 102
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
L G ++ L+ E + + + L++ ++L +K +Y
Sbjct: 103 LSG-GELFMQLEREGIFMEDTACFYLAEISMAL---------------GHLHQKGIIY-- 144
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLP--------ELIAE 445
+D KP+N + N + E I +
Sbjct: 145 ------------------------------RDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFN 505
T + +F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G + T+
Sbjct: 175 GT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK 232
Query: 506 VVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRG-ATEIKQHPFFEGVNWA--LI 562
++ L P P ++ ARDL++ LL + RL G A E++ HPFF +NW L
Sbjct: 233 ILKCKLNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA 290
Query: 563 RCATPPEIP 571
R PP P
Sbjct: 291 RKVEPPFKP 299
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 218 FRLLKRLGCGDIGSVY-LSELSG--TKCYFAMKVMDKASLA-GRKKLLRAQTEREILQSL 273
F LL+ LG G G V+ + +++G T FAMKV+ KA + K + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
HPF+ L F+T L++E+ GG+L Q + F E FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
LH GIIYRDLKPEN+++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQ- 271
L + F L K LG G G V+L+E T +FA+K + K + + E+ +L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
+ +HPFL ++ F+T++ VME+ GGDL + Q F FY AE++L L
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
++LH GI+YRDLK +N+L+ +DGHI ++DF +
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 165
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
+A++ F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G ++
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALI--RCA 565
+P + A+DL+ L V+EP+ RL RG +I+QHP F +NW + +
Sbjct: 233 MDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV-RG--DIRQHPLFREINWEELERKEI 287
Query: 566 TPPEIPK 572
PP PK
Sbjct: 288 DPPFRPK 294
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F ++K +G G G V + ++ T+ +AMK+++K + R + + ER++L + D +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ F+ E LVM++ GGDL TL K K PE RFY+ E++LA++ +H L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 210
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
++RD+KP+NVL+ +GHI L+DF L+
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 240
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 455 VGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
VGT +Y++PEI++ G G +G DWW+ G+ +YE+L+G+TPF T ++
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 510 PLRF---PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCAT 566
RF VS A+DLI+ L+ + RL + G + K+H FFEG+NW IR
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLNWENIRNLE 370
Query: 567 PPEIP 571
P IP
Sbjct: 371 APYIP 375
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F ++K +G G G V + ++ T+ +AMK+++K + R + + ER++L + D +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ F+ E LVM++ GGDL TL K K PE RFY+ E++LA++ +H L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 194
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
++RD+KP+NVL+ +GHI L+DF L+
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 224
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 455 VGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
VGT +Y++PEI++ G G +G DWW+ G+ +YE+L+G+TPF T ++
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 510 PLRF---PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCAT 566
RF VS A+DLI+ L+ + RL + G + K+H FFEG+NW IR
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLNWENIRNLE 354
Query: 567 PPEIP 571
P IP
Sbjct: 355 APYIP 359
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++K +G G G V L ++ +AMK++ K + R ER+I+ + P+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ F+ +K+ +VME+ PGGDL L PE+ +FY AEV+LAL+ +H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLALDAIHSM 193
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
G+I+RD+KP+N+L+ + GH+ L+DF ++
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMK 223
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 10/126 (7%)
Query: 455 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ- 509
VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T ++
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 510 -PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG--VNWALIRCAT 566
L FPE +S A++LI L + + RL + G EIKQHPFF+ NW IR
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 567 PPEIPK 572
P +P+
Sbjct: 354 APVVPE 359
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ SFVGT +Y++PE++ + +
Sbjct: 157 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 216
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 217 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 273
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 157 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 216
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 217 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 273
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQ- 271
L + F L K LG G G V+L+E T +FA+K + K + + E+ +L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
+ +HPFL ++ F+T++ VME+ GGDL + Q F FY AE++L L
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
++LH GI+YRDLK +N+L+ +DGHI ++DF +
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 164
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
+A++ F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G ++
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALI--RCA 565
+P + A+DL+ L V+EP+ RL RG +I+QHP F +NW + +
Sbjct: 232 MDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV-RG--DIRQHPLFREINWEELERKEI 286
Query: 566 TPPEIPK 572
PP PK
Sbjct: 287 DPPFRPK 293
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS 215
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLF-NVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 216 DLWALGCIIYQLVAGLPPFR-AGNEGLIFAKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 272
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ +FVGT +Y++PE++ + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS 213
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 214 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 270
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 216 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 272
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 214 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 270
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 216 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 272
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 214 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 270
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLF-NVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 216 DLWALGCIIYQLVAGLPPFR-AGNEGLIFAKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 272
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDF 179
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 159 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 218
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FP + ARDL+ LLV +
Sbjct: 219 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPAAFFPK--ARDLVEKLLVLD 275
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 276 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 313
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDF 154
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 134 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 193
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 194 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 250
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 251 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 288
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDF 153
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 133 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 192
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 193 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 249
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPE 569
RL + G +K HPFFE V W + TPP+
Sbjct: 250 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPK 286
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 216 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 272
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDF 151
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 131 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 190
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 191 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 247
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 248 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDF 152
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 132 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 191
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 192 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 248
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 249 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDF 158
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 138 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 197
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 198 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 254
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 255 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 292
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ SFVGT +Y++PE++ + +
Sbjct: 153 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 212
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 213 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 269
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDF 181
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 161 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 220
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 221 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 277
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 278 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 315
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 153 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 212
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 213 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 269
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G + L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ FVGT +Y++PE++ + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 214 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 270
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F+ K LG G +V L+ T +A+K+++K + K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY F+ ++ + + G L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 338 GIIYRDLKPENVLVREDGHIMLSDF 362
GII+RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 424 KDRKPKNEIGN-----QVSPLPE---LIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAV 475
+D KP+N + N Q++ L E +AR+ SFVGT +Y++PE++ + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSS 215
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFN-VVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W G +Y+L+ G PF+ +GN +F ++ FPE ARDL+ LLV +
Sbjct: 216 DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPEKFFPK--ARDLVEKLLVLD 272
Query: 535 PQHRLAYK--RGATEIKQHPFFEGVNWALIRCATPPEI 570
RL + G +K HPFFE V W + TPP++
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 16/190 (8%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L+ F L LG G G V L++ GT+ +A+K++ K + + E+ +L LD
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 275 HP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
P FL L++ F+T VME+ GGDL +Q GK+ QAV FY AE+ + L +
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDL-MYHIQQVGKFKEPQAV-FYAAEISIGLFF 135
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
LH GIIYRDLK +NV++ +GHI ++DF + K +D R+ +C
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC----------KEHMMDGVTTRE---FCG 182
Query: 394 QPACIEPSCI 403
P I P I
Sbjct: 183 TPDYIAPEII 192
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT +Y+APEII + +G +VDWW +G+ LYE+L G+ PF G +++ + +
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 239
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPEI 570
P+S +S A + +GL+ K P RL G ++++H FF ++W + R PP
Sbjct: 240 PKS--LSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFK 297
Query: 571 PKPVEIERIPAPTSSTSEKTAPTMVPPNQRGSDNYLEFDF 610
PK + + P + PP+Q N + DF
Sbjct: 298 PKVC--GKGAENFDKFFTRGQPVLXPPDQLVIANIDQSDF 335
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
FR + LG G G V ++ T +A K ++K + RK A E++IL+ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ +L +ET+ CLV+ GGDL H Q G FPE FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTL---IKASSLDAEPLRKNPVYC 392
I+YRDLKPEN+L+ + GHI +SD L++ T+ + A + KN Y
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAE--PTEAR 450
P C+ + SP F + KK + + E+ V +PE +E +AR
Sbjct: 364 FSPDWWALGCLLYEMIAGQ--SP--FQQRKKKIK--REEVERLVKEVPEEYSERFSPQAR 417
Query: 451 SM 452
S+
Sbjct: 418 SL 419
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 424 KDRKPKNEIGN-----QVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWW 478
+D KP+N + + ++S L + P VGT Y+APE++K E + + DWW
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWW 369
Query: 479 TFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFA--ARDLIRGLLVKEPQ 536
G LYE++ G++PF+ + V PE F+ AR L LL K+P
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPA 429
Query: 537 HRLAYKRG-ATEIKQHPFFEGVNWALIRCAT--PPEIPKPVEI 576
RL + G A E+K+HP F+ +N+ + PP P P I
Sbjct: 430 ERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAI 472
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 140/345 (40%), Gaps = 92/345 (26%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA-GRKK----LLRAQTEREILQSLDHP 276
K LG G G V L+ T A+K++ K A G + L +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ + F+ E + +V+E GG+L + K E + Y ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 337 LGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
GII+RDLKPENVL+ ED I ++DF S
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------------------ 168
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMS 453
E S ++ C TPT +P + S
Sbjct: 169 -----ETSLMRTLCGTPTYLAPEVLVS--------------------------------- 190
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV--GQPL 511
VGT G+ AVD W+ G+ L+ L G PF + +L + + G+
Sbjct: 191 -VGT-----------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 512 RFPESPV-VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A DL++ LLV +P+ R E +HP+ +
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 140/345 (40%), Gaps = 92/345 (26%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA-GRKK----LLRAQTEREILQSLDHP 276
K LG G G V L+ T A+K++ K A G + L +TE EIL+ L+HP
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ + F+ E + +V+E GG+L + K E + Y ++LLA++YLH
Sbjct: 75 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 337 LGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
GII+RDLKPENVL+ ED I ++DF S
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------------------ 167
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMS 453
E S ++ C TPT +P + S
Sbjct: 168 -----ETSLMRTLCGTPTYLAPEVLVS--------------------------------- 189
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV--GQPL 511
VGT G+ AVD W+ G+ L+ L G PF + +L + + G+
Sbjct: 190 -VGT-----------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 512 RFPESPV-VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A DL++ LLV +P+ R E +HP+ +
Sbjct: 238 FIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 140/345 (40%), Gaps = 92/345 (26%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA-GRKK----LLRAQTEREILQSLDHP 276
K LG G G V L+ T A+K++ K A G + L +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ + F+ E + +V+E GG+L + K E + Y ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 337 LGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
GII+RDLKPENVL+ ED I ++DF S
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------------------ 168
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMS 453
E S ++ C TPT +P + S
Sbjct: 169 -----ETSLMRTLCGTPTYLAPEVLVS--------------------------------- 190
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV--GQPL 511
VGT G+ AVD W+ G+ L+ L G PF + +L + + G+
Sbjct: 191 -VGT-----------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 512 RFPESPV-VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A DL++ LLV +P+ R E +HP+ +
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 279
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
FR + LG G G V ++ T +A K ++K + RK A E++IL+ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ +L +ET+ CLV+ GGDL H Q G FPE FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTL---IKASSLDAEPLRKNPVYC 392
I+YRDLKPEN+L+ + GHI +SD L++ T+ + A + KN Y
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAE--PTEAR 450
P C+ + SP F + KK + + E+ V +PE +E +AR
Sbjct: 364 FSPDWWALGCLLYEMIAGQ--SP--FQQRKKKIK--REEVERLVKEVPEEYSERFSPQAR 417
Query: 451 SM 452
S+
Sbjct: 418 SL 419
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 424 KDRKPKNEIGN-----QVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWW 478
+D KP+N + + ++S L + P VGT Y+APE++K E + + DWW
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWW 369
Query: 479 TFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFA--ARDLIRGLLVKEPQ 536
G LYE++ G++PF+ + V PE F+ AR L LL K+P
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPA 429
Query: 537 HRLAYKRG-ATEIKQHPFFEGVNWALIRCAT--PPEIPKPVEI 576
RL + G A E+K+HP F+ +N+ + PP P P I
Sbjct: 430 ERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAI 472
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 140/345 (40%), Gaps = 92/345 (26%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA-GRKK----LLRAQTEREILQSLDHP 276
K LG G G V L+ T A+K++ K A G + L +TE EIL+ L+HP
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ + F+ E + +V+E GG+L + K E + Y ++LLA++YLH
Sbjct: 82 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 337 LGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
GII+RDLKPENVL+ ED I ++DF S
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------------------ 174
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMS 453
E S ++ C TPT +P + S
Sbjct: 175 -----ETSLMRTLCGTPTYLAPEVLVS--------------------------------- 196
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV--GQPL 511
VGT G+ AVD W+ G+ L+ L G PF + +L + + G+
Sbjct: 197 -VGT-----------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 512 RFPESPV-VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A DL++ LLV +P+ R E +HP+ +
Sbjct: 245 FIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 140/345 (40%), Gaps = 92/345 (26%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA-GRKK----LLRAQTEREILQSLDHP 276
K LG G G V L+ T A+K++ K A G + L +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ + F+ E + +V+E GG+L + K E + Y ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 337 LGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
GII+RDLKPENVL+ ED I ++DF S
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------------------ 168
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMS 453
E S ++ C TPT +P + S
Sbjct: 169 -----ETSLMRTLCGTPTYLAPEVLVS--------------------------------- 190
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV--GQPL 511
VGT G+ AVD W+ G+ L+ L G PF + +L + + G+
Sbjct: 191 -VGT-----------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 512 RFPESPV-VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A DL++ LLV +P+ R E +HP+ +
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 279
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L ++ F + + +G G G VY + T +AMK +DK + ++ A ER +L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 273 L---DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ D PF+ + F T +++ GGDLH Q G F E +RFY AE++L
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEIIL 302
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
LE++H ++YRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 342
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 23/169 (13%)
Query: 424 KDRKPKN----EIGN-QVSPLPELIAEPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDW 477
+D KP N E G+ ++S L L + ++ + + VGTH Y+APE++ KG + S+ DW
Sbjct: 315 RDLKPANILLDEHGHVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 373
Query: 478 WTFGIFLYELLFGKTPF-------KGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGL 530
++ G L++LL G +PF K +R TL V P F SP + R L+ GL
Sbjct: 374 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGL 427
Query: 531 LVKEPQHRLA-YKRGATEIKQHPFFEGVNWALIRCAT--PPEIPKPVEI 576
L ++ RL RGA E+K+ PFF ++W ++ PP IP E+
Sbjct: 428 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEV 476
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L ++ F + + +G G G VY + T +AMK +DK + ++ A ER +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 273 L---DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ D PF+ + F T +++ GGDLH Q G F E +RFY AE++L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEIIL 303
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
LE++H ++YRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 23/169 (13%)
Query: 424 KDRKPKN----EIGN-QVSPLPELIAEPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDW 477
+D KP N E G+ ++S L L + ++ + + VGTH Y+APE++ KG + S+ DW
Sbjct: 316 RDLKPANILLDEHGHVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 478 WTFGIFLYELLFGKTPF-------KGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGL 530
++ G L++LL G +PF K +R TL V P F SP + R L+ GL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGL 428
Query: 531 LVKEPQHRLA-YKRGATEIKQHPFFEGVNWALIRCAT--PPEIPKPVEI 576
L ++ RL RGA E+K+ PFF ++W ++ PP IP E+
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEV 477
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L ++ F + + +G G G VY + T +AMK +DK + ++ A ER +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 273 L---DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ D PF+ + F T +++ GGDLH Q G F E +RFY AE++L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEIIL 303
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
LE++H ++YRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 23/164 (14%)
Query: 424 KDRKPKN----EIGN-QVSPLPELIAEPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDW 477
+D KP N E G+ ++S L L + ++ + + VGTH Y+APE++ KG + S+ DW
Sbjct: 316 RDLKPANILLDEHGHVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 478 WTFGIFLYELLFGKTPF-------KGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGL 530
++ G L++LL G +PF K +R TL V P F SP + R L+ GL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGL 428
Query: 531 LVKEPQHRLA-YKRGATEIKQHPFFEGVNWALIRCAT--PPEIP 571
L ++ RL RGA E+K+ PFF ++W ++ PP IP
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L ++ F + + +G G G VY + T +AMK +DK + ++ A ER +L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 273 L---DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ D PF+ + F T +++ GGDLH Q G F E +RFY AE++L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH-YHLSQHG-VFSEADMRFYAAEIIL 303
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
LE++H ++YRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 23/164 (14%)
Query: 424 KDRKPKN----EIGN-QVSPLPELIAEPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDW 477
+D KP N E G+ ++S L L + ++ + + VGTH Y+APE++ KG + S+ DW
Sbjct: 316 RDLKPANILLDEHGHVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 478 WTFGIFLYELLFGKTPF-------KGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGL 530
++ G L++LL G +PF K +R TL V P F SP + R L+ GL
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF--SPEL----RSLLEGL 428
Query: 531 LVKEPQHRLA-YKRGATEIKQHPFFEGVNWALIRCAT--PPEIP 571
L ++ RL RGA E+K+ PFF ++W ++ PP IP
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
+ L+ F L LG G G V LSE GT +A+K++ K + + E+ +L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 273 LDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
P FL L++ F+T VME+ GGDL +Q G++ AV FY AE+ + L
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRFKEPHAV-FYAAEIAIGL 455
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+L GIIYRDLK +NV++ +GHI ++DF +
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G +++ + +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPEI 570
P+S +S A + +GL+ K P RL G +IK+H FF ++W + + PP
Sbjct: 562 PKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 619
Query: 571 PKPVEIERIPAPTSSTSEKTAPTMVPPNQ 599
PK R + P + PP+Q
Sbjct: 620 PKAS--GRNAENFDRFFTRHPPVLXPPDQ 646
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 198 LRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGR 257
L+W+ ++A +G F + LG G G V+ ++ T +A K ++K L R
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLRQKQPGK 313
K A E++IL + F+ +L FET+ CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 314 YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
F E FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 374 LIKASS 379
K +
Sbjct: 345 KTKGYA 350
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 424 KDRKPKNEI----GN-QVSPLPELIA-EPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP+N + GN ++S L + + + ++ + GT ++APE++ GE + +VD+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 478 WTFGIFLYELLFGKTPFKGSG----NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVK 533
+ G+ LYE++ + PF+ G N+ V+ Q + +P+ S A++D LL K
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQK 430
Query: 534 EPQHRLAYKRGATE-IKQHPFFEGVNWALIRCA--TPPEIP 571
+P+ RL ++ G+ + ++ HP F ++W + TPP +P
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 198 LRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGR 257
L+W+ ++A +G F + LG G G V+ ++ T +A K ++K L R
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLRQKQPGK 313
K A E++IL + F+ +L FET+ CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 314 YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
F E FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 374 LIKASS 379
K +
Sbjct: 345 KTKGYA 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 424 KDRKPKNEI----GN-QVSPLPELIA-EPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP+N + GN ++S L + + + ++ + GT ++APE++ GE + +VD+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 478 WTFGIFLYELLFGKTPFKGSG----NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVK 533
+ G+ LYE++ + PF+ G N+ V+ Q + +P+ S A++D LL K
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQK 430
Query: 534 EPQHRLAYKRGATE-IKQHPFFEGVNWALIRCA--TPPEIP 571
+P+ RL ++ G+ + ++ HP F ++W + TPP +P
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 198 LRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGR 257
L+W+ ++A +G F + LG G G V+ ++ T +A K ++K L R
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLRQKQPGK 313
K A E++IL + F+ +L FET+ CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 314 YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
F E FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 374 LIKASS 379
K +
Sbjct: 345 KTKGYA 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 424 KDRKPKNEI----GN-QVSPLPELIA-EPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP+N + GN ++S L + + + ++ + GT ++APE++ GE + +VD+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 478 WTFGIFLYELLFGKTPFKGSG----NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVK 533
+ G+ LYE++ + PF+ G N+ V+ Q + +P+ S A++D LL K
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQK 430
Query: 534 EPQHRLAYKRGATE-IKQHPFFEGVNWALIRCA--TPPEIP 571
+P+ RL ++ G+ + ++ HP F ++W + TPP +P
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 198 LRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGR 257
L+W+ ++A +G F + LG G G V+ ++ T +A K ++K L R
Sbjct: 172 LQWKWLEAQ-----PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR 226
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLRQKQPGK 313
K A E++IL + F+ +L FET+ CLVM GGD+ + + + PG
Sbjct: 227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG- 285
Query: 314 YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
F E FY A+++ LE+LH IIYRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 -FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 374 LIKASS 379
K +
Sbjct: 345 KTKGYA 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 424 KDRKPKNEI----GN-QVSPLPELIA-EPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP+N + GN ++S L + + + ++ + GT ++APE++ GE + +VD+
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 478 WTFGIFLYELLFGKTPFKGSG----NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVK 533
+ G+ LYE++ + PF+ G N+ V+ Q + +P+ S A++D LL K
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQK 430
Query: 534 EPQHRLAYKRGATE-IKQHPFFEGVNWALIRCA--TPPEIP 571
+P+ RL ++ G+ + ++ HP F ++W + TPP +P
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
+ L+ F L LG G G V LSE GT +A+K++ K + + E+ +L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 273 LDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
P FL L++ F+T VME+ GGDL +Q G++ AV FY AE+ + L
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRFKEPHAV-FYAAEIAIGL 134
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+L GIIYRDLK +NV++ +GHI ++DF +
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G +++ + +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYK-RGATEIKQHPFFEGVNWALI--RCATPPEI 570
P+S +S A + +GL+ K P RL G +IK+H FF ++W + + PP
Sbjct: 241 PKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 298
Query: 571 PKPVEIERIPAPTSSTSEKTAPTMVPPNQ 599
PK R + P + PP+Q
Sbjct: 299 PKAC--GRNAENFDRFFTRHPPVLXPPDQ 325
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 205 AVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLR 262
A+ ++ L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 263 AQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
E EI L HP + LY +F L++E+ P G+++ QK F EQ
Sbjct: 62 --REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTAT 117
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDA 382
Y+ E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 383 EP 384
P
Sbjct: 178 LP 179
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 449 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVG 508
+R + GT +YL PE+I+G H VD W+ G+ YE L GK PF+ + + T +
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
FP+ V+ ARDLI LL P R + E+ +HP+
Sbjct: 226 VEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 89
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 147
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 200
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 205 AVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLR 262
A+ ++ L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 263 AQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
E EI L HP + LY +F L++E+ P G+++ QK F EQ
Sbjct: 62 --REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTAT 117
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDA 382
Y+ E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDY 177
Query: 383 EP 384
P
Sbjct: 178 LP 179
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 449 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVG 508
+R GT +YL PE+I+G H VD W+ G+ YE L GK PF+ + + T +
Sbjct: 166 SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
FP+ V+ ARDLI LL P R + E+ +HP+
Sbjct: 226 VEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 264
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 140/345 (40%), Gaps = 92/345 (26%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA-GRKK----LLRAQTEREILQSLDHP 276
K LG G G V L+ T A++++ K A G + L +TE EIL+ L+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ + F+ E + +V+E GG+L + K E + Y ++LLA++YLH
Sbjct: 215 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 337 LGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
GII+RDLKPENVL+ ED I ++DF S
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------------------ 307
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMS 453
E S ++ C TPT +P + S
Sbjct: 308 -----ETSLMRTLCGTPTYLAPEVLVS--------------------------------- 329
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV--GQPL 511
VGT G+ AVD W+ G+ L+ L G PF + +L + + G+
Sbjct: 330 -VGT-----------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 512 RFPESPV-VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A DL++ LLV +P+ R E +HP+ +
Sbjct: 378 FIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 140/345 (40%), Gaps = 92/345 (26%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA-GRKK----LLRAQTEREILQSLDHP 276
K LG G G V L+ T A++++ K A G + L +TE EIL+ L+HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ + F+ E + +V+E GG+L + K E + Y ++LLA++YLH
Sbjct: 201 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 337 LGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCV 393
GII+RDLKPENVL+ ED I ++DF S
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------------------------ 293
Query: 394 QPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMS 453
E S ++ C TPT +P + S
Sbjct: 294 -----ETSLMRTLCGTPTYLAPEVLVS--------------------------------- 315
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV--GQPL 511
VGT G+ AVD W+ G+ L+ L G PF + +L + + G+
Sbjct: 316 -VGT-----------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 512 RFPESPV-VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A DL++ LLV +P+ R E +HP+ +
Sbjct: 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 404
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
Query: 205 AVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLR 262
A+ ++ L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 263 AQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
E EI L HP + LY +F L++E+ P G ++ R+ Q F EQ
Sbjct: 62 --REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTAT 117
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDA 382
Y+ E+ AL Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 383 EP 384
P
Sbjct: 178 LP 179
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR + E I
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE--IQS 80
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 138
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 191
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 68
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 126
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 174
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 174
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 66
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 65
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 123
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 176
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 64
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 122
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S S + +LD P
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLP 175
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 66
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 177
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 67
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 125
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 89
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 147
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLP 200
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 62
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 120
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 173
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 66
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLP 174
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 174
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 174
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLP 174
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 68
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 126
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 179
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 64
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 122
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLP 175
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 64
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 122
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 66
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 177
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 65
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 123
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + +++F S+ S +LD P
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 176
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
L F + + LG G G+VYL+ +K A+KV+ K L AG + LR + E I
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE--IQSH 68
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALS 126
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ +G + ++DF S+ S +LD P
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ K A+KV+ KA L AG + LR E EI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 60
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 118
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 171
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 66
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + +++F S+ S +LD P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 177
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQ 271
L F + + LG G G+VYL+ +K A+KV+ KA L AG + LR E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQS 66
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANAL 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLP 177
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
L F + + LG G G+VYL+ +K A+KV+ K L AG + LR + E I
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE--IQSH 68
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALS 126
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP 384
Y H +I+RD+KPEN+L+ +G + ++DF S+ S +LD P
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLP 178
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F +++ LG G G+VYL+ K A+KV+ K+ L + + E EI L HP
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ +Y +F K L++EF P G+L+ QK G+ F EQ ++ E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GR-FDEQRSATFMEELADALHYCHER 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-------------AVSPTLIKASSLDAEP 384
+I+RD+KPEN+L+ G + ++DF S+ + P +I+ + D
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE-- 191
Query: 385 LRKNPVYCVQPACIEPSCIQPSCVTPT 411
K ++C C E P +P+
Sbjct: 192 --KVDLWCAGVLCYEFLVGMPPFDSPS 216
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
L+FP P +S ++DLI LL P RL K + +HP+
Sbjct: 228 DLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK----GVMEHPW 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F++ LG G VY +E T A+K++DK ++ + R Q E +I L HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ LY +FE + LV+E C G+++ + + K F E R ++ +++ + YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH 131
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPAC 397
GI++RDL N+L+ + +I ++DF L+ + + P K+ C P
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM-------------PHEKHYTLCGTPNY 178
Query: 398 IEP 400
I P
Sbjct: 179 ISP 181
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+ + GT Y++PEI HG D W+ G Y LL G+ PF + TL VV
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P +S A+DLI LL + P RL+ + + HPF
Sbjct: 228 DYEMP--SFLSIEAKDLIHQLLRRNPADRLS----LSSVLDHPFM 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F + + LG G G+VYL+ K A+KV+ K+ L + + E EI L HP
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ +Y +F K L++EF P G+L+ QK G+ F EQ ++ E+ AL Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GR-FDEQRSATFMEELADALHYCHER 134
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-------------AVSPTLIKASSLDAEP 384
+I+RD+KPEN+L+ G + ++DF S+ + P +I+ + D
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE-- 192
Query: 385 LRKNPVYCVQPACIEPSCIQPSCVTPT 411
K ++C C E P +P+
Sbjct: 193 --KVDLWCAGVLCYEFLVGMPPFDSPS 217
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 228
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
L+FP P +S ++DLI LL P RL K + +HP+
Sbjct: 229 DLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK----GVMEHPW 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F + + LG G G+VYL+ K A+KV+ K+ L + + E EI L HP
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ +Y +F K L++EF P G+L+ QK G+ F EQ ++ E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GR-FDEQRSATFMEELADALHYCHER 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-------------AVSPTLIKASSLDAEP 384
+I+RD+KPEN+L+ G + ++DF S+ + P +I+ + D
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE-- 191
Query: 385 LRKNPVYCVQPACIEPSCIQPSCVTPT 411
K ++C C E P +P+
Sbjct: 192 --KVDLWCAGVLCYEFLVGMPPFDSPS 216
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
L+FP P +S ++DLI LL P RL K + +HP+
Sbjct: 228 DLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK----GVMEHPW 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 131/335 (39%), Gaps = 90/335 (26%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK L+ME+ GG++ G+ E+ R +++ A++
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GR-MKEKEARSKFRQIVSAVQ 128
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S V LDA
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV------GGKLDA---------- 172
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C P +P LF K
Sbjct: 173 -------------FCGAPPYAAPELFQGK------------------------------- 188
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 189 ------KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 232
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATE 547
P +S +L++ LV P KRG E
Sbjct: 233 IP--FYMSTDCENLLKRFLVLNP-----IKRGTLE 260
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 129/326 (39%), Gaps = 85/326 (26%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A+K++DK L + +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK LVME+ GG++ G+ E+ R +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQ 127
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S + LDA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDA---------- 171
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C P +P LF K
Sbjct: 172 -------------FCGAPPYAAPELFQGK------------------------------- 187
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 188 ------KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHR 538
P +S +L++ L+ P R
Sbjct: 232 IP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 199 RWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRK 258
RW+ + +R + FR + LG G V L+E T+ A+K + K +L G++
Sbjct: 9 RWKQAEDIR------DIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE 60
Query: 259 KLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQ 318
+ + E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 61 GSM--ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 319 AVRFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 365
A R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT Y+APE++ + + AVD W+ G+ Y LL G PF N A LF + + +
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 516 SPV---VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
SP +S +A+D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 134/343 (39%), Gaps = 90/343 (26%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G V + T+ +A+KV++KAS A K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ E +V E GG+L K+ K F E + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH 140
Query: 338 GIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQ 394
I++RDLKPEN+L+ +D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 395 PACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF 454
TCF +++ K K+ IG PE++
Sbjct: 172 ----------------TCF---------QQNTKMKDRIGTAYYIAPEVLR---------- 196
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
GT++ D W+ G+ LY LL G PF G L V F
Sbjct: 197 -GTYD-------------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
P+ +S A+DLIR +L P R+ AT+ +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 130/335 (38%), Gaps = 90/335 (26%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKI 67
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK L+ME+ GG++ G+ E+ R +++ A++
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GR-MKEKEARSKFRQIVSAVQ 125
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S V L
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL------------------ 167
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C +P +P LF K
Sbjct: 168 -----------DTFCGSPPYAAPELFQGK------------------------------- 185
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 186 ------KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 229
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATE 547
P +S +L++ LV P KRG E
Sbjct: 230 IP--FYMSTDCENLLKRFLVLNP-----IKRGTLE 257
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 134/343 (39%), Gaps = 90/343 (26%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G V + T+ +A+KV++KAS A K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ E +V E GG+L K+ K F E + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH 140
Query: 338 GIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQ 394
I++RDLKPEN+L+ +D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 395 PACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF 454
TCF +++ K K+ IG PE++
Sbjct: 172 ----------------TCF---------QQNTKMKDRIGTAYYIAPEVLR---------- 196
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
GT++ D W+ G+ LY LL G PF G L V F
Sbjct: 197 -GTYD-------------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
