BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007261
(611 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 156/298 (52%), Gaps = 28/298 (9%)
Query: 316 LKFYKYEDLVVATENFSPKNMID----GSVFRG-IINGSTVAIKCMRR--------SISK 362
LK + +L VA++NFS KN++ G V++G + +G+ VA+K ++
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEF---VSWNCRF 419
EV ++ H NL+ L G C LVY +M NGS++ L ++ PE + W R
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER--PESQPPLDWPKRQ 142
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
RIAL A GL YLH+ DP +H+D+ + NILLD+ A + +F + + +
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDXHVX 200
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA---AYKQDGEEILLAEAV 536
GT G++APEY+ G + + D + +GV+LLELITG+ A A + ++++L
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML---- 256
Query: 537 FSMVEGGNAEAKLSVLVDPNLQAN-KKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
V+G E KL LVD +LQ N K E LI + L C P RP M+EVV L
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 28/298 (9%)
Query: 316 LKFYKYEDLVVATENFSPKNMID----GSVFRG-IINGSTVAIKCMRRSISK-------- 362
LK + +L VA++NF KN++ G V++G + +G VA+K ++ ++
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEF---VSWNCRF 419
EV ++ H NL+ L G C LVY +M NGS++ L ++ PE + W R
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER--PESQPPLDWPKRQ 134
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
RIAL A GL YLH+ DP +H+D+ + NILLD+ A + +F + + +
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDXHVX 192
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA---AYKQDGEEILLAEAV 536
G G++APEY+ G + + D + +GV+LLELITG+ A A + ++++L + V
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 537 FSMVEGGNAEAKLSVLVDPNLQAN-KKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+++ E KL LVD +LQ N K E LI + L C P RP M+EVV L
Sbjct: 253 KGLLK----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 29/289 (10%)
Query: 323 DLVVATENFSPKNMID----GSVFRGII-NGSTVAIKCMRRS---------ISKEVNLLK 368
DL AT NF K +I G V++G++ +G+ VA+K RR+ E+ L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK--RRTPESSQGIEEFETEIETLS 90
Query: 369 KINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEF-VSWNCRFRIALDVAH 427
H +L++L G C+ L+Y++MENG+L L+ P +SW R I + A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 428 GLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAV-GTN 486
GLHYLH +H+D+ S NILLD+N K+ +F + E G + V GT
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGT--ELGQTHLXXVVKGTL 205
Query: 487 GYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL-LAEAVFSMVEGGNA 545
GY+ PEY G +T + D Y+FGVVL E++ + A + E++ LAE VE N
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA---VESHN- 261
Query: 546 EAKLSVLVDPNLQAN-KKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+L +VDPNL + E + C+A E RPSM +V+ L
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 323 DLVVATENFSPKNMID----GSVFRGII-NGSTVAIKCMRRS---------ISKEVNLLK 368
DL AT NF K +I G V++G++ +G+ VA+K RR+ E+ L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK--RRTPESSQGIEEFETEIETLS 90
Query: 369 KINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEF-VSWNCRFRIALDVAH 427
H +L++L G C+ L+Y++MENG+L L+ P +SW R I + A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 428 GLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNG 487
GLHYLH +H+D+ S NILLD+N K+ +F + + + GT G
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX-VVKGTLG 206
Query: 488 YMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL-LAEAVFSMVEGGNAE 546
Y+ PEY G +T + D Y+FGVVL E++ + A + E++ LAE VE N
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA---VESHN-N 262
Query: 547 AKLSVLVDPNLQAN-KKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+L +VDPNL + E + C+A E RPSM +V+ L
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 16/205 (7%)
Query: 339 GSVFRGIINGSTVAIKCM-----------RRSISKEVNLLKKINHFNLINLFGACEHDGV 387
G V++G +N +TVA+K + ++ +E+ ++ K H NL+ L G
Sbjct: 45 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
LVY +M NGSL D L +SW+ R +IA A+G+++LH + ++H+DI S
Sbjct: 105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKS 161
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILLD+ AK+++F R++ + ++ VGT YMAPE + G +TP+ D Y+
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXSRI-VGTTAYMAPEALR-GEITPKSDIYS 219
Query: 508 FGVVLLELITGKEAAYKQDGEEILL 532
FGVVLLE+ITG A + ++LL
Sbjct: 220 FGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 16/205 (7%)
Query: 339 GSVFRGIINGSTVAIKCM-----------RRSISKEVNLLKKINHFNLINLFGACEHDGV 387
G V++G +N +TVA+K + ++ +E+ ++ K H NL+ L G
Sbjct: 45 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
LVY +M NGSL D L +SW+ R +IA A+G+++LH + ++H+DI S
Sbjct: 105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKS 161
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILLD+ AK+++F R++ + + VGT YMAPE + G +TP+ D Y+
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMXXRI-VGTTAYMAPEALR-GEITPKSDIYS 219
Query: 508 FGVVLLELITGKEAAYKQDGEEILL 532
FGVVLLE+ITG A + ++LL
Sbjct: 220 FGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 16/205 (7%)
Query: 339 GSVFRGIINGSTVAIKCM-----------RRSISKEVNLLKKINHFNLINLFGACEHDGV 387
G V++G +N +TVA+K + ++ +E+ ++ K H NL+ L G
Sbjct: 39 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 98
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
LVY +M NGSL D L +SW+ R +IA A+G+++LH + ++H+DI S
Sbjct: 99 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKS 155
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILLD+ AK+++F R++ + + VGT YMAPE + G +TP+ D Y+
Sbjct: 156 ANILLDEAFTAKISDFGLARASEKFAQXVMXXRI-VGTTAYMAPEALR-GEITPKSDIYS 213
Query: 508 FGVVLLELITGKEAAYKQDGEEILL 532
FGVVLLE+ITG A + ++LL
Sbjct: 214 FGVVLLEIITGLPAVDEHREPQLLL 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 16/205 (7%)
Query: 339 GSVFRGIINGSTVAIKCM-----------RRSISKEVNLLKKINHFNLINLFGACEHDGV 387
G V++G +N +TVA+K + ++ +E+ + K H NL+ L G
Sbjct: 36 GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDD 95
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
LVY + NGSL D L +SW+ R +IA A+G+++LH + ++H+DI S
Sbjct: 96 LCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKS 152
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILLD+ AK+++F R++ + ++ VGT Y APE + G +TP+ D Y+
Sbjct: 153 ANILLDEAFTAKISDFGLARASEKFAQXVXXSRI-VGTTAYXAPEALR-GEITPKSDIYS 210
Query: 508 FGVVLLELITGKEAAYKQDGEEILL 532
FGVVLLE+ITG A + ++LL
Sbjct: 211 FGVVLLEIITGLPAVDEHREPQLLL 235
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 30/264 (11%)
Query: 339 GSVFRGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V R +GS VA+K + +EV ++K++ H N++ GA
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+V E++ GSL LHK E + R +A DVA G++YLHN +P VH+++ S N
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPN 169
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
+L+DK K+ +F R + S + S+K+A GT +MAPE + + D Y+FG
Sbjct: 170 LLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 510 VVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLI 569
V+L EL T ++ + +++ A G +L + + N Q +
Sbjct: 227 VILWELATLQQPWGNLNPAQVVAAV--------GFKCKRLEIPRNLNPQ---------VA 269
Query: 570 MLCLACIAREPESRPSMAEVVSTL 593
+ C EP RPS A ++ L
Sbjct: 270 AIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 30/264 (11%)
Query: 339 GSVFRGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V R +GS VA+K + +EV ++K++ H N++ GA
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+V E++ GSL LHK E + R +A DVA G++YLHN +P VH+D+ S N
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRDLKSPN 169
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
+L+DK K+ +F R + S + +K A GT +MAPE + + D Y+FG
Sbjct: 170 LLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 510 VVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLI 569
V+L EL T ++ + +++ A G +L + + N Q +
Sbjct: 227 VILWELATLQQPWGNLNPAQVVAAV--------GFKCKRLEIPRNLNPQ---------VA 269
Query: 570 MLCLACIAREPESRPSMAEVVSTL 593
+ C EP RPS A ++ L
Sbjct: 270 AIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 41/260 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 281 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 339
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 340 TEYMSKGSLLDFLKGETGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 390
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 391 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G + P E
Sbjct: 449 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERG-----YRMPCPP-------ECPE 491
Query: 567 HLIMLCLACIAREPESRPSM 586
L L C +EPE RP+
Sbjct: 492 SLHDLMCQCWRKEPEERPTF 511
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 41/260 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 256
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 307
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 308 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G + P E
Sbjct: 366 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERG-----YRMPCPP-------ECPE 408
Query: 567 HLIMLCLACIAREPESRPSM 586
L L C +EPE RP+
Sbjct: 409 SLHDLMCQCWRKEPEERPTF 428
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 41/260 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 256
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 307
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 308 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G + P E
Sbjct: 366 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERG-----YRMPCPP-------ECPE 408
Query: 567 HLIMLCLACIAREPESRPSM 586
L L C +EPE RP+
Sbjct: 409 SLHDLMCQCWRKEPEERPTF 428