P+ +S A+DLIR +L P R+ AT+ +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 199 RWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRK 258
RW+ + +R + FR + LG G V L+E T+ A+K + K +L G++
Sbjct: 9 RWKQAEDIR------DIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Query: 259 KLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQ 318
+ + E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 61 GSM--ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 319 AVRFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 365
A R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT Y+APE++ + + AVD W+ G+ Y LL G PF N A LF + + +
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 516 SPV---VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
SP +S +A+D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 134/343 (39%), Gaps = 90/343 (26%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G V + T+ +A+KV++KAS A K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ E +V E GG+L K+ K F E + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH 140
Query: 338 GIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQ 394
I++RDLKPEN+L+ +D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 395 PACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF 454
TCF +++ K K+ IG PE++
Sbjct: 172 ----------------TCF---------QQNTKMKDRIGTAYYIAPEVLR---------- 196
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
GT++ D W+ G+ LY LL G PF G L V F
Sbjct: 197 -GTYD-------------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
P+ +S A+DLIR +L P R+ AT+ +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 199 RWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRK 258
RW+ + +R + FR + LG G V L+E T+ A+K + K +L G++
Sbjct: 9 RWKQAEDIR------DIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Query: 259 KLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQ 318
+ + E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 61 GSM--ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 319 AVRFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 365
A R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT Y+APE++ + + AVD W+ G+ Y LL G PF N A LF + + +
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 516 SPV---VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
SP +S +A+D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 199 RWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRK 258
RW+ + +R + FR LG G V L+E T+ A+K + K +L G++
Sbjct: 9 RWKQAEDIR------DIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Query: 259 KLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQ 318
+ + E +L + HP + L +E+ L+M+ GG+L R + G Y
Sbjct: 61 GSM--ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERD 117
Query: 319 AVRFYVAEVLLALEYLHMLGIIYRDLKPENVL---VREDGHIMLSDFDLS 365
A R + +VL A++YLH LGI++RDLKPEN+L + ED IM+SDF LS
Sbjct: 118 ASRL-IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT Y+APE++ + + AVD W+ G+ Y LL G PF N A LF + + +
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 516 SPV---VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
SP +S +A+D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 129/326 (39%), Gaps = 85/326 (26%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A+K++DK L + +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK LVME+ GG++ G+ E+ R +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQ 127
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S + LD
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDT---------- 171
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C +P +P LF K
Sbjct: 172 -------------FCGSPPYAAPELFQGK------------------------------- 187
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE+ D W+ G+ LY L+ G PF G + V+ R
Sbjct: 188 ------KYDGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHR 538
P +S +L++ L+ P R
Sbjct: 232 IP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 129/326 (39%), Gaps = 85/326 (26%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A+K++DK L + +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK LVME+ GG++ G+ E+ R +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQ 127
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S + LD
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDT---------- 171
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C +P +P LF K
Sbjct: 172 -------------FCGSPPYAAPELFQGK------------------------------- 187
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE+ D W+ G+ LY L+ G PF G + V+ R
Sbjct: 188 ------KYDGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHR 538
P +S +L++ L+ P R
Sbjct: 232 IP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F + LG G V L+E T FA+K + K +L G++ + + E +L+ + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI--ENEIAVLRKIKHEN 81
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L +E+ LVM+ GG+L R + G ++ E+ + +VL A+ YLH +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFD-RIVEKG-FYTEKDASTLIRQVLDAVYYLHRM 139
Query: 338 GIIYRDLKPENVLVR---EDGHIMLSDFDLS 365
GI++RDLKPEN+L E+ IM+SDF LS
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF-- 513
GT Y+APE++ + + AVD W+ G+ Y LL G PF + ++ F
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
P +S +A+D IR L+ K+P R ++ A +HP+ G
Sbjct: 244 PYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREIL 270
L + ++RLLK +G G+ V L+ T A+K++DK L + +KL R E I+
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIM 60
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L+HP + L+ ETEK LVME+ GG++ + E+ R +++ A
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--WMKEKEARAKFRQIVSA 118
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++Y H I++RDLK EN+L+ D +I ++DF S
Sbjct: 119 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 453 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHR 538
R P +S +L++ L+ P R
Sbjct: 224 RIP--FYMSTDCENLLKKFLILNPSKR 248
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 129/326 (39%), Gaps = 85/326 (26%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A++++DK L + +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK LVME+ GG++ G+ E+ R +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQ 127
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S + LD
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDT---------- 171
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C +P +P LF K
Sbjct: 172 -------------FCGSPPYAAPELFQGK------------------------------- 187
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE+ D W+ G+ LY L+ G PF G + V+ R
Sbjct: 188 ------KYDGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHR 538
P +S +L++ L+ P R
Sbjct: 232 IP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 131/340 (38%), Gaps = 84/340 (24%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L ++ L + +G G V L+ T A+K+MDK +L L R +TE E L++L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLR 66
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
H + LY ET +V+E+CPGG+L Q E+ R +++ A+ Y+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYV 124
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQ 394
H G +RDLKPEN+L E + L DF L C +
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGL---------------------------CAK 157
Query: 395 PACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF 454
P + +Q C + +P L KS
Sbjct: 158 PKGNKDYHLQTCCGSLAYAAPELIQGKS-------------------------------- 185
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
YL GS D W+ GI LY L+ G PF A ++ P
Sbjct: 186 -----YL----------GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVP 230
Query: 515 ESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
+ +S ++ L++ +L +P+ R++ K + HP+
Sbjct: 231 KW--LSPSSILLLQQMLQVDPKKRISMK----NLLNHPWI 264
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 116/302 (38%), Gaps = 83/302 (27%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RL K +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK LVME+ GG++ G+ E+ R +++ A++
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQ 128
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S V L
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL------------------ 170
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C +P +P LF K
Sbjct: 171 -----------DTFCGSPPYAAPELFQGK------------------------------- 188
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 189 ------KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 232
Query: 513 FP 514
P
Sbjct: 233 IP 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 89/343 (25%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +++++K LG G G V L+ + T A+K+++K LA K ++ + EREI L+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 69
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L HP + LY +++ +V+E+ + Q+ EQ R + +++ A+E
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 126
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS--------------------------- 159
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
+ + ++ SC +P +P + S K
Sbjct: 160 --NIMTDGNFLKTSCGSPNYAAPEVISGKL------------------------------ 187
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
Y PE VD W+ G+ LY +L + PF N+
Sbjct: 188 -------YAGPE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 230
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
P+ +S A LI+ +L+ P +R++ EI Q +F+
Sbjct: 231 LPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFK 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 126/326 (38%), Gaps = 85/326 (26%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A+K++DK L + +KL R E I +
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIXKV 69
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK LV E+ GG++ G+ E+ R +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH-GRX-KEKEARAKFRQIVSAVQ 127
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLK EN+L+ D +I ++DF S + LDA
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADXNIKIADF------GFSNEFTFGNKLDA---------- 171
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
C P +P LF K
Sbjct: 172 -------------FCGAPPYAAPELFQGK------------------------------- 187
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+Y PE VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 188 ------KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHR 538
P S +L++ L+ P R
Sbjct: 232 IP--FYXSTDCENLLKKFLILNPSKR 255
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G VY ++ T A KV+D S ++L E +IL S DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 278 LPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ L F E +++EFC GG D L ++P E ++ + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
II+RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 450 RSMSFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 504
R SF+GT ++APE++ E + D W+ GI L E+ + P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 505 NVV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
+ +P + S +D ++ L K R +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWT----TSQLLQHPF 296
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 89/343 (25%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +++++K LG G G V L+ + T A+K+++K LA K ++ + EREI L+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 70
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L HP + LY +++ +V+E+ + Q+ EQ R + +++ A+E
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 127
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS--------------------------- 160
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
+ + ++ SC +P +P + S K
Sbjct: 161 --NIMTDGNFLKTSCGSPNYAAPEVISGKL------------------------------ 188
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
Y PE VD W+ G+ LY +L + PF N+
Sbjct: 189 -------YAGPE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 231
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
P+ +S A LI+ +L+ P +R++ EI Q +F+
Sbjct: 232 LPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFK 268
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G VY ++ T A KV+D S ++L E +IL S DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 278 LPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ L F E +++EFC GG D L ++P E ++ + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
II+RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 501
T R SF+GT ++APE++ E + D W+ GI L E+ + P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 502 TLFNVV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
L + +P + S +D ++ L K R +++ QHPF
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWT----TSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G VY ++ T A KV+D S ++L E +IL S DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 278 LPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ L F E +++EFC GG D L ++P E ++ + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
II+RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
Query: 450 RSMSFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 504
R F+GT ++APE++ E + D W+ GI L E+ + P L
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 505 NVV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
+ +P + S +D ++ L K R +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWT----TSQLLQHPF 296
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 214 GLS-HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
GLS ++ +K+LG G G V L + T A+K++ K+S+ E +L+
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLH---TLRQKQPGKYFPEQAVRFYVAEVLL 329
LDHP + LY FE ++ LVME GG+L LRQK F E + +VL
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLS 115
Query: 330 ALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVSPTL 374
YLH I++RDLKPEN+L+ D I + DF LS V +
Sbjct: 116 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM 163
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++ L V F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P+ VS A+ L++ +L EP R++ A E HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 214 GLS-HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
GLS ++ +K+LG G G V L + T A+K++ K+S+ E +L+
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLH---TLRQKQPGKYFPEQAVRFYVAEVLL 329
LDHP + LY FE ++ LVME GG+L LRQK F E + +VL
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLS 132
Query: 330 ALEYLHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLS 365
YLH I++RDLKPEN+L+ D I + DF LS
Sbjct: 133 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++ L V F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P+ VS A+ L++ +L EP R++ A E HP+
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 280
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 139/343 (40%), Gaps = 89/343 (25%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +++++K LG G G V L+ + T A+K+++K LA K ++ + EREI L+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 64
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L HP + LY +++ +V+E+ + Q+ EQ R + +++ A+E
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 121
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS--------------------------- 154
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
+ + ++ SC +P +P + S K
Sbjct: 155 --NIMTDGNFLKTSCGSPNYAAPEVISGKL------------------------------ 182
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
Y PE VD W+ G+ LY +L + PF N+
Sbjct: 183 -------YAGPE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 225
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
P+ +S A LI+ +L+ P +R++ EI Q +F+
Sbjct: 226 LPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFK 262
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 7/153 (4%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQS 272
+ ++RLLK +G G+ V L+ T A++++DK L + +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L+ ETEK LVME+ GG++ G+ E+ R +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GR-MKEKEARAKFRQIVSAVQ 127
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Y H I++RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 454 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHR 538
P +S +L++ L+ P R
Sbjct: 232 IP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 135/348 (38%), Gaps = 86/348 (24%)
Query: 209 RDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
DG + + H+ L LG G G V + E T A+K++++ + + + + E +
Sbjct: 4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ 63
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
L+ HP + LY T +VME+ GG+L K G+ +A R + ++L
Sbjct: 64 NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLF-QQIL 121
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKN 388
A++Y H +++RDLKPENVL+ + ++DF LS + D E LR
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-----------DGEFLR-- 168
Query: 389 PVYCVQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTE 448
SC P+ P S RL++
Sbjct: 169 -----------TSCGSPNYAAPEVISGRLYA----------------------------- 188
Query: 449 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV- 507
G VD W+ G+ LY LL G PF + TLF +
Sbjct: 189 -----------------------GPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIR 224
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
G PE S A L+ +L +P R K +I++H +F+
Sbjct: 225 GGVFYIPEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 135/348 (38%), Gaps = 86/348 (24%)
Query: 209 RDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
DG + + H+ L LG G G V + E T A+K++++ + + + + E +
Sbjct: 4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ 63
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
L+ HP + LY T +VME+ GG+L K G+ +A R + ++L
Sbjct: 64 NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLF-QQIL 121
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKN 388
A++Y H +++RDLKPENVL+ + ++DF LS + D E LR
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-----------DGEFLRD- 169
Query: 389 PVYCVQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTE 448
SC P+ P S RL++
Sbjct: 170 ------------SCGSPNYAAPEVISGRLYA----------------------------- 188
Query: 449 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV- 507
G VD W+ G+ LY LL G PF + TLF +
Sbjct: 189 -----------------------GPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIR 224
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
G PE S A L+ +L +P R K +I++H +F+
Sbjct: 225 GGVFYIPEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 124/321 (38%), Gaps = 86/321 (26%)
Query: 244 FAMKVMDKAS----LAGRKKLLRAQT--EREILQSLD-HPFLPTLYTHFETEKFSCLVME 296
+A+K++D A + LR T E +IL+ + HP + L +ET F LV +
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 297 FCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGH 356
G+L ++ E+ R + +L + LH L I++RDLKPEN+L+ +D +
Sbjct: 92 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 149
Query: 357 IMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIEPSCIQPSCVTPTCFSPR 416
I L+DF S C + P E LR+ C TP+ +P
Sbjct: 150 IKLTDFGFS--CQLDP---------GEKLRE------------------VCGTPSYLAPE 180
Query: 417 LFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVD 476
+ S D P G+G VD
Sbjct: 181 IIEC-SMNDNHP-----------------------------------------GYGKEVD 198
Query: 477 WWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF--PESPVVSFAARDLIRGLLVKE 534
W+ G+ +Y LL G PF L ++ +F PE S +DL+ LV +
Sbjct: 199 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 258
Query: 535 PQHRLAYKRGATEIKQHPFFE 555
PQ R A E HPFF+
Sbjct: 259 PQKRYT----AEEALAHPFFQ 275
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 139/343 (40%), Gaps = 89/343 (25%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +++++K LG G G V L+ + T A+K+++K LA K ++ + EREI L+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA--KSDMQGRIEREISYLRL 60
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L HP + LY +++ +V+E+ + Q+ EQ R + +++ A+E
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
Y H I++RDLKPEN+L+ E ++ ++DF LS
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS--------------------------- 150
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
+ + ++ SC +P +P + S K
Sbjct: 151 --NIMTDGNFLKTSCGSPNYAAPEVISGKL------------------------------ 178
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
Y PE+ D W+ G+ LY +L + PF N+
Sbjct: 179 -------YAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 221
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
P+ +S A LI+ +L+ P +R++ EI Q +F+
Sbjct: 222 LPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFK 258
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 124/321 (38%), Gaps = 86/321 (26%)
Query: 244 FAMKVMDKAS----LAGRKKLLRAQT--EREILQSLD-HPFLPTLYTHFETEKFSCLVME 296
+A+K++D A + LR T E +IL+ + HP + L +ET F LV +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 297 FCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGH 356
G+L ++ E+ R + +L + LH L I++RDLKPEN+L+ +D +
Sbjct: 105 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 357 IMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIEPSCIQPSCVTPTCFSPR 416
I L+DF S C + P E LR+ C TP+ +P
Sbjct: 163 IKLTDFGFS--CQLDP---------GEKLRE------------------VCGTPSYLAPE 193
Query: 417 LFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVD 476
+ S D P G+G VD
Sbjct: 194 IIEC-SMNDNHP-----------------------------------------GYGKEVD 211
Query: 477 WWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF--PESPVVSFAARDLIRGLLVKE 534
W+ G+ +Y LL G PF L ++ +F PE S +DL+ LV +
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 271
Query: 535 PQHRLAYKRGATEIKQHPFFE 555
PQ R A E HPFF+
Sbjct: 272 PQKRYT----AEEALAHPFFQ 288
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 123/321 (38%), Gaps = 86/321 (26%)
Query: 244 FAMKVMDKAS----LAGRKKLLRAQT--EREILQSLD-HPFLPTLYTHFETEKFSCLVME 296
+A+K++D A + LR T E +IL+ + HP + L +ET F LV +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 297 FCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGH 356
G+L ++ E+ R + +L + LH L I++RDLKPEN+L+ +D +
Sbjct: 105 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 357 IMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIEPSCIQPSCVTPTCFSPR 416
I L+DF S C + P E LR C TP+ +P
Sbjct: 163 IKLTDFGFS--CQLDP---------GEKLRS------------------VCGTPSYLAPE 193
Query: 417 LFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVD 476
+ S D P G+G VD
Sbjct: 194 IIEC-SMNDNHP-----------------------------------------GYGKEVD 211
Query: 477 WWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF--PESPVVSFAARDLIRGLLVKE 534
W+ G+ +Y LL G PF L ++ +F PE S +DL+ LV +
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 271
Query: 535 PQHRLAYKRGATEIKQHPFFE 555
PQ R A E HPFF+
Sbjct: 272 PQKRYT----AEEALAHPFFQ 288
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 227 GDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFE 286
GD G VY ++ T A KV+D S ++L E +IL S DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 287 TEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDL 344
E +++EFC GG D L ++P E ++ + L AL YLH II+RDL
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 345 KPENVLVREDGHIMLSDFDLSLR 367
K N+L DG I L+DF +S +
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAK 157
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 450 RSMSFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 504
R SF+GT ++APE++ E + D W+ GI L E+ + P L
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 505 NVV-GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
+ +P + S +D ++ L K R +++ QHPF
Sbjct: 225 KIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWT----TSQLLQHPF 270
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 28/176 (15%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL---AG--------------- 256
L+ + L +G G G V L+ Y+AMKV+ K L AG
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 257 -----RKKLLRAQTEREILQSLDHPFLPTLYTHFE--TEKFSCLVMEFCPGGDLHTLRQK 309
R + + E IL+ LDHP + L + E +V E G + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 310 QPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+P E RFY +++ +EYLH II+RD+KP N+LV EDGHI ++DF +S
Sbjct: 132 KP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 455 VGTHEYLAPEII---KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
VGT ++APE + + G A+D W G+ LY +FG+ PF + Q L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
FP+ P ++ +DLI +L K P+ R+ EIK HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKLHPW 295
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 139/348 (39%), Gaps = 88/348 (25%)
Query: 210 DGVLGLSHFRLLKRLGCGDIGSVYLS--ELSGTKCYFAMKVMDKASLAGRKKLLRAQTER 267
DG + + H+ L LG G G V + EL+G K A+K++++ + + + + E
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKV--AVKILNRQKIRSLDVVGKIRREI 67
Query: 268 EILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEV 327
+ L+ HP + LY T +VME+ GG+L K G+ +++ R + ++
Sbjct: 68 QNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN-GRLDEKESRRLF-QQI 125
Query: 328 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRK 387
L ++Y H +++RDLKPENVL+ + ++DF LS + D E LR
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-----------DGEFLRX 174
Query: 388 NPVYCVQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPT 447
SC P+ P S RL++
Sbjct: 175 -------------SCGSPNYAAPEVISGRLYA---------------------------- 193
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
G VD W+ G+ LY LL G PF + TLF +
Sbjct: 194 ------------------------GPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKI 228
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
+ F ++ + L++ +L +P R K +I++H +F+
Sbjct: 229 CDGI-FYTPQYLNPSVISLLKHMLQVDPMKRATIK----DIREHEWFK 271
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 206 VRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL-AGRKKLLRAQ 264
VR ++G +G S+F++ ++LG G G V L + A+KV+ K+ GR
Sbjct: 27 VRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 265 TER---------EILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYF 315
E+ +L+SLDHP + L+ FE +K+ LV EF GG+L Q F
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKF 143
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG---HIMLSDFDLS 365
E + ++L + YLH I++RD+KPEN+L+ +I + DF LS
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP--LR 512
+GT Y+APE++K + + D W+ G+ +Y LL G PF G ++ + V
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHR 538
F + +S A++LI+ +L + R
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 20/158 (12%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLA--GRKKLLRAQTEREILQSLDH 275
++ +K+LG G G V L T A+K++ K S++ KLL E +L+ LDH
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE---EVAVLKLLDH 95
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDL-----HTLRQKQPGKYFPEQAVRFYVAEVLLA 330
P + LY FE ++ LVME GG+L H ++ F E + +VL
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-------FNEVDAAVIIKQVLSG 148
Query: 331 LEYLHMLGIIYRDLKPENVLV---REDGHIMLSDFDLS 365
+ YLH I++RDLKPEN+L+ +D I + DF LS
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE+++ + + D W+ G+ L+ LL G PF G ++ L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
PE VS A+DLI+ +L + Q R++ A + +HP+ +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQALEHPWIK 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 221 LKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQSLDHPFL 278
L+++G G G L + + + +K ++ + ++ ++ R ++ RE+ L ++ HP +
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE---REESRREVAVLANMKHPNI 85
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
FE +VM++C GGDL Q G F E + + ++ LAL+++H
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK 145
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RD+K +N+ + +DG + L DF ++
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
+GT YL+PEI + + + + D W G LYEL K F+ + + ++ P
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-P 244
Query: 515 ESPVVSFAARDLIRGLLVKEPQHR 538
S S+ R L+ L + P+ R
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
++ L +G G G V ++ GT+ A K + K + + + R + E EI++SLDHP
Sbjct: 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHP 66
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ LY FE LVME C GG+L + + F E + +VL A+ Y H
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 337 LGIIYRDLKPENVLVRE---DGHIMLSDFDLSLR 367
L + +RDLKPEN L D + L DF L+ R
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
VGT Y++P++++G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 515 ESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
E VS A LIR LL K P+ R+ + + +H +FE
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFE 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 224 LGCGDIGSVYL--SELSGTKCYFAMKVMDKASL---AGRKKLLRAQTEREILQSLDHPFL 278
LG G G V L +++G +C A+KV+ K + ++ LLR E ++L+ LDHP +
Sbjct: 57 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 111
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
LY FE + + LV E GG+L + K F E + +VL + Y+H
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 339 IIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVSPTL 374
I++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLA 540
P+ VS +A+DLIR +L P R++
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRIS 298
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
++ L +G G G V ++ GT+ A K + K + + + R + E EI++SLDHP
Sbjct: 27 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHP 83
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ LY FE LVME C GG+L + + F E + +VL A+ Y H
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 337 LGIIYRDLKPENVLVRE---DGHIMLSDFDLSLR 367
L + +RDLKPEN L D + L DF L+ R
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
VGT Y++P++++G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 515 ESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
E VS A LIR LL K P+ R+ + + +H +FE
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFE 283
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 224 LGCGDIGSVYL--SELSGTKCYFAMKVMDKASL---AGRKKLLRAQTEREILQSLDHPFL 278
LG G G V L +++G +C A+KV+ K + ++ LLR E ++L+ LDHP +
Sbjct: 58 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 112
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
LY FE + + LV E GG+L + K F E + +VL + Y+H
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 339 IIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVSPTL 374
I++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLA 540
P+ VS +A+DLIR +L P R++
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRIS 299
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F ++ LG G V+L + T FA+K + K S A R L + E +L+ + H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK-SPAFRDSSL--ENEIAVLKKIKHEN 67
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ TL +E+ LVM+ GG+L R + G Y E+ + +VL A++YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFD-RILERGVY-TEKDASLVIQQVLSAVKYLHEN 125
Query: 338 GIIYRDLKPENVLV---REDGHIMLSDFDLS 365
GI++RDLKPEN+L E+ IM++DF LS
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT Y+APE++ + + AVD W+ G+ Y LL G PF + LF + + E
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY-EETESKLFEKIKEGYYEFE 227
Query: 516 SPV---VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATP 567
SP +S +A+D I LL K+P R ++ + HP+ +G N AL R P
Sbjct: 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F + LG G VY + GT+ +A+KV+ K KK++R TE +L L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVR--TEIGVLLRLSHPN 109
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L FET LV+E GG+L R + G Y+ E+ V ++L A+ YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFD-RIVEKG-YYSERDAADAVKQILEAVAYLHEN 167
Query: 338 GIIYRDLKPENVLVRE---DGHIMLSDFDLS 365
GI++RDLKPEN+L D + ++DF LS
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT Y APEI++G +G VD W+ GI Y LL G PF +F + +
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 516 SPV---VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
SP VS A+DL+R L+V +P+ RL + QHP+ G
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLT----TFQALQHPWVTG 311
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 224 LGCGDIGSVYL--SELSGTKCYFAMKVMDKASL---AGRKKLLRAQTEREILQSLDHPFL 278
LG G G V L +++G +C A+KV+ K + ++ LLR E ++L+ LDHP +
Sbjct: 34 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 88
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
LY FE + + LV E GG+L + K F E + +VL + Y+H
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 339 IIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVSPTL 374
I++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLA 540
P+ VS +A+DLIR +L P R++
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRIS 275
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 224 LGCGDIGSVYL--SELSGTKCYFAMKVMDKASL---AGRKKLLRAQTEREILQSLDHPFL 278
LG G G V L +++G +C A+KV+ K + ++ LLR E ++L+ LDHP +
Sbjct: 40 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 94
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
LY FE + + LV E GG+L + K F E + +VL + Y+H
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 339 IIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVSPTL 374
I++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLA 540
P+ VS +A+DLIR +L P R++
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRIS 281
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 224 LGCGDIGSVYL--SELSGTKCYFAMKVMDKASL---AGRKKLLRAQTEREILQSLDHPFL 278
LG G G V L +++G +C A+KV+ K + ++ LLR E ++L+ LDHP +
Sbjct: 34 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 88
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
LY FE + + LV E GG+L + K F E + +VL + Y H
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 339 IIYRDLKPENVLVR---EDGHIMLSDFDLSLRCAVS 371
I++RDLKPEN+L+ +D +I + DF LS S
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF- 513
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 514 -PESPVVSFAARDLIRGLLVKEPQHRLA 540
P+ VS +A+DLIR L P R++
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRIS 275
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G VY ++ T A KV++ S ++L E EIL + DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 69
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L + + +++EFCPGG + + + + E ++ ++L AL +LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
II+RDLK NVL+ +G I L+DF +S +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 453 SFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
SF+GT ++APE++ E + D W+ GI L E+ + P L +
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 227
Query: 508 GQ---PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN 558
L P V F RD ++ L K P+ R A ++ +HPF +
Sbjct: 228 KSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ ++ LG G G VY ++ T A KV++ S ++L E EIL + DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 77
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L + + +++EFCPGG + + + + E ++ ++L AL +LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
II+RDLK NVL+ +G I L+DF +S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 453 SFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
SF+GT ++APE++ E + D W+ GI L E+ + P L +
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 235
Query: 508 GQ---PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN 558
L P V F RD ++ L K P+ R A ++ +HPF +
Sbjct: 236 KSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R + GT +YL PE+I+G H VD W G+ YELL G PF+ + + T +V
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
L+FP S V A+DLI LL P RL ++ HP+
Sbjct: 237 DLKFPAS--VPTGAQDLISKLLRHNPSERLP----LAQVSAHPW 274
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F + + LG G G+VYL+ + A+KV+ K+ + + + E EI L HP
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ LY +F + L++E+ P G+L+ ++ Q F EQ + E+ AL Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEP---------LRKN 388
+I+RD+KPEN+L+ G + ++DF S+ +LD P K
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 389 PVYCVQPACIE 399
++C+ C E
Sbjct: 203 DLWCIGVLCYE 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA 263
+A+R G L++FR+ K++G G VY + A+K + L K
Sbjct: 20 KALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADC 79
Query: 264 QTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQ--KQPGKYFPEQAVR 321
E ++L+ L+HP + Y F + +V+E GDL + + K+ + PE+ V
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 322 FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLD 381
Y ++ ALE++H +++RD+KP NV + G + L DL L S A SL
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLG--DLGLGRFFSSKTTAAHSLV 197
Query: 382 AEPLRKNP 389
P +P
Sbjct: 198 GTPYYMSP 205
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 506
S VGT Y++PE I G+ D W+ G LYE+ ++PF G++ L+++
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF--YGDKMNLYSL 246
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEIXINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F ++LG G G V+L E + +K ++K + + + + E E+L+SLDHP
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPN 81
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ ++ FE +VME C GG+L + + GK E V + +++ AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 336 MLGIIYRDLKPENVLVREDG-H--IMLSDFDLS 365
++++DLKPEN+L ++ H I + DF L+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 424 KDRKPKNEIGNQVSP----------LPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGS 473
KD KP+N + SP L EL ++ S + GT Y+APE+ K +
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHSTNAAGTALYMAPEVFKRDV-TF 204
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSG-----NRATLFNVVGQPLRFPESPVVSFAARDLIR 528
D W+ G+ +Y LL G PF G+ +AT +P E ++ A DL++
Sbjct: 205 KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY----KEPNYAVECRPLTPQAVDLLK 260
Query: 529 GLLVKEPQHRLAYKRGATEIKQHPFFE 555
+L K+P+ R + A ++ H +F+
Sbjct: 261 QMLTKDPERRPS----AAQVLHHEWFK 283
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD--- 274
F L++ +G G G VY T A+KVMD + E EI Q ++
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----------VTGDEEEEIKQEINMLK 75
Query: 275 ----HPFLPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYV 324
H + T Y F + LVMEFC G + L + G E+ + +
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 325 AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+L L +LH +I+RD+K +NVL+ E+ + L DF +S
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKGSGNRA 501
T R +F+GT ++APE+I + + A D W+ GI E+ G P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
Query: 502 TLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
LF + P +S S + I LVK R A ++ +HPF
Sbjct: 242 ALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA----TEQLMKHPFI 290
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 425 DRKPKNEIGNQVSPLPEL----------IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSA 474
D KP+N + + + PL ++ I E R + +GT EYLAPEI+ + +A
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI--MGTPEYLAPEILNYDPITTA 213
Query: 475 VDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPV--VSFAARDLIRGLLV 532
D W GI Y LL +PF G N+ T N+ + + E VS A D I+ LLV
Sbjct: 214 TDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLV 273
Query: 533 KEPQHR 538
K P+ R
Sbjct: 274 KNPEKR 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 214 GLSHFRLL--KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAG--RKKLLRAQTEREI 269
++F +L K LG G V T +A K + K R ++L E+
Sbjct: 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLEL 84
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+S P + L+ +E L++E+ GG++ +L + + E V + ++L
Sbjct: 85 AKSC--PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED---GHIMLSDFDLSLR----CAVSPTLIKASSLDA 382
+ YLH I++ DLKP+N+L+ G I + DF +S + C + + L
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 383 EPLRKNPV 390
E L +P+
Sbjct: 203 EILNYDPI 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEIXINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-----------------AVSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 64
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 381 DAEPL 385
AEP+
Sbjct: 183 HAEPV 187
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEIXINKMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-----------------AVSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G Y TK FA KV+ K+ L + + TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE + F +V+E C L L +++ PE R+++ + + ++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P ++ A LIR +L +P R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-----------------AVSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G Y TK FA KV+ K+ L + + TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE + F +V+E C L L +++ PE R+++ + + ++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R + GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P ++ A LIR +L +P R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G Y TK FA KV+ K+ L + + TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE + F +V+E C L L +++ PE R+++ + + ++YLH +I+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P ++ A LIR +L +P R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G G V L+ T+ A+K + + L +R + E L+ L HP + LY
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
T +V+E+ G + +K K E R + +++ A+EY H I++RD
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 344 LKPENVLVREDGHIMLSDFDLS 365
LKPEN+L+ ++ ++ ++DF LS
Sbjct: 134 LKPENLLLDDNLNVKIADFGLS 155
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 456 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
G+ Y APE+I G+ + G VD W+ GI LY +L G+ PF LF V + +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF-IPNLFKKVNSCV-YV 226
Query: 515 ESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
+S A+ LIR ++V +P R+ + EI++ P+F
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRITIQ----EIRRDPWF 262
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINAMLNHEN 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSL-------------RCA----VSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ C V+P L+K
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 381 DAEPL 385
AEP+
Sbjct: 185 HAEPV 189
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-----------------AVSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G G V+ E + T A K++ + ++++ + E ++ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV---KNEISVMNQLDHANLIQLYD 153
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE++ LVME+ GG+L R E ++ ++ + ++H + I++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 344 LKPENVLV--REDGHIMLSDFDLSLR 367
LKPEN+L R+ I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 445 EPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 504
+P E ++F GT E+LAPE++ + D W+ G+ Y LL G +PF G + TL
Sbjct: 240 KPREKLKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN 298
Query: 505 NVVG--QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
N++ L E +S A++ I LL+KE R++ A+E +HP+
Sbjct: 299 NILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS----ASEALKHPWL 346
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ L++ LG G G V L+ T+ A+K++D + ++ E I + L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLNHEN 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y H L +E+C GG+L + +P PE + + +++ + YLH +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRC-----------------AVSPTLIKASSL 380
GI +RD+KPEN+L+ E ++ +SDF L+ V+P L+K
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 381 DAEPL 385
AEP+
Sbjct: 184 HAEPV 188
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G Y TK FA KV+ K+ L + + TE I +SLD+P + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE + F +V+E C L L +++ PE R+++ + + ++YLH +I+RD
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + +D + + DF L+ +
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATK 175
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P ++ A LIR +L +P R
Sbjct: 242 EYSVPRH--INPVASALIRRMLHADPTLR 268
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 126/349 (36%), Gaps = 104/349 (29%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL--QSLDH 275
+ L+K +G G+ G L + A+K ++ R + + +REI+ +SL H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + T +VME+ GG+L R G+ F E RF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQP 395
+ + +RDLK EN L LD P
Sbjct: 133 AMQVCHRDLKLENTL-----------------------------LDGSP----------- 152
Query: 396 ACIEPSCIQPSCVTPTCFSPRL------FSSKSKKDRKPKNEIGNQVSPLPELIAEPTEA 449
+PRL +S S +PK+ +G PE++
Sbjct: 153 ------------------APRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL------ 188
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG----SGNRATLFN 505
+K E G D W+ G+ LY +L G PF+ R T+
Sbjct: 189 ----------------LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
Query: 506 VVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
++ P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 233 ILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G + + TK FA K++ K+ L + + E I +SL H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE F +V+E C L L +++ K E R+Y+ +++L +YLH +I+RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + ED + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATK 190
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T +
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P+ ++ A LI+ +L +P R
Sbjct: 257 EYSIPKH--INPVAASLIQKMLQTDPTAR 283
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G + + TK FA K++ K+ L + + E I +SL H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE F +V+E C L L +++ K E R+Y+ +++L +YLH +I+RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + ED + + DF L+ +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATK 188
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T +
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P+ ++ A LI+ +L +P R
Sbjct: 255 EYSIPKH--INPVAASLIQKMLQTDPTAR 281
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G + + TK FA K++ K+ L + + E I +SL H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE F +V+E C L L +++ K E R+Y+ +++L +YLH +I+RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + ED + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATK 170