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 25 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 83
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 84 TEYMSKGSLLDFLKGETGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 134
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 135 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 193 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 235
Query: 567 HLIMLCLACIAREPESRPS 585
L L C +EPE RP+
Sbjct: 236 SLHDLMCQCWRKEPEERPT 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 41/260 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 256
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 257 GEYMSKGSLLDFLKGETGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 307
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 308 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G + P E
Sbjct: 366 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERG-----YRMPCPP-------ECPE 408
Query: 567 HLIMLCLACIAREPESRPSM 586
L L C +EPE RP+
Sbjct: 409 SLHDLMCQCWRKEPEERPTF 428
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 91
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 92 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 145
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ Y++ + A + APE + YG T + D ++FG
Sbjct: 146 ILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 204 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 247
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 248 LMRLCW---KERPEDRPTFDYLRSVL 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KKI H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 37 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 95
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 96 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 149
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ Y++ + A + APE + YG T + D ++FG
Sbjct: 150 ILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 207
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 208 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 251
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 252 LMRLCW---KERPEDRPTFDYLRSVL 274
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 90
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 91 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 144
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ Y++ + A + APE + YG T + D ++FG
Sbjct: 145 ILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 202
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 203 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 246
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 247 LMRLCW---KERPEDRPTFDYLRSVL 269
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D++
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLA 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 23 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 81
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 82 TEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 132
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 133 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 191 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 233
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 234 SLHDLMCQCWRKDPEERPT 252
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 80
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 81 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 134
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ Y++ + A + APE + YG T + D ++FG
Sbjct: 135 ILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 192
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 193 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 236
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 237 LMRLCW---KERPEDRPTFDYLRSVL 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 126/264 (47%), Gaps = 35/264 (13%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 85
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
E+MENGSL D+L + N +A +A G+ ++ + Y+H+D+ + NIL
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANIL 141
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVV 511
+ L K+A+F R + E++ Y++ + A + APE + YG T + D ++FG++
Sbjct: 142 VSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 512 LLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLI 569
L E++T Y + E I E + MV N +L + L+
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQLM 243
Query: 570 MLCLACIAREPESRPSMAEVVSTL 593
LC PE RP+ + S L
Sbjct: 244 RLCW---KERPEDRPTFDYLRSVL 264
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 87
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V ++ +A G+ Y+ YVH+D+
Sbjct: 88 TEYMNKGSLLDFLKGETGKYLRLPQLVD------MSAQIASGMAYVERMN---YVHRDLR 138
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 139 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G + P E
Sbjct: 197 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERG-----YRMPCPP-------ECPE 239
Query: 567 HLIMLCLACIAREPESRPS 585
L L C +EPE RP+
Sbjct: 240 SLHDLMCQCWRKEPEERPT 258
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 21 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 79
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 80 TEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 130
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 131 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 189 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 231
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 232 SLHDLMCQCWRKDPEERPT 250
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 91 TEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 91 CEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 41/260 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 199 GEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 257
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 258 TEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 308
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 309 AANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G + P E
Sbjct: 367 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERG-----YRMPCPP-------ECPE 409
Query: 567 HLIMLCLACIAREPESRPSM 586
L L C ++PE RP+
Sbjct: 410 SLHDLMCQCWRKDPEERPTF 429
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 87
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V ++ +A G+ Y+ YVH+D+
Sbjct: 88 TEYMNKGSLLDFLKGETGKYLRLPQLVD------MSAQIASGMAYVERMN---YVHRDLR 138
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ +++ + A + APE YG T + D +
Sbjct: 139 AANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G + P E
Sbjct: 197 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERG-----YRMPCPP-------ECPE 239
Query: 567 HLIMLCLACIAREPESRPS 585
L L C +EPE RP+
Sbjct: 240 SLHDLMCQCWRKEPEERPT 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 23 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 81
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+++ + N
Sbjct: 82 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAAN 135
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ Y++ + A + APE + YG T + D ++FG
Sbjct: 136 ILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 193
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 194 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 237
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 238 LMRLCW---KERPEDRPTFDYLRSVL 260
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 91
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 92 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 145
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG
Sbjct: 146 ILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 204 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 247
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 248 LMRLCW---KERPEDRPTFDYLRSVL 270
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M G L D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 91 MEYMSKGCLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 35 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 93
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 94 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 147
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG
Sbjct: 148 ILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 205
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 206 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 249
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 250 LMRLCW---KERPEDRPTFDYLRSVL 272
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M G L D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 91 TEYMSKGCLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ Y++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 85
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 86 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 139
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG
Sbjct: 140 ILVSDTLSCKIADFGLAR--LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 241
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 242 LMRLCW---KERPEDRPTFDYLRSVL 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 36 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 94
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 95 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 148
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG
Sbjct: 149 ILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 206
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 207 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 250
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 251 LMRLCW---KERPEDRPTFDYLRSVL 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 39/266 (14%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 85
Query: 392 YEFMENGSLSDWLHKKRYPEFV--SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E+MENGSL D+L + P + + N +A +A G+ ++ + Y+H+D+ + N
Sbjct: 86 TEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAAN 139
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
IL+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG
Sbjct: 140 ILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 510 VVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
++L E++T Y + E I E + MV N +L +
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQ 241
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
L+ LC PE RP+ + S L
Sbjct: 242 LMRLCW---KERPEDRPTFDYLRSVL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 35/264 (13%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 87
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
E+MENGSL D+L + N +A +A G+ ++ + Y+H+D+ + NIL
Sbjct: 88 TEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANIL 143
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVV 511
+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG++
Sbjct: 144 VSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 512 LLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLI 569
L E++T Y + E I E + MV N +L + L+
Sbjct: 202 LTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQLM 245
Query: 570 MLCLACIAREPESRPSMAEVVSTL 593
LC PE RP+ + S L
Sbjct: 246 RLCW---KERPEDRPTFDYLRSVL 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 35/264 (13%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 86
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
E+MENGSL D+L + N +A +A G+ ++ + Y+H+D+ + NIL
Sbjct: 87 TEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANIL 142
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVV 511
+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG++
Sbjct: 143 VSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 512 LLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLI 569
L E++T Y + E I E + MV N +L + L+
Sbjct: 201 LTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQLM 244
Query: 570 MLCLACIAREPESRPSMAEVVSTL 593
LC PE RP+ + S L
Sbjct: 245 RLCW---KERPEDRPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 35/264 (13%)
Query: 339 GSVFRGIINGST-VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG T VA+K +++ + E NL+K++ H L+ L+ + + Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YII 85
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
E+MENGSL D+L + N +A +A G+ ++ + Y+H+D+ + NIL
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANIL 141
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVV 511
+ L K+A+F R + E++ ++ + A + APE + YG T + D ++FG++
Sbjct: 142 VSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 512 LLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLI 569
L E++T Y + E I E + MV N +L + L+
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL----------------YQLM 243
Query: 570 MLCLACIAREPESRPSMAEVVSTL 593
LC PE RP+ + S L
Sbjct: 244 RLCW---KERPEDRPTFDYLRSVL 264
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIV 90
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 91 IEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 141
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ ++ + A + APE YG T + D +
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 200 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 242
Query: 567 HLIMLCLACIAREPESRPS 585
L L C ++PE RP+
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 41/259 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ + +E ++KK+ H L+ L+ + + +V
Sbjct: 22 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIV 80
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + R P+ V +A +A G+ Y+ YVH+D+
Sbjct: 81 TEYMSKGSLLDFLKGETGKYLRLPQLVD------MAAQIASGMAYVERMN---YVHRDLR 131
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +NL K+A+F R + E++ ++ + A + APE YG T + D +
Sbjct: 132 AANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL T Y ++ V VE G E
Sbjct: 190 SFGILLTELTTKGRVPYPG-----MVNREVLDQVERGYR------------MPCPPECPE 232
Query: 567 HLIMLCLACIAREPESRPS 585
L L C +EPE RP+
Sbjct: 233 SLHDLMCQCWRKEPEERPT 251
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 50/286 (17%)
Query: 342 FRGIINGSTVAIKCMR--------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
+G +TVA+K ++ R + E N+LK++NH ++I L+GAC DG L+ E
Sbjct: 47 LKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106
Query: 394 FMENGSLSDWLHKKR-------------------YPE--FVSWNCRFRIALDVAHGLHYL 432
+ + GSL +L + R +P+ ++ A ++ G+ YL
Sbjct: 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166
Query: 433 HNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE 492
+ VH+D+++ NIL+ + + K+++F R E+S ++ + +MA E
Sbjct: 167 AEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIE 222
Query: 493 YMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVL 552
+ + T + D ++FGV+L E++T Y + E +F++++ G+ +
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-----IPPERLFNLLKTGHRMER---- 273
Query: 553 VDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKIQL 598
P+ + + L L C +EP+ RP A++ L K+ +
Sbjct: 274 --PD------NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 23/191 (12%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G N ST VA+K ++ ++ +E NL+K + H L+ L+ + Y++
Sbjct: 27 GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYII 86
Query: 392 YEFMENGSLSDWLH-----KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L K P+ + ++ + +A G+ Y+ Y+H+D+
Sbjct: 87 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ------IAEGMAYIER---KNYIHRDLR 137
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ N+L+ ++L K+A+F R V E++ Y++ + A + APE + +G T + D +
Sbjct: 138 AANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 507 AFGVVLLELIT 517
+FG++L E++T
Sbjct: 196 SFGILLYEIVT 206
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 50/286 (17%)
Query: 342 FRGIINGSTVAIKCMR--------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
+G +TVA+K ++ R + E N+LK++NH ++I L+GAC DG L+ E
Sbjct: 47 LKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106
Query: 394 FMENGSLSDWLHKKR-------------------YPE--FVSWNCRFRIALDVAHGLHYL 432
+ + GSL +L + R +P+ ++ A ++ G+ YL
Sbjct: 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166
Query: 433 HNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE 492
VH+D+++ NIL+ + + K+++F R E+S ++ + +MA E
Sbjct: 167 AEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIE 222
Query: 493 YMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVL 552
+ + T + D ++FGV+L E++T Y + E +F++++ G+ +
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-----IPPERLFNLLKTGHRMER---- 273
Query: 553 VDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKIQL 598
P+ + + L L C +EP+ RP A++ L K+ +
Sbjct: 274 --PD------NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 64/306 (20%)
Query: 320 KYEDLVVATENFSPKNMIDGSVFRGIINGSTV----AIKCMR--------RSISKEVNLL 367
K++D V+ NF G V + I + AIK M+ R + E+ +L
Sbjct: 18 KFQD-VIGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 69
Query: 368 KKINHF-NLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRY----PEFVSWNCR---- 418
K+ H N+INL GACEH G YL E+ +G+L D+L K R P F N
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 419 -----FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSA---V 470
A DVA G+ YL + ++H+D+++ NIL+ +N AK+A+F R V
Sbjct: 130 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 186
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
++ G + +MA E + Y + T D +++GV+L E+++ Y +
Sbjct: 187 KKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----M 235
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
AE + +G E L+ + L C +P RPS A+++
Sbjct: 236 TCAELYEKLPQGYRLEKPLNC-------------DDEVYDLMRQCWREKPYERPSFAQIL 282
Query: 591 STLMKI 596
+L ++
Sbjct: 283 VSLNRM 288
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 118/279 (42%), Gaps = 49/279 (17%)
Query: 339 GSVFRGIINGSTVAIKCMR-----------RSISKEVNLLKKINHFNLINLFGACEHDGV 387
G V+R G VA+K R ++ +E L + H N+I L G C +
Sbjct: 21 GKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 388 FYLVYEFMENGSLSDWLHKKRYPE--FVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDI 445
LV EF G L+ L KR P V+W A+ +A G++YLH+ +H+D+
Sbjct: 81 LCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDL 134
Query: 446 SSGNILLDKNLR--------AKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYG 497
S NIL+ + + K+ +F R R ++ +A G +MAPE +
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLAREWHR-----TTKMSAAGAYAWMAPEVIRAS 189
Query: 498 LVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNL 557
+ + D +++GV+L EL+TG+ DG LA A G A KL++ +
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRGIDG----LAVAY------GVAMNKLALPI---- 235
Query: 558 QANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L C +P SRPS ++ L I
Sbjct: 236 ---PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 50/286 (17%)
Query: 342 FRGIINGSTVAIKCMR--------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
+G +TVA+K ++ R + E N+LK++NH ++I L+GAC DG L+ E
Sbjct: 47 LKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106
Query: 394 FMENGSLSDWLHKKR-------------------YPE--FVSWNCRFRIALDVAHGLHYL 432
+ + GSL +L + R +P+ ++ A ++ G+ YL