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T +
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P+ ++ A LI+ +L +P R
Sbjct: 237 EYSIPKH--INPVAASLIQKMLQTDPTAR 263
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G + + TK FA K++ K+ L + + E I +SL H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE F +V+E C L L +++ K E R+Y+ +++L +YLH +I+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P+ ++ A LI+ +L +P R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL--AGRKKLLRAQTEREILQSLDH 275
+ L +G G G V ++ + T+ A+K+M+K + K + R +TE +++ L H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGD----LHTLRQKQPGK------------------ 313
P + LY +E E++ CLVME C GG L+ GK
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 314 ----------------YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG-- 355
E+ + + ++ AL YLH GI +RD+KPEN L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207
Query: 356 HIMLSDFDLS 365
I L DF LS
Sbjct: 208 EIKLVDFGLS 217
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 456 GTHEYLAPEIIK--GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
GT ++APE++ E +G D W+ G+ L+ LL G PF G + T+ V+ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 514 --PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P V+S ARDL+ LL + R R QHP+
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL----QHPWI 334
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G + + TK FA K++ K+ L + + E I +SL H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE F +V+E C L L +++ K E R+Y+ +++L +YLH +I+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P+ ++ A LI+ +L +P R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
F + S A+D IR LLVK+P+ R+ + QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K + + R+ + R ERE IL+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGII 340
L+ +E + L++E GG+L ++ E+ ++ ++L + YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 341 YRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + I + DF L+
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L+++G G G V+ + T+ A+K++D + Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y + + ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RD+K NVL+ E G + L+DF ++ ++ T IK ++ P P Q A
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSA 180
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 506
T+ + +FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 507 VGQPLRFPESPVVSFAA--RDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P P + +++ ++ + L KEP +++ A E+ +H F
Sbjct: 217 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF--EGVNWALIRCATPP 568
F + S A+D IR LLVK+P+ R+ + QHP+ + AL R A+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKASAV 291
Query: 569 EIPK 572
+ K
Sbjct: 292 NMEK 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K + + R+ + R ERE IL+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGII 340
L+ +E + L++E GG+L ++ E+ ++ ++L + YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 341 YRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + I + DF L+
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L+R+G G G V+ + T+ A+K++D + Q E +L D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSSY 82
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y + ++ME+ GG L + P F E + + E+L L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSE 139
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RD+K NVL+ E G + L+DF ++ ++ T IK ++ P P Q A
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 506
T+ + +FVGT ++APE+I+ + S D W+ GI EL G+ P LF +
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
Query: 507 VGQPLRFPESPVVSFAA--RDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
P P + V F ++ I L K+P +++ A E+ +H F
Sbjct: 233 ---PKNNPPTLVGDFTKSFKEFIDACLNKDP----SFRPTAKELLKHKF 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L+++G G G V+ + T+ A+K++D + Q E +L D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 86
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y + + ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 143
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RD+K NVL+ E G + L+DF ++ ++ T IK ++ P P Q A
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSA 200
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 506
T+ + +FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
Query: 507 VGQPLRFPESPVVSFAA--RDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P P + +++ ++ + L KEP +++ A E+ +H F
Sbjct: 237 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 279
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 513 FPES--PVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN--WALIR 563
F E S A+D IR LLVKE + RL + E +HP+ V+ A++R
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDTQQAMVR 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K S A R+ + R + ERE IL+ + HP + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
L+ +E L++E GG+L L QK+ E+ ++ ++L + YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKKI 136
Query: 340 IYRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + HI L DF L+
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 7/179 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L R+G G G VY + TK A+K++D + Q E +L D P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 78
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ + + ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHSE 135
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RD+K NVL+ E G + L+DF ++ ++ T IK + P P Q A
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 493
T+ + FVGT ++APE+IK + D W+ GI EL G+ P
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 211 GVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI- 269
G + S + + +G G G+VY + + + A+K + + G L T RE+
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 270 ----LQSLDHPFLPTLYTHFETEKFS-----CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
L++ +HP + L T + LV E DL T K P P + +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTLIK 376
+ + + L L++LH I++RDLKPEN+LV G + L+DF L S + A++P ++
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVT 182
Query: 377 --------------ASSLD--------AEPLRKNPVYC 392
A+ +D AE R+ P++C
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 220
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
V T Y APE++ + + VD W+ G E+ K F G+ L F+++G P
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L+++G G G V+ + T+ A+K++D + Q E +L D P+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 81
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y + + ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 138
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RD+K NVL+ E G + L+DF ++ ++ T IK + P P Q A
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 506
T+ + FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 172 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
Query: 507 VGQPLRFPESPVVSFAA--RDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P P + +++ ++ + L KEP +++ A E+ +H F
Sbjct: 232 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 274
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G + + TK FA K++ K+ L + + E I +SL H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRD 343
FE F +V+E C L L +++ K E R+Y+ +++L +YLH +I+RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 344 LKPENVLVREDGHIMLSDFDLSLR 367
LK N+ + ED + + DF L+ +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATK 164
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T +
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHR 538
P+ ++ A LI+ +L +P R
Sbjct: 231 EYSIPKH--INPVAASLIQKMLQTDPTAR 257
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F +L++LG G GSVY + T A+K + S L E I+Q D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPH 85
Query: 278 LPTLYTHFETEKFSCLVMEFCPGG---DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
+ Y + +VME+C G D+ LR K E + + L LEYL
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQSTLKGLEYL 141
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
H + I+RD+K N+L+ +GH L+DF ++
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 449 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVG 508
A+ +GT ++APE+I+ G+ D W+ GI E+ GK P+ +F +
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 509 QP---LRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
P R PE +F D ++ LVK P+ R AT++ QHPF
Sbjct: 240 NPPPTFRKPELWSDNFT--DFVKQCLVKSPEQRAT----ATQLLQHPF 281
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAG-RKKLLRAQTERE--ILQSL 273
H+ + + LG G V GT +A K + K L+ R+ + R + ERE IL+ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
HP + TL+ FE + L++E GG+L ++ E ++ ++L + Y
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 123
Query: 334 LHMLGIIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSL 380
LH I + DLKPEN+++ + I L DF ++ + +P + +
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 381 DAEPL 385
+ EPL
Sbjct: 184 NYEPL 188
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 443 IAEPTEARS--MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 500
IA EA + + GT E++APEI+ E G D W+ G+ Y LL G +PF G +
Sbjct: 158 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 217
Query: 501 ATLFNVVGQPLRFPESPV--VSFAARDLIRGLLVKEPQHRLA 540
TL N+ F E S A+D IR LLVK+P+ R+
Sbjct: 218 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMT 259
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLS 365
I + DLKPEN+++ + I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L+++G G G V+ + T+ A+K++D + Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 66
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ Y + + ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RD+K NVL+ E G + L+DF ++ ++ T IK + P P Q A
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 447 TEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 506
T+ + FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 507 VGQPLRFPESPVVSFAA--RDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P P + +++ ++ + L KEP +++ A E+ +H F
Sbjct: 217 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 208 ARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTER 267
A D VL + L + +G G V T FA+K++D A L +R
Sbjct: 16 ADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 268 E--ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFY 323
E I L HP + L + ++ +V EF G DL +++ G + E Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 324 VAEVLLALEYLHMLGIIYRDLKPENVLV---REDGHIMLSDFDLSLRCAVS 371
+ ++L AL Y H II+RD+KPENVL+ + L DF ++++ S
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES 186
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
VGT ++APE++K E +G VD W G+ L+ LL G PF G+ R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 515 -ESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKP 573
+ +S +A+DL+R +L+ +P R+ E HP+ + + R A +P+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 305
Query: 574 VE 575
VE
Sbjct: 306 VE 307
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L+ E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASL-AGRKKLLRAQTERE--ILQSL 273
H+ + + LG G V GT +A K + K L + R+ + R + ERE IL+ +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
HP + TL+ FE + L++E GG+L ++ E ++ ++L + Y
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 144
Query: 334 LHMLGIIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSL 380
LH I + DLKPEN+++ + I L DF ++ + +P + +
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 381 DAEPL 385
+ EPL
Sbjct: 205 NYEPL 209
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 443 IAEPTEARS--MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 500
IA EA + + GT E++APEI+ E G D W+ G+ Y LL G +PF G +
Sbjct: 179 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 238
Query: 501 ATLFNVVGQPLRFPESPV--VSFAARDLIRGLLVKEPQHRL 539
TL N+ F E S A+D IR LLVK+P+ R+
Sbjct: 239 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 279
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 513 FPES--PVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN--WALIR 563
F E S A+D IR LLVKE + RL + E +HP+ V+ A++R
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K S A R+ + R + ERE IL+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
L+ +E L++E GG+L L QK+ E+ ++ ++L + YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKKI 136
Query: 340 IYRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + HI L DF L+
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAG-RKKLLRAQTERE--ILQSL 273
H+ + + LG G V GT +A K + K L+ R+ + R + ERE IL+ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
HP + TL+ FE + L++E GG+L ++ E ++ ++L + Y
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 130
Query: 334 LHMLGIIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSL 380
LH I + DLKPEN+++ + I L DF ++ + +P + +
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 190
Query: 381 DAEPL 385
+ EPL
Sbjct: 191 NYEPL 195
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 443 IAEPTEARS--MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 500
IA EA + + GT E++APEI+ E G D W+ G+ Y LL G +PF G +
Sbjct: 165 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 224
Query: 501 ATLFNVVGQPLRFPESPV--VSFAARDLIRGLLVKEPQHRL 539
TL N+ F E S A+D IR LLVK+P+ R+
Sbjct: 225 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F + S A+D IR LLVK+P+ R+ + QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K + + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
TL+ +E + L++E GG+L ++ E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 339 IIYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTLIKASSLDAEPL 385
I + DLKPEN+++ + I + DF L+ + +P + ++ EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 513 FPES--PVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN 558
F E S A+D IR LLVKE + RL + E +HP+ V+
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVD 280
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K S A R+ + R + ERE IL+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
L+ +E L++E GG+L L QK+ E+ ++ ++L + YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKKI 136
Query: 340 IYRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + HI L DF L+
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 516 SPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN--WALIR 563
S A+D IR LLVKE + RL + E +HP+ V+ A++R
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K S A R+ + R + ERE IL+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
L+ +E L++E GG+L L QK+ E+ ++ ++L + YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKKI 136
Query: 340 IYRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + HI L DF L+
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 141/342 (41%), Gaps = 58/342 (16%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ + L+++G G G+V+ ++ T A+K + L + + + REI L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKE 57
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L H + L+ ++K LV EFC DL G PE V+ ++ ++L L
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPE-IVKSFLFQLLKGLG 115
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
+ H +++RDLKP+N+L+ +G + L+DF L+ + ++ S + L P
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP---VRCYSAEVVTLWYRPPDV 172
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
+ A + + I + C L + + + P N++ +Q+ + L+ PTE +
Sbjct: 173 LFGAKLYSTSI--DMWSAGCIFAEL--ANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
S +Y P+ +L NVV
Sbjct: 229 SMTKLPDY-------------------------------KPYPMYPATTSLVNVV----- 252
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P ++ RDL++ LL P R++ A E QHP+F
Sbjct: 253 ----PKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYF 286
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN--WALIR 563
F E S A+D IR LLVKE + RL + E +HP+ V+ A++R
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTERE--ILQSLDHPFL 278
+ LG G V T +A K + K S A R+ + R + ERE IL+ + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
TL+ +E L++E GG+L L QK+ E+ ++ ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 338 GIIYRDLKPENVLVREDG----HIMLSDFDLS 365
I + DLKPEN+++ + HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 516 SPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN 558
S A+D IR LLVKE + RL + E +HP+ V+
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVD 280
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K S A R+ + R + ERE IL+ + H + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
L+ +E L++E GG+L L QK+ E+ ++ ++L + YLH I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTKKI 136
Query: 340 IYRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + HI L DF L+
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
+ GT ++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 513 FPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
F + S A+D IR LLVK+P+ R+ + QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE--ILQSLDHPFLPT 280
LG G V T +A K + K + + R+ + R ERE IL+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGII 340
L+ +E + L++E GG+L ++ E+ ++ ++L + YLH L I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 341 YRDLKPENVLVREDG----HIMLSDFDLS 365
+ DLKPEN+++ + I + DF L+
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 216 SHFRLLKR-LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
+H LL LG G +V+ T FA+KV + S + + E E+L+ L+
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN 65
Query: 275 HPFLPTLYTHFE--TEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLAL 331
H + L+ E T + L+MEFCP G L+T+ ++ Y PE + +V+ +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 332 EYLHMLGIIYRDLKPENVL--VREDGHIM--LSDF 362
+L GI++R++KP N++ + EDG + L+DF
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 17/89 (19%)
Query: 424 KDRKPKN------EIGNQVSPLPELIAEPTEARSMSFV---GTHEYLAPEIIK------- 467
++ KP N E G V L + A FV GT EYL P++ +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKD 195
Query: 468 -GEGHGSAVDWWTFGIFLYELLFGKTPFK 495
+ +G+ VD W+ G+ Y G PF+
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
++ + + LG G V T FA K+++ L+ R + + E I + L HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 88
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ L+ + E F LV + GG+L +++ E + ++L ++ Y H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 337 LGIIYRDLKPENVLVREDGH---IMLSDFDLSL 366
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 514 --PESPVVSFAARDLIRGLLVKEPQHRL 539
PE V+ A+ LI +L P+ R+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 216 SHFRLLKR-LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
+H LL LG G +V+ T FA+KV + S + + E E+L+ L+
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN 65
Query: 275 HPFLPTLYTHFE--TEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLAL 331
H + L+ E T + L+MEFCP G L+T+ ++ Y PE + +V+ +
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 332 EYLHMLGIIYRDLKPENVL--VREDGHIM--LSDF 362
+L GI++R++KP N++ + EDG + L+DF
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 452 MSFVGTHEYLAPEIIK--------GEGHGSAVDWWTFGIFLYELLFGKTPFK 495
+S GT EYL P++ + + +G+ VD W+ G+ Y G PF+
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 58/342 (16%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ + L+++G G G+V+ ++ T A+K + L + + + REI L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKE 57
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L H + L+ ++K LV EFC DL G PE V+ ++ ++L L
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPE-IVKSFLFQLLKGLG 115
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYC 392
+ H +++RDLKP+N+L+ +G + L++F L+ + ++ S + L P
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---VRCYSAEVVTLWYRPPDV 172
Query: 393 VQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSM 452
+ A + + I + C L + + + P N++ +Q+ + L+ PTE +
Sbjct: 173 LFGAKLYSTSI--DMWSAGCIFAEL--ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
S +Y P+ +L NVV
Sbjct: 229 SMTKLPDY-------------------------------KPYPMYPATTSLVNVV----- 252
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P ++ RDL++ LL P R++ A E QHP+F
Sbjct: 253 ----PKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYF 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGR--KKLLRAQTEREILQSLDH 275
++L + LG G V T +A K+++ L+ R +KL R E I + L H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRLLKH 62
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + L+ E F LV + GG+L +Y+ E + ++L ++ + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 336 MLGIIYRDLKPENVLV---REDGHIMLSDFDLSL 366
+ GI++RDLKPEN+L+ + + L+DF L++
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 452 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
Query: 512 RF--PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
F PE V+ A+DLI +L P R+ A+E +HP+
Sbjct: 224 DFPSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHPWI 264
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
T E+ APEI+ E G D W G+ Y LL G +PF G + TL NV F E
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271
Query: 516 SPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEG 556
VS A+D I+ LL KEP+ RL + +HP+ +G
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKG 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA 263
Q V + G + ++ +L+ LG G G V+ T F K ++ + +
Sbjct: 40 QPVEVKQGSV-YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV--- 95
Query: 264 QTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFY 323
+ E I+ L HP L L+ FE + L++EF GG+L + K E V Y
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINY 154
Query: 324 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-LIKASSLDA 382
+ + L+++H I++ D+KPEN++ + D L ++P ++K ++ A
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA 214
Query: 383 E 383
E
Sbjct: 215 E 215
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
++ + + LG G V T FA K+++ L+ R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ L+ + E F LV + GG+L +++ E + ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 337 LGIIYRDLKPENVLVREDGH---IMLSDFDLSL 366
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 514 --PESPVVSFAARDLIRGLLVKEPQHRL 539
PE V+ A+ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
++ + + LG G V T FA K+++ L+ R + + E I + L HP
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 64
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ L+ + E F LV + GG+L +++ E + ++L ++ Y H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 337 LGIIYRDLKPENVLVREDGH---IMLSDFDLSL 366
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 514 --PESPVVSFAARDLIRGLLVKEPQHRL 539
PE V+ A+ LI +L P+ R+
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 244 FAMKVMD-KASLAGRKKL--LRAQTERE---ILQSLDHPFLPTLYTHFETEKFSCLVMEF 297
FA+K+M+ A ++L +R T RE + Q HP + TL +E+ F LV +
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL 181
Query: 298 CPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHI 357
G+L ++ E+ R + +L A+ +LH I++RDLKPEN+L+ ++ I
Sbjct: 182 MRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQI 239
Query: 358 MLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIEPSCIQPS 406
LSDF S C + P E LR+ C P + P ++ S
Sbjct: 240 RLSDFGFS--CHLEP---------GEKLRE---LCGTPGYLAPEILKCS 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 456 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
GT YLAPEI+K G+G VD W G+ L+ LL G PF L ++
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 510 PLRF--PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
+F PE S +DLI LL +P+ RL A + QHPFFE
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFE 364
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
++ + + LG G V T FA K+++ L+ R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ L+ + E F LV + GG+L +++ E + ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 337 LGIIYRDLKPENVLVREDGH---IMLSDFDLSL 366
GI++R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
F GT YL+PE++K + + VD W G+ LY LL G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 514 --PESPVVSFAARDLIRGLLVKEPQHRL 539
PE V+ A+ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S F+ L++LG G +VY T Y A+K + S G A E +++ L H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS--TAIREISLMKELKH 62
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG---KYFPEQAVRFYVAEVLLALE 332
+ LY TE LV EF + + G + V+++ ++L L
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H I++RDLKP+N+L+ + G + L DF L+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSM--------SFVGTHEYLAPEIIKG-EGHGSA 474
+D KP+N + N+ L + + AR+ S V T Y AP+++ G + ++
Sbjct: 132 RDLKPQNLLINKRGQLK--LGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTS 189
Query: 475 VDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
+D W+ G L E++ GK F G+ + L F+++G P
Sbjct: 190 IDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTP 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
++L + LG G V T +A K+++ L+ R + + E I + L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 64
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ E F LV + GG+L +Y+ E + ++L ++ + H+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 338 GIIYRDLKPENVLV---REDGHIMLSDFDLSL 366
GI++RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 452 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
Query: 512 RF--PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
F PE V+ A+DLI +L P R+ A+E +HP+
Sbjct: 224 DFPSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHPWI 264
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--- 269
+ S + + +G G G+VY + + + A+K + ++ L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 270 --LQSLDHPFLPTLYTHFETEKFS-----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
L++ +HP + L T + LV E DL T K P P + ++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTLIK-- 376
+ + L L++LH I++RDLKPEN+LV G + L+DF L S + A++P ++
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLW 176
Query: 377 ------------ASSLD--------AEPLRKNPVYC 392
A+ +D AE R+ P++C
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
V T Y APE++ + + VD W+ G E+ K F G+ L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 199 RWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGR 257
R EA + + G L F + LG G+ G V+ + A K++ + A R
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 110
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPE 317
+++R E ++L + P++ Y F ++ + ME GG L + +K PE
Sbjct: 111 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPE 165
Query: 318 QAVRFYVAEVLLALEYL-HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Q + V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 166 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 448 EARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 494
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 219 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S F + LG G G V + + Y+A+K + +KL +E +L SL+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNH 61
Query: 276 PFLPTLYTHF-----------ETEKFSCLV--MEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
++ Y + +K S L ME+C G L+ L + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASS 379
+ ++L AL Y+H GII+RDLKP N+ + E ++ + DF L+ S ++K S
Sbjct: 122 F-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 453 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 504
S +GT Y+A E++ G GH +D ++ GI +E+++ PF R +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL 238
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 221 LKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQSLDHPFL 278
L LG G +VY + T A+K + + K + REI LQ L HP +
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
L F + LV +F DL + + P ++ Y+ L LEYLH
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSH-IKAYMLMTLQGLEYLHQHW 132
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RDLKP N+L+ E+G + L+DF L+
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLA 159
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 424 KDRKPKNEI--GNQVSPLPEL-----IAEPTEARSMSFVGTHEYLAPEIIKG-EGHGSAV 475
+D KP N + N V L + P A V T Y APE++ G +G V
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGARMYGVGV 194
Query: 476 DWWTFGIFLYELLFGKTPF 494
D W G L ELL + PF
Sbjct: 195 DMWAVGCILAELLL-RVPF 212
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L H+ + + LG G G V+ T FA K + + ++ + + E + + L
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR 212
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HP L L+ FE + ++ EF GG+L + K ++AV Y+ +V L ++
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHM 271
Query: 335 HMLGIIYRDLKPENVL--VREDGHIMLSDFDLS 365
H ++ DLKPEN++ + + L DF L+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 515 ESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
+S +S +D IR LL+ +P R+ + +HP+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 414
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 214 GLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQ 271
G+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L H+ + + LG G G V+ T FA K + + ++ + + E + + L
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR 106
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HP L L+ FE + ++ EF GG+L + K ++AV Y+ +V L ++
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHM 165
Query: 335 HMLGIIYRDLKPENVL--VREDGHIMLSDFDLS 365
H ++ DLKPEN++ + + L DF L+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 515 ESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
+S +S +D IR LL+ +P R+ + +HP+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 308
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 40/216 (18%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--- 269
+ S + + +G G G+VY + + + A+K + ++ L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 270 --LQSLDHPFLPTLYTHFETEKFS-----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
L++ +HP + L T + LV E DL T K P P + ++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTLIK-- 376
+ + L L++LH I++RDLKPEN+LV G + L+DF L S + A+ P ++
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLW 176
Query: 377 ------------ASSLD--------AEPLRKNPVYC 392
A+ +D AE R+ P++C
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
V T Y APE++ + + VD W+ G E+ K F G+ L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL T P ++ Y+ ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 122 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 291
Query: 556 GVN 558
V
Sbjct: 292 DVT 294
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 244 FAMKVMDKASLAGRKKLLRAQTE--------REI--LQSLDHPFLPTLYTHFETEKFSCL 293
F + D + KK L ++ + REI L+ L HP L L F ++ L
Sbjct: 20 FKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79
Query: 294 VMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVRE 353
V E+C LH L + Q G PE V+ + L A+ + H I+RD+KPEN+L+ +
Sbjct: 80 VFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK 137
Query: 354 DGHIMLSDFDLS 365
I L DF +
Sbjct: 138 HSVIKLCDFGFA 149
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 34/133 (25%)
Query: 455 VGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGSGN-------RATLFNV 506
V T Y +PE++ G+ +G VD W G ELL G + G + R TL ++
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 507 V--------------GQPLRFPES--------PVVSFAARDLIRGLLVKEPQHRLAYKRG 544
+ G + PE P +S+ A L++G L +P RL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT---- 278
Query: 545 ATEIKQHPFFEGV 557
++ HP+FE +
Sbjct: 279 CEQLLHHPYFENI 291
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPV 518
EY APE+ + + +A D W+ G +Y LL G PF N+ + N++ F E
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 519 --VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF----EGVNWALIR 563
+S A D + LLVKE + R+ A+E QHP+ E V+ +IR
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQKIERVSTKVIR 274
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 218 FRLLKRLGCGDIGSVY-LSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+ + + LG G+ G V+ E S K Y A V K G ++L + E IL H
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVL-VKKEISILNIARHR 61
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ L+ FE+ + ++ EF G D+ R E+ + YV +V AL++LH
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFE-RINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 337 LGIIYRDLKPENVL 350
I + D++PEN++
Sbjct: 121 HNIGHFDIRPENII 134
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL-LRAQTEREILQSLDHP 276
+ L + LG G + V+L+ A+KV+ +A LA LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 277 FLPTLYTHFETEK----FSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
+ +Y E E +VME+ G L + + G P++A+ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ H GII+RD+KP N+L+ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 510 PLRFPESPVVSFAARD--------LIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL 561
+R E P+ A + ++ L K P++R + A E++ +
Sbjct: 231 HVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVR 278
Query: 562 IRCATPPEIPKPV-EIERIPAPTSSTSEKTAP 592
+ PPE PK + + ER +S+ + P
Sbjct: 279 VHNGEPPEAPKVLTDAERTSLLSSAAGNLSGP 310
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 122 CHSHRVLH----RDLKPENLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 291
Query: 556 GVN 558
V
Sbjct: 292 DVT 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 120 CHSHRVLH----RDLKPENLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 289
Query: 556 GVN 558
V
Sbjct: 290 DVT 292
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 121 CHSHRVLH----RDLKPENLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 290
Query: 556 GVN 558
V
Sbjct: 291 DVT 293
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 33/145 (22%)
Query: 456 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKGS------------- 497
G+ EY+APE+++ +++ D W+ G+ LY LL G PF G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 498 -GNRATLFNVVGQ-PLRFPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
+ LF + + FP+ +S AA+DLI LLV++ + RL+ A ++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 554 FEGVNWALIRCATPPEIPKPVEIER 578
+G CA +P P+ ++R
Sbjct: 299 VQG-------CAPENTLPTPMVLQR 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 244 FAMKVMDKASLAGRKKLLRAQTEREIL-QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGD 302
+A+K+++K R ++ R E E+L Q H + L FE E LV E GG
Sbjct: 41 YAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 303 LHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGH---IML 359
+ + K+ ++F E V +V AL++LH GI +RDLKPEN+L + +
Sbjct: 98 ILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 360 SDFDL 364
DFDL
Sbjct: 156 CDFDL 160
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
+ ++ L+++G G G VY ++ S + ++ A G A E +L+ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPS--TAIREISLLKELH 77
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HP + +L +E+ LV EF L + + G + ++ Y+ ++L + +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHC 135
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
H I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 43/172 (25%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAPEIIKG-EGHGSA 474
+D KP+N + N L +A+ AR+ THE Y AP+++ G + + ++
Sbjct: 143 RDLKPQNLLINSDGALK--LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 475 VDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP-------------------LR 512
VD W+ G E++ GK F G + L F+++G P
Sbjct: 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQV 260
Query: 513 FPESPVVSFA------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN 558
F + P S DL+ +L +P R++ A + HP+F+ ++
Sbjct: 261 FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS----ARDAMNHPYFKDLD 308
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 28/202 (13%)
Query: 224 LGCGDIGSVY--LSELSGTKCYFAMKVMDKAS-LAGRKKLLRAQTEREILQSLDHPFLPT 280
LGCG+ GSV + + + A+KV+ + + A ++++R E +I+ LD+P++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIVR 74
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGII 340
L + E LVME GG LH + + P V + +V + ++YL +
Sbjct: 75 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 341 YRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIEP 400
+RDL NVL+ + +SDF LS + A S PL+
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-------------- 178
Query: 401 SCIQPSCVTPTCFSPRLFSSKS 422
P C + R FSS+S
Sbjct: 179 ------WYAPECINFRKFSSRS 194
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFK 495
++ APE I S D W++G+ ++E L +G+ P+K
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 120 CHSHRVLH----RDLKPENLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 289
Query: 556 GVN 558
V
Sbjct: 290 DVT 292
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
+ ++ L+++G G G VY ++ S + ++ A G A E +L+ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPS--TAIREISLLKELH 77
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HP + +L +E+ LV EF L + + G + ++ Y+ ++L + +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHC 135
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
H I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 43/172 (25%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAPEIIKG-EGHGSA 474
+D KP+N + N L +A+ AR+ THE Y AP+++ G + + ++
Sbjct: 143 RDLKPQNLLINSDGALK--LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 475 VDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP-------------------LR 512
VD W+ G E++ GK F G + L F+++G P
Sbjct: 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQV 260
Query: 513 FPESPVVSFA------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVN 558
F + P S DL+ +L +P R++ A + HP+F+ ++
Sbjct: 261 FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS----ARDAMNHPYFKDLD 308
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 40/216 (18%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--- 269
+ S + + +G G G+VY + + + A+K + ++ L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 270 --LQSLDHPFLPTLYTHFETEKFS-----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
L++ +HP + L T + LV E DL T K P P + ++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTLIK-- 376
+ + L L++LH I++RDLKPEN+LV G + L+DF L S + A+ P ++
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLW 176
Query: 377 ------------ASSLD--------AEPLRKNPVYC 392
A+ +D AE R+ P++C
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
V T Y APE++ + + VD W+ G E+ K F G+ L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 33/145 (22%)
Query: 456 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKGS------------- 497
G+ EY+APE+++ +++ D W+ G+ LY LL G PF G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 498 -GNRATLFNVVGQ-PLRFPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
+ LF + + FP+ +S AA+DLI LLV++ + RL+ A ++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 554 FEGVNWALIRCATPPEIPKPVEIER 578
+G CA +P P+ ++R
Sbjct: 299 VQG-------CAPENTLPTPMVLQR 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 244 FAMKVMDKASLAGRKKLLRAQTEREIL-QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGD 302
+A+K+++K R ++ R E E+L Q H + L FE E LV E GG
Sbjct: 41 YAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 303 LHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGH---IML 359
+ + K+ ++F E V +V AL++LH GI +RDLKPEN+L + +
Sbjct: 98 ILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 360 SDFDL 364
DF L
Sbjct: 156 CDFGL 160
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL-LRAQTEREILQSLDHP 276
+ L + LG G + V+L+ A+KV+ +A LA LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 277 FLPTLYTHFETEK----FSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
+ +Y E E +VME+ G L + + G P++A+ +A+ AL
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ H GII+RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 510 PLRFPESPVVSFAARD--------LIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL 561
+R E P+ A + ++ L K P++R + A E++ +
Sbjct: 231 HVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVR 278
Query: 562 IRCATPPEIPKPV-EIERIPAPTSSTSEKTAP 592
+ PPE PK + + ER +S+ + P
Sbjct: 279 VHNGEPPEAPKVLTDAERTSLLSSAAGNLSGP 310
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 119 CHSHRVLH----RDLKPENLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL-LRAQTEREILQSLDHP 276
+ L + LG G + V+L+ A+KV+ +A LA LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 277 FLPTLYTHFETEK----FSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
+ +Y E E +VME+ G L + + G P++A+ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ H GII+RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G + + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 510 PLRFPESPVVSFAARDL---IRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCAT 566
P + +A DL + L K P++R + A E++ + +
Sbjct: 235 DPIPPSARHEGLSA-DLDAVVLKALAKNPENRY---QTAAEMR-------ADLVRVHNGE 283
Query: 567 PPEIPKPV-EIERIPAPTSSTSEKTAP 592
PPE PK + + ER +S+ + P
Sbjct: 284 PPEAPKVLTDAERTSLLSSAAGNLSGP 310
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTERE-------ILQSLDH 275
++G G G V ++ + + A+K MD LR Q RE I++ H
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMD----------LRKQQRRELLFNEVVIMRDYQH 207
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ +Y + +VMEF GG L + E+ + VL AL LH
Sbjct: 208 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLH 264
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDF 362
G+I+RD+K +++L+ DG + LSDF
Sbjct: 265 AQGVIHRDIKSDSILLTHDGRVKLSDF 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSGNRATLFNVVG 508
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P R VS + + + LLV++P R A E+ +HPF
Sbjct: 363 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFL 404
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL-LRAQTEREILQSLDHP 276
+ L + LG G + V+L+ A+KV+ +A LA LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 277 FLPTLYTHFETEK----FSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
+ +Y E E +VME+ G L + + G P++A+ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ H GII+RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 510 PLRFPESPVVSFAARD--------LIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL 561
+R E P+ A + ++ L K P++R + A E++ +
Sbjct: 231 HVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVR 278
Query: 562 IRCATPPEIPKPV-EIERIPAPTSSTSEKTAP 592
+ PPE PK + + ER +S+ + P
Sbjct: 279 VHNGEPPEAPKVLTDAERTSLLSSAAGNLSGP 310
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
++G G G V ++ T A+K MD R+ L E I++ H + +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF---NEVVIMRDYHHDNVVDMY 108
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ + +VMEF GG L + E+ + VL AL YLH G+I+R
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 343 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTLIKASSLDAEPLRKNP 389
D+K +++L+ DG I LSDF CA VS + K L P P
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGF---CAQVSKEVPKRKXLVGTPYWMAP 210
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ-PLR 512
VGT ++APE+I +G+ VD W+ GI + E++ G+ P+ + + P R
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPR 260
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPK 572
+ VS R + +LV+EP R A E+ HPF ++ A PP
Sbjct: 261 VKDLHKVSSVLRGFLDLMLVREPSQRAT----AQELLGHPF--------LKLAGPPSCIV 308
Query: 573 PV 574
P+
Sbjct: 309 PL 310
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI-- 269
++ + +F+ ++++G G G VY + T A+K K L + + + REI
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 59
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
L+ L+HP + L TE LV EF DL P ++ Y+ ++L
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 123 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 292
Query: 556 GVN 558
V
Sbjct: 293 DVT 295
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL-LRAQTEREILQSLDHP 276
+ L + LG G + V+L+ A+KV+ +A LA LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 277 FLPTLYTHFETEK----FSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
+ +Y E E +VME+ G L + + G P++A+ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ H GII+RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 510 PLRFPESPVVSFAARD--------LIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL 561
+R E P+ A + ++ L K P++R + A E++ +
Sbjct: 231 HVR--EDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVR 278
Query: 562 IRCATPPEIPKPV-EIERIPAPTSSTSEKTAP 592
+ PPE PK + + ER +S+ + P
Sbjct: 279 VHNGEPPEAPKVLTDAERTSLLSSAAGNLSGP 310
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 122 CHSHRVL----HRDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 291
Query: 556 GVN 558
V
Sbjct: 292 DVT 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 211 GVLG-LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
G LG + +F+ ++++G G G VY + T A+K K L + + + REI
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREI 57
Query: 270 --LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEV 327
L+ L+HP + L TE LV EF DL P ++ Y+ ++
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 328 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 123 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 292
Query: 556 GVN 558
V
Sbjct: 293 DVT 295
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 26 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNV 506
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 507 VGQPLR 512
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 82/269 (30%)
Query: 235 SELSGTKCYF-AMKVMDKAS--LAGRKKLLR--AQTER------EILQSLDHP----FLP 279
E+ G C+ A+KV + + + K+L+R +T+R ++++ L+HP F+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY +K + E+ GG L + + +Y Q V F ++ + YLH + I
Sbjct: 75 VLYK----DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF-AKDIASGMAYLHSMNI 129
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIE 399
I+RDL N LVRE+ +++++DF L+ L+ E LR
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLA-------RLMVDEKTQPEGLR------------- 169
Query: 400 PSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSFVGTHE 459
S K DRK + + VG
Sbjct: 170 --------------------SLKKPDRKKRYTV----------------------VGNPY 187
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 488