Sbjct: 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166
Query: 433 HNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE 492
VH+D+++ NIL+ + + K+++F R E+S ++ + +MA E
Sbjct: 167 AEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK-WMAIE 222
Query: 493 YMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVL 552
+ + T + D ++FGV+L E++T Y + E +F++++ G+ +
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-----IPPERLFNLLKTGHRMER---- 273
Query: 553 VDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKIQL 598
P+ + + L L C +EP+ RP A++ L K+ +
Sbjct: 274 --PD------NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 64/306 (20%)
Query: 320 KYEDLVVATENFSPKNMIDGSVFRGIINGSTV----AIKCMR--------RSISKEVNLL 367
K++D V+ NF G V + I + AIK M+ R + E+ +L
Sbjct: 28 KFQD-VIGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 79
Query: 368 KKINHF-NLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRY----PEFVSWNCR---- 418
K+ H N+INL GACEH G YL E+ +G+L D+L K R P F N
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 419 -----FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSA---V 470
A DVA G+ YL + ++H+D+++ NIL+ +N AK+A+F R V
Sbjct: 140 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
++ G + +MA E + Y + T D +++GV+L E+++ Y +
Sbjct: 197 KKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----M 245
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
AE + +G E L+ + L C +P RPS A+++
Sbjct: 246 TCAELYEKLPQGYRLEKPLNC-------------DDEVYDLMRQCWREKPYERPSFAQIL 292
Query: 591 STLMKI 596
+L ++
Sbjct: 293 VSLNRM 298
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 23/191 (12%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G N ST VA+K ++ ++ +E NL+K + H L+ L+ + Y++
Sbjct: 26 GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 85
Query: 392 YEFMENGSLSDWLH-----KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
EFM GSL D+L K P+ + ++ + +A G+ Y+ Y+H+D+
Sbjct: 86 TEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ------IAEGMAYIER---KNYIHRDLR 136
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ N+L+ ++L K+A+F R V E++ Y++ + A + APE + +G T + + +
Sbjct: 137 AANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 507 AFGVVLLELIT 517
+FG++L E++T
Sbjct: 195 SFGILLYEIVT 205
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 41/267 (15%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ G NG+T VAIK ++ S +E ++KK+ H L+ L+ + + Y+V
Sbjct: 23 GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIV 81
Query: 392 YEFMENGSLSDWLHKK-----RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
E+M GSL D+L + P V +A VA G+ Y+ Y+H+D+
Sbjct: 82 TEYMNKGSLLDFLKDGEGRALKLPNLVD------MAAQVAAGMAYIERMN---YIHRDLR 132
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
S NIL+ L K+A+F R + E++ ++ + A + APE YG T + D +
Sbjct: 133 SANILVGNGLICKIADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
+FG++L EL+T Y + V VE G ++ D I+
Sbjct: 191 SFGILLTELVTKGRVPYPG-----MNNREVLEQVERG---YRMPCPQD-------CPISL 235
Query: 567 HLIMLCLACIAREPESRPSMAEVVSTL 593
H +M + C ++PE RP+ + S L
Sbjct: 236 HELM--IHCWKKDPEERPTFEYLQSFL 260
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 64/306 (20%)
Query: 320 KYEDLVVATENFSPKNMIDGSVFRGIINGSTV----AIKCMR--------RSISKEVNLL 367
K++D V+ NF G V + I + AIK M+ R + E+ +L
Sbjct: 25 KFQD-VIGEGNF-------GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 76
Query: 368 KKINHF-NLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRY----PEFVSWNCR---- 418
K+ H N+INL GACEH G YL E+ +G+L D+L K R P F N
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 419 -----FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSA---V 470
A DVA G+ YL + ++H+++++ NIL+ +N AK+A+F R V
Sbjct: 137 SSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
++ G + +MA E + Y + T D +++GV+L E+++ Y +
Sbjct: 194 KKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----M 242
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
AE + +G E L+ + L C +P RPS A+++
Sbjct: 243 TCAELYEKLPQGYRLEKPLNC-------------DDEVYDLMRQCWREKPYERPSFAQIL 289
Query: 591 STLMKI 596
+L ++
Sbjct: 290 VSLNRM 295
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 346 INGSTVAIKCMRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+N VAIK +R +E ++ K++H L+ L+G C LV+EFME+G
Sbjct: 29 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
LSD+L +R + + LDV G+ YL + +H+D+++ N L+ +N K
Sbjct: 89 LSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIK 143
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F R + ++ Y+S+ + +PE + + + D ++FGV++ E+ +
Sbjct: 144 VSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 201
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
+ Y+ +E V + G L P L + H+ + C
Sbjct: 202 KIPYENRSN----SEVVEDISTGFR-------LYKPRLAST------HVYQIMNHCWKER 244
Query: 580 PESRPSMAEVVSTLMKI 596
PE RP+ + ++ L I
Sbjct: 245 PEDRPAFSRLLRQLAAI 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 339 GSVFRGIINGSTVAIKCMR-----RSISKEVNLLKKINHFNLINLFGA-CEHDGVFYLVY 392
G V G G+ VA+KC++ ++ E +++ ++ H NL+ L G E G Y+V
Sbjct: 26 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 85
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E+M GSL D+L + R + +C + +LDV + YL +VH+D+++ N+L+
Sbjct: 86 EYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 141
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
++ AK+++F + A S+ T + APE + + + D ++FG++L
Sbjct: 142 SEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILL 195
Query: 513 LELITGKEAAY 523
E+ + Y
Sbjct: 196 WEIYSFGRVPY 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 346 INGSTVAIKCMRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+N VAIK +R +E ++ K++H L+ L+G C LV+EFME+G
Sbjct: 29 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
LSD+L +R + + LDV G+ YL +H+D+++ N L+ +N K
Sbjct: 89 LSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIK 143
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F R + ++ Y+S+ + +PE + + + D ++FGV++ E+ +
Sbjct: 144 VSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 201
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
+ Y+ +E V + G L P L + H+ + C
Sbjct: 202 KIPYENRSN----SEVVEDISTGFR-------LYKPRLAST------HVYQIMNHCWKER 244
Query: 580 PESRPSMAEVVSTLMKI 596
PE RP+ + ++ L +I
Sbjct: 245 PEDRPAFSRLLRQLAEI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 346 INGSTVAIKCMRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+N VAIK +R +E ++ K++H L+ L+G C LV+EFME+G
Sbjct: 27 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 86
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
LSD+L +R + + LDV G+ YL +H+D+++ N L+ +N K
Sbjct: 87 LSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIK 141
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F R + ++ Y+S+ + +PE + + + D ++FGV++ E+ +
Sbjct: 142 VSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 199
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
+ Y+ +E V + G L P L + H+ + C
Sbjct: 200 KIPYENRSN----SEVVEDISTGFR-------LYKPRLAST------HVYQIMNHCWKER 242
Query: 580 PESRPSMAEVVSTLMKI 596
PE RP+ + ++ L +I
Sbjct: 243 PEDRPAFSRLLRQLAEI 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 346 INGSTVAIKCMRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+N VAIK +R +E ++ K++H L+ L+G C LV+EFME+G
Sbjct: 32 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 91
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
LSD+L +R + + LDV G+ YL +H+D+++ N L+ +N K
Sbjct: 92 LSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIK 146
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F R + ++ Y+S+ + +PE + + + D ++FGV++ E+ +
Sbjct: 147 VSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 204
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
+ Y+ +E V + G L P L + H+ + C
Sbjct: 205 KIPYENRSN----SEVVEDISTGFR-------LYKPRLAST------HVYQIMNHCWRER 247
Query: 580 PESRPSMAEVVSTLMKI 596
PE RP+ + ++ L +I
Sbjct: 248 PEDRPAFSRLLRQLAEI 264
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 339 GSVFRGIINGSTVAIKCMR-----RSISKEVNLLKKINHFNLINLFGA-CEHDGVFYLVY 392
G V G G+ VA+KC++ ++ E +++ ++ H NL+ L G E G Y+V
Sbjct: 207 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E+M GSL D+L + R + +C + +LDV + YL +VH+D+++ N+L+
Sbjct: 267 EYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 322
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
++ AK+++F + A S+ T + APE + + + D ++FG++L
Sbjct: 323 SEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376
Query: 513 LELITGKEAAY 523
E+ + Y
Sbjct: 377 WEIYSFGRVPY 387
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 339 GSVFRGIINGSTVAIKCMR-----RSISKEVNLLKKINHFNLINLFGA-CEHDGVFYLVY 392
G V G G+ VA+KC++ ++ E +++ ++ H NL+ L G E G Y+V
Sbjct: 20 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E+M GSL D+L + R + +C + +LDV + YL +VH+D+++ N+L+
Sbjct: 80 EYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 135
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
++ AK+++F + A S+ T + APE + + + D ++FG++L
Sbjct: 136 SEDNVAKVSDFGLTKEA------SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189
Query: 513 LELITGKEAAY 523
E+ + Y
Sbjct: 190 WEIYSFGRVPY 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 339 GSVFRGIINGSTVAIKCMR-----RSISKEVNLLKKINHFNLINLFGA-CEHDGVFYLVY 392
G V G G+ VA+KC++ ++ E +++ ++ H NL+ L G E G Y+V
Sbjct: 35 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E+M GSL D+L + R + +C + +LDV + YL +VH+D+++ N+L+
Sbjct: 95 EYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 150
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
++ AK+++F + A S+ T + APE + + + D ++FG++L
Sbjct: 151 SEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 204
Query: 513 LELITGKEAAY 523
E+ + Y
Sbjct: 205 WEIYSFGRVPY 215
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 92 ITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 147
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 148 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 206 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 87 IIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 142
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 143 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 201 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 30/254 (11%)
Query: 351 VAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIK + RR E +++ + +H N+I+L G +V E+MENGSL
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 403 WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLAN 462
+L KK +F + ++ G+ YL +D GYVH+D+++ NIL++ NL K+++
Sbjct: 113 FL-KKNDGQFTVIQL-VGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSD 167
Query: 463 FSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAA 522
F R + +T+ + APE + + T D +++G+V+ E+++ E
Sbjct: 168 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
Query: 523 YKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPES 582
Y + + + V VE G +L +D L L L C +E S
Sbjct: 228 YWE-----MTNQDVIKAVEEG---YRLPSPMD---------CPAALYQLMLDCWQKERNS 270
Query: 583 RPSMAEVVSTLMKI 596
RP E+V+ L K+
Sbjct: 271 RPKFDEIVNMLDKL 284
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 87 IIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 142
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 143 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 201 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 164
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 165 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 224 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 266
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 267 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 87 ITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 142
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 143 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 201 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 160
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 220 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 262
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 216
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 276 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 318
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 319 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 167
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 168 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 227 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 269
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 270 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 87 ITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 142
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 143 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 201 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 30/257 (11%)
Query: 346 INGSTVAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+N VAIK ++ S+S+ E ++ K++H L+ L+G C LV+EFME+G
Sbjct: 49 LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 108
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
LSD+L +R + + LDV G+ YL +H+D+++ N L+ +N K
Sbjct: 109 LSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIK 163
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F R + ++ Y+S+ + +PE + + + D ++FGV++ E+ +
Sbjct: 164 VSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 221
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
+ Y+ +E V + G L P L + H+ + C
Sbjct: 222 KIPYENRSN----SEVVEDISTGFR-------LYKPRLAST------HVYQIMNHCWKER 264
Query: 580 PESRPSMAEVVSTLMKI 596
PE RP+ + ++ L +I
Sbjct: 265 PEDRPAFSRLLRQLAEI 281
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 175
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 277
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 168
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 169 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 228 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 270
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 271 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 35/261 (13%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 85 IIEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 140
Query: 451 LLDKNLRAKLANFSFVRSAVRE-ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
L+ +N K+A+F R + + ++ K + + APE + Y + + D +AFG
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFG 197
Query: 510 VVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHL 568
V+L E+ T + Y G +++ L++ + + + E +
Sbjct: 198 VLLWEIATYGMSPYP------------------GIDPSQVYELLEKDYRMERPEGCPEKV 239
Query: 569 IMLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 229
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 230 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 288
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 289 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 331
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 332 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 175
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 277
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 363 EVNLLKKINHFNLINLFGACEH----DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCR 418
EV L + H N++ GA + D +L+ F E GSLSD+L VSWN
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNEL 123
Query: 419 FRIALDVAHGLHYLH-------NCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVR 471
IA +A GL YLH + P H+DI S N+LL NL A +A+F A++
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL---ALK 180
Query: 472 EESGYSSTKT--AVGTNGYMAPEYMEYGL-----VTPEMDTYAFGVVLLELITGKEAA 522
E+G S+ T VGT YMAPE +E + +D YA G+VL EL + AA
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA 238
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 92 IIEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 147
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 148 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 206 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 85 ITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 140
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + +++ A + APE + Y + + D +AFGV
Sbjct: 141 LVGENHLVKVADFGLSRLMTGD--TFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 198
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 199 LLWEIATYGMSPYP------------------GIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 88 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 143
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 144 LVGENHLVKVADFGLSRLMTGD--TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 201
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 202 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 243
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 244 ELMRACWQWNPSDRPSFAEI 263
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 35/261 (13%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+D+++ N
Sbjct: 85 ITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 140
Query: 451 LLDKNLRAKLANFSFVRSAVRE-ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
L+ +N K+A+F R + + ++ K + + APE + Y + + D +AFG
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFG 197
Query: 510 VVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHL 568
V+L E+ T + Y G +++ L++ + + + E +
Sbjct: 198 VLLWEIATYGMSPYP------------------GIDPSQVYELLEKDYRMERPEGCPEKV 239
Query: 569 IMLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 92 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 147
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 148 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 206 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 346 INGSTVAIKCMRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+N VAIK +R +E ++ K++H L+ L+G C LV EFME+G
Sbjct: 30 LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
LSD+L +R + + LDV G+ YL +H+D+++ N L+ +N K
Sbjct: 90 LSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIK 144
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F R + ++ Y+S+ + +PE + + + D ++FGV++ E+ +
Sbjct: 145 VSDFGMTRFVLDDQ--YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 202
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
+ Y+ +E V + G L P L + H+ + C
Sbjct: 203 KIPYENRSN----SEVVEDISTGFR-------LYKPRLAST------HVYQIMNHCWRER 245
Query: 580 PESRPSMAEVVSTLMKI 596
PE RP+ + ++ L +I
Sbjct: 246 PEDRPAFSRLLRQLAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 89 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 144
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 145 LVGENHLVKVADFGLSRLMTGD--TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 202
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 203 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 170
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 171 TARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 229
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 230 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 272
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 273 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 172
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 173 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 231