++APE+I G + VD ++FGI L E++
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 121 CHSHRVL----HRDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 290
Query: 556 GVN 558
V
Sbjct: 291 DVT 293
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 199 RWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGR 257
R EA + + G L F + LG G+ G V+ + A K++ + A R
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 75
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPE 317
+++R E ++L + P++ Y F ++ + ME GG L + +K PE
Sbjct: 76 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPE 130
Query: 318 QAVRFYVAEVLLALEYL-HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Q + V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 131 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y++PE ++G + D W+
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 215
Query: 480 FGIFLYELLFGKTPF 494
G+ L E+ G+ P
Sbjct: 216 MGLSLVEMAVGRYPI 230
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 266 EREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTL------RQKQPGKYFPEQA 319
E + + HP + + YT F + LVM+ GG + + + + E
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 320 VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + EVL LEYLH G I+RD+K N+L+ EDG + ++DF +S
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 453 SFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF 494
+FVGT ++APE+++ G+ D W+FGI EL G P+
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 201 EAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGRKK 259
EA +A+ G L F + LG G+ G V + + A K++ + A R +
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ 60
Query: 260 LLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQA 319
++R E ++L + P++ Y F ++ + ME GG L + ++ K PE+
Sbjct: 61 IIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEI 115
Query: 320 VRFYVAEVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ VL L YL I++RD+KP N+LV G I L DF +S
Sbjct: 116 LGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y+APE ++G + D W+
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWS 198
Query: 480 FGIFLYELLFGKTPF 494
G+ L EL G+ P
Sbjct: 199 MGLSLVELAVGRYPI 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 266 EREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTL------RQKQPGKYFPEQA 319
E + + HP + + YT F + LVM+ GG + + + + E
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 320 VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + EVL LEYLH G I+RD+K N+L+ EDG + ++DF +S
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 453 SFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF 494
+FVGT ++APE+++ G+ D W+FGI EL G P+
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 121 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 290
Query: 556 GVN 558
V
Sbjct: 291 DVT 293
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 208 ARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTER 267
A D VL + L + +G G V T FA+K++D A L +R
Sbjct: 18 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 77
Query: 268 E--ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFY 323
E I L HP + L + ++ +V EF G DL +++ G + E Y
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 324 VAEVLLALEYLHMLGIIYRDLKPENVLV 351
+ ++L AL Y H II+RD+KP VL+
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLL 165
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
VGT ++APE++K E +G VD W G+ L+ LL G PF G+ R + G+ P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 255
Query: 515 -ESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKP 573
+ +S +A+DL+R +L+ +P R+ E HP+ + + R A +P+
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 307
Query: 574 VE 575
VE
Sbjct: 308 VE 309
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
RLG G G V+ E T A+K + R ++ RA+ E L P + LY
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE-ELMACAGLTSPRIVPLY 151
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ + ME GG L L ++Q PE +Y+ + L LEYLH I++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 343 DLKPENVLVREDG-HIMLSDF 362
D+K +NVL+ DG H L DF
Sbjct: 210 DVKADNVLLSSDGSHAALCDF 230
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT ++APE++ G + VD W+ + +L G P+ + +P E
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 312
Query: 516 SP--VVSFAARDLIRGLLVKEPQHRLA 540
P A+ + GL KEP HR++
Sbjct: 313 IPPSCAPLTAQAIQEGLR-KEPIHRVS 338
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 208 ARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTER 267
A D VL + L + +G G V T FA+K++D A L +R
Sbjct: 16 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 268 E--ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFY 323
E I L HP + L + ++ +V EF G DL +++ G + E Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 324 VAEVLLALEYLHMLGIIYRDLKPENVLV 351
+ ++L AL Y H II+RD+KP VL+
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLL 163
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 514
VGT ++APE++K E +G VD W G+ L+ LL G PF G+ R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 515 -ESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKP 573
+ +S +A+DL+R +L+ +P R+ E HP+ + + R A +P+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 305
Query: 574 VE 575
VE
Sbjct: 306 VE 307
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 122 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 291
Query: 556 GVN 558
V
Sbjct: 292 DVT 294
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 126 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 295
Query: 556 GVN 558
V
Sbjct: 296 DVT 298
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L+ +G G G+VY + A+K M + +K E LQ L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 278 LPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAE--VLLALEY 333
+ E + LVME+C G DL + +K P Q V L L Y
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK------PLQEVEIAAVTHGALQGLAY 169
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDF 362
LH +I+RD+K N+L+ E G + L DF
Sbjct: 170 LHSHNMIHRDVKAGNILLSEPGLVKLGDF 198
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 454 FVGTHEYLAPEIIKGEGHG---SAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 510
FVGT ++APE+I G VD W+ GI EL K P + L+++
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 269
Query: 511 LRFPESPVVSFAARDLIRGLLVKEPQHR 538
+S S R+ + L K PQ R
Sbjct: 270 SPALQSGHWSEYFRNFVDSCLQKIPQDR 297
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 122 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 291
Query: 556 GVN 558
V
Sbjct: 292 DVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 121 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 290
Query: 556 GVN 558
V
Sbjct: 291 DVT 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 118 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 287
Query: 556 GVN 558
V
Sbjct: 288 DVT 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 126 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 295
Query: 556 GVN 558
V
Sbjct: 296 DVT 298
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 216 SHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSL 273
S ++L + LG G V + L+G + +A K+++ L+ R + + E I + L
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQE--YAAKIINTKKLSARDHQ-KLEREARICRLL 78
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
HP + L+ E L+ + GG+L +Y+ E + ++L A+ +
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLH 136
Query: 334 LHMLGIIYRDLKPENVLVR---EDGHIMLSDFDLSL 366
H +G+++RDLKPEN+L+ + + L+DF L++
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 452 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 241
Query: 512 RF--PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
F PE V+ A+DLI +L P R+ A E +HP+
Sbjct: 242 DFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWI 282
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 120 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 289
Query: 556 GVN 558
V
Sbjct: 290 DVT 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 120 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 289
Query: 556 GVN 558
V
Sbjct: 290 DVT 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 120 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 173
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 289
Query: 556 GVN 558
V
Sbjct: 290 DVT 292
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
RLG G G V+ E T A+K + R ++ RA+ E L P + LY
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE-ELMACAGLTSPRIVPLY 132
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ + ME GG L L ++Q PE +Y+ + L LEYLH I++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 343 DLKPENVLVREDG-HIMLSDF 362
D+K +NVL+ DG H L DF
Sbjct: 191 DVKADNVLLSSDGSHAALCDF 211
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPE 515
GT ++APE++ G + VD W+ + +L G P+ + +P E
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 516 SP--VVSFAARDLIRGLLVKEPQHRLA 540
P A+ + GL KEP HR++
Sbjct: 294 IPPSCAPLTAQAIQEGLR-KEPIHRVS 319
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 118 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 287
Query: 556 GVN 558
V
Sbjct: 288 DVT 290
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 46/180 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 118 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 287
Query: 556 GVN 558
V
Sbjct: 288 DVT 290
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL-LRAQTEREILQSLDHP 276
+ L + LG G + V+L+ A+KV+ +A LA LR + E + +L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 89
Query: 277 FLPTLYTHFETEK----FSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
+ +Y E E +VME+ G L + + G P++A+ +A+ AL
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 147
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ H GII+RD+KP N+++ + + DF ++ A S
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 496
++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
++G G G V ++ + + A+K MD R+ L E I++ H + +Y
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 137
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ +VMEF GG L + E+ + VL AL LH G+I+R
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 343 DLKPENVLVREDGHIMLSDF 362
D+K +++L+ DG + LSDF
Sbjct: 195 DIKSDSILLTHDGRVKLSDF 214
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSGNRATLFNVVG 508
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P R VS + + + LLV++P R A E+ +HPF
Sbjct: 286 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFL 327
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
F L+ +G G G+VY + A+K M + +K E LQ L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 278 LPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAE--VLLALEY 333
+ E + LVME+C G DL + +K P Q V L L Y
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK------PLQEVEIAAVTHGALQGLAY 130
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDF 362
LH +I+RD+K N+L+ E G + L DF
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGLVKLGDF 159
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 454 FVGTHEYLAPEIIKGEGHGS---AVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 510
FVGT ++APE+I G VD W+ GI EL K P + L+++
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 230
Query: 511 LRFPESPVVSFAARDLIRGLLVKEPQHR 538
+S S R+ + L K PQ R
Sbjct: 231 SPALQSGHWSEYFRNFVDSCLQKIPQDR 258
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
++G G G V ++ + + A+K MD R+ L E I++ H + +Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 94
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ +VMEF GG L + E+ + VL AL LH G+I+R
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 343 DLKPENVLVREDGHIMLSDF 362
D+K +++L+ DG + LSDF
Sbjct: 152 DIKSDSILLTHDGRVKLSDF 171
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSGNRATLFNVVG 508
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P R VS + + + LLV++P R A E+ +HPF
Sbjct: 243 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFL 284
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV E DL T P ++ Y+ ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 118 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 287
Query: 556 GVN 558
V
Sbjct: 288 DVT 290
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
++G G G V ++ + + A+K MD R+ L E I++ H + +Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 92
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ +VMEF GG L + E+ + VL AL LH G+I+R
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 343 DLKPENVLVREDGHIMLSDF 362
D+K +++L+ DG + LSDF
Sbjct: 150 DIKSDSILLTHDGRVKLSDF 169
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSGNRATLFNVVG 508
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P R VS + + + LLV++P R A E+ +HPF
Sbjct: 241 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFL 282
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQSLD 274
+F+ ++++G G G VY + T A+K K L + + + REI L+ L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HP + L TE LV EF DL P ++ Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 335 HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 118 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 287
Query: 556 GVN 558
V
Sbjct: 288 DVT 290
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S F + LG G G V + + Y+A+K + +KL +E +L SL+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNH 61
Query: 276 PFLPTLYTHF-----------ETEKFSCLV--MEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
++ Y + +K S L ME+C L+ L + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASS 379
+ ++L AL Y+H GII+RDLKP N+ + E ++ + DF L+ S ++K S
Sbjct: 122 F-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 453 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 504
S +GT Y+A E++ G GH +D ++ GI +E+++ PF R +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL 238
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 26 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 237
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 238 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 278
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 26 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNV 506
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 507 VGQPLR 512
+G P R
Sbjct: 239 LGTPTR 244
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 239 GTKCYFAMKVMDKASLAGRKKLLRAQTER-EILQSL-DHPFLPTLYTHFETEKFSCLVME 296
T FA+K++DK+ R TE EIL HP + TL ++ K+ +V E
Sbjct: 45 ATNXEFAVKIIDKSK--------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
Query: 297 FCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL-VRE 353
GG+L LRQK +F E+ + + +EYLH G+++RDLKP N+L V E
Sbjct: 97 LXKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDE 152
Query: 354 DGH---IMLSDFDLS 365
G+ I + DF +
Sbjct: 153 SGNPESIRICDFGFA 167
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 457 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA--TLFNVVGQPLRFP 514
T ++APE+++ +G+ +A D W+ G+ LY L G TPF + + +G +F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSG-KFS 241
Query: 515 ES----PVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNW 559
S VS A+DL+ L +P RL A + +HP+ V+W
Sbjct: 242 LSGGYWNSVSDTAKDLVSKXLHVDPHQRLT----AALVLRHPWI--VHW 284
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 239 GTKCYFAMKVMDKASLAGRKKLLRAQTER-EILQSL-DHPFLPTLYTHFETEKFSCLVME 296
T FA+K++DK+ R TE EIL HP + TL ++ K+ +V E
Sbjct: 45 ATNMEFAVKIIDKSK--------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
Query: 297 FCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL-VRE 353
GG+L LRQK +F E+ + + +EYLH G+++RDLKP N+L V E
Sbjct: 97 LMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDE 152
Query: 354 DGH---IMLSDFDLS 365
G+ I + DF +
Sbjct: 153 SGNPESIRICDFGFA 167
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 457 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA--TLFNVVGQPLRFP 514
T ++APE+++ +G+ +A D W+ G+ LY +L G TPF + + +G +F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG-KFS 241
Query: 515 ES----PVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNW 559
S VS A+DL+ +L +P RL A + +HP+ V+W
Sbjct: 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVLRHPWI--VHW 284
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 221 LKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDHPFL 278
L+ +G G GSV + + + A+K + + SL ++ R E +L+ L H +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 89
Query: 279 PTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
L F E FS ++ G DL+ + + Q ++ V+F V ++L L+Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA---LSDEHVQFLVYQLLRGLKY 146
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+H GII+RDLKP NV V ED + + DF L+
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ S L L +A + +V T Y APEI+ H VD W+
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 480 FGIFLYELLFGKTPFKGS---GNRATLFNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL GK F GS + VVG P + + S AR I+ L
Sbjct: 215 VGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 244 FAMKVMDKASLAGRKKLLRAQTEREIL-QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGD 302
+A+K+++K + R ++ R E E L Q + + L FE + LV E GG
Sbjct: 41 YAVKIIEKQAGHSRSRVFR---EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS 97
Query: 303 LHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGH---IML 359
+ QKQ K+F E+ V +V AL++LH GI +RDLKPEN+L + +
Sbjct: 98 ILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKI 155
Query: 360 SDFDL 364
DFDL
Sbjct: 156 CDFDL 160
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 26/123 (21%)
Query: 456 GTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKG------SGNRATLF 504
G+ EY+APE++ + + D W+ G+ LY +L G PF G +R +
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 505 NVVGQPL---------RFPESPV--VSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
V L FP+ +S A+DLI LLV++ + RL+ A ++ QHP+
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 554 FEG 556
+G
Sbjct: 299 VQG 301
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 199 RWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGR 257
R EA + + G L F + LG G+ G V+ + A K++ + A R
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 67
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPE 317
+++R E ++L + P++ Y F ++ + ME GG L + +K G+ PE
Sbjct: 68 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGR-IPE 122
Query: 318 QAVRFYVAEVLLALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Q + V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 123 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y++PE ++G + D W+
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 207
Query: 480 FGIFLYELLFGKTPF-KGSGNRAT---LFNVVGQPLRFPESPVVSFAARDLIRGLLVKEP 535
G+ L E+ G+ P GSG+ A L +V +P S V S +D + L+K P
Sbjct: 208 MGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 267
Query: 536 QHRLAYKRGATEIKQHPFF-----EGVNWALIRCAT 566
R K ++ H F E V++A C+T
Sbjct: 268 AERADLK----QLMVHAFIKRSDAEEVDFAGWLCST 299
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
++G G G V ++ + + A+K MD R+ L E I++ H + +Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 83
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ +VMEF GG L + E+ + VL AL LH G+I+R
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 343 DLKPENVLVREDGHIMLSDF 362
D+K +++L+ DG + LSDF
Sbjct: 141 DIKSDSILLTHDGRVKLSDF 160
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSGNRATLFNVVG 508
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P R VS + + + LLV++P R A E+ +HPF
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFL 273
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 221 LKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPT 280
L +LG G +VY + T A+K + G A E +L+ L H + T
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP--CTAIREVSLLKDLKHANIVT 64
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHTLRQ--KQPGKYFPEQAVRFYVAEVLLALEYLHMLG 338
L+ TEK LV E+ L+Q G V+ ++ ++L L Y H
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
+++RDLKP+N+L+ E G + L+DF L+ R PT
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLA-RAKSIPT 154
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 43/168 (25%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAPEIIKGE-GHGSA 474
+D KP+N + N+ L +A+ AR+ S V T Y P+I+ G + +
Sbjct: 124 RDLKPQNLLINERGELK--LADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ 181
Query: 475 VDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPL-------------------R 512
+D W G YE+ G+ F GS L F ++G P +
Sbjct: 182 IDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241
Query: 513 FPESPVVSFAAR------DLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
+ ++S A R DL+ LL E ++R++ A + +HPFF
Sbjct: 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFF 285
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
++L + LG G V +A K+++ L+ R + + E I + L HP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 91
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ L+ E F LV + GG+L +Y+ E + ++L ++ ++H
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 338 GIIYRDLKPENVLVR---EDGHIMLSDFDLSL 366
I++RDLKPEN+L+ + + L+DF L++
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 452 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 250
Query: 512 RF--PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F PE V+ A++LI +L P R+ A + +HP+
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRIT----ADQALKHPW 290
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 60 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 108
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 271
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 272 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 312
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 54 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 102
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 265
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 266 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 306
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 64 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 112
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 275
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 276 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 316
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 28/202 (13%)
Query: 224 LGCGDIGSVY--LSELSGTKCYFAMKVMDKAS-LAGRKKLLRAQTEREILQSLDHPFLPT 280
LGCG+ GSV + + + A+KV+ + + A ++++R E +I+ LD+P++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIVR 400
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGII 340
L + E LVME GG LH + + P V + +V + ++YL +
Sbjct: 401 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 341 YRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACIEP 400
+R+L NVL+ + +SDF LS + A S PL+
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-------------- 504
Query: 401 SCIQPSCVTPTCFSPRLFSSKS 422
P C + R FSS+S
Sbjct: 505 ------WYAPECINFRKFSSRS 520
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFK 495
++ APE I S D W++G+ ++E L +G+ P+K
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 62 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 110
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 273
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 274 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 314
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTERE-------ILQSLDH 275
++G G G V ++ + + A+K MD LR Q RE I++ H
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMD----------LRKQQRRELLFNEVVIMRDYQH 80
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ +Y + +VMEF GG L + E+ + VL AL LH
Sbjct: 81 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLH 137
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDF 362
G+I+RD+K +++L+ DG + LSDF
Sbjct: 138 AQGVIHRDIKSDSILLTHDGRVKLSDF 164
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSGNRATLFNVVG 508
R VGT ++APE+I +G VD W+ GI + E++ G+ P F +A
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 509 QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P R VS + + + LLV++P R A E+ +HPF
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFL 277
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 60 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 108
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 271
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 272 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 312
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGR--KKLLRAQTEREILQSLDH 275
++L + +G G V T +A K+++ L+ R +KL R E I + L H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARICRLLKH 62
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ L+ E F LV + GG+L +Y+ E + ++L A+ + H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 336 MLGIIYRDLKPENVLVR---EDGHIMLSDFDLSL 366
+G+++RDLKPEN+L+ + + L+DF L++
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 452 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT YL+PE+++ E +G VD W G+ LY LL G PF +
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 223
Query: 512 RF--PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
F PE V+ A++LI +L P R+ A E +HP+
Sbjct: 224 DFPSPEWDTVTPEAKNLINQMLTINPAKRIT----AHEALKHPW 263
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 31 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 79
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 242
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 243 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 283
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 105 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 153
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 316
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 317 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 357
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 34 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 82
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 245
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 246 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 286
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 38 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 86
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 249
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 250 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 290
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 38 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 86
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 249
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 250 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 290
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
++G G G V L+ + A+K+MD R+ L E I++ H + +Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF---NEVVIMRDYQHFNVVEMY 108
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ + ++MEF GG L + + E+ + VL AL YLH G+I+R
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 343 DLKPENVLVREDGHIMLSDF 362
D+K +++L+ DG + LSDF
Sbjct: 166 DIKSDSILLTLDGRVKLSDF 185
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSGNRATLFNVVGQPLR 512
VGT ++APE+I + + VD W+ GI + E++ G+ P F S +A P +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK 260
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATP 567
S VS RD + +LV++PQ R A E+ HPF + L C P
Sbjct: 261 LKNSHKVSPVLRDFLERMLVRDPQERAT----AQELLDHPFL--LQTGLPECLVP 309
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 244 FAMKVMDKASLAGRKKLLRAQTEREILQ---SLDHPFLPTLYTHFETEKFSCLVMEFCPG 300
FA+K++ K + A T++EI HP + L+ F + + LVME G
Sbjct: 39 FAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 301 GDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDG---HI 357
G+L +K+ K+F E + + +++ A+ ++H +G+++RDLKPEN+L ++ I
Sbjct: 91 GELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148
Query: 358 MLSDFDLS 365
+ DF +
Sbjct: 149 KIIDFGFA 156
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 457 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPES 516
T Y APE++ G+ + D W+ G+ LY +L G+ PF+ T + V + +
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 517 PV---------VSFAARDLIRGLLVKEPQHRL 539
VS A+DLI+GLL +P RL
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 45 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 93
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 256
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 257 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
+ +F+ ++++G G G VY ++L+G +D + +R E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKE 58
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 119 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 288
Query: 556 GVN 558
V
Sbjct: 289 DVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
+ +F+ ++++G G G VY ++L+G +D + +R E +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR---EISLLKE 57
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV EF DL P ++ Y+ ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAP 463
C S R+ +D KP+N + N + +A+ AR+ THE Y AP
Sbjct: 118 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 287
Query: 556 GVN 558
V
Sbjct: 288 DVT 290
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 39 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 87
Query: 278 LPTLYTHF------ETEKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 250
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 251 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 291
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 239 GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFC 298
T +A+KV+DK+ +++ +L+ HP + TL ++ K LV E
Sbjct: 50 ATNMEYAVKVIDKSKRDPSEEI------EILLRYGQHPNIITLKDVYDDGKHVYLVTELM 103
Query: 299 PGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL-VREDG 355
GG+L LRQK +F E+ F + + +EYLH G+++RDLKP N+L V E G
Sbjct: 104 RGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 356 H---IMLSDFDLS 365
+ + + DF +
Sbjct: 160 NPECLRICDFGFA 172
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 457 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG--SGNRATLFNVVGQ---PL 511
T ++APE++K +G+ D W+ GI LY +L G TPF S + +G L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
VS A+DL+ +L +P RL A ++ QHP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQVLQHPW 285
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G G VY + A+K + + + L E + + L H +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL---HEEIALHKHLKHKNIVQYLG 86
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP-EQAVRFYVAEVLLALEYLHMLGIIYR 342
F F + ME PGG L L + + G EQ + FY ++L L+YLH I++R
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 343 DLKPENVLVRE-DGHIMLSDFDLSLRCA 369
D+K +NVL+ G + +SDF S R A
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLA 174
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 453 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGN-RATLFNVVGQ 509
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF G +A +F VG
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 240
Query: 510 PLRFPESP-VVSFAARDLIRGLLVKEPQHR 538
PE P +S A+ I +P R
Sbjct: 241 FKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL--QSLDH 275
+ +K +G G+ G L TK A+K +++ + + +REI+ +SL H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA------IDENVQREIINHRSLRH 75
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + T ++ME+ GG+L+ R G+ F E RF+ ++L + Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGR-FSEDEARFFFQQLLSGVSYCH 133
Query: 336 MLGIIYRDLKPENVLV 351
+ I +RDLK EN L+
Sbjct: 134 SMQICHRDLKLENTLL 149
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 453 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKG----SGNRATLFNVV 507
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P+ +S LI + V +P R++ EIK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIKTHSWF 278
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 26 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 237
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 238 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 278
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 26 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 237
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 238 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 278
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 26 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 237
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 238 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 278
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 239 GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFC 298
T +A+KV+DK+ +++ +L+ HP + TL ++ K LV E
Sbjct: 50 ATNMEYAVKVIDKSKRDPSEEI------EILLRYGQHPNIITLKDVYDDGKHVYLVTELM 103
Query: 299 PGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL-VREDG 355
GG+L LRQK +F E+ F + + +EYLH G+++RDLKP N+L V E G
Sbjct: 104 RGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 356 H---IMLSDFDLS 365
+ + + DF +
Sbjct: 160 NPECLRICDFGFA 172
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 457 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG--SGNRATLFNVVGQ---PL 511
T ++APE++K +G+ D W+ GI LY +L G TPF S + +G L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPF 553
VS A+DL+ +L +P RL A ++ QHP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQVLQHPW 285
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 27 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 75
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 238
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 239 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 279
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 30 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 78
Query: 278 LPTLYTHFET------EKFSCLVMEFCPGGDLHTLRQKQPGKY-FPEQAVRFYVAEVLLA 330
+ L F + E + LV+++ P R K P V+ Y+ ++ +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 241
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 242 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 282
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 221 LKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDHPFL 278
L+ +G G GSV + + + A+K + + SL ++ R E +L+ L H +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 89
Query: 279 PTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
L F E FS ++ G DL+ + + Q ++ V+F V ++L L+Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKY 146
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+H GII+RDLKP NV V ED + + DF L+
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ S L L +A + +V T Y APEI+ H VD W+
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 480 FGIFLYELLFGKTPFKGS---GNRATLFNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL GK F GS + VVG P + + S AR I+ L
Sbjct: 215 VGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L+HP + L TE LV E DL P ++ Y+ ++L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 46/183 (25%)
Query: 412 CFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTEARSMSF--------VGTHEYLAP 463
C S R+ +D KP+N + N + +A+ AR+ V T Y AP
Sbjct: 122 CHSHRVLH----RDLKPQNLLINTEGAIK--LADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 464 EIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV---VGQPLR------- 512
EI+ G + + +AVD W+ G E++ + F G LF + +G P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 513 --------FPESPVVSFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
FP+ F+ R L+ +L +P R++ K HPFF+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA----HPFFQ 291
Query: 556 GVN 558
V
Sbjct: 292 DVT 294
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S F + LG G G V + + Y+A+K + +KL +E +L SL+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLNH 61
Query: 276 PFLPTLYTHF-----------ETEKFSCLVM--EFCPGGDLHTLRQKQPGKYFPEQAVRF 322
++ Y + +K S L + E+C L+ L + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASS 379
+ ++L AL Y+H GII+R+LKP N+ + E ++ + DF L+ S ++K S
Sbjct: 122 F-RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 453 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLF 504
S +GT Y+A E++ G GH +D ++ GI +E ++ PF R +
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNIL 238
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G G VY + A+K + + + L E + + L H +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL---HEEIALHKHLKHKNIVQYLG 72
Query: 284 HFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP-EQAVRFYVAEVLLALEYLHMLGIIYR 342
F F + ME PGG L L + + G EQ + FY ++L L+YLH I++R
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 343 DLKPENVLVRE-DGHIMLSDFDLSLRCA 369
D+K +NVL+ G + +SDF S R A
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLA 160
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 453 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGN-RATLFNVVGQ 509
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF G +A +F VG
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 226
Query: 510 PLRFPESP-VVSFAARDLIRGLLVKEPQHR 538
PE P +S A+ I +P R
Sbjct: 227 FKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 452 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT YL+PE+++ + +G VD W G+ LY LL G PF +
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 230
Query: 512 RF--PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
F PE V+ A+DLI +L P R+ A E +HP+
Sbjct: 231 DFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWI 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 218 FRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
++L + LG G V + L+G + +A +++ L+ R + + E I + L H
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQE--YAAMIINTKKLSARDHQ-KLEREARICRLLKH 69
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + L+ E L+ + GG+L +Y+ E + ++L A+ + H
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 336 MLGIIYRDLKPENVLVR---EDGHIMLSDFDLSL 366
+G+++R+LKPEN+L+ + + L+DF L++
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 267 REILQSLDHPFLPTLYTHFE-----TEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVR 321
R+ L + HP + ++ E + +VME+ G L ++ G+ P
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL----KRSKGQKLPVAEAI 185
Query: 322 FYVAEVLLALEYLHMLGIIYRDLKPENVLVRED 354
Y+ E+L AL YLH +G++Y DLKPEN+++ E+
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 221 LKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPT 280
L +G G G V+ T A+K M ++ K + + +L+S D P++
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-VVLKSHDCPYIVQ 88
Query: 281 LYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL-HMLGI 339
+ F T + ME G L+++ G PE+ + ++ AL YL G+
Sbjct: 89 CFGTFITNTDVFIAMELM-GTCAEKLKKRMQGP-IPERILGKMTVAIVKALYYLKEKHGV 146
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLSLR 367
I+RD+KP N+L+ E G I L DF +S R
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGR 174
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 442 LIAEPTEARSMSFVGTHEYLAPEIIK-----GEGHGSAVDWWTFGIFLYELLFGKTPFKG 496
L+ + + RS G Y+APE I + D W+ GI L EL G+ P+K
Sbjct: 175 LVDDKAKDRS---AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK- 230
Query: 497 SGNRATLFNVVGQPLR-----FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQH 551
N T F V+ + L+ P S + ++ L K+ + R Y + + +H
Sbjct: 231 --NCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNK----LLEH 284
Query: 552 PFFE 555
F +
Sbjct: 285 SFIK 288
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL--QSLDH 275
+ L+K +G G+ G L + A+K ++ R + + A +REI+ +SL H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIAANVKREIINHRSLRH 74
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + T +VME+ GG+L R G+ F E RF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 336 MLGIIYRDLKPENVLV 351
+ + +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 453 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKG----SGNRATLFNVV 507
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGRKKLLRAQTEREILQSLDHP 276
F + LG G+ G V+ + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH- 335
++ Y F ++ + ME GG L + +K PEQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RD+KP N+LV G I L DF +S
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y++PE ++G + D W+
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 480 FGIFLYELLFGKTPF------KGSGNRATLFN----VVGQPLRFPESPVVSFAARDLIRG 529
G+ L E+ G+ P + S +F +V +P S V S +D +
Sbjct: 189 MGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK 248
Query: 530 LLVKEPQHRLAYKRGATEIKQHPFF-----EGVNWALIRCAT 566
L+K P R K ++ H F E V++A C+T
Sbjct: 249 CLIKNPAERADLK----QLMVHAFIKRSDAEEVDFAGWLCST 286
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 221 LKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDHPFL 278
L+ +G G GSV + + + A+K + + SL ++ R E +L+ L H +
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 81
Query: 279 PTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
L F E FS ++ G DL+ + + Q ++ V+F V ++L L+Y
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKY 138
Query: 334 LHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+H GII+RDLKP NV V ED + + DF L+
Sbjct: 139 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A + +V T Y APEI+ H VD W+
Sbjct: 147 RDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 206
Query: 480 FGIFLYELLFGKTPFKGS---GNRATLFNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL GK F GS + VVG P + + S AR I+ L
Sbjct: 207 VGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 260
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL--QSLDH 275
+ L+K +G G+ G L A+K ++ R + + +REI+ +SL H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + T +VME+ GG+L R G+ F E RF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYAH 132
Query: 336 MLGIIYRDLKPENVLVREDG----HIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+ + +RDLK EN L+ DG + ++DF S KAS L ++P K+ V
Sbjct: 133 AMQVAHRDLKLENTLL--DGSPAPRLKIADFGYS----------KASVLHSQP--KSAVG 178
Query: 392 CVQPACIEPSCI 403
PA I P +
Sbjct: 179 T--PAYIAPEVL 188
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 453 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKG----SGNRATLFNVV 507
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGRKKLLRAQTEREILQSLDHP 276
F + LG G+ G V+ + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL-H 335
++ Y F ++ + ME GG L + +K PEQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RD+KP N+LV G I L DF +S
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y++PE ++G + D W+
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 480 FGIFLYELLFGKTPF 494
G+ L E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGRKKLLRAQTEREILQSLDHP 276
F + LG G+ G V+ + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL-H 335
++ Y F ++ + ME GG L + +K PEQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RD+KP N+LV G I L DF +S
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y++PE ++G + D W+
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 480 FGIFLYELLFGKTPF 494
G+ L E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 323
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 324 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 535 PQHR 538
P+ R
Sbjct: 505 PEER 508
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT----EREILQSLDHPF 277
K +G G G VY + K+ D L KK+L+ + E +I++ LDH
Sbjct: 26 KVIGNGSFGVVYQA-----------KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 278 LPTLYTHFET--EK----FSCLVMEFCPGGDLHTLRQKQPGK-YFPEQAVRFYVAEVLLA 330
+ L F + EK + LV+++ P R K P V+ Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIM-LSDF 362
L Y+H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 451 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 237
Query: 510 PLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPE 569
V+ R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 238 --------VLGTPTREQIREMNPNYTEFKFP------QIKAHPWTK-----VFRPRTPPE 278
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGRKKLLRAQTEREILQSLDHP 276
F + LG G+ G V+ + A K++ + A R +++R E ++L + P
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 67
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL-H 335
++ Y F ++ + ME GG L + +K PEQ + V+ L YL
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RD+KP N+LV G I L DF +S
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
FVGT Y++PE ++G + D W+ G+ L E+ G+ P L +V +P
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPK 225
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF-----EGVNWALIRCAT 566
S V S +D + L+K P R K ++ H F E V++A C+T
Sbjct: 226 LPSAVFSLEFQDFVNKCLIKNPAERADLK----QLMVHAFIKRSDAEEVDFAGWLCST 279
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 14/186 (7%)
Query: 219 RLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFL 278
+L+K+LG G G V++ + + KV K G + E ++++L H L
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNST-----KVAVKTLKPGTMSVQAFLEEANLMKTLQHDKL 69
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDL-HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY E+ ++ EF G L L+ + GK + + F A++ + Y+
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERK 128
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPAC 397
I+RDL+ NVLV E ++DF L+ +I+ + A K P+ P
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLA-------RVIEDNEYTAREGAKFPIKWTAPEA 181
Query: 398 IEPSCI 403
I C
Sbjct: 182 INFGCF 187
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
++ APE I + W+FGI LYE++ +GK P+ G N A + + + Q R P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-ADVMSALSQGYRMP 230
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 453 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKG----SGNRATLFNVV 507
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL--QSLDH 275
+ L+K +G G+ G L + A+K ++ R + + +REI+ +SL H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + T +VME+ GG+L R G+ F E RF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 336 MLGIIYRDLKPENVLV 351
+ + +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 453 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKG----SGNRATLFNVV 507
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ R T+ ++
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREIL--QSLDH 275
+ L+K +G G+ G L + A+K ++ R + + +REI+ +SL H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 73
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + T +VME+ GG+L R G+ F E RF+ +++ + Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 131
Query: 336 MLGIIYRDLKPENVLV 351
+ + +RDLK EN L+
Sbjct: 132 AMQVCHRDLKLENTLL 147
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 14/186 (7%)
Query: 219 RLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFL 278
+L+KRLG G G V++ + + KV K G + E ++++L H L
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNST-----KVAVKTLKPGTMSVQAFLEEANLMKTLQHDKL 70
Query: 279 PTLYTHFETEKFSCLVMEFCPGGDL-HTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
LY E+ ++ E+ G L L+ + GK + + F A++ + Y+
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERK 129
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPAC 397
I+RDL+ NVLV E ++DF L+ +I+ + A K P+ P
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLA-------RVIEDNEYTAREGAKFPIKWTAPEA 182
Query: 398 IEPSCI 403
I C
Sbjct: 183 INFGCF 188
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
++ APE I D W+FGI LYE++ +GK P+ G N A + + Q R P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMP 231
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 223 RLGCGDIGSV--YLSELSGTKCYFAMKVMDK-------ASLAGRKKLLRAQTEREILQSL 273
+G G GSV + + SG K A+K + + A A R+ LL + E + L
Sbjct: 49 HVGSGAYGSVCSAIDKRSGEKV--AIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 274 DHPFLP--TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
F P +L ++ LVM F + T QK G F E+ +++ V ++L L
Sbjct: 107 LDVFTPASSLRNFYDF----YLVMPF-----MQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 158 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 63/165 (38%), Gaps = 37/165 (22%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A +A +V T Y APE+I H VD W+
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS 227
Query: 480 FGIFLYELLFGKTPFKGS---GNRATLFNVVGQP-----------------LRFPESPVV 519
G + E+L GKT FKG + V G P P++P
Sbjct: 228 VGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRK 287
Query: 520 SFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
F A DL+ +L + RL + T HPFFE
Sbjct: 288 DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT----HPFFE 328
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGRKKLLRAQTEREILQSLDHP 276
F + LG G+ G V+ + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL-H 335
++ Y F ++ + ME GG L + +K PEQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RD+KP N+LV G I L DF +S
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y++PE ++G + D W+
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 480 FGIFLYELLFGKTPF 494
G+ L E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMD-KASLAGRKKLLRAQTEREILQSLDHP 276
F + LG G+ G V+ + A K++ + A R +++R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL-H 335
++ Y F ++ + ME GG L + +K PEQ + V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RD+KP N+LV G I L DF +S
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 424 KDRKPKNEIGNQVSPLP----ELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 479
+D KP N + N + + + ++ + SFVGT Y++PE ++G + D W+
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 480 FGIFLYELLFGKTPF 494
G+ L E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYPI 203
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
++++ +LG G + +VYL+E + A+K + + L R + E L H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+ ++ E + LVME+ G L + G + A+ F ++L +++ H +
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINF-TNQILDGIKHAHDM 130
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
I++RD+KP+N+L+ D + L FD + A+S T
Sbjct: 131 RIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSET 164
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 439 LPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 496
+ + ++E + ++ +GT +Y +PE KGE D ++ GI LYE+L G+ PF G
Sbjct: 157 IAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 218 FRLLKRLGCGDIGSV--YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
+ + +RLG G G V ++ + +G + + + S R+ R E +I++ L+H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK-QCRQELSPKNRE---RWCLEIQIMKKLNH 72
Query: 276 PFL------PTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVL 328
P + P L ME+C GGDL L Q + E +R ++++
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 329 LALEYLHMLGIIYRDLKPENVLVR 352
AL YLH II+RDLKPEN++++
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQ 156
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 494
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 218 FRLLKRLGCGDIGSV--YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
+ + +RLG G G V ++ + +G + + + S R+ R E +I++ L+H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK-QCRQELSPKNRE---RWCLEIQIMKKLNH 71
Query: 276 PFL------PTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPEQAVRFYVAEVL 328
P + P L ME+C GGDL L Q + E +R ++++
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 329 LALEYLHMLGIIYRDLKPENVLVR 352
AL YLH II+RDLKPEN++++
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQ 155
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 494
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
K +G G G V+ ++L + KV+ R E +I++ + HP + L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIVKHPNVVDL 97
Query: 282 YTHF------ETEKFSCLVMEFCPG----GDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
F + E F LV+E+ P H + KQ P ++ Y+ ++L +L
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT---MPMLLIKLYMYQLLRSL 154
Query: 332 EYLHMLGIIYRDLKPENVLVR-EDGHIMLSDF 362
Y+H +GI +RD+KP+N+L+ G + L DF
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 32/149 (21%)
Query: 451 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSG---NRATLFNV 506
++S + + Y APE+I G + + +D W+ G + EL+ G+ F G + V
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257
Query: 507 VGQPLR--------------FPE----------SPVVSFAARDLIRGLLVKEPQHRLAYK 542
+G P R FP+ P A DLI LL P RL
Sbjct: 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT-- 315
Query: 543 RGATEIKQHPFFEGVNWALIRCATPPEIP 571
A E HPFF+ + R E+P
Sbjct: 316 --AIEALCHPFFDELRTGEARMPNGRELP 342
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 251 KASLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQ 310
+A++ +LLR + ++Q +D LY E ++ +VME+C G + +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVD-----VLYN--EEKQKMYMVMEYCVCG-MQEMLDSV 101
Query: 311 PGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
P K FP Y +++ LEYLH GI+++D+KP N+L+ G + +S ++
Sbjct: 102 PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Query: 456 GTHEYLAPEIIKG--EGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ-PLR 512
G+ + PEI G G VD W+ G+ LY + G PF+G N LF +G+
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKGSYA 231
Query: 513 FPE--SPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEI 570
P P +S DL++G+L EP R + + +I+QH +F + P E
Sbjct: 232 IPGDCGPPLS----DLLKGMLEYEPAKRFSIR----QIRQHSWFR-------KKHPPAEA 276
Query: 571 PKPVEIERIPAPTSSTSEKTAPTMVP 596
P P+ P+P + ++ T+VP
Sbjct: 277 PVPIP----PSPDTKDRWRSM-TVVP 297
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 223 RLGCGDIGSV--YLSELSGTKCYFAMKVMDK-------ASLAGRKKLLRAQTEREILQSL 273
+G G GSV + + SG K A+K + + A A R+ LL + E + L
Sbjct: 31 HVGSGAYGSVCSAIDKRSGEKV--AIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 274 DHPFLP--TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
F P +L ++ LVM F + T QK G F E+ +++ V ++L L
Sbjct: 89 LDVFTPASSLRNFYDF----YLVMPF-----MQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 140 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 63/165 (38%), Gaps = 37/165 (22%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A +A +V T Y APE+I H VD W+
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS 209
Query: 480 FGIFLYELLFGKTPFKGS---GNRATLFNVVGQP-----------------LRFPESPVV 519
G + E+L GKT FKG + V G P P++P
Sbjct: 210 VGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRK 269
Query: 520 SFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFE 555
F A DL+ +L + RL + T HPFFE
Sbjct: 270 DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT----HPFFE 310
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 375 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 425
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 426 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 482
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 483 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 537
Query: 392 CVQPACI 398
P CI
Sbjct: 538 WYAPECI 544
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 64
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 65 LVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 535 PQHR 538
P+ R
Sbjct: 246 PEER 249
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 452 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
MS G + ++APE+I+ D W++G+ L+ELL G+ PF+G A + V L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 512 RFP 514
P
Sbjct: 232 ALP 234
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 228 DIGSVYLSELSGT----KCYFAMKVMDKASL-AGR--------KKLLRAQTEREILQSLD 274
D + L E+ G K Y A + D+ ++ A R + + + E ++ L
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 275 HPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
HP + L E CLVMEF GG L+ + GK P + + ++ + YL
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYL 121
Query: 335 H---MLGIIYRDLKPENVLV 351
H ++ II+RDLK N+L+
Sbjct: 122 HDEAIVPIIHRDLKSSNILI 141
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 376 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 426
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 427 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 483
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 484 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 538
Query: 392 CVQPACI 398
P CI
Sbjct: 539 WYAPECI 545
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 270 LQSLDHPFLPTLY---THFETEKFSCLVMEF-CPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
L++ +HP + L+ T T++ + L + F DL T K P P + ++ +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++L L++LH +++RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF-------VGTHEYLAPEIIKGEGHGSAVD 476
+D KP+N + + +A+ AR SF V T Y APE++ + + VD
Sbjct: 144 RDLKPQNILVTSSGQIK--LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVD 201
Query: 477 WWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
W+ G E+ K F+GS + L +V+G P
Sbjct: 202 LWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +VME+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 238 SGTKCYFAMKVMDKASLAGRKKLLRAQTERE-------ILQSLDHPFLPTLYTHFETEKF 290
SGT Y AM V +A R+ L+ Q ++E +++ +P + +
Sbjct: 33 SGT-VYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 291 SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL 350
+VME+ GG L + + E + E L ALE+LH +I+RD+K +N+L
Sbjct: 92 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 351 VREDGHIMLSDFDLSLRCA-VSPTLIKASSLDAEPLRKNP 389
+ DG + L+DF CA ++P K S++ P P
Sbjct: 149 LGMDGSVKLTDFGF---CAQITPEQSKRSTMVGTPYWMAP 185
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFN 505
P +++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 506 VV--GQP-LRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRG-ATEIKQHPFFE 555
+ G P L+ PE F RD + L + + KRG A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVE-----KRGSAKELLQHQFLK 274
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 535 PQHR 538
P+ R
Sbjct: 422 PEER 425
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 126/317 (39%), Gaps = 75/317 (23%)
Query: 197 DLRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKA--SL 254
+L ++ I+ V D + + H +G G G VYL+ T+ A+K +++ L
Sbjct: 13 NLYFQGIKNVHVPDNYI-IKHL-----IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDL 66
Query: 255 AGRKKLLRAQTEREILQSLDHPFLPTLYTHF---ETEKFSCL--VMEFCPGGDLHTLRQK 309
K++LR T IL L ++ LY + KF L V+E DL L K
Sbjct: 67 IDCKRILREIT---ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLF-K 121
Query: 310 QPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 369
P + E+ ++ + +LL ++H GII+RDLKP N L+ +D + + DF L
Sbjct: 122 TPI-FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL----- 175
Query: 370 VSPTLIKASSLDAEPLRKNPVYCVQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPK 429
A ++++E KD
Sbjct: 176 -------ARTINSE----------------------------------------KDTNIV 188
Query: 430 NEIGNQVSPLPELIAEPTEARSMSFVGTHEYLAPE-IIKGEGHGSAVDWWTFGIFLYELL 488
N++ P P + + + S V T Y APE I+ E + ++D W+ G ELL
Sbjct: 189 NDLEENEEPGPH--NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Query: 489 -FGKTPFKGSGNRATLF 504
++ NR LF
Sbjct: 247 NMLQSHINDPTNRFPLF 263
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 216 SHF--RLLKR---LGCGDIGSV----YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+HF R LKR LG G G V Y E T A+K + S G + + E
Sbjct: 16 THFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKE 73
Query: 267 REILQSLDHPFLPTLYTHFETEKFSC---LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFY 323
EIL++L H + Y TE L+MEF P G L K K +Q ++ Y
Sbjct: 74 IEILRNLYHENI-VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-Y 131
Query: 324 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAE 383
++ ++YL ++RDL NVLV + + + DF L+ KA D E
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT----------KAIETDKE 181
Query: 384 PL-----RKNPVYCVQPACIEPS 401
R +PV+ P C+ S
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQS 204
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKA--SLAGRKKLLRAQTEREILQSLDH 275
+ +++ +G G G V + T A+K + A + K+ LR E +IL+ H
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKH 113
Query: 276 PFL--------PTL-YTHFETEKFSCLVMEFCPGGDLH-TLRQKQPGKYFPEQAVRFYVA 325
+ PT+ Y F++ +ME DLH + QP + VR+++
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---LTLEHVRYFLY 166
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
++L L+Y+H +I+RDLKP N+LV E+ + + DF ++ SP
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 535 PQHR 538
P+ R
Sbjct: 422 PEER 425
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 270 LQSLDHPFLPTLY---THFETEKFSCLVMEF-CPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
L++ +HP + L+ T T++ + L + F DL T K P P + ++ +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++L L++LH +++RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF-------VGTHEYLAPEIIKGEGHGSAVD 476
+D KP+N + + +A+ AR SF V T Y APE++ + + VD
Sbjct: 144 RDLKPQNILVTSSGQIK--LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVD 201
Query: 477 WWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
W+ G E+ K F+GS + L +V+G P
Sbjct: 202 LWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 270 LQSLDHPFLPTLY---THFETEKFSCLVMEF-CPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
L++ +HP + L+ T T++ + L + F DL T K P P + ++ +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++L L++LH +++RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF-------VGTHEYLAPEIIKGEGHGSAVD 476
+D KP+N + + +A+ AR SF V T Y APE++ + + VD
Sbjct: 144 RDLKPQNILVTSSGQIK--LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVD 201
Query: 477 WWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQP 510
W+ G E+ K F+GS + L +V+G P
Sbjct: 202 LWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V+E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V+E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 67
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 68 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 535 PQHR 538
P+ R
Sbjct: 249 PEER 252
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 20/181 (11%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA-QTERE------ 268
S + K +G GD G V CY ++V + + K L+A TER+
Sbjct: 49 SRIHIEKIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 269 ---ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
I+ DHP + L + + +V E+ G L T + G++ Q V +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM-LR 158
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPL 385
V + YL LG ++RDL NVLV + +SDF LS P ++ P+
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI 218
Query: 386 R 386
R
Sbjct: 219 R 219
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV 506
+ APE I SA D W+FG+ ++E+L +G+ P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ ++ + + ++YLH II+
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHAKSIIH 143
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S L R+G G G+VY + G +KV+D ++ + E +L+ H
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTP----EQFQAFRNEVAVLRKTRH 91
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ L+ + T+ +V ++C G L+ Q K+ Q + + ++YLH
Sbjct: 92 VNI-LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI-ARQTAQGMDYLH 149
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
II+RD+K N+ + E + + DF L+
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEGHG---SAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D +++GI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
Query: 513 FPE 515
P+
Sbjct: 256 SPD 258
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 238 SGTKCYFAMKVMDKASLAGRKKLLRAQTERE-------ILQSLDHPFLPTLYTHFETEKF 290
SGT Y AM V +A R+ L+ Q ++E +++ +P + +
Sbjct: 33 SGT-VYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 291 SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL 350
+VME+ GG L + + E + E L ALE+LH +I+RD+K +N+L
Sbjct: 92 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 351 VREDGHIMLSDFDLSLRCA-VSPTLIKASSLDAEPLRKNP 389
+ DG + L+DF CA ++P K S + P P
Sbjct: 149 LGMDGSVKLTDFGF---CAQITPEQSKRSEMVGTPYWMAP 185
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFN 505
P +++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 506 VV--GQP-LRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRG-ATEIKQHPFFE 555
+ G P L+ PE F RD + L + + KRG A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVE-----KRGSAKELLQHQFLK 274
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 85/203 (41%), Gaps = 31/203 (15%)
Query: 216 SHF--RLLKR---LGCGDIGSV----YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+HF R LKR LG G G V Y E T A+K + S G + + E
Sbjct: 4 THFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKE 61
Query: 267 REILQSLDHPFLPTLYTHFETEKFSC---LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFY 323
EIL++L H + Y TE L+MEF P G L K K +Q ++ Y
Sbjct: 62 IEILRNLYHENI-VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-Y 119
Query: 324 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAE 383
++ ++YL ++RDL NVLV + + + DF L+ KA D E
Sbjct: 120 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT----------KAIETDKE 169
Query: 384 PL-----RKNPVYCVQPACIEPS 401
R +PV+ P C+ S
Sbjct: 170 XXTVKDDRDSPVFWYAPECLMQS 192
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 238 SGTKCYFAMKVMDKASLAGRKKLLRAQTERE-------ILQSLDHPFLPTLYTHFETEKF 290
SGT Y AM V +A R+ L+ Q ++E +++ +P + +
Sbjct: 33 SGT-VYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 291 SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL 350
+VME+ GG L + + E + E L ALE+LH +I+RD+K +N+L
Sbjct: 92 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 351 VREDGHIMLSDFDLSLRCA-VSPTLIKASSLDAEPLRKNP 389
+ DG + L+DF CA ++P K S + P P
Sbjct: 149 LGMDGSVKLTDFGF---CAQITPEQSKRSXMVGTPYWMAP 185
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFN 505
P +++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 506 VV--GQP-LRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRG-ATEIKQHPFFE 555
+ G P L+ PE F RD + L + + KRG A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVE-----KRGSAKELLQHQFLK 274
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 207 RARDGVLGLSHFRLLKRLGCGDIGSVY---LSELSGTKCYFAMKVMDKASLAGRKKLLRA 263
+ D V+ + L K LG G+ GSV L + GT A+K M K + ++++
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEF 83
Query: 264 QTEREILQSLDHP-FLPTLYTHFETEKFSC----LVMEFCPGGDLHTL----RQKQPGKY 314
+E ++ HP + L E +++ F GDLHT R + K+
Sbjct: 84 LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKH 143
Query: 315 FPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
P Q + ++ ++ L +EYL ++RDL N ++R+D + ++DF LS
Sbjct: 144 IPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 535 PQHR 538
P+ R
Sbjct: 422 PEER 425
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 18 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 72
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ ++ + + ++YLH II+
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHAKSIIH 131
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA-QTERE------ 268
S + K +G GD G V CY ++V + + K L+A TER+
Sbjct: 49 SRIHIEKIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 269 ---ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
I+ DHP + L + + +V E+ G L T + G++ Q V +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM-LR 158
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
V + YL LG ++RDL NVLV + +SDF LS
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV 506
+ APE I SA D W+FG+ ++E+L +G+ P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + + +LG G+ GSV L T A+K + + ++ Q E +IL++
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 67
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L F+ ++ + LVME+ P G L Q+ + + Y +++
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 126
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 70
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+MEF P G L QK + + ++ Y +++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ-YTSQICKG 129
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 209 RDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
+ G+L + F +++++G G G V L + K Y+A+KV+ R + A ++
Sbjct: 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKK 87
Query: 269 ILQSLDHPFLPTLYT-HFETEKFSCLVMEFCPGG-DLHTLRQKQPGKYFPEQAVRFYVAE 326
I + Y F CL+ E P G L+ + + F + ++ Y E
Sbjct: 88 IQNDDINNNNIVKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIKLYCIE 145
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVRE 353
+L AL YL + + + DLKPEN+L+ +
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDD 172
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFK 495
S + T +Y APE+I G + D W+FG L EL G F+
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 238 SGTKCYFAMKVMDKASLAGRKKLLRAQTERE-------ILQSLDHPFLPTLYTHFETEKF 290
SGT Y AM V +A R+ L+ Q ++E +++ +P + +
Sbjct: 34 SGT-VYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 92
Query: 291 SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL 350
+VME+ GG L + + E + E L ALE+LH +I+RD+K +N+L
Sbjct: 93 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 149
Query: 351 VREDGHIMLSDFDLSLRCA-VSPTLIKASSLDAEPLRKNP 389
+ DG + L+DF CA ++P K S + P P
Sbjct: 150 LGMDGSVKLTDFGF---CAQITPEQSKRSXMVGTPYWMAP 186
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFN 505
P +++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 506 VV--GQP-LRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRG-ATEIKQHPFFE 555
+ G P L+ PE F RD + L + + KRG A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVE-----KRGSAKELIQHQFLK 275
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKA--SLAGRKKLLRAQTEREILQSLDH 275
+ +++ +G G G V + T A+K + A + K+ LR E +IL+ H
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKH 112
Query: 276 PFL--------PTL-YTHFETEKFSCLVMEFCPGGDLH-TLRQKQPGKYFPEQAVRFYVA 325
+ PT+ Y F++ +ME DLH + QP + VR+++
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---LTLEHVRYFLY 165
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 373
++L L+Y+H +I+RDLKP N+LV E+ + + DF ++ SP
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + + +LG G+ GSV L T A+K + + ++ Q E +IL++
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 68
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L F+ ++ + LVME+ P G L Q+ + + Y +++
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 127
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +L +G G G K +D S+ +K + +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 278 LPTLYTHF--ETEKFSCLVMEFCPGGDLHTLRQK--QPGKYFPEQAVRFYVAEVLLALEY 333
+ Y T +VME+C GGDL ++ K + +Y E+ V + ++ LAL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 334 LHMLG-----IIYRDLKPENVLVREDGHIMLSDFDLS 365
H +++RDLKP NV + ++ L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 424 KDRKPKNEI--GNQVSPLPEL----IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP N G Q L + I + + +FVGT Y++PE + + D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 478 WTFGIFLYELLFGKTPF 494
W+ G LYEL PF
Sbjct: 200 WSLGCLLYELCALMPPF 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +L +G G G K +D S+ +K + +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 278 LPTLYTHF--ETEKFSCLVMEFCPGGDLHTLRQK--QPGKYFPEQAVRFYVAEVLLALEY 333
+ Y T +VME+C GGDL ++ K + +Y E+ V + ++ LAL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 334 LHMLG-----IIYRDLKPENVLVREDGHIMLSDFDLS 365
H +++RDLKP NV + ++ L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 424 KDRKPKNEI--GNQVSPLPEL----IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP N G Q L + I + + +FVGT Y++PE + + D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 478 WTFGIFLYELLFGKTPF 494
W+ G LYEL PF
Sbjct: 200 WSLGCLLYELCALMPPF 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK---ASLAGRKKLLRAQTEREILQSLD 274
+R L+ +G G G+V + T A+K + + + L + RA E +L+ +
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK----RAYRELRLLKHMR 82
Query: 275 HPFLPTLYTHF---ET-EKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + L F ET + F+ LVM F G DL L + + E ++F V ++L
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK---LGEDRIQFLVYQML 138
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L Y+H GII+RDLKP N+ V ED + + DF L+
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 83/216 (38%), Gaps = 45/216 (20%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDWWT 479
+D KP N N+ L L +A ++ V T Y APE+I + VD W+
Sbjct: 152 RDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWS 211
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQP-----------------LRFPESPVV 519
G + E++ GKT FKGS + L V G P PE
Sbjct: 212 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 271
Query: 520 SFA---------ARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEI 570
FA A +L+ +LV + + R+ A E HP+FE +L P++
Sbjct: 272 DFASILTNASPLAVNLLEKMLVLDAEQRVT----AGEALAHPYFE----SLHDTEDEPQV 323
Query: 571 PKP----VEIERIPAPTSSTSEKTAPTMVPPNQRGS 602
K +++R + K + PP Q G+
Sbjct: 324 QKYDDSFDDVDRTLDEWKRVTYKEVLSFKPPRQLGA 359
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D LRQ + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + + +LG G+ GSV L T A+K + + ++ Q E +IL++
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 80
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L F+ ++ + LVME+ P G L Q+ + + Y +++
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 139
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 535 PQHR 538
P+ R
Sbjct: 247 PEER 250
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 535 PQHR 538
P+ R
Sbjct: 253 PEER 256
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 187 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAFLQEAQ----VMKKLRHEK 241
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 242 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDL 364
++RDL+ N+LV E+ ++DF L
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGL 327
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 535 PQHR 538
P+ R
Sbjct: 423 PEER 426
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +L +G G G K +D S+ +K + +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 278 LPTLYTHF--ETEKFSCLVMEFCPGGDLHTLRQK--QPGKYFPEQAVRFYVAEVLLALEY 333
+ Y T +VME+C GGDL ++ K + +Y E+ V + ++ LAL+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 334 LHMLG-----IIYRDLKPENVLVREDGHIMLSDFDLS 365
H +++RDLKP NV + ++ L DF L+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 424 KDRKPKNEI--GNQVSPLPEL----IAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDW 477
+D KP N G Q L + I E + FVGT Y++PE + + D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDI 199
Query: 478 WTFGIFLYELLFGKTPF 494
W+ G LYEL PF
Sbjct: 200 WSLGCLLYELCALMPPF 216
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T +V ++C G L+ K+ ++ + + ++YLH II+
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHAKSIIH 143
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 63
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 64 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 535 PQHR 538
P+ R
Sbjct: 245 PEER 248
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 535 PQHR 538
P+ R
Sbjct: 253 PEER 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S ++ +G G G V+L K A+K + + S++ + E E++ L H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIKEGSMSEDDFI----EEAEVMMKLSH 81
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P L LY + CLV EF G L + Q G F + + +V + YL
Sbjct: 82 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 140
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+I+RDL N LV E+ I +SDF ++
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMT 170
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESP 517
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 247
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
+ S ++ + P+ R A+ R
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSR 273
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S ++ +G G G V+L K A+K + + +++ + E E++ L H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 61
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P L LY + CLV EF G L + Q G F + + +V + YL
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 120
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+I+RDL N LV E+ I +SDF ++
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESP 517
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 227
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
+ S ++ + P+ R A+ R
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSR 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
L+Y+H II+RDLKP N+ V ED + + DF L
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ S L L + T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 224 LGCGDIGSVY---LSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSLDHPFLP 279
LG G G VY + G K A+K K +L ++K + +E I+++LDHP +
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM---SEAVIMKNLDHPHIV 88
Query: 280 TLYTHFETEKFSCLVMEFCPGGDL-HTL-RQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L E E + ++ME P G+L H L R K K + Y ++ A+ YL +
Sbjct: 89 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESI 144
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RD+ N+LV + L DF LS
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLS 172
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATL 503
++++PE I +A D W F + ++E+L FGK PF N+ +
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S ++ +G G G V+L K A+K + + +++ + E E++ L H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 64
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P L LY + CLV EF G L + Q G F + + +V + YL
Sbjct: 65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 123
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+I+RDL N LV E+ I +SDF ++
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMT 153
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESP 517
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 230
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
+ S ++ + P+ R A+ R
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPAFSR 256
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + K S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 161 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 221 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S ++ +G G G V+L K A+K + + +++ + E E++ L H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 61
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P L LY + CLV EF G L + Q G F + + +V + YL
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 120
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+I+RDL N LV E+ I +SDF ++
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESP 517
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 227
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
+ S ++ + P+ R A+ R
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSR 253
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 238 SGTKCYFAMKVMDKASLAGRKKLLRAQTERE-------ILQSLDHPFLPTLYTHFETEKF 290
SGT Y AM V +A R+ L+ Q ++E +++ +P + +
Sbjct: 34 SGT-VYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 92
Query: 291 SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVL 350
+VME+ GG L + + E + E L ALE+LH +I+R++K +N+L
Sbjct: 93 LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNIL 149
Query: 351 VREDGHIMLSDFDLSLRCA-VSPTLIKASSLDAEPLRKNP 389
+ DG + L+DF CA ++P K S++ P P
Sbjct: 150 LGMDGSVKLTDFGF---CAQITPEQSKRSTMVGTPYWMAP 186
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFN 505
P +++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 506 VV--GQP-LRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRG-ATEIKQHPFFE 555
+ G P L+ PE F RD + L + + KRG A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVE-----KRGSAKELIQHQFLK 275
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 74
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 133
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ + H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKIRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ + L+++G G G VY ++ + + FA+K K L + + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKE 56
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L H + LY T+K LV E DL L G + ++ ++L +
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG-LESVTAKSFLLQLLNGIA 114
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Y H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAPEIIKG-EGHGSA 474
+D KP+N + N+ L IA+ AR+ THE Y AP+++ G + + +
Sbjct: 124 RDLKPQNLLINREGELK--IADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 475 VDWWTFGIFLYELLFGKTPFKG---SGNRATLFNVVGQP 510
+D W+ G E++ G F G + +F ++G P
Sbjct: 182 IDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTP 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ + L+++G G G VY ++ + + FA+K K L + + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKE 56
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L H + LY T+K LV E DL L G + ++ ++L +
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG-LESVTAKSFLLQLLNGIA 114
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Y H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAPEIIKG-EGHGSA 474
+D KP+N + N+ L IA+ AR+ THE Y AP+++ G + + +
Sbjct: 124 RDLKPQNLLINREGELK--IADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Query: 475 VDWWTFGIFLYELLFGKTPFKG---SGNRATLFNVVGQP 510
+D W+ G E++ G F G + +F ++G P
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + + +LG G+ GSV L T A+K + + ++ Q E +IL++
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 64
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L F+ ++ LVME+ P G L Q+ + + Y +++
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKG 123
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL ++RDL N+LV + H+ ++DF L+
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S ++ +G G G V+L K A+K + + +++ + E E++ L H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 59
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P L LY + CLV EF G L + Q G F + + +V + YL
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 118
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+I+RDL N LV E+ I +SDF ++
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMT 148
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESP 517
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 225
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
+ S ++ + P+ R A+ R
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSR 251
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
+ + L+++G G G VY ++ + + FA+K K L + + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKE 56
Query: 273 LDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALE 332
L H + LY T+K LV E DL L G + ++ ++L +
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG-LESVTAKSFLLQLLNGIA 114
Query: 333 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Y H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 424 KDRKPKNEIGNQVSPLPELIAEPTEARSMSF---VGTHE-----YLAPEIIKG-EGHGSA 474
+D KP+N + N+ L IA+ AR+ THE Y AP+++ G + + +
Sbjct: 124 RDLKPQNLLINREGELK--IADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 475 VDWWTFGIFLYELLFGKTPFKG---SGNRATLFNVVGQP 510
+D W+ G E++ G F G + +F ++G P
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ S L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 151 RDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 67
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 126
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 224 LGCGDIGSVY---LSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSLDHPFLP 279
LG G G VY + G K A+K K +L ++K + +E I+++LDHP +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM---SEAVIMKNLDHPHIV 72
Query: 280 TLYTHFETEKFSCLVMEFCPGGDL-HTL-RQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L E E + ++ME P G+L H L R K K + Y ++ A+ YL +
Sbjct: 73 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESI 128
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RD+ N+LV + L DF LS
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLS 156
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATL 503
++++PE I +A D W F + ++E+L FGK PF N+ +
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 224 LGCGDIGSVY---LSELSGTKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSLDHPFLP 279
LG G G VY + G K A+K K +L ++K + +E I+++LDHP +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM---SEAVIMKNLDHPHIV 76
Query: 280 TLYTHFETEKFSCLVMEFCPGGDL-HTL-RQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L E E + ++ME P G+L H L R K K + Y ++ A+ YL +
Sbjct: 77 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESI 132
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RD+ N+LV + L DF LS
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLS 160
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATL 503
++++PE I +A D W F + ++E+L FGK PF N+ +
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 70
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 129
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 66
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 125
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 369
L+Y+H II+RDLKP N+ V ED + + DF L+ A
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T +V T Y APEI+ H VD W+
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 98
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 157
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 31 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 81
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 82 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 138
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 139 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 193
Query: 392 CVQPACI 398
P CI
Sbjct: 194 WYAPECI 200
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 231
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
RL +LG G G V++ +GT A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 535 PQHR 538
P+ R
Sbjct: 256 PEER 259
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 85
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 144
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 33 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 83
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 84 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 140
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 195
Query: 392 CVQPACI 398
P CI
Sbjct: 196 WYAPECI 202
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 33 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 83
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 84 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 140
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 195
Query: 392 CVQPACI 398
P CI
Sbjct: 196 WYAPECI 202
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 73
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 132
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+L+KRLG G G V++ +G A+K + +++ L AQ I++ L H
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGTMSPESFLEEAQ----IMKKLKHDK 65
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L LY E +V E+ G L + G+ + A+V + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLS 365
I+RDL+ N+LV ++DF L+
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 476 DWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKE 534
D W+FGI L EL+ G+ P+ G NR L V + R P + +L+ K+
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVL-EQVERGYRMPCPQDCPISLHELMIHCWKKD 246
Query: 535 PQHR 538
P+ R
Sbjct: 247 PEER 250
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 65
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 124
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 72
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 131
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 154 RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ S L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 155 RDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 215 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S ++ +G G G V+L K A+K + + +++ + E E++ L H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSH 62
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P L LY + CLV EF G L + Q G F + + +V + YL
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 121
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+I+RDL N LV E+ I +SDF ++
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMT 151
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESP 517
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 228
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
+ S ++ + P+ R A+ R
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSR 254
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 85
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 144
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 369
L+Y+H II+RDLKP N+ V ED + + DF L+ A
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T +V T Y APEI+ H VD W+
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA 369
L+Y+H II+RDLKP N+ V ED + + DF L+ A
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T +V T Y APEI+ H VD W+
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 67
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 126
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 91
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 160 RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 220 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 71
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 130
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
RLG G G V+ + T A+K + R ++ R + E L P + LY
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVE-ELVACAGLSSPRIVPLY 130
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ + ME GG L L KQ G PE +Y+ + L LEYLH I++
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQL-IKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 343 DLKPENVLVREDG-HIMLSDFDLSL 366
D+K +NVL+ DG L DF +L
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHAL 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 67
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 126
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + T S VGT Y+ PE IK D W+
Sbjct: 200 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 311
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 312 RIS----IPELLAHPYVQ 325
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGG-DLHTLRQKQPGKYFPEQAVRFYVAEVL 328
++++D PF T Y E + ME D + G+ PE + ++
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 163
Query: 329 LALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS--LRCAVSPTLIKASSLDAEPL 385
ALE+LH L +I+RD+KP NVL+ G + + DF +S L +V+ T+ P
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE 223
Query: 386 RKNP 389
R NP
Sbjct: 224 RINP 227
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 17 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 67
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 68 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 179
Query: 392 CVQPACI 398
P CI
Sbjct: 180 WYAPECI 186
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 154 RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 11 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 61
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 62 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 118
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 119 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 173
Query: 392 CVQPACI 398
P CI
Sbjct: 174 WYAPECI 180
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 211
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 127
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 128 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 17 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 67
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 68 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 124
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-----KWPVK 179
Query: 392 CVQPACI 398
P CI
Sbjct: 180 WYAPECI 186
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 23 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 73