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 232 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 274
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 275 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y +T +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARD-INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
G VA+K M R + EV +++ +H N+++++ + ++V EF+E G+
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 400 LSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + H + E ++ C L V L YLHN G +H+DI S +ILL + R
Sbjct: 129 LTDIVTHTRMNEEQIATVC-----LSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRI 180
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F +E K VGT +MAPE + E+D ++ G++++E+I G
Sbjct: 181 KLSDFGFCAQVSKE---VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 519 KEAAYKQ 525
+ + +
Sbjct: 238 EPPYFNE 244
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 87 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 142
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 143 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 201 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 91 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 146
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 147 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 204
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 205 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 246
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 247 ELMRACWQWNPSDRPSFAEI 266
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 45/269 (16%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ N T VA+K M+ + E N++K + H L+ L + + Y++
Sbjct: 29 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YII 87
Query: 392 YEFMENGSLSDWLH-----KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
EFM GSL D+L K+ P+ + ++ + +A G+ ++ Y+H+D+
Sbjct: 88 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRN---YIHRDLR 138
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +L K+A+F R V E++ Y++ + A + APE + +G T + D +
Sbjct: 139 AANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 507 AFGVVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+FG++L+E++T Y + E I E + M N
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC------------------- 237
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
L + + C PE RP+ + S L
Sbjct: 238 PEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 92 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 147
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 148 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 205
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 206 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 175
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 176 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 234
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 235 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 277
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 278 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISKE--------VNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++E + ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 87 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 142
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 143 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 200
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 201 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 133 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 187
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 248 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 290
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 291 NRPKFEQIVSILDKL 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 106 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 160
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 221 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 263
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 264 NRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 123 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 177
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 238 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 280
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 281 NRPKFEQIVSILDKL 295
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L +R P E +S A VA G+ YL C +H+D
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 175
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + +T + +MAPE + + T + D
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVK-WMAPEALFDRIYTHQSD 234
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 277
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 40/274 (14%)
Query: 339 GSVFRGIINGST------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACEH 384
G V++G++ S+ VAIK ++ ++ E ++ + +H N+I L G
Sbjct: 58 GEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK 117
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
++ E+MENG+L +L +K EF + +A G+ YL N YVH+D
Sbjct: 118 YKPMMIITEYMENGALDKFLREKD-GEFSVLQL-VGMLRGIAAGMKYLANMN---YVHRD 172
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVRE-ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
+++ NIL++ NL K+++F R + E+ Y+++ + + APE + Y T
Sbjct: 173 LAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR-WTAPEAISYRKFTSAS 231
Query: 504 DTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKK 562
D ++FG+V+ E++T G+ ++ E++ A N +L +D
Sbjct: 232 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---------NDGFRLPTPMD-------- 274
Query: 563 EIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L + C +E RP A++VS L K+
Sbjct: 275 -CPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 99
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 100 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 155
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 156 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 213
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 214 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 255
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 256 ELMRACWQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 89 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 144
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 145 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 202
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 203 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 89 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 144
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 145 LVGENHLVKVADFGLSRLMTGD--TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 202
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 203 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 40/256 (15%)
Query: 351 VAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIK + RR E +++ + +H N+I L G + +V E+MENGSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 403 WL--HKKRYP--EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
+L H ++ + V + V G+ YL +D GYVH+D+++ N+L+D NL
Sbjct: 140 FLRTHDGQFTIMQLVG------MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVC 190
Query: 459 KLANFSFVRSAVRE-ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+++F R + ++ Y++T + + APE + + + D ++FGVV+ E++
Sbjct: 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIR-WTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
Query: 518 GKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIA 577
E Y + + + S+ EG A + H L L L C
Sbjct: 250 YGERPYWN----MTNRDVISSVEEGYRLPAPMGC-------------PHALHQLMLDCWH 292
Query: 578 REPESRPSMAEVVSTL 593
++ RP +++VS L
Sbjct: 293 KDRAQRPRFSQIVSVL 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 45/269 (16%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ N T VA+K M+ + E N++K + H L+ L + + Y++
Sbjct: 202 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YII 260
Query: 392 YEFMENGSLSDWLH-----KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
EFM GSL D+L K+ P+ + ++ + +A G+ ++ Y+H+D+
Sbjct: 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRN---YIHRDLR 311
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +L K+A+F R V E++ Y++ + A + APE + +G T + D +
Sbjct: 312 AANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 507 AFGVVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+FG++L+E++T Y + E I E + M N
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC------------------- 410
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
L + + C PE RP+ + S L
Sbjct: 411 PEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + +T + +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + +T + +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N ++A+F R + Y T +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMRIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E VS +A ++ + YL ++H+++++ N
Sbjct: 294 ITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNC 349
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 350 LVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 407
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 408 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 449
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 450 ELMRACWQWNPSDRPSFAEI 469
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 35/261 (13%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 92 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 147