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 74 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 130
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 185
Query: 392 CVQPACI 398
P CI
Sbjct: 186 WYAPECI 192
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 294
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 295 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 133
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 134 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFA 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 103
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 172 RDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 232 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 161 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 221 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 161 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 221 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 99
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 168 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 228 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 211 GVLGL-----SHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAG---RKKL 260
G +G+ + F L+++G G+ GSV+ + L G C +A+K K LAG +
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDG--CIYAIK-RSKKPLAGSVDEQNA 57
Query: 261 LRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTL--RQKQPGKYFPEQ 318
LR +L H + ++ + + + E+C GG L + YF E
Sbjct: 58 LREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEA 115
Query: 319 AVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
++ + +V L Y+H + +++ D+KP N+ +
Sbjct: 116 ELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 151 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 281
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 207 RARDGVLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKASLAGRKKLLR 262
+A+ +L + + +K LG G G+VY + E K A+K++++ + G K +
Sbjct: 29 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVE 86
Query: 263 AQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
E I+ S+DHP L L + LV + P G L + Q +
Sbjct: 87 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN-IGSQLLLN 144
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ ++ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + T S VGT Y+ PE IK D W+
Sbjct: 156 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 209
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 210 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 267
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 268 RIS----IPELLAHPYVQ 281
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 14 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 71
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 128
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 129 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 157
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 229 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 151 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMK----------VMDKASLAGRKKLLRAQTEREILQ 271
K LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 13 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 63
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
LD+P++ + E E + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 64 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 120
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVY 391
+YL ++RDL NVL+ + +SDF LS KA + K PV
Sbjct: 121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPVK 175
Query: 392 CVQPACI 398
P CI
Sbjct: 176 WYAPECI 182
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
++ APE I S D W+FG+ ++E +G+ P++G
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 154 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 79
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 136
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 148 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 207
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 208 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 261
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 91
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 160 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 220 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 151 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 211 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 216 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 24/194 (12%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 82 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 342 RDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACI 398
RD+KPEN+L R + + L+DF + +L EP C P +
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL-------TEP-------CYTPYYV 184
Query: 399 EPSCIQPSCVTPTC 412
P + P +C
Sbjct: 185 APEVLGPEKYDKSC 198
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 205 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 82 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 78
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 135
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 147 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 206
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 207 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 260
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 77
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 146 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 206 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV S + A+K + + S+ K+ R E +L+ + H
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 109
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 166
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 167 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 178 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWS 237
Query: 480 FGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAAR 524
G + ELL G+T F G+ + N + Q +R +P S +R
Sbjct: 238 VGCIMAELLTGRTLFPGTDH----INQLQQIMRLTGTPPASVISR 278
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + T S VGT Y+ PE IK D W+
Sbjct: 200 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 311
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 312 RIS----IPELLAHPYVQ 325
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 103
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 172 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 232 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 216 SHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAG---RKKLLRAQTEREIL 270
+ F L+++G G+ GSV+ + L G C +A+K K LAG + LR +L
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDG--CIYAIK-RSKKPLAGSVDEQNALREVYAHAVL 63
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTL--RQKQPGKYFPEQAVRFYVAEVL 328
H + ++ + + + E+C GG L + YF E ++ + +V
Sbjct: 64 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 329 LALEYLHMLGIIYRDLKPENVLV 351
L Y+H + +++ D+KP N+ +
Sbjct: 122 RGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 77
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 146 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 206 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 243
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 244 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 280
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 82
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 83 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 250 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 88
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 89 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + T S VGT Y+ PE IK D W+
Sbjct: 152 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 205
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 206 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 263
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 264 RIS----IPELLAHPYVQ 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 10 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 67
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 124
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 125 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 153
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 248
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 249 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 285
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 87
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 88 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 215 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 215 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 216 SHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAG---RKKLLRAQTEREIL 270
+ F L+++G G+ GSV+ + L G C +A+K K LAG + LR +L
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDG--CIYAIK-RSKKPLAGSVDEQNALREVYAHAVL 65
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTL--RQKQPGKYFPEQAVRFYVAEVL 328
H + ++ + + + E+C GG L + YF E ++ + +V
Sbjct: 66 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 329 LALEYLHMLGIIYRDLKPENVLV 351
L Y+H + +++ D+KP N+ +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 154 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 214 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 216 SHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAG---RKKLLRAQTEREIL 270
+ F L+++G G+ GSV+ + L G C +A+K K LAG + LR +L
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDG--CIYAIK-RSKKPLAGSVDEQNALREVYAHAVL 65
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTL--RQKQPGKYFPEQAVRFYVAEVL 328
H + ++ + + + E+C GG L + YF E ++ + +V
Sbjct: 66 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 329 LALEYLHMLGIIYRDLKPENVLV 351
L Y+H + +++ D+KP N+ +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 251 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 89
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 90 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ V T Y APEI+ H VD W+
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 229 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + T S VGT Y+ PE IK D W+
Sbjct: 153 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 207 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 264
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 265 RIS----IPELLAHPYVQ 278
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 11 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 68
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 125
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 126 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 154
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + T S VGT Y+ PE IK D W+
Sbjct: 172 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 283
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 284 RIS----IPELLAHPYVQ 297
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 30 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L P + LY + + ME GG L L KQ G PE +Y+ + L L
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL-IKQMG-CLPEDRALYYLGQALEGL 163
Query: 332 EYLHMLGIIYRDLKPENVLVREDG-HIMLSDFDLSL 366
EYLH I++ D+K +NVL+ DG L DF +L
Sbjct: 164 EYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 199
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 99
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 168 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 228 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R+ TE HP+
Sbjct: 259 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 97
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 98 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 288 EKFSCLVMEFCPGGDLHTLRQK--QPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLK 345
K+ ++ME+ P LH + + + G+ P + Y+ ++ A+ ++H LGI +RD+K
Sbjct: 110 NKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 346 PENVLVR-EDGHIMLSDF 362
P+N+LV +D + L DF
Sbjct: 169 PQNLLVNSKDNTLKLCDF 186
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 32/133 (24%)
Query: 451 SMSFVGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV-- 507
S++ + + Y APE++ G + ++D W+ G EL+ GK F G + L ++
Sbjct: 198 SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Query: 508 -GQP--------------LRFPESPVVSF----------AARDLIRGLLVKEPQHRLAYK 542
G P +RFP + A DL+ +L EP R+
Sbjct: 258 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI--- 314
Query: 543 RGATEIKQHPFFE 555
E HPFF+
Sbjct: 315 -NPYEAMAHPFFD 326
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQT---EREILQS 272
+ +RL LG G G+V+ + A+KV+ + + G L + T E +L
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 273 LD----HPFLPTLYTHFETEKFSCLVMEF-CPGGDLHT-LRQKQPGKYFPEQAVRFYVAE 326
+ HP + L FET++ LV+E P DL + +K P E R + +
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQ 147
Query: 327 VLLALEYLHMLGIIYRDLKPENVLV 351
V+ A+++ H G+++RD+K EN+L+
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILI 172
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 453 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I + + H W+ GI LY+++ G PF+ ++ L
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAEL 250
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHR 538
FP VS LIR L +P R
Sbjct: 251 HFPAH--VSPDCCALIRRCLAPKPSSR 275
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKA--SLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+G G G VYL+ A+K +++ L K++LR T IL L ++ L
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLKSDYIIRL 92
Query: 282 YTHFETE---KFSCL--VMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
+ E KF L V+E DL L K P + EQ V+ + +LL +++H
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIA-DSDLKKLF-KTPI-FLTEQHVKTILYNLLLGEKFIHE 149
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GII+RDLKP N L+ +D + + DF L+
Sbjct: 150 SGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 259 KLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVME-FCPGGDLHTLRQKQPGKYFPE 317
KL + E IL ++H + + FE + F LVME G DL + P E
Sbjct: 72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDE 129
Query: 318 QAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
+ +++ A+ YL + II+RD+K EN+++ ED I L DF
Sbjct: 130 PLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 453 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
+F GT EY APE++ G + G ++ W+ G+ LY L+F + PF L V +
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAI 241
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATE 547
P +VS L+ GLL P+ R ++ T+
Sbjct: 242 HPPY--LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 258 KKLLRAQTEREILQSLDHPF---LPTLYTHFETEKFS--CLVMEFCPGGDLHTLRQKQPG 312
K++LR E +L HP L ++ HFE LV E DL + Q
Sbjct: 74 KRVLR---EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRI 129
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
P Q +++++ +LL L LH G+++RDL P N+L+ ++ I + DF+L+
Sbjct: 130 VISP-QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 445 EPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL 503
+ +A +V Y APE++ + +G VD W+ G + E+ K F+GS T
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TF 239
Query: 504 FNVVGQPLRFPESP----VVSF---AARDLIRGLLVKEP 535
+N + + + +P VV F +ARD +R L P
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP 278
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 258 KKLLRAQTEREILQSLDHPF---LPTLYTHFETEKFS--CLVMEFCPGGDLHTLRQKQPG 312
K++LR E +L HP L ++ HFE LV E DL + Q
Sbjct: 74 KRVLR---EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRI 129
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
P Q +++++ +LL L LH G+++RDL P N+L+ ++ I + DF+L+
Sbjct: 130 VISP-QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 445 EPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL 503
+ +A +V Y APE++ + +G VD W+ G + E+ K F+GS T
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TF 239
Query: 504 FNVVGQPLRFPESP----VVSF---AARDLIRGLLVKEP 535
+N + + + +P VV F +ARD +R L P
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP 278
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 229 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ FV T Y APEI+ H VD W+
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 205 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 20/156 (12%)
Query: 218 FRLLKRLGCGDIGSVY-LSELSGTKCYFAMKVM-------DKASLAGRKKLLRAQTEREI 269
F+ L RLG G G V+ + + Y + M D+A +KL + ++
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRA-----RKLAEVGSHEKV 113
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
Q HP L +E L E C P H + G PE V Y+ + L
Sbjct: 114 GQ---HPCCVRLEQAWEEGGILYLQTELCGPSLQQHC---EAWGASLPEAQVWGYLRDTL 167
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
LAL +LH G+++ D+KP N+ + G L DF L
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 205 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 211 GVLGLS-HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
GVL + +FR+ K++GCG+ G + L + T Y A+K+ S A + L R
Sbjct: 3 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFY 58
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEV 327
Q +P +Y K++ +V+E DL L + F + V ++
Sbjct: 59 KQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQL 114
Query: 328 LLALEYLHMLGIIYRDLKPENVLVREDGH-----IMLSDFDLS 365
+ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
R+G G G V+ + T A+K + R ++ R + E L P + LY
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVE-ELVACAGLSSPRIVPLY 132
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
+ + ME GG L L KQ G PE +Y+ + L LEYLH I++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQL-IKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 343 DLKPENVLVREDG-HIMLSDFDLSL 366
D+K +NVL+ DG L DF +L
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHAL 215
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 163 DHEHRKLRLIDWGLA 177
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ FV T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ FV T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 90
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 147
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 159 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 218
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 219 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 272
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E D L Q + +RFY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 115 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 352 -REDGHIMLSDFDLS 365
E + L D+ L+
Sbjct: 170 DHEHRKLRLIDWGLA 184
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 215 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 207 RARDGVLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKASLAGRKKLLR 262
+A+ +L + + +K LG G G+VY + E K A+K++++ + G K +
Sbjct: 6 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVE 63
Query: 263 AQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
E I+ S+DHP L L + LV + P G L + Q +
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN-IGSQLLLN 121
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ ++ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 73/193 (37%), Gaps = 51/193 (26%)
Query: 318 QAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV-REDGHIMLSDFDLSLRCAVSPTLIK 376
Q VR Y+ + AL+ +H GI++RD+KP N L R L DF L+ T I+
Sbjct: 117 QEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ--GTHDTKIE 174
Query: 377 ASSLDAEPLRKNPVYCVQPACIEPSCIQPSCVTPTCFSPRLFSSKSKKDRKPKNEIGNQV 436
VQ + C Q C C S R QV
Sbjct: 175 LLKF------------VQSEAQQERCSQNKC--SICLSRR-----------------QQV 203
Query: 437 SPLPELIAEPTEARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPF- 494
+P GT + APE++ K +A+D W+ G+ LL G+ PF
Sbjct: 204 APR---------------AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248
Query: 495 KGSGNRATLFNVV 507
K S + L ++
Sbjct: 249 KASDDLTALAQIM 261
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + + ++ VGT Y+ PE IK D W+
Sbjct: 172 IANQMQPDXXXVVKDSQ------VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 283
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 284 RIS----IPELLAHPYVQ 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 30 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L + +LL+ +G G+ G V L + G K A+K + + A + L E ++
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATA--QAFL---AEASVMTQ 242
Query: 273 LDHPFLPTLYTHFETEKFSC-LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L H L L EK +V E+ G L + + + + +V A+
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
EYL ++RDL NVLV ED +SDF L+
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 494
++ APE ++ + + D W+FGI L+E+ FG+ P+
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + D+ L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L + +LL+ +G G+ G V L + G K A+K + + A + L E ++
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATA--QAFL---AEASVMTQ 61
Query: 273 LDHPFLPTLYTHFETEKFSC-LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L H L L EK +V E+ G L + + + + +V A+
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
EYL ++RDL NVLV ED +SDF L+
Sbjct: 122 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 494
++ APE ++ + D W+FGI L+E+ FG+ P+
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV-----VGQ-PLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + +A + +GQ
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATP 567
PE VS A+ LIR LL +P RL T+ HP+ +N +++ TP
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPW---INQSMVVPQTP 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 351
++ME GG+L + Q++ + F E+ + ++ A+++LH I +RD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 352 --REDGHIMLSDFDLS 365
+D + L+DF +
Sbjct: 163 SKEKDAVLKLTDFGFA 178
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 68
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L QK + + ++ Y +++
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICKG 127
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+R+L N+LV + + + DF L+
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 211 GVLGLS-HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
GVL + +FR+ K++GCG+ G + L + T Y A+K+ S A + L R
Sbjct: 3 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFY 58
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEV 327
Q +P +Y K++ +V+E DL L + F + V ++
Sbjct: 59 KQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQL 114
Query: 328 LLALEYLHMLGIIYRDLKPENVLVREDGH-----IMLSDFDLS 365
+ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 217 HFRLLKRLGCGDIGSVYLSELS----GTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
H + L++LG G+ GSV + T A+K + ++ + L + E EIL+S
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKS 70
Query: 273 LDHPFLPTL--YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
L H + + + L+ME+ P G L Q + + ++ Y +++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ-YTSQICKG 129
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+EYL I+RDL N+LV + + + DF L+
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV-----VGQ-PLRF 513
Y+APE++ E + + D W+ G+ +Y LL G PF + +A + +GQ
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 235
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATP 567
PE VS A+ LIR LL +P RL T+ HP+ +N +++ TP
Sbjct: 236 PEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPW---INQSMVVPQTP 282
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV- 351
++ME GG+L + Q++ + F E+ + ++ A+++LH I +RD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 352 --REDGHIMLSDFDLS 365
+D + L+DF +
Sbjct: 144 SKEKDAVLKLTDFGFA 159
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L + +LL+ +G G+ G V L + G K A+K + + A + L E ++
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATA--QAFL---AEASVMTQ 70
Query: 273 LDHPFLPTLYTHFETEKFSC-LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L H L L EK +V E+ G L + + + + +V A+
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
EYL ++RDL NVLV ED +SDF L+
Sbjct: 131 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 494
++ APE ++ + + D W+FGI L+E+ FG+ P+
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 211 GVLGLS-HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
GVL + +FR+ K++GCG+ G + L + T Y A+K+ S A + L R
Sbjct: 24 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFY 79
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEV 327
Q +P +Y K++ +V+E DL L + F + V ++
Sbjct: 80 KQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQL 135
Query: 328 LLALEYLHMLGIIYRDLKPENVLVREDGH-----IMLSDFDLS 365
+ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 136 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L + +LL+ +G G+ G V L + G K A+K + + A + L E ++
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATA--QAFL---AEASVMTQ 55
Query: 273 LDHPFLPTLYTHFETEKFSC-LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
L H L L EK +V E+ G L + + + + +V A+
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
EYL ++RDL NVLV ED +SDF L+
Sbjct: 116 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 494
++ APE ++ + + D W+FGI L+E+ FG+ P+
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
++G RLL++LG G G V E SG A+K + L+ + + E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ SLDH L LY T +V E P G L +K G + R Y +V
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 125
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+ YL I+RDL N+L+ + + DF L
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 263 AQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
A E ++L+ L H L L + +K LV EF L L G Q V+
Sbjct: 71 AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQK 128
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Y+ +++ + + H II+RD+KPEN+LV + G + L DF +
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 424 KDRKPKNEIGNQ--VSPLPEL-----IAEPTEARSMSFVGTHEYLAPEIIKGE-GHGSAV 475
+D KP+N + +Q V L + +A P E V T Y APE++ G+ +G AV
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE-VATRWYRAPELLVGDVKYGKAV 206
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
D W G + E+ G+ F G + L++++
Sbjct: 207 DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 217 HFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSL 273
F L + LG G+ GSV ++L G+ A+K++ KA + + E ++
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEF 82
Query: 274 DHPFLPTLYTHFETEK------FSCLVMEFCPGGDLHTL----RQKQPGKYFPEQAVRFY 323
DHP + L + +++ F GDLH R + P Q + +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 324 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ ++ +EYL I+RDL N ++ ED + ++DF LS
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQPLRFPESP 517
++LA E + + D W FG+ ++E++ G+TP+ G N A ++N + R + P
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-AEIYNYLIGGNRLKQPP 262
Query: 518 VVSFAARDLIRGLLVKEPQHR 538
DL+ +P+ R
Sbjct: 263 ECMEEVYDLMYQCWSADPKQR 283
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+FR+ K++GCG+ G + L + T Y A+K+ S A + L E + L
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHL-----EYRFYKQLSAT 59
Query: 277 -FLPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEY 333
+P +Y K++ +V+E DL L + F + V +++ +EY
Sbjct: 60 EGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLITRMEY 115
Query: 334 LHMLGIIYRDLKPENVLVREDG-----HIMLSDFDLS 365
+H +IYRD+KPEN LV G I + DF L+
Sbjct: 116 VHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 217 HFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
H+ +++LG G V L E ++A+K + R++ AQ E ++ + +HP
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE---AQREADMHRLFNHP 86
Query: 277 FLPTLYTHFETEKFS----CLVMEFCPGGDL--HTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L + E+ + L++ F G L R K G + E + + + +
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
LE +H G +RDLKP N+L+ ++G +L D
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 457 THEYLAPEIIKGEGH---GSAVDWWTFGIFLYELLFGKTPFK---GSGNRATLFNVVGQP 510
T Y APE+ + H D W+ G LY ++FG+ P+ G+ L V
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL--AVQNQ 263
Query: 511 LRFPESPVVSFAARDLIRGLLVKEPQHR 538
L P+SP S A L+ ++ +P R
Sbjct: 264 LSIPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 432 IGNQVSPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 480
I NQ+ P + T S VG Y+ PE IK D W+
Sbjct: 200 IANQMQP------DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 481 GIFLYELLFGKTPFKGSGNRATLFNVVGQP---LRFPESPVVSFAARDLIRGLLVKEPQH 537
G LY + +GKTPF+ N+ + + + P + FP+ P +D+++ L ++P+
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 311
Query: 538 RLAYKRGATEIKQHPFFE 555
R++ E+ HP+ +
Sbjct: 312 RIS----IPELLAHPYVQ 325
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+ +LK++G G V+ L+ K +A+K ++ A + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 278 --LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
+ LY + T+++ +VME C DL++ +K+ K + Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 336 MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
GI++ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LK LG G G V + G + A+K++ + S++ + + E +++ +L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 82
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY ++ ++ E+ G L ++ ++ +Q + +V A+EYL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 141
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N LV + G + +SDF LS
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 463 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRF 513
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 240
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGG-DLHTLRQKQPGKYFPEQAVRFYVAEVL 328
++++D PF T Y E + ME D + G+ PE + ++
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 329 LALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
ALE+LH L +I+RD+KP NVL+ G + + DF +S
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + D L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + D L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
L+Y+H II+RDLKP N+ V ED + + D
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K++ A R+ L RA I++ +D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +VME GG+L + Q + + F E+ + + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 468 GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRFPESPVVSF 521
GE + + D W+ G+ +Y LL G PF + A T + PE VS
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231
Query: 522 AARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
+ LIR LL EP R+ TE HP+
Sbjct: 232 EVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 260
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
++G RLL++LG G G V E SG A+K + L+ + + E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ SLDH L LY T +V E P G L +K G + R Y +V
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 131
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+ YL I+RDL N+L+ + + DF L
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LK LG G G V + G + A+K++ + S++ + + E +++ +L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 82
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY ++ ++ E+ G L ++ ++ +Q + +V A+EYL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 141
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N LV + G + +SDF LS
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 219 RLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF- 277
R+ K++GCG+ G + L + T Y A+K+ S A + L E + L
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHL-----EYRFYKQLGSAGE 57
Query: 278 -LPTLYTHFETEKFSCLVMEFCPGG--DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYL 334
LP +Y K++ +V+E DL L + F + V ++L +EY+
Sbjct: 58 GLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLLSRMEYV 113
Query: 335 HMLGIIYRDLKPENVLVREDGH-----IMLSDFDLS 365
H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 114 HSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
++G RLL++LG G G V E SG A+K + L+ + + E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ SLDH L LY T +V E P G L +K G + R Y +V
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 131
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+ YL I+RDL N+L+ + + DF L
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 149 RDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 209 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + Q + V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + F L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 20/184 (10%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLR-AQTERE--- 268
L S ++ + +G G+ G V C +K+ K +A K L+ TE++
Sbjct: 40 LDASCIKIERVIGAGEFGEV---------CSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD 90
Query: 269 ------ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
I+ DHP + L K +V+EF G L +K G++ Q V
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGM 150
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDA 382
+ + + YL +G ++RDL N+LV + +SDF LS P + ++
Sbjct: 151 -LRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 383 EPLR 386
P+R
Sbjct: 210 IPVR 213
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE I+ SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 268
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
++G RLL++LG G G V E SG A+K + L+ + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ SLDH L LY T +V E P G L +K G + R Y +V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 121
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+ YL I+RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 424 KDRKPKNEIGNQVSPLPEL---IAEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWT 479
+D KP N N+ L L +A T+ +V T Y APEI+ H VD W+
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 480 FGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
G + ELL G+T F G+ + L +VG P + S +AR+ I+ L
Sbjct: 205 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDK--ASLAGRKKLLRAQTEREILQSLDH 275
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 276 PFLPTLYTHF----ETEKFS-CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLA 330
+ L F E+F+ ++ G DL+ + + + V+F + ++L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK---LTDDHVQFLIYQILRG 133
Query: 331 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
L+Y+H II+RDLKP N+ V ED + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 132
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 513 FPE 515
P+
Sbjct: 233 SPD 235
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLH-TLRQKQPGKYFPEQAVRFYVAEVL 328
L ++HP + LY CLVME+ GG L+ L +P Y+ + +
Sbjct: 56 LSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 329 LALEYLHML---GIIYRDLKPENVLVREDGHIM-LSDFDLSLRCAVSPTLIKASSLDAEP 384
+ YLH + +I+RDLKP N+L+ G ++ + DF + T K S+
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA----- 168
Query: 385 LRKNPVYCVQPACIEPSCIQPSCVTPTC--FSPRLFSSKSKKDRKPKNEIGN 434
A + P + S + C FS + + RKP +EIG
Sbjct: 169 -----------AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 209
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 501
G+ ++APE+ +G + D +++GI L+E++ + PF G A
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL--- 260
+AV VL L +++G G+ G V+ L A+K + R+ L
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPD 154
Query: 261 LRAQ--TEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQ 318
L+A+ E IL+ HP + L ++ +VME GGD T + + G +
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVK 213
Query: 319 AVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ V + +EYL I+RDL N LV E + +SDF +S
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRAT 502
++ APE + + S D W+FGI L+E G +P+ N+ T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 132
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 513 FPE 515
P+
Sbjct: 233 SPD 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
++G RLL++LG G G V E SG A+K + L+ + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ SLDH L LY T +V E P G L +K G + R Y +V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 121
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+ YL I+RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 16 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 70
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 129
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 513 FPE 515
P+
Sbjct: 230 SPD 232
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 34 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 88
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 147
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLA 171
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 513 FPE 515
P+
Sbjct: 248 SPD 250
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQS 272
L+ F ++ LG G G V+ ++ C +A+K + L R+ L R + RE+ L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIK---RIRLPNRE-LAREKVMREVKALAK 59
Query: 273 LDHPFLPTLYTHF----ETEK--------FSCLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
L+HP + + + TEK + + M+ C +L + E++V
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 321 RFYV-AEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
++ ++ A+E+LH G+++RDLKP N+ D + + DF L
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA-TLF 504
P AR VGT Y++PE I G + VD ++ G+ L+ELL+ PF R TL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238
Query: 505 NVVGQPLRFP 514
+V + L+FP
Sbjct: 239 DV--RNLKFP 246
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
++G RLL++LG G G V E SG A+K + L+ + + E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ SLDH L LY T +V E P G L +K G + R Y +V
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 125
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+ YL I+RDL N+L+ + + DF L
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 155
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 513 FPE 515
P+
Sbjct: 256 SPD 258
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E+ D KQ + + +RFY+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 111 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 25/171 (14%)
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLH-TLRQKQPGKYFPEQAVRFYVAEVL 328
L ++HP + LY CLVME+ GG L+ L +P Y+ + +
Sbjct: 55 LSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 329 LALEYLHML---GIIYRDLKPENVLVREDGHIM-LSDFDLSLRCAVSPTLIKASSLDAEP 384
+ YLH + +I+RDLKP N+L+ G ++ + DF + T K S+
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA----- 167
Query: 385 LRKNPVYCVQPACIEPSCIQPSCVTPTC--FSPRLFSSKSKKDRKPKNEIG 433
A + P + S + C FS + + RKP +EIG
Sbjct: 168 -----------AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 207
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 501
G+ ++APE+ +G + D +++GI L+E++ + PF G A
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME +L + Q + + +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L+ +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 127
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 513 FPE 515
P+
Sbjct: 228 SPD 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 155
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 513 FPE 515
P+
Sbjct: 256 SPD 258
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL--- 260
+AV VL L +++G G+ G V+ L A+K + R+ L
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPD 154
Query: 261 LRAQ--TEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQ 318
L+A+ E IL+ HP + L ++ +VME GGD T + + G +
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVK 213
Query: 319 AVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ V + +EYL I+RDL N LV E + +SDF +S
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRAT 502
++ APE + + S D W+FGI L+E G +P+ N+ T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRK--KLLRAQTEREILQSLDHPFLP 279
+++G G G+V+ +E G+ A+K++ + + + LR E I++ L HP +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDV--AVKILMEQDFHAERVNEFLR---EVAIMKRLRHPNIV 97
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVA-EVLLALEYLHMLG 338
+V E+ G L+ L K + ++ R +A +V + YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 339 --IIYRDLKPENVLVREDGHIMLSDFDLS 365
I++RDLK N+LV + + + DF LS
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVG---QPLR 512
GT E++APE+++ E D ++FG+ L+EL + P+ G+ N A + VG + L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRLE 259
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAY 541
P + AA +I G EP R ++
Sbjct: 260 IPRNLNPQVAA--IIEGCWTNEPWKRPSF 286
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LK LG G G V + G + A+K++ + S++ + + E +++ +L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 67
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY ++ ++ E+ G L ++ ++ +Q + +V A+EYL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 126
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N LV + G + +SDF LS
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 127
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 513 FPE 515
P+
Sbjct: 228 SPD 230
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LK LG G G V + G + A+K++ + S++ + + E +++ +L H L
Sbjct: 19 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 73
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY ++ ++ E+ G L ++ ++ +Q + +V A+EYL
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 132
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N LV + G + +SDF LS
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 41 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 95
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T+ +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 154
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLA 178
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 513 FPE 515
P+
Sbjct: 255 SPD 257
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LK LG G G V + G + A+K++ + S++ + + E +++ +L H L
Sbjct: 8 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 62
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY ++ ++ E+ G L ++ ++ +Q + +V A+EYL
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 121
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N LV + G + +SDF LS
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LK LG G G V + G + A+K++ + S++ + + E +++ +L H L
Sbjct: 12 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 66
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY ++ ++ E+ G L ++ ++ +Q + +V A+EYL
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 125
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N LV + G + +SDF LS
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTERE 268
++G RLL++LG G G V E SG A+K + L+ + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ SLDH L LY T +V E P G L +K G + R Y +V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVA 121
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
+ YL I+RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE +K A D W FG+ L+E+ +G+ P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA------TLFNVVGQPLRF 513
Y+APE++ E + + D W+ G+ Y LL G PF + A T
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPN 288
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
PE VS + LIR LL EP R TE HP+
Sbjct: 289 PEWSEVSEEVKXLIRNLLKTEPTQRXT----ITEFXNHPWI 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLL--RAQTEREILQSLDHPFLPTL 281
LG G G V T+ FA+K + A R+ L RA I++ +D L
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 127
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
Y K +V E GG+L + Q + + F E+ + A++YLH + I +
Sbjct: 128 YA---GRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAH 184
Query: 342 RDLKPENVLV---REDGHIMLSDFDLS 365
RD+KPEN+L R + + L+DF +
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L + L+K+LG G G V+ S T A+K + A R E IL L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELS 66
Query: 275 -HPFLPTLYTHF--ETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
H + L + ++ LV ++ DLH + + + +Q V V +++ +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYV---VYQLIKVI 122
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+YLH G+++RD+KP N+L+ + H+ ++DF LS
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 453 SFVGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
+V T Y APEI+ G + +D W+ G L E+L GK F GS L ++G +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VI 247
Query: 512 RFPES 516
FP +
Sbjct: 248 DFPSN 252
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LK LG G G V + G + A+K++ + S++ + + E +++ +L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 67
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
LY ++ ++ E+ G L ++ ++ +Q + +V A+EYL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 126
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
++RDL N LV + G + +SDF LS
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + KY
Sbjct: 60 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 113
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 172
Query: 376 KAS 378
KAS
Sbjct: 173 KAS 175
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 30/206 (14%)
Query: 203 IQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSE---LSGTK--CYFAMKVMDKASLAGR 257
+Q ++ RD VL + LG G G V+L+E LS TK A+K + +LA R
Sbjct: 9 VQHIKRRDIVLK-------RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR 61
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYF- 315
K Q E E+L +L H + Y +V E+ GDL+ LR P
Sbjct: 62 KDF---QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 316 ----PEQA--------VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 363
P QA + +++ + YL ++RDL N LV + + + DF
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 364 LSLRCAVSPTLIKASSLDAEPLRKNP 389
+S R S + P+R P
Sbjct: 179 MS-RDVYSTDYYRVGGHTMLPIRWMP 203
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 455 VGTH-----EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVV- 507
VG H ++ PE I + D W+FG+ L+E+ +GK P+ N + +
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 508 GQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYK 542