Query: 451 LLDKNLRAKLANFSFVRSAVRE-ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
L+ +N K+A+F R + + ++ K + + APE + Y + + D +AFG
Sbjct: 148 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFG 204
Query: 510 VVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHL 568
V+L E+ T + Y G +++ L++ + + + E +
Sbjct: 205 VLLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKV 246
Query: 569 IMLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 38/255 (14%)
Query: 351 VAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIK + RR E +++ + +H N+I L G + +V E+MENGSL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 403 WL--HKKRYP--EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
+L H ++ + V + V G+ YL +D GYVH+D+++ N+L+D NL
Sbjct: 140 FLRTHDGQFTIMQLVG------MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVC 190
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K+++F R + +T + APE + + + D ++FGVV+ E++
Sbjct: 191 KVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
E Y + + + S+ EG A + H L L L C +
Sbjct: 251 GERPYWN----MTNRDVISSVEEGYRLPAPMGC-------------PHALHQLMLDCWHK 293
Query: 579 EPESRPSMAEVVSTL 593
+ RP +++VS L
Sbjct: 294 DRAQRPRFSQIVSVL 308
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 19/187 (10%)
Query: 340 SVFRGIINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
S+ G G T I+ + +EV ++ +NH N++ L+G + +V EF+ G
Sbjct: 51 SLILGDSEGETEMIEKFQE-FQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGD 107
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL---LDKN- 455
L L K +P + W+ + R+ LD+A G+ Y+ N +P VH+D+ S NI LD+N
Sbjct: 108 LYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENA 164
Query: 456 -LRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM--EYGLVTPEMDTYAFGVVL 512
+ AK+A+FS + +V SG +G +MAPE + E T + DTY+F ++L
Sbjct: 165 PVCAKVADFSLSQQSVHSVSGL------LGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 513 LELITGK 519
++TG+
Sbjct: 219 YTILTGE 225
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 35/261 (13%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 88 IIEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 143
Query: 451 LLDKNLRAKLANFSFVRSAVRE-ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
L+ +N K+A+F R + + ++ K + + APE + Y + + D +AFG
Sbjct: 144 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKSDVWAFG 200
Query: 510 VVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHL 568
V+L E+ T + Y G +++ L++ + + + E +
Sbjct: 201 VLLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKV 242
Query: 569 IMLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 243 YELMRACWQWNPSDRPSFAEI 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E+MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D G+VH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 42/241 (17%)
Query: 310 SNLDRGLKFYKYEDLVVATENFS-----------PKNMID-----GSVFRGII------- 346
S +D G + ++ VV E F P+ ++D G GI+
Sbjct: 9 SGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKH 68
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+G VA+K M R + EV +++ HFN++ ++ + +++ EF++ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 400 LSDWLHKKRY-PEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + + R E ++ C V L YLH G +H+DI S +ILL + R
Sbjct: 129 LTDIVSQVRLNEEQIATVCE-----AVLQALAYLHA---QGVIHRDIKSDSILLTLDGRV 180
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F ++ K VGT +MAPE + L E+D ++ G++++E++ G
Sbjct: 181 KLSDFGFCAQISKD---VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
Query: 519 K 519
+
Sbjct: 238 E 238
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 47/272 (17%)
Query: 349 STVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGS 399
+ VA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ E+ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 400 LSDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
L ++L + P E +S A VA G+ YL C +H+D
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-----IHRD 175
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ ++ K+A+F R + Y T +MAPE + + T + D
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ T + Y + E +F +++ G+ K S
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPG-----VPVEELFKLLKEGHRMDKPS------------NC 277
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E MENGSL
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D GYVH+D+++ NIL++ NL K++
Sbjct: 106 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 160
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 221 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 263
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 264 NRPKFEQIVSILDKL 278
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+G VA+K M R + EV +++ H N++ ++ + ++V EF+E G+
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 400 LSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + H + E ++ C L V L LH G +H+DI S +ILL + R
Sbjct: 113 LTDIVTHTRMNEEQIAAVC-----LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRV 164
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F +E K VGT +MAPE + PE+D ++ G++++E++ G
Sbjct: 165 KLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
Query: 519 KEAAYKQ 525
+ + +
Sbjct: 222 EPPYFNE 228
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+G VA+K M R + EV +++ H N++ ++ + ++V EF+E G+
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 400 LSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + H + E ++ C L V L LH G +H+DI S +ILL + R
Sbjct: 235 LTDIVTHTRMNEEQIAAVC-----LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRV 286
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F +E K VGT +MAPE + PE+D ++ G++++E++ G
Sbjct: 287 KLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
Query: 519 KEAAYKQ 525
+ + +
Sbjct: 344 EPPYFNE 350
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K ++ ++ EV +L+K H N++ G D +
Sbjct: 50 GTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-A 107
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+V ++ E SL LH + +F + IA A G+ YLH +H+D+ S N
Sbjct: 108 IVTQWCEGSSLYKHLHVQE-TKFQMFQL-IDIARQTAQGMDYLHA---KNIIHRDMKSNN 162
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMDTY 506
I L + L K+ +F R SG + G+ +MAPE + P + D Y
Sbjct: 163 IFLHEGLTVKIGDFGLATVKSRW-SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVY 221
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
++G+VL EL+TG E Y I + + MV G A LS L +A K+ +A
Sbjct: 222 SYGIVLYELMTG-ELPY----SHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVAD 276
Query: 567 HLIMLCLACIAREPESRPSMAEVVSTLMKIQ 597
C+ + E RP +++S++ +Q
Sbjct: 277 --------CVKKVKEERPLFPQILSSIELLQ 299
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+I+L GAC DG Y++ E+ G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+G VA+K M R + EV +++ H N++ ++ + ++V EF+E G+
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 400 LSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + H + E ++ C L V L LH G +H+DI S +ILL + R
Sbjct: 115 LTDIVTHTRMNEEQIAAVC-----LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRV 166
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F +E K VGT +MAPE + PE+D ++ G++++E++ G
Sbjct: 167 KLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
Query: 519 KEAAYKQ 525
+ + +
Sbjct: 224 EPPYFNE 230
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+I L GAC DG Y++ E+ G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ + G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+G VA+K M R + EV +++ H N++ ++ + ++V EF+E G+
Sbjct: 44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103
Query: 400 LSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + H + E ++ C L V L LH G +H+DI S +ILL + R
Sbjct: 104 LTDIVTHTRMNEEQIAAVC-----LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRV 155
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F +E K VGT +MAPE + PE+D ++ G++++E++ G
Sbjct: 156 KLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
Query: 519 KEAAYKQ 525
+ + +
Sbjct: 213 EPPYFNE 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+G VA+K M R + EV +++ H N++ ++ + ++V EF+E G+
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 107
Query: 400 LSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + H + E ++ C L V L LH G +H+DI S +ILL + R
Sbjct: 108 LTDIVTHTRMNEEQIAAVC-----LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRV 159
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F +E K VGT +MAPE + PE+D ++ G++++E++ G
Sbjct: 160 KLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
Query: 519 KEAAYKQ 525
+ + +
Sbjct: 217 EPPYFNE 223
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 32/256 (12%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
VAIK + RR E +++ + +H N+++L G +V EFMENG+L
Sbjct: 73 AVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALD 132
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL D GYVH+D+++ NIL++ NL K++
Sbjct: 133 AFL-RKHDGQFTVIQL-VGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 462 NFSFVRSAVRE-ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
+F R + E+ Y++T + + APE ++Y T D +++G+V+ E+++ E
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKIPVR-WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 246
Query: 521 AAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREP 580
Y + + V +E G +L +D L L L C +E
Sbjct: 247 RPYWD-----MSNQDVIKAIEEGY---RLPAPMD---------CPAGLHQLMLDCWQKER 289
Query: 581 ESRPSMAEVVSTLMKI 596
RP ++V L K+
Sbjct: 290 AERPKFEQIVGILDKM 305
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 347 NGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+G VA+K M R + EV +++ H N++ ++ + ++V EF+E G+