G+ L P V D++ G +EPQ RL K
Sbjct: 251 GRVLERPR--VCPKEVYDVMLGCWQREPQQRLNIK 283
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + KY
Sbjct: 58 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 111
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 112 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 170
Query: 376 KAS 378
KAS
Sbjct: 171 KAS 173
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + KY
Sbjct: 57 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 110
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 169
Query: 376 KAS 378
KAS
Sbjct: 170 KAS 172
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 226
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
LV E+ D KQ + + +RFY+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 116 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + KY
Sbjct: 83 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 136
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 195
Query: 376 KAS 378
KAS
Sbjct: 196 KAS 198
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 252
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVM---DKASLAGRKKLLRAQTEREILQS 272
S F+L LG G G V + T A+K + DK A LR E +IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 273 LDHPFLPTLYTHFETEKFS----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + T++ + F +++ DLH + Q + +++++ + L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
A++ LH +I+RDLKP N+L+ + + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 37/145 (25%)
Query: 444 AEPTEARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 500
+EPT +S V T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 501 ATL---FNVVGQP-----LR----------------FPESPVVSFAAR------DLIRGL 530
L F ++G P LR +P +P+ R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 531 LVKEPQHRLAYKRGATEIKQHPFFE 555
LV +P R+ A E +HP+ +
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVM---DKASLAGRKKLLRAQTEREILQS 272
S F+L LG G G V + T A+K + DK A LR E +IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 273 LDHPFLPTLYTHFETEKFS----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + T++ + F +++ DLH + Q + +++++ + L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
A++ LH +I+RDLKP N+L+ + + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 37/145 (25%)
Query: 444 AEPTEARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 500
+EPT +S + FV T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 501 ATL---FNVVGQP-----LR----------------FPESPVVSFAAR------DLIRGL 530
L F ++G P LR +P +P+ R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 531 LVKEPQHRLAYKRGATEIKQHPFFE 555
LV +P R+ A E +HP+ +
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTL 281
+R+G G G+VY + G A+K+++ + ++L + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 282 YTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIY 341
+ + T +V ++C G L+ K+ + + + ++YLH II+
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQTAQGMDYLHAKSIIH 127
Query: 342 RDLKPENVLVREDGHIMLSDFDLS 365
RDLK N+ + ED + + DF L+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 456 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 513 FPE 515
P+
Sbjct: 228 SPD 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 266 EREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
E I+ DHP + L K +V E+ G L T +K G++ Q V +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM-LR 131
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ ++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVM---DKASLAGRKKLLRAQTEREILQS 272
S F+L LG G G V + T A+K + DK A LR E +IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 273 LDHPFLPTLYTHFETEKFS----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + T++ + F +++ DLH + Q + +++++ + L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
A++ LH +I+RDLKP N+L+ + + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 37/145 (25%)
Query: 444 AEPTEARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 500
+EPT +S +V T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 501 ATL---FNVVGQP-----LR----------------FPESPVVSFAAR------DLIRGL 530
L F ++G P LR +P +P+ R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 531 LVKEPQHRLAYKRGATEIKQHPFFE 555
LV +P R+ A E +HP+ +
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + A+K + + + RA E
Sbjct: 53 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 111
Query: 267 REILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + +L F +K LVME ++ + + +
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERM 166
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 343 DPAKRIS----VDDALQHPYI 359
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY+ A+K + + ++ + L A +EI HP L L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 94
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E +V E+ P G+L ++ + + + ++ A+EYL I+R
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 155 DLAARNCLVGENHVVKVADFGLS 177
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 68
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQ 126
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + KY
Sbjct: 52 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 105
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 106 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 164
Query: 376 KAS 378
KAS
Sbjct: 165 KAS 167
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L ++ LK +G G G V + + A+K + + + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVN 81
Query: 275 HPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + +L F +K LVME ++ + + + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQML 136
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + KY
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 108
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 167
Query: 376 KAS 378
KAS
Sbjct: 168 KAS 170
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + KY
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 108
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 167
Query: 376 KAS 378
KAS
Sbjct: 168 KAS 170
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME +L + Q + + +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L+ +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME +L + Q + + +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L+ +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 71
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 129
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI--LQSLDH 275
F+ ++ +G G G V+ ++ ++ K + R K + ERE+ L LDH
Sbjct: 13 FKEIELIGSGGFGQVFKAK---------HRIDGKTYVIKRVKYNNEKAEREVKALAKLDH 63
Query: 276 PFLPTL---YTHFETE-----------KFSCLV--MEFCPGGDLHTLRQKQPGKYFPEQA 319
+ + F+ + K CL MEFC G L +K+ G+ +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 320 VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
++ ++Y+H +I RDLKP N+ + + + + DF L
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
GT Y++PE I + +G VD + G+ L ELL T F+ S L + +
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI------- 235
Query: 515 ESPVVSFAARDLIRGLLVKEPQHR 538
S + + L++ LL K+P+ R
Sbjct: 236 ISDIFDKKEKTLLQKLLSKKPEDR 259
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 76
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 77 RLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEXTAREGAKFPIKWTAPE 188
Query: 397 CI 398
I
Sbjct: 189 AI 190
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L ++ LK +G G G V + + A+K + + + RA E +L+ ++
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKCVN 81
Query: 275 HPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + +L F +K LVME + + + + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQML 136
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 513
+V T Y APE+I G G+ + VD W+ G + EL+ G F+G+ + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT-DHIDQWNKVIEQLGT 243
Query: 514 PESPVVSFAARDLIRGLLVKEPQH 537
P + ++ A + +R + P++
Sbjct: 244 PSAEFMA-ALQPTVRNYVENRPKY 266
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 78
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 79 RLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEYTAREGAKFPIKWTAPE 190
Query: 397 CI 398
I
Sbjct: 191 AI 192
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 74
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 75 RLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEXTAREGAKFPIKWTAPE 186
Query: 397 CI 398
I
Sbjct: 187 AI 188
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 20/172 (11%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA 263
QAVR + S ++ K +G G+ G V C +KV K + K L+A
Sbjct: 17 QAVREFAKEIDASCIKIEKVIGVGEFGEV---------CSGRLKVPGKREICVAIKTLKA 67
Query: 264 Q----------TEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGK 313
+E I+ DHP + L K ++ E+ G L +K G+
Sbjct: 68 GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR 127
Query: 314 YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ Q V + + ++YL + ++RDL N+LV + +SDF +S
Sbjct: 128 FTVIQLVGM-LRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 254
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
S + LK LGCG G V+ + + A+K K L + + A E +I++ LDH
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIRRLDH 67
Query: 276 PFLPTLYTHFE-------------TEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
+ ++ TE S +++ DL + ++ P E+ R
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEEHARL 124
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLVR-EDGHIMLSDFDLS 365
++ ++L L+Y+H +++RDLKP N+ + ED + + DF L+
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 33/127 (25%)
Query: 457 THEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSG----------------- 498
T Y +P ++ + A+D W G E+L GKT F G+
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 499 -NRATLFNVVGQPLRF----PESPV------VSFAARDLIRGLLVKEPQHRLAYKRGATE 547
+R L +V+ +R P P+ +S A D + +L P RL A E
Sbjct: 247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT----AEE 302
Query: 548 IKQHPFF 554
HP+
Sbjct: 303 ALSHPYM 309
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 314 YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Y E ++ + +L+ ++Y+H GI++RDLKP N LV +D + + DF L+
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L ++ LK +G G G V + + A+K + + + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 275 HPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + +L F +K LVME ++ + + + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQML 136
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 20/172 (11%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA 263
QAVR + S ++ K +G G+ G V C +KV K + K L+A
Sbjct: 2 QAVREFAKEIDASCIKIEKVIGVGEFGEV---------CSGRLKVPGKREICVAIKTLKA 52
Query: 264 Q----------TEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGK 313
+E I+ DHP + L K ++ E+ G L +K G+
Sbjct: 53 GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR 112
Query: 314 YFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ Q V + + ++YL + ++RDL N+LV + +SDF +S
Sbjct: 113 FTVIQLVGM-LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 239
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 69
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVM-DKASLAGRKKLLRAQTE 266
+L + R +K LG G G+VY + + K A+KV+ + S K++L E
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEIL---DE 69
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ + P++ L T LV + P G L ++ G+ Q + + +
Sbjct: 70 AYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGR-LGSQDLLNWCMQ 127
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL + +++RDL NVLV+ H+ ++DF L+
Sbjct: 128 IAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFE----TEKFS--CLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F E+F LVME ++ +
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----L 123
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L ++ LK +G G G V + + A+K + + + RA E +L+ ++
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKCVN 79
Query: 275 HPFLPTLYTHFE----TEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + +L F E+F LVME + + + + + + ++L
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQML 134
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + EL+ G F+G+ + V+ Q
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 238
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L ++ LK +G G G V + + A+K + + + RA E +++ ++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 119
Query: 275 HPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + +L F +K LVME ++ + + + + + ++L
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 174
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 343 DPAKRIS----VDDALQHPYI 359
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVM--DKASLAGRK---KLLR----AQTE 266
+ + L+++LG G +V+L++ + AMK++ DK + KLL+ A
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 267 RE-------ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQA 319
+E IL+ LDH + H +++ G +L L +K + P
Sbjct: 79 KEDSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 320 VRFYVAEVLLALEYLHM-LGIIYRDLKPENVLV 351
V+ ++LL L+Y+H GII+ D+KPENVL+
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF---------KGSGNRATLFN 505
+ T EY +PE++ G G D W+ ++EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 506 VVGQ----PLRFPESPVVSFAARDLIRGL 530
++G+ LR + F +R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
L ++ LK +G G G V + + A+K + + + RA E +++ ++
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 74
Query: 275 HPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
H + +L F +K LVME ++ + + + + + ++L
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQML 129
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 172
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 298 DPAKRIS----VDDALQHPYI 314
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 77
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 78 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEXTAREGAKFPIKWTAPE 189
Query: 397 CI 398
I
Sbjct: 190 AI 191
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 73
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 74 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEYTAREGAKFPIKWTAPE 185
Query: 397 CI 398
I
Sbjct: 186 AI 187
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEXTAREGAKFPIKWTAPE 180
Query: 397 CI 398
I
Sbjct: 181 AI 182
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 289 KFSCLV--MEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKP 346
K CL MEFC G L +K+ G+ + ++ ++Y+H +I+RDLKP
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 347 ENVLVREDGHIMLSDFDL 364
N+ + + + + DF L
Sbjct: 165 SNIFLVDTKQVKIGDFGL 182
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 456 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
GT Y++PE I + +G VD + G+ L ELL T F+ S L + +
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGII------ 250
Query: 515 ESPVVSFAARDLIRGLLVKEPQHR 538
S + + L++ LL K+P+ R
Sbjct: 251 -SDIFDKKEKTLLQKLLSKKPEDR 273
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 74
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 75 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEYTAREGAKFPIKWTAPE 186
Query: 397 CI 398
I
Sbjct: 187 AI 188
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 68
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 126
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVM--DKASLAGRK---KLLR----AQTE 266
+ + L+++LG G +V+L++ + AMK++ DK + KLL+ A
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 267 RE-------ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQA 319
+E IL+ LDH + H +++ G +L L +K + P
Sbjct: 79 KEDSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 320 VRFYVAEVLLALEYLHM-LGIIYRDLKPENVLV 351
V+ ++LL L+Y+H GII+ D+KPENVL+
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF---------KGSGNRATLFN 505
+ T EY +PE++ G G D W+ ++EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 506 VVGQ----PLRFPESPVVSFAARDLIRGL 530
++G+ LR + F +R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 67
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 70
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 71 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEXTAREGAKFPIKWTAPE 182
Query: 397 CI 398
I
Sbjct: 183 AI 184
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFE----TEKFS--CLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F E+F LVME ++ +
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 123
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 123
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 70
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 17 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 75
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 76 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 130
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+ S ++
Sbjct: 131 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMV 185
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
FV T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 242
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDAEXTAREGAKFPIKWTAPE 180
Query: 397 CI 398
I
Sbjct: 181 AI 182
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 70 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 124
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 306 DPAKRIS----VDDALQHPYI 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 70 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 124
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 306 DPAKRIS----VDDALQHPYI 322
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRK--KLLRAQTEREILQSLDHPFLP 279
+++G G G+V+ +E G+ A+K++ + + + LR E I++ L HP +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDV--AVKILMEQDFHAERVNEFLR---EVAIMKRLRHPNIV 97
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVA-EVLLALEYLHMLG 338
+V E+ G L+ L K + ++ R +A +V + YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 339 --IIYRDLKPENVLVREDGHIMLSDFDLS 365
I++R+LK N+LV + + + DF LS
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 451 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVG-- 508
S S GT E++APE+++ E D ++FG+ L+EL + P+ G+ N A + VG
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFK 254
Query: 509 -QPLRFPESPVVSFAARDLIRGLLVKEPQHRLAY 541
+ L P + AA +I G EP R ++
Sbjct: 255 CKRLEIPRNLNPQVAA--IIEGCWTNEPWKRPSF 286
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 68 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 122
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 123 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 303
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 304 DPAKRIS----VDDALQHPYI 320
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEYTAREGAKFPIKWTAPE 180
Query: 397 CI 398
I
Sbjct: 181 AI 182
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 69
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 70 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEXTAREGAKFPIKWTAPE 181
Query: 397 CI 398
I
Sbjct: 182 AI 183
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 123
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 217 HFRLLKR-LGCGDIGSVYLSELSGT-----KCYFAMKVMDKASLAGRKKLLRAQTEREIL 270
H +LKR LG G G V+L+E K A+K + AS RK R E E+L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAELL 69
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQPGKYFPE---------QAV 320
+L H + Y +V E+ GDL+ LR P Q+
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 321 RFYVAEVLLA-LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASS 379
++A+ + A + YL ++RDL N LV E+ + + DF +S R S +
Sbjct: 130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS-RDVYSTDYYRVGG 188
Query: 380 LDAEPLRKNP 389
P+R P
Sbjct: 189 HTMLPIRWMP 198
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 117
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 299 DPAKRIS----VDDALQHPYI 315
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEXTAREGAKFPIKWTAPE 180
Query: 397 CI 398
I
Sbjct: 181 AI 182
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 117
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 299 DPAKRIS----VDDALQHPYI 315
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L K+LG G G V+++ + TK A+K M S++ L E ++++L H
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKV--AVKTMKPGSMSVEAFL----AEANVMKTLQHD 70
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L L+ E ++ EF G L + G P + + A++ + ++
Sbjct: 71 KLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLS 365
I+RDL+ N+LV ++DF L+
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGN 499
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL--LRAQTEREILQS 272
+S + L ++G G G V+ + T A+K K + K+ + A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQL 73
Query: 273 LDHPFLPTLYTHFETEKF---SC-----LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYV 324
L H + L T+ C LV +FC DL L K+ + R V
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--V 130
Query: 325 AEVLL-ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++LL L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA----QTEREILQSLDHPF 277
K++G G G V+ L K A+K + G +++ Q E I+ +L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLH--TLRQKQPGKYFPEQAVRF-YVAEVLLALEYL 334
+ LY +VMEF P GDL+ L + P K+ +V+ + ++ L +EY+
Sbjct: 85 IVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW----SVKLRLMLDIALGIEYM 138
Query: 335 HMLG--IIYRDLKPENVLVR 352
I++RDL+ N+ ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 454 FVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 494
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 63
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 64 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+RDL+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLA-------RLIEDNEYTAREGAKFPIKWTAPE 175
Query: 397 CI 398
I
Sbjct: 176 AI 177
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFETEKF------SCLVMEFCPGGDLHTLRQKQPGKYF 315
RA E +++ ++H + +L F +K LVME ++ +
Sbjct: 62 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 116
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + + + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ---- 509
+V T Y APE+I G G+ VD W+ G + E++ K F G V+ Q
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 510 ---------------------------PLRFPES---------PVVSFAARDLIRGLLVK 533
P FP+S + + ARDL+ +LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 534 EPQHRLAYKRGATEIKQHPFF 554
+P R++ + QHP+
Sbjct: 298 DPAKRIS----VDDALQHPYI 314
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 13/181 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
+L K+LG G G V+++ + A+K M S++ L E ++++L H
Sbjct: 190 LKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFL----AEANVMKTLQHDK 244
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
L L+ E ++ EF G L + G P + + A++ + ++
Sbjct: 245 LVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 338 GIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPAC 397
I+RDL+ N+LV ++DF L+ +I+ + A K P+ P
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLA-------RVIEDNEYTAREGAKFPIKWTAPEA 356
Query: 398 I 398
I
Sbjct: 357 I 357
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGN 499
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 27/171 (15%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L L + +LL+ +G G G+VY L A+KV S A R+ + E+ I +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPV--AVKVF---SFANRQNFI---NEKNIYRV 61
Query: 273 --LDHPFLPTLYTHFETEKFS-----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
++H + E LVME+ P G L + + V
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVT 121
Query: 326 EVLLALEYLHML---------GIIYRDLKPENVLVREDGHIMLSDFDLSLR 367
L YLH I +RDL NVLV+ DG ++SDF LS+R
Sbjct: 122 R---GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA----QTEREILQSLDHPF 277
K++G G G V+ L K A+K + G +++ Q E I+ +L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLH--TLRQKQPGKYFPEQAVRF-YVAEVLLALEYL 334
+ LY +VMEF P GDL+ L + P K+ +V+ + ++ L +EY+
Sbjct: 85 IVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW----SVKLRLMLDIALGIEYM 138
Query: 335 HMLG--IIYRDLKPENVLVR 352
I++RDL+ N+ ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 454 FVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 494
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA----QTEREILQSLDHPF 277
K++G G G V+ L K A+K + G +++ Q E I+ +L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLH--TLRQKQPGKYFPEQAVRF-YVAEVLLALEYL 334
+ LY +VMEF P GDL+ L + P K+ +V+ + ++ L +EY+
Sbjct: 85 IVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW----SVKLRLMLDIALGIEYM 138
Query: 335 HMLG--IIYRDLKPENVLVR 352
I++RDL+ N+ ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 454 FVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 494
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L K+LG G G V+++ + TK A+K M S++ L E ++++L H
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKV--AVKTMKPGSMSVEAFL----AEANVMKTLQHD 237
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L L+ E ++ EF G L + G P + + A++ + ++
Sbjct: 238 KLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSP 372
I+RDL+ N+LV ++DF L+ A P
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP 332
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGN 499
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + K+
Sbjct: 435 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KFSL 488
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYY 547
Query: 376 KAS 378
KAS
Sbjct: 548 KAS 550
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKL 260
+AVR + +S ++ + +G G+ G V L + + A+K + +++
Sbjct: 21 EAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD 80
Query: 261 LRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+E I+ DHP + L ++ EF G L + ++ G++ Q V
Sbjct: 81 FL--SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 138
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++YL + ++RDL N+LV + +SDF LS
Sbjct: 139 GM-LRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFPESPV 518
+ APE I+ SA D W++GI ++E++ +G+ P+ N+ + N + Q R P
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLPPPMD 264
Query: 519 VSFAARDLIRGLLVKEPQHR 538
A L+ K+ HR
Sbjct: 265 CPSALHQLMLDCWQKDRNHR 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 218 FRLLKRLGCG--DIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
+ LL +G G D+ +V L+ T Y ++ ++ + + + + Q E + + +H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNH 69
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + F + +V F G L E A+ + + VL AL+Y+H
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 336 MLGIIYRDLKPENVLVREDGHIMLS 360
+G ++R +K ++L+ DG + LS
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLS 154
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + K+
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KFSL 108
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + + L DF LS R T
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTXX 167
Query: 376 KAS 378
KAS
Sbjct: 168 KAS 170
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSV----YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQ 271
+ R LK LG G G+V ++ E K +KV++ S GR+ +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIG 88
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
SLDH + L LV ++ P G L ++ G P+ + + V ++ +
Sbjct: 89 SLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV-QIAKGM 146
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
YL G+++R+L NVL++ + ++DF ++
Sbjct: 147 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLD 274
+ F++ + G G G+V L + T A+K + + ++L Q L L
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD----LAVLH 77
Query: 275 HPFLPTLYTHFET-------EKFSCLVMEFCPGGDLHTL------RQKQPGKYFPEQAVR 321
HP + L ++F T + + +VME+ P LH RQ P P ++
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAP----PPILIK 132
Query: 322 FYVAEVLLALEYLHM--LGIIYRDLKPENVLVRE-DGHIMLSDF 362
++ +++ ++ LH+ + + +RD+KP NVLV E DG + L DF
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 424 KDRKPKNEIGNQVSPLPELI-------AEPTEARSMSFVGTHEYLAPEIIKGEGH-GSAV 475
+D KP N + N+ +L P+E +++++ + Y APE+I G H +AV
Sbjct: 155 RDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAV 213
Query: 476 DWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
D W+ G E++ G+ F+G + L +V
Sbjct: 214 DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL--LRAQTEREILQS 272
+S + L ++G G G V+ + T A+K K + K+ + A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQL 73
Query: 273 LDHPFLPTLYTHFETE-------KFSC-LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYV 324
L H + L T+ K S LV +FC DL L K+ + R V
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--V 130
Query: 325 AEVLL-ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++LL L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 77/180 (42%), Gaps = 25/180 (13%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA 263
+ V+ +D + +R+++ L G + L E ++A+K +K+ L ++ ++
Sbjct: 21 KYVKEKDKYIN--DYRIIRTLNQGKFNKIILCEKDNK--FYALKKYEKSLLEKKRDFTKS 76
Query: 264 QTEREILQSLDHPFLPTLYTHFETEKFSCL--------------VMEFCPGGDLHTLRQ- 308
++ ++S F L + + CL + E+ + +
Sbjct: 77 NNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY 136
Query: 309 -----KQPGKYFPEQAVRFYVAEVLLALEYLHM-LGIIYRDLKPENVLVREDGHIMLSDF 362
K + P Q ++ + VL + Y+H I +RD+KP N+L+ ++G + LSDF
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 456 GTHEYLAPEIIKGEG--HGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 507
GT+E++ PE E +G+ VD W+ GI LY + + PF + LFN +
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 87
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 146
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 258
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 218 FRLLKRLGCG--DIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDH 275
+ LL +G G D+ +V L+ T Y ++ ++ + + + + Q E + + +H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNH 85
Query: 276 PFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLH 335
P + F + +V F G L E A+ + + VL AL+Y+H
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 336 MLGIIYRDLKPENVLVREDGHIMLS 360
+G ++R +K ++L+ DG + LS
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLS 170
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 70
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 129
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 241
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL--LRAQTEREILQS 272
+S + L ++G G G V+ + T A+K K + K+ + A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQL 73
Query: 273 LDHPFLPTLYTHFETEKF---SC-----LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYV 324
L H + L T+ C LV +FC DL L K+ + R V
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--V 130
Query: 325 AEVLL-ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++LL L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E +++EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 69
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
+ + YL +++RDL NVLV+ H+ ++DF
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 69
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
+ + YL +++RDL NVLV+ H+ ++DF
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E +++EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 71
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 129
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
+ + YL +++RDL NVLV+ H+ ++DF
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 16 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 74
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 75 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 129
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 76
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E +++EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS 159
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 215 LSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL--LRAQTEREILQS 272
+S + L ++G G G V+ + T A+K K + K+ + A E +ILQ
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQL 72
Query: 273 LDHPFLPTLYTHFETEKF---SC-----LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYV 324
L H + L T+ C LV +FC DL L K+ + R V
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--V 129
Query: 325 AEVLL-ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++LL L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 130 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 97
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 156
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 268
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSV----YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQ 271
+ R LK LG G G+V ++ E K +KV++ S GR+ +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIG 70
Query: 272 SLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
SLDH + L LV ++ P G L ++ G P+ + + V ++ +
Sbjct: 71 SLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV-QIAKGM 128
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
YL G+++R+L NVL++ + ++DF ++
Sbjct: 129 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 496
V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E +++EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 20 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 78
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 79 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 133
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 134 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 496
+V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E +++EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 107 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 67
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 106 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 455 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 496
V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 106 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERM 128
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 371
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+ S
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 509
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY--LSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
+L + F+ +K LG G G+VY L G K + +M+ K E +
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ S+D+P + L T L+ + P G L ++ Q + + ++
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAK 162
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 126 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 213 LGLSHFRLLKR------LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTE 266
+G S F +LKR +G G G V + + + A+K + + + RA E
Sbjct: 9 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRE 67
Query: 267 REILQSLDHPFLPTLYTHF----ETEKFS--CLVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
+++ ++H + L F E+F +VME ++ + + +
Sbjct: 68 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERM 122
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + ++L +++LH GII+RDLKP N++V+ D + + DF L+
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 454 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 496
+V T Y APE+I G G+ VD W+ G + E++ K F G
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSG------TKCYFAMKVMDKASLAGR 257
Q +A+ + LS R ++ LG G VY L G T+ + DKA R
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQP----G 312
++ R LQ HP + L ++ ++ +C GDLH L + P G
Sbjct: 74 EEFRHEAMLRARLQ---HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 313 KYFPEQAVR---------FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 363
++ V+ VA++ +EYL ++++DL NVLV + ++ +SD
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 364 L 364
L
Sbjct: 191 L 191
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + K+
Sbjct: 435 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KFSL 488
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + L DF LS R T
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYY 547
Query: 376 KAS 378
KAS
Sbjct: 548 KAS 550
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSG-TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
+L++RLG G G V++ +G TK A+K + + S++ L E +++ L H
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 64
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHM 336
L LY E ++ E+ G L + G + A++ + ++
Sbjct: 65 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 337 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPA 396
I+R+L+ N+LV + ++DF L+ LI+ + A K P+ P
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLA-------RLIEDNEYTAREGAKFPIKWTAPE 176
Query: 397 CI 398
I
Sbjct: 177 AI 178
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
L+ E+ D L + +R+Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELSG------TKCYFAMKVMDKASLAGRKKLLRAQTE 266
+ LS R ++ LG G VY L G T+ + DKA R++
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 65
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQP----GKYFPEQAVR 321
R LQ HP + L ++ ++ +C GDLH L + P G ++ V+
Sbjct: 66 RARLQ---HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 322 ---------FYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
VA++ +EYL ++++DL NVLV + ++ +SD L
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 257 RKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFP 316
R+K L+ E ++ DHP + L TE ++ME C G+L + Q + K+
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KFSL 108
Query: 317 EQA-VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLI 375
+ A + Y ++ AL YL ++RD+ NVLV + L DF LS R T
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYY 167
Query: 376 KAS 378
KAS
Sbjct: 168 KAS 170
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSGNRATLFNVVGQ 509
+++APE I SA D W FG+ ++E+L G PF+G N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 69
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 11/176 (6%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 343 DLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNPVYCVQPACI 398
DL N LV E+ + ++DF LS L+ + A K P+ P +
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS-------RLMTGDTFTAHAGAKFPIKWTAPESL 182
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 77
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 135
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 439 LPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGS 497
L E ++PTE S+ + APE I SA D W++GI ++E++ FG+ P+
Sbjct: 168 LEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
Query: 498 GNRATLFNVVGQPLRFPESP 517
N+ + N + Q R P P
Sbjct: 228 SNQDVI-NAIEQDYRLPPPP 246
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 8/166 (4%)
Query: 204 QAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELS--GTK--CYFAMKVMDKASLAGRKK 259
+AVR + +S+ ++ + +G G+ G V L G K C + + R++
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 260 LLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQA 319
L +E I+ +HP + L ++ EF G L + + G++ Q
Sbjct: 64 FL---SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL 120
Query: 320 VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
V + + + YL + ++RDL N+LV + +SDF LS
Sbjct: 121 VGM-LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 282
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
+L N LV E+ + ++DF LS
Sbjct: 343 NLAARNCLVGENHLVKVADFGLS 365
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 221
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 222 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEF-CPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 121
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 70
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 76
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS 159
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K L G G+VY + E K A+K + +A S K++L E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 74
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+M+ P G L ++ Q + + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 70
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 6/146 (4%)
Query: 220 LLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLP 279
LLK LG G G V L + G + A+K++ + S++ + AQT + L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
Y E +V E+ G L + P Q + +V + +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM-CYDVCEGMAFLESHQF 125
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLS 365
I+RDL N LV D + +SDF ++
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMT 151
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 452 MSFVGTH---EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV 506
+S VGT ++ APE+ + S D W FGI ++E+ GK P+ N + V
Sbjct: 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 73
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 131
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 74
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF L+
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 67
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 70
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 67
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGG-DLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+++D PF T Y E + E D + G+ PE + ++
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 147
Query: 330 ALEYLH-MLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
ALE+LH L +I+RD+KP NVL+ G + DF +S
Sbjct: 148 ALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 92
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 150
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 151 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 10/156 (6%)
Query: 217 HFRLLKR---LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA--QTEREILQ 271
H R LK+ LG G G V L T V KA G LR+ Q E EIL+
Sbjct: 7 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILR 66
Query: 272 SLDHPFLPTLYTHFET--EKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+L H + E EK LVME+ P G +LR P + + ++
Sbjct: 67 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICE 123
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ YLH I+R L NVL+ D + + DF L+
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 488
+ APE +K A D W+FG+ LYELL
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 79
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 140 DLAARNCLVGENHLVKVADFGLS 162
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQ----------T 265
S ++ K +G G+ G V C +KV K + K L+A +
Sbjct: 8 SCIKIEKVIGVGEFGEV---------CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS 58
Query: 266 EREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVA 325
E I+ DHP + L K ++ E+ G L +K G++ Q V +
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM-LR 117
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ ++YL + ++RDL N+LV + +SDF +S
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 233
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 10/156 (6%)
Query: 217 HFRLLKR---LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRA--QTEREILQ 271
H R LK+ LG G G V L T V KA G LR+ Q E EIL+
Sbjct: 6 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILR 65
Query: 272 SLDHPFLPTLYTHFET--EKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+L H + E EK LVME+ P G +LR P + + ++
Sbjct: 66 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICE 122
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ YLH I+R L NVL+ D + + DF L+
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 488
+ APE +K A D W+FG+ LYELL
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 321
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
+L N LV E+ + ++DF LS
Sbjct: 382 NLAARNCLVGENHLVKVADFGLS 404
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 70
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E G L + +K ++ Q V + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 129
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 241
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 138 DLAARNCLVGENHLVKVADFGLS 160
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E+ G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 364
++YL +G ++RDL N+L+ + +SDF L
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 279
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
+L N LV E+ + ++DF LS
Sbjct: 340 NLAARNCLVGENHLVKVADFGLS 362
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 300 GGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 359
G DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + +
Sbjct: 129 GADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 360 SDFDLS 365
DF L+
Sbjct: 186 CDFGLA 191
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 287
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 88
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 149 DLAARNCLVGENHLVKVADFGLS 171
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 262 RAQTEREILQSLDHPFLPTLYTHFET----EKFSCLVMEFCPGGDLHTLRQKQPGKYFPE 317
R + E E L+ L HP + Y +E+ +K LV E G L T ++ K
Sbjct: 71 RFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR--FKVXKI 128
Query: 318 QAVRFYVAEVLLALEYLHMLG--IIYRDLKPENVLVRE-DGHIMLSDFDLS 365
+ +R + ++L L++LH II+RDLK +N+ + G + + D L+
Sbjct: 129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 223 RLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLY 282
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 283 THFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
E ++ EF G+L ++ + + + ++ A+EYL I+R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 343 DLKPENVLVREDGHIMLSDFDLS 365
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 61
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 119
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 64
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 122
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSL---- 273
+ ++++LG G +V+LS K + AMKV+ A L + + + S
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98
Query: 274 DHPFLPTLYTHFETEKFS----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ + L F+ + C+V E G L K + P V+ + +VL
Sbjct: 99 NREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 157
Query: 330 ALEYLHM-LGIIYRDLKPENVLV 351
L+YLH II+ D+KPEN+L+
Sbjct: 158 GLDYLHTKCRIIHTDIKPENILL 180
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSL---- 273
+ +LK +G G G V + + A+K++ R+ A E IL+ L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQD 154
Query: 274 -DHPF-LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
D+ + + +F C+ E +L+ L +K + F VR + +L L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
+ LH II+ DLKPEN+L+++ G + D C
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK--TPFKGSGNR-ATLFNV 506
R + + + Y APE+I G +G +D W+ G L ELL G P + G++ A + +
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 507 VGQP 510
+G P
Sbjct: 315 LGMP 318
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
L ++ + K +G G+ G V L S + A+K + +++ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 270 LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ DHP + L K +V E G L + +K ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 330 ALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL +G ++RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKA-----SLAGRKKLLRAQTEREILQS 272
+ ++++LG G +V+L K + AMKV+ A + KLL+ E +
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDP-SD 91
Query: 273 LDHPFLPTLYTHFETEKFS----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
+ + L F+ + C+V E G L K + P + V+ + +VL
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFEVL-GHHLLKWIIKSNYQGLPVRCVKSIIRQVL 150
Query: 329 LALEYLH-MLGIIYRDLKPENVLVRED 354
L+YLH II+ D+KPEN+L+ D
Sbjct: 151 QGLDYLHSKCKIIHTDIKPENILMCVD 177
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSL---- 273
+ ++++LG G +V+LS K + AMKV+ A L + + + S
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 274 DHPFLPTLYTHFETEKFS----CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ + L F+ + C+V E G L K + P V+ + +VL
Sbjct: 83 NREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 141
Query: 330 ALEYLHM-LGIIYRDLKPENVLV 351
L+YLH II+ D+KPEN+L+
Sbjct: 142 GLDYLHTKCRIIHTDIKPENILL 164
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 263 AQTEREILQSLDHPFLPTLYTHFETEK---FSCLVMEFCPGGDLHTLRQKQPGKYFPEQA 319
A E ++L+ D P + +F TEK F + +E C TL++ K F
Sbjct: 64 ADREVQLLRESDEH--PNVIRYFCTEKDRQFQYIAIELCAA----TLQEYVEQKDFAHLG 117
Query: 320 VR--FYVAEVLLALEYLHMLGIIYRDLKPENVLV---REDGHI--MLSDFDLSLRCAVSP 372
+ + + L +LH L I++RDLKP N+L+ G I M+SDF L + AV
Sbjct: 118 LEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 373 TLIK------------ASSLDAEPLRKNPVYCV 393
A + +E ++NP Y V
Sbjct: 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTV 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 30/201 (14%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCY-----FAMKVMDKASLAGRKKLLRAQTEREIL 270
++ ++ +G G G V+ + G Y A+K++ + + A + Q E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF--QREAALM 104
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL---------HTL------------RQK 309
D+P + L K CL+ E+ GDL HT+ R
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 310 QPGKYFPEQAVRFYVA-EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
PG A + +A +V + YL ++RDL N LV E+ + ++DF LS R
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS-RN 223
Query: 369 AVSPTLIKASSLDAEPLRKNP 389
S KA DA P+R P
Sbjct: 224 IYSADYYKADGNDAIPIRWMP 244
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSL---- 273
+ +LK +G G G V + + A+K++ R+ A E IL+ L
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQD 154
Query: 274 -DHPF-LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
D+ + + +F C+ E +L+ L +K + F VR + +L L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
+ LH II+ DLKPEN+L+++ G + D C
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK--TPFKGSGNR-ATLFNVVGQP 510
Y APE+I G +G +D W+ G L ELL G P + G++ A + ++G P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMP 318
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSL---- 273
+ +LK +G G G V + + A+K++ R+ A E IL+ L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQD 154
Query: 274 -DHPF-LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLAL 331
D+ + + +F C+ E +L+ L +K + F VR + +L L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 332 EYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC 368
+ LH II+ DLKPEN+L+++ G + D C
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 450 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK--TPFKGSGNR-ATLFNV 506
R + + + Y APE+I G +G +D W+ G L ELL G P + G++ A + +
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 507 VGQP 510
+G P
Sbjct: 315 LGMP 318
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQ---------KQPGKYFPEQA 319
+ +S DHP + Y T++F + +E C +L L + K +Y P
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 320 VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 364
+R ++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 139 LR----QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 69
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
+ + YL +++RDL NVLV+ H+ ++DF
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 220 LLKRLGCGDIGSVYLS---ELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
L K LG G+ G V + L G Y + V A +L +E +L+ ++HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTL----RQKQPG-------------KYFPEQA 319
+ LY + L++E+ G L R+ PG + E+A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 320 VRF-----YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTL 374
+ + ++ ++YL + +++RDL N+LV E + +SDF LS +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 375 IKAS 378
+K S
Sbjct: 207 VKRS 210
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 67
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
+ + YL +++RDL NVLV+ H+ ++DF
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K LG G G+VY + E K A+K + +A S K++L E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 74
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDF 362
+ + YL +++RDL NVLV+ H+ ++DF
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQ---------KQPGKYFPEQA 319
+ +S DHP + Y T++F + +E C +L L + K +Y P
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 320 VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 364
+R ++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 139 LR----QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 269 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 317 EQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
E+ R + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQ---------KQPGKYFPEQA 319
+ +S DHP + Y T++F + +E C +L L + K +Y P
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 320 VRFYVAEVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 364
+R ++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 121 LR----QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 240
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 241 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 140
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 69/165 (41%), Gaps = 28/165 (16%)
Query: 217 HFRLLKR---LGCGDIGSV----YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
H R LK+ LG G G V Y GT A+K + KA AG + + E +I
Sbjct: 29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KAD-AGPQHRSGWKQEIDI 86
Query: 270 LQSLDHPFLPTLYTHFETEKFSC---------LVMEFCPGGDLHTLRQKQPGKYFPEQAV 320
L++L H H K C LVME+ P G +LR P +
Sbjct: 87 LRTLYH-------EHIIKYKGCCEDAGAASLQLVMEYVPLG---SLRDYLPRHSIGLAQL 136
Query: 321 RFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ ++ + YLH I+RDL NVL+ D + + DF L+
Sbjct: 137 LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 488
+ APE +K A D W+FG+ LYELL
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 269 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 168
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 3/167 (1%)
Query: 222 KRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQ--TEREILQSLDHPFLP 279
K +G G+ G VY L + + V K AG + R E I+ H +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 280 TLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGI 339
L K ++ E+ G L +++ G++ Q V + + ++YL +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM-LRGIAAGMKYLANMNY 168
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLR 386
++RDL N+LV + +SDF LS P +S P+R
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFP 514
+ APE I SA D W+FGI ++E++ +G+ P+ N + + R P
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-KAINDGFRLP 270
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 274
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 275 FRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 313
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 173
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 242 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 141
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 223 RLGCGDIGSVYLSELSGTKCY--FAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPT 280
++G G G VY ++ K +A+K ++ ++ + A E +L+ L HP + +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVIS 82
Query: 281 LYTHF--ETEKFSCLVMEFCPGGDLHTLRQKQPGK------YFPEQAVRFYVAEVLLALE 332
L F ++ L+ ++ H ++ + K P V+ + ++L +
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 333 YLHMLGIIYRDLKPENVLVREDG 355
YLH +++RDLKP N+LV +G
Sbjct: 143 YLHANWVLHRDLKPANILVMGEG 165
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 220 LLKRLGCGDIGSVYLS---ELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
L K LG G+ G V + L G Y + V A +L +E +L+ ++HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTL----RQKQPG-------------KYFPEQA 319
+ LY + L++E+ G L R+ PG + E+A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 320 VRF-----YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTL 374
+ + ++ ++YL + +++RDL N+LV E + +SDF LS +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 375 IKAS 378
+K S
Sbjct: 207 VKRS 210
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 27/116 (23%)
Query: 271 QSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQ---------KQPGKYFPEQAVR 321
+S DHP + Y T++F + +E C +L L + K +Y P +R
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 322 FYVAEVLLALEYLHMLGIIYRDLKPENVLVR-------------EDGHIMLSDFDL 364
++ + +LH L II+RDLKP+N+LV E+ I++SDF L
Sbjct: 123 ----QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 242 FFRQR--VSXECQHLIRWCLALRPXDRPTFE----EIQNHPWMQDV 281
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 141
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 254
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 220 LLKRLGCGDIGSVYLS---ELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHP 276
L K LG G+ G V + L G Y + V A +L +E +L+ ++HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 277 FLPTLYTHFETEKFSCLVMEFCPGGDLHTL----RQKQPG-------------KYFPEQA 319
+ LY + L++E+ G L R+ PG + E+A
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 320 VRF-----YVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTL 374
+ + ++ ++YL + +++RDL N+LV E + +SDF LS +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 375 IKAS 378
+K S
Sbjct: 207 VKRS 210
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 273 LDHPF--LPTLYTHFETEKFSCLVME-FCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSFFWQVLE 125
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 225
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 226 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 240
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 241 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 140
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 242 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 141
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 270 FRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 168
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 260
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 261 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 160
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K L G G+VY + E K A+K + +A S K++L E
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 67
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 227 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 126
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL--SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
VL + + +G G+ G V + + G + A+K M + A + E E+
Sbjct: 11 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEV 68
Query: 270 LQSL-DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQ--------------PGKY 314
L L HP + L E + L +E+ P G+L +K
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 315 FPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Q + + A+V ++YL I+RDL N+LV E+ ++DF LS
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 227 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 126
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVY----LSELSGTKCYFAMKVMDKA-SLAGRKKLLRAQTE 266
+L + F+ +K L G G+VY + E K A+K + +A S K++L E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL---DE 74
Query: 267 REILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
++ S+D+P + L T L+ + P G L ++ Q + + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 327 VLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + YL +++RDL NVLV+ H+ ++DF L+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL--SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
VL + + +G G+ G V + + G + A+K M + A + E E+
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEV 78
Query: 270 LQSL-DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQ--------------PGKY 314
L L HP + L E + L +E+ P G+L +K
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 315 FPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Q + + A+V ++YL I+RDL N+LV E+ ++DF LS
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 225
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 226 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 125
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 34/220 (15%)
Query: 189 INKPHKANDLRWEAIQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGT-----KCY 243
I P +D + ++ RD VL LG G G V+L+E K
Sbjct: 24 IENPQYFSD---ACVHHIKRRDIVLKWE-------LGEGAFGKVFLAECHNLLPEQDKML 73
Query: 244 FAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDL 303
A+K + +AS + R+ Q E E+L L H + + + +V E+ GDL
Sbjct: 74 VAVKALKEASESARQDF---QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 304 HTLRQKQ--------------PGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENV 349
+ + PG Q + ++V + YL L ++RDL N
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV-ASQVAAGMVYLAGLHFVHRDLATRNC 189
Query: 350 LVREDGHIMLSDFDLSLRCAVSPTLIKASSLDAEPLRKNP 389
LV + + + DF +S R S + P+R P
Sbjct: 190 LVGQGLVVKIGDFGMS-RDIYSTDYYRVGGRTMLPIRWMP 228
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVV-GQPLRFPES- 516
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 285
Query: 517 PVVSFAARDLIRGLLVKEPQHRLAYK 542
P +A ++RG +EPQ R + K
Sbjct: 286 PPEVYA---IMRGCWQREPQQRHSIK 308
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 362 FDLS 365
F L+
Sbjct: 170 FGLA 173
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N S L +A+P + +V T Y APEI + +G+
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVG 508
++D W+ G L E+L + F G L +++G
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 248
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 249 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 288
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 148
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 222 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEF-CPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 121
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 439 LPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGS 497
L E ++PT S+ + APE I SA D W++GI ++E++ FG+ P+
Sbjct: 166 LEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
Query: 498 GNRATLFNVVGQPLRFPESP 517
N+ + N + Q R P P
Sbjct: 226 SNQDVI-NAIEQDYRLPPPP 244
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSELS--GTK--CYFAMKVMDKASLAGRKKLLRAQTERE 268
+ +S+ ++ + +G G+ G V L G K C + + R++ L +E
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL---SEAS 67
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
I+ +HP + L ++ EF G L + + G++ Q V + +
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM-LRGIA 126
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ YL + ++RDL N+LV + +SDF LS
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 454 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLR 512
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 513 FPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 228 FRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEFC-PGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 126
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 224
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 225 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 264
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEF-CPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 124
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSL 267
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 362 FDLS 365
F L+
Sbjct: 168 FGLA 171
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 453 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL 511
F GT Y PE I+ HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 512 RFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
F + VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 222 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 SHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKL---LRAQTEREILQS 272
S +++ LG G GSVY A+K ++K ++ +L R E +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 273 LDHPF--LPTLYTHFETEKFSCLVMEF-CPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLL 329
+ F + L FE L++E P DL ++ E+ R + +VL
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 121
Query: 330 ALEYLHMLGIIYRDLKPENVLVRED-GHIMLSDF 362
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 31/206 (15%)
Query: 203 IQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGT-----KCYFAMKVMDKASLAGR 257
+ ++ RD VL LG G G V+L+E K A+K + +AS + R
Sbjct: 6 VHHIKRRDIVLKWE-------LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR 58
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQ------- 310
+ Q E E+L L H + + + +V E+ GDL+ +
Sbjct: 59 QDF---QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 115
Query: 311 -------PGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 363
PG Q + ++V + YL L ++RDL N LV + + + DF
Sbjct: 116 AGGEDVAPGPLGLGQLLAV-ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG 174
Query: 364 LSLRCAVSPTLIKASSLDAEPLRKNP 389
+S R S + P+R P
Sbjct: 175 MS-RDIYSTDYYRVGGRTMLPIRWMP 199
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVV-GQPLRFPES- 516
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 256
Query: 517 PVVSFAARDLIRGLLVKEPQHRLAYK 542
P +A ++RG +EPQ R + K
Sbjct: 257 PPEVYA---IMRGCWQREPQQRHSIK 279
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSL 267
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 362 FDLS 365
F L+
Sbjct: 168 FGLA 171
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 271
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKCQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 362 FDLS 365
F L+
Sbjct: 172 FGLA 175
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 31/206 (15%)
Query: 203 IQAVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGT-----KCYFAMKVMDKASLAGR 257
+ ++ RD VL LG G G V+L+E K A+K + +AS + R
Sbjct: 12 VHHIKRRDIVLKWE-------LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR 64
Query: 258 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQ------- 310
+ Q E E+L L H + + + +V E+ GDL+ +
Sbjct: 65 QDF---QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 121
Query: 311 -------PGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 363
PG Q + ++V + YL L ++RDL N LV + + + DF
Sbjct: 122 AGGEDVAPGPLGLGQLLAV-ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG 180
Query: 364 LSLRCAVSPTLIKASSLDAEPLRKNP 389
+S R S + P+R P
Sbjct: 181 MS-RDIYSTDYYRVGGRTMLPIRWMP 205
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVV-GQPLRFPES- 516
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 262
Query: 517 PVVSFAARDLIRGLLVKEPQHRLAYK 542
P +A ++RG +EPQ R + K
Sbjct: 263 PPEVYA---IMRGCWQREPQQRHSIK 285
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 267
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 362 FDLS 365
F L+
Sbjct: 168 FGLA 171
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 265
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 362 FDLS 365
F L+
Sbjct: 166 FGLA 169
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 269
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 362 FDLS 365
F L+
Sbjct: 170 FGLA 173
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 216 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 275
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 119 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 362 FDLS 365
F L+
Sbjct: 176 FGLA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 267
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 362 FDLS 365
F L+
Sbjct: 168 FGLA 171
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 267
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 362 FDLS 365
F L+
Sbjct: 168 FGLA 171
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 269
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 362 FDLS 365
F L+
Sbjct: 170 FGLA 173
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSL 265
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 362 FDLS 365
F L+
Sbjct: 166 FGLA 169
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 362 FDLS 365
F L+
Sbjct: 188 FGLA 191
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 287
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 362 FDLS 365
F L+
Sbjct: 172 FGLA 175
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 271
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 446 PTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFN 505
P A VGT Y++PE I G + VD ++ G+ L+ELL+ F R +
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERVRIIT 284
Query: 506 VVGQPLRFPESPVVSFAARD-LIRGLLVKEPQHRLAYKRGATEIKQHPFFEGV 557
V + L+FP + +++ +L P R AT+I ++ FE +
Sbjct: 285 DV-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPE----ATDIIENAIFENL 332
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 295 MEFCPGGDLHTLRQKQPGKYFPEQAVRFYV-AEVLLALEYLHMLGIIYRDLKPENVLVRE 353
M+ C +L ++ E V ++ ++ A+E+LH G+++RDLKP N+
Sbjct: 140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM 199
Query: 354 DGHIMLSDFDL 364
D + + DF L
Sbjct: 200 DDVVKVGDFGL 210
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 271
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 362 FDLS 365
F L+
Sbjct: 172 FGLA 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 272
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 362 FDLS 365
F L+
Sbjct: 173 FGLA 176
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKSQQ---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICD 187
Query: 362 FDLS 365
F L+
Sbjct: 188 FGLA 191
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L IA+P + V T Y APEI + +G+
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTK 227
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ ++ L
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSL 287
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 214 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 273
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 117 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 362 FDLS 365
F L+
Sbjct: 174 FGLA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 205 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 264
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 108 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 362 FDLS 365
F L+
Sbjct: 165 FGLA 168
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 271
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 362 FDLS 365
F L+
Sbjct: 172 FGLA 175
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 362 FDLS 365
F L+
Sbjct: 172 FGLA 175
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + V T Y APEI + +G+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 271
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 362 FDLS 365
F L+
Sbjct: 173 FGLA 176
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + V T Y APEI + +G+
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 272
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 302 DLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSD 361
DL+ L + Q + + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 362 FDLS 365
F L+
Sbjct: 172 FGLA 175
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 424 KDRKPKNEIGNQVSPLP------ELIAEPTEARS---MSFVGTHEYLAPEI-IKGEGHGS 473
+D KP N + N L +A+P + +V T Y APEI + +G+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 474 AVDWWTFGIFLYELLFGKTPFKGSGNRATL---FNVVGQPLRFPESPVVSFAARDLIRGL 530
++D W+ G L E+L + F G L ++G P + + +++ AR+ + L
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 213 LGLSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKA-SLAGRKKLLRAQTERE 268
+ +S ++ + +G G+ G V L + + A+K + + R+ L +E
Sbjct: 4 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFL---SEAS 60
Query: 269 ILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVL 328
I+ DHP + L ++ EF G L + ++ G++ Q V + +
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM-LRGIA 119
Query: 329 LALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++YL + ++R L N+LV + +SDF LS
Sbjct: 120 AGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS 156
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFPESPV 518
+ APE I+ SA D W++GI ++E++ +G+ P+ N+ + N + Q R P
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLPPPMD 238
Query: 519 VSFAARDLIRGLLVKEPQHR 538
A L+ K+ HR
Sbjct: 239 CPSALHQLMLDCWQKDRNHR 258
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 456 GTHEYLAPEIIK----GEGHGSAVDWWTFGIFLYELLFGKTPF-KGSGNRATLFNVV-GQ 509
G Y+APE I +G+ D W+ GI LYEL G+ P+ K + L VV G
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD 246
Query: 510 PLRFPESPVVSFAAR--DLIRGLLVKEPQHRLAYKRGATEIKQHPFF 554
P + S F+ + + L K+ R YK E+ +HPF
Sbjct: 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYK----ELLKHPFI 289
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 269 ILQSLDHPFLPTLYTHF--ETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAE 326
+++S D P++ Y E + + C+ + + PE+ +
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 327 VLLALEYL-HMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ AL +L L II+RD+KP N+L+ G+I L DF +S
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 217 HFRLLKR---LGCGDIGSV----YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
H R LK+ LG G G V Y GT A+K + KA G + + E +I
Sbjct: 12 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KAD-CGPQHRSGWKQEIDI 69
Query: 270 LQSLDHPFLPTLYTHFET--EKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEV 327
L++L H + E EK LVME+ P G +LR P + + ++
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQI 126
Query: 328 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ YLH I+R+L NVL+ D + + DF L+
Sbjct: 127 CEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 488
+ APE +K A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 14 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 69
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 70 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 127
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 128 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 212 VLGLSHFRLLKRLGCGDIGSVYLSEL--SGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
VL + + +G G+ G V + + G + A+K M + A + E E+
Sbjct: 18 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEV 75
Query: 270 LQSL-DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQ--------------PGKY 314
L L HP + L E + L +E+ P G+L +K
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 315 FPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
Q + + A+V ++YL I+R+L N+LV E+ ++DF LS
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 217 HFRLLKR---LGCGDIGSV----YLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREI 269
H R LK+ LG G G V Y GT A+K + KA G + + E +I
Sbjct: 12 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KAD-CGPQHRSGWKQEIDI 69
Query: 270 LQSLDHPFLPTLYTHFET--EKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEV 327
L++L H + E EK LVME+ P G +LR P + + ++
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQI 126
Query: 328 LLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ YLH I+R+L NVL+ D + + DF L+
Sbjct: 127 CEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 488
+ APE +K A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 33 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 88
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 89 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 146
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 147 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 15 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 70
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 71 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 129 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 7 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 62
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 63 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 120
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 121 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 34 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 89
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 90 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 147
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 148 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 13 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 68
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 69 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 126
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 127 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 14 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 69
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 70 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 127
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 128 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 12 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 67
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 68 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 125
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 126 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 10 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 65
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 66 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 123
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 124 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 15 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 70
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 71 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V ++YL ++RDL N ++ E + ++DF L+
Sbjct: 129 NPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K +++ ASL R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV-----VGQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFFEGVNW 559
PE DL+R P+ R + +K HP F V++
Sbjct: 258 PER------VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K +++ ASL R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 14/103 (13%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV-----VGQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFF 554
PE DL+R P R + +K HP F
Sbjct: 258 PER------VTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 294
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K +++ ASL R + L E +++
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 74
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++RDL N +V D + + DF ++
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVV-----GQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V+ QP
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 254
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFF 554
PE DL+R P+ R + +K HP F
Sbjct: 255 PER------VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 291
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 74 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 129
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 130 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 187
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V +++L ++RDL N ++ E + ++DF L+
Sbjct: 188 NPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMK-VMDKASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K V + ASL R + L E +++
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 76
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++RDL N +V D + + DF ++
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 176
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVV-----GQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V+ QP
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 256
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFFEGVNW 559
PE DL+R P+ R + +K HP F V++
Sbjct: 257 PER------VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 298
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
+++EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 100 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 15 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 70
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 71 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V +++L ++RDL N ++ E + ++DF L+
Sbjct: 129 NPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K +++ ASL R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV-----VGQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFFEGVNW 559
PE DL+R P+ R + +K HP F V++
Sbjct: 258 PER------VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 218 FRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPF 277
FRL +++G G G +YL T A+K+ + + +LL ILQ
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQG--GTG 64
Query: 278 LPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHML 337
+P + ++ LVM+ G L L K + V +++ +E++H
Sbjct: 65 IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINRVEFVHSK 122
Query: 338 GIIYRDLKPENVLV---REDGHIMLSDFDLS 365
++RD+KP+N L+ R + + DF L+
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K +++ ASL R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV-----VGQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFFEGVNW 559
PE DL+R P+ R + +K HP F V++
Sbjct: 258 PER------VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
+++EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 16 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 71
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 72 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 129
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V +++L ++RDL N ++ E + ++DF L+
Sbjct: 130 NPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL 503
+ V T Y APE+I G D W+ G ++E G T F+ NR L
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 315 FPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+P VR ++ A+++LH + + DLKPEN+L + SD++L+
Sbjct: 134 YPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENIL------FVNSDYELT 178
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 292 CLVMEFCPGGDLHTLRQKQPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV 351
++ C G L+++ + R E++ + YLH GI+++DLK +NV
Sbjct: 105 AIITSLCKGRTLYSV-VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163
Query: 352 REDGHIMLSDFDL--------------SLR------CAVSPTLIKASSLDAE 383
++G ++++DF L LR C ++P +I+ S D E
Sbjct: 164 -DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 16 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 71
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 72 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 129
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V +++L ++RDL N ++ E + ++DF L+
Sbjct: 130 NPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 20 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 75
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 76 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 133
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V +++L ++RDL N ++ E + ++DF L+
Sbjct: 134 NPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 15 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 70
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 71 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V +++L ++RDL N ++ E + ++DF L+
Sbjct: 129 NPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 201 EAIQAVRARDGVLG----LSHFRLLKRLGCGDIGSVYLSEL---SGTKCYFAMKVMDKAS 253
E +QAV+ V+G + HF + +G G G VY L G K + A+K +++ +
Sbjct: 13 ELVQAVQHV--VIGPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT 68
Query: 254 LAGRKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPG 312
G ++ + TE I++ HP L L +E +V+ + GDL + +
Sbjct: 69 DIG--EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 126
Query: 313 KYFPEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+ + F + +V +++L ++RDL N ++ E + ++DF L+
Sbjct: 127 NPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
+++EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
+++EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 205
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
+++EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
++ EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
+++EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 170
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 171 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
++ EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 293 LVMEFCPGGDLHT-LRQKQ----PGKYFPEQAVR---------FYVAEVLLALEYLHMLG 338
++ EFC G+L T LR K+ P K PE + Y +V +E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 339 IIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVR----------FYVAEVLLALEYLHMLGIIYR 342
+++EFC G+L T + + ++ P + + Y +V +E+L I+R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 343 DLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
DL N+L+ E + + DF L+ P ++
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQAVR----------FYVAEVLLALEYLHMLGIIYR 342
+++EFC G+L T + + ++ P + + Y +V +E+L I+R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHR 168
Query: 343 DLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
DL N+L+ E + + DF L+ P ++
Sbjct: 169 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPE------------QAVRFYVAEVLLALEYLHMLGII 340
+++EFC G+L T + + ++ P + + Y +V +E+L I
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI 170
Query: 341 YRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
+RDL N+L+ E + + DF L+ P ++
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K +++ ASL R + L E +++
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 78
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++R+L N +V D + + DF ++
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT 178
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 14/103 (13%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV-----VGQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 258
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFF 554
PE DL+R P R + +K HP F
Sbjct: 259 PER------VTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 295
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 220 LLKRLGCGDIGSVYLSE----LSG-TKCYFAMKVMDK-ASLAGRKKLLRAQTEREILQSL 273
LL+ LG G G VY + G + A+K +++ ASL R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 274 DHPFLPTLYTHFETEKFSCLVMEFCPGGDL----HTLR---QKQPGKYFPE-QAVRFYVA 325
+ L + + +VME GDL +LR + PG+ P Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 326 EVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
E+ + YL+ ++R+L N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 14/103 (13%)
Query: 460 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNV-----VGQPLRF 513
++APE +K ++ D W+FG+ L+E+ + P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 514 PESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQ--HPFF 554
PE DL+R P R + +K HP F
Sbjct: 258 PER------VTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 294
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 293 LVMEFCPGGDLHTLRQKQPGKYFPEQA-------------VRFYVAEVLLALEYLHMLGI 339
+++EFC G+L T + + ++ P + + Y +V +E+L
Sbjct: 110 VIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC 169
Query: 340 IYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIK 376
I+RDL N+L+ E + + DF L+ P ++
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 496
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFPESP 517
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
D+++ +P R +K+
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQ 313
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 257 RKKLLRAQTEREILQSLDHP-FLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYF 315
+K ++ ER+ L L P F + T F+ + +VME G DL + Q G +
Sbjct: 92 KKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKI-SGQNGTFK 149
Query: 316 PEQAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLV--REDGHIMLSDFDLSLR 367
++ + +L LEY+H ++ D+K N+L+ + + L+D+ LS R
Sbjct: 150 KSTVLQLGI-RMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYR 202
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 220 LLKRLGCGDIGSVYLSELSGTK-------CYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L K LG G G V ++E G A+K++ A K L +E E+++
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 273 L-DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHT-LRQKQP-GKYF-------PEQAVRF 322
+ H + TL + +++E+ G+L LR ++P G + PE+ + F
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 323 Y-----VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
++ +EYL I+RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 220 LLKRLGCGDIGSVYLSELSGTK-------CYFAMKVMDKASLAGRKKLLRAQTEREILQS 272
L K LG G G V L+E G A+K++ S A K L +E E+++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 89
Query: 273 L-DHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQ--PGKYF-------PEQAVRF 322
+ H + L + +++E+ G+L Q + PG F PE+ +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 323 Y-----VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLS 365
+V +EYL I+RDL NVLV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFPESP 517
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
D+++ +P R +K+
Sbjct: 272 HAPAEMYDIMKTCWDADPLKRPTFKQ 297
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFPESP 517
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
D+++ +P R +K+
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQ 315
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFPESP 517
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
D+++ +P R +K+
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 459 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSGNRATLFNVVGQPLRFPESP 517
+++APE I + D W++GIFL+EL G +P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 518 VVSFAARDLIRGLLVKEPQHRLAYKR 543
D+++ +P R +K+
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 224 LGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYT 283
LG G G VY L+ ++ ++ + G L+ QTE E++ H L L
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGE---LQFQTEVEMISMAVHRNLLRLRG 94
Query: 284 HFETEKFSCLVMEFCPGGDLHT-LRQK---QPGKYFPE-QAVRFYVAEVLLALEYLHML- 337
T LV + G + + LR++ QP +P+ Q + A L YLH
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR---GLAYLHDHC 151
Query: 338 --GIIYRDLKPENVLVREDGHIMLSDFDLS 365
II+RD+K N+L+ E+ ++ DF L+
Sbjct: 152 DPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 205 AVRARDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLAGRKKLLRAQ 264
+V A + +R + +LG G G VY + + T A+K + L ++ +
Sbjct: 23 SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIK---RIRLEHEEEGVPGT 79
Query: 265 TEREI--LQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKYFPEQAVRF 322
RE+ L+ L H + L + L+ E+ DL K P + ++
Sbjct: 80 AIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD--VSMRVIKS 136
Query: 323 YVAEVLLALEYLHMLGIIYRDLKPENVLV 351
++ +++ + + H ++RDLKP+N+L+
Sbjct: 137 FLYQLINGVNFCHSRRCLHRDLKPQNLLL 165
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 453 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATL 503
+ V T Y PE+I G D W+ G L+E G T F+ NR L
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 285 FETEKFSCLVMEFCPGGDLHTLRQK--QPGKYFPEQAVRFYVAEVLLALEYLHMLGIIYR 342
F C+ E L++ QP +P VR ++ AL +LH + +
Sbjct: 91 FNFHGHMCIAFELLGKNTFEFLKENNFQP---YPLPHVRHMAYQLCHALRFLHENQLTHT 147
Query: 343 DLKPENVL 350
DLKPEN+L
Sbjct: 148 DLKPENIL 155
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,847,574
Number of Sequences: 62578
Number of extensions: 673762
Number of successful extensions: 4136
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 1330
Number of HSP's gapped (non-prelim): 2113
length of query: 611
length of database: 14,973,337
effective HSP length: 105
effective length of query: 506
effective length of database: 8,402,647
effective search space: 4251739382
effective search space used: 4251739382
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)