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 400 LSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
L+D + H + E ++ C L V L LH G +H+DI S +ILL + R
Sbjct: 158 LTDIVTHTRMNEEQIAAVC-----LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRV 209
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
KL++F F +E K VGT +MAPE + PE+D ++ G++++E++ G
Sbjct: 210 KLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
Query: 519 KEAAYKQ 525
+ + +
Sbjct: 267 EPPYFNE 273
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 350 TVAIKCMRRSISK--------EVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K ++ ++ E+ ++K I H N+INL GAC DG Y++ + G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 401 SDWLHKKRYP-------------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
++L +R P E +++ +A G+ YL C +H+D+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-----IHRDL 183
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N+L+ +N K+A+F R + Y T +MAPE + + T + D
Sbjct: 184 AARNVLVTENNVMKIADFGLARD-INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV++ E+ T + Y + E +F +++ G+ K AN
Sbjct: 243 WSFGVLMWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK---------PAN---CT 285
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L M+ C P RP+ ++V L +I
Sbjct: 286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 19/187 (10%)
Query: 340 SVFRGIINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
S+ G G T I+ + +EV ++ +NH N++ L+G + +V EF+ G
Sbjct: 51 SLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGD 107
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL---LDKN- 455
L L K +P + W+ + R+ LD+A G+ Y+ N +P VH+D+ S NI LD+N
Sbjct: 108 LYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENA 164
Query: 456 -LRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM--EYGLVTPEMDTYAFGVVL 512
+ AK+A+F + +V SG +G +MAPE + E T + DTY+F ++L
Sbjct: 165 PVCAKVADFGLSQQSVHSVSGL------LGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 513 LELITGK 519
++TG+
Sbjct: 219 YTILTGE 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 290
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+++++ N
Sbjct: 291 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNC 346
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 347 LVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 404
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 405 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 446
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 447 ELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 273 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 332
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+ EFM G+L D+L + E V+ +A ++ + YL ++H+++++ N
Sbjct: 333 ITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNC 388
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 389 LVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGV 446
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHHLI 569
+L E+ T + Y G +++ L++ + + + E +
Sbjct: 447 LLWEIATYGMSPYP------------------GIDLSQVYELLEKDYRMERPEGCPEKVY 488
Query: 570 MLCLACIAREPESRPSMAEV 589
L AC P RPS AE+
Sbjct: 489 ELMRACWQWNPSDRPSFAEI 508
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 34/246 (13%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
RR E +++ + +H N+I+L G ++ E+MENGSL +L K +
Sbjct: 53 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--------D 104
Query: 417 CRFRIA------LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
RF + + G+ YL +D YVH+D+++ NIL++ NL K+++F R
Sbjct: 105 GRFTVIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 161
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
+ +T+ + APE + Y T D +++G+V+ E+++ E Y
Sbjct: 162 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD----- 216
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ + V +E G + P + IA H +M L C +E RP ++V
Sbjct: 217 MSNQDVIKAIEEG-------YRLPPPMDC---PIALHQLM--LDCWQKERSDRPKFGQIV 264
Query: 591 STLMKI 596
+ L K+
Sbjct: 265 NMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 34/246 (13%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
RR E +++ + +H N+I+L G ++ E+MENGSL +L K +
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--------D 110
Query: 417 CRFRIA------LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
RF + + G+ YL +D YVH+D+++ NIL++ NL K+++F R
Sbjct: 111 GRFTVIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 167
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
+ +T+ + APE + Y T D +++G+V+ E+++ E Y
Sbjct: 168 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD----- 222
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ + V +E G + P + IA H +M L C +E RP ++V
Sbjct: 223 MSNQDVIKAIEEG-------YRLPPPMDC---PIALHQLM--LDCWQKERSDRPKFGQIV 270
Query: 591 STLMKI 596
+ L K+
Sbjct: 271 NMLDKL 276
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 19/187 (10%)
Query: 340 SVFRGIINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
S+ G G T I+ + +EV ++ +NH N++ L+G + +V EF+ G
Sbjct: 51 SLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGD 107
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL---LDKN- 455
L L K +P + W+ + R+ LD+A G+ Y+ N +P VH+D+ S NI LD+N
Sbjct: 108 LYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENA 164
Query: 456 -LRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM--EYGLVTPEMDTYAFGVVL 512
+ AK+A+F + +V SG +G +MAPE + E T + DTY+F ++L
Sbjct: 165 PVCAKVADFGTSQQSVHSVSGL------LGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 513 LELITGK 519
++TG+
Sbjct: 219 YTILTGE 225
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 31/258 (12%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSIS------KEVNLLKKINHFNLINLFGACEHDGVFYL 390
G V+ G+ TVA+K ++ KE ++K+I H NL+ L G C + FY+
Sbjct: 46 GEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYI 105
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V E+M G+L D+L + E V+ +A ++ + YL ++H+D+++ N
Sbjct: 106 VTEYMPYGNLLDYLRECNREE-VTAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC 161
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
L+ +N K+A+F R + Y++ A + APE + Y + + D +AFGV
Sbjct: 162 LVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGV 219
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIM 570
+L E+ T + Y I L++ V+ ++E G + P K +
Sbjct: 220 LLWEIATYGMSPYPG----IDLSQ-VYDLLEKGYR------MEQPEGCPPK------VYE 262
Query: 571 LCLACIAREPESRPSMAE 588
L AC P RPS AE
Sbjct: 263 LMRACWKWSPADRPSFAE 280
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 34/257 (13%)
Query: 351 VAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIK + RR E +++ + +H N+I+L G ++ EFMENGSL
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 403 WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLAN 462
+L ++ +F + +A G+ YL D YVH+D+++ NIL++ NL K+++
Sbjct: 124 FL-RQNDGQFTVIQL-VGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSD 178
Query: 463 FSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
F R + +++ + +A+G + APE ++Y T D +++G+V+ E+++
Sbjct: 179 FGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
E Y + + V + +E + +L +D L L L C ++
Sbjct: 238 ERPYWD-----MTNQDVINAIE---QDYRLPPPMD---------CPSALHQLMLDCWQKD 280
Query: 580 PESRPSMAEVVSTLMKI 596
RP ++V+TL K+
Sbjct: 281 RNHRPKFGQIVNTLDKM 297
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 30/264 (11%)
Query: 339 GSVFRGIINGSTVAIKCM-----RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
G V + VAIK + R++ E+ L ++NH N++ L+GAC + LV E
Sbjct: 23 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVME 80
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL- 452
+ E GSL + LH + + L + G+ YLH+ +H+D+ N+LL
Sbjct: 81 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 140
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
K+ +F +A ++ ++ K G+ +MAPE E + + D +++G++L
Sbjct: 141 AGGTVLKICDFG---TACDIQTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGIIL 194
Query: 513 LELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLC 572
E+IT ++ + G + AV + P L N + L+ C
Sbjct: 195 WEVITRRKPFDEIGGPAFRIMWAVHNGTR-------------PPLIKNLPKPIESLMTRC 241
Query: 573 LACIAREPESRPSMAEVVSTLMKI 596
+++P RPSM E+V + +
Sbjct: 242 W---SKDPSQRPSMEEIVKIMTHL 262
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 30/255 (11%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLS 401
+VAIK + RR E +++ + +H N+I L G +V E MENGSL
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 402 DWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+L +K +F + +A G+ YL +D G VH+D+++ NIL++ NL K++
Sbjct: 135 SFL-RKHDAQFTVIQL-VGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVS 189
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
+F R + +T+ + +PE + Y T D +++G+VL E+++ E
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y + + + V V+ G + P + + L L L C ++
Sbjct: 250 PYWE-----MSNQDVIKAVDEG-------YRLPPPM-----DCPAALYQLMLDCWQKDRN 292
Query: 582 SRPSMAEVVSTLMKI 596
+RP ++VS L K+
Sbjct: 293 NRPKFEQIVSILDKL 307
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 30/264 (11%)
Query: 339 GSVFRGIINGSTVAIKCM-----RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
G V + VAIK + R++ E+ L ++NH N++ L+GAC + LV E
Sbjct: 22 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVME 79
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL- 452
+ E GSL + LH + + L + G+ YLH+ +H+D+ N+LL
Sbjct: 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 139
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
K+ +F +A ++ ++ K G+ +MAPE E + + D +++G++L
Sbjct: 140 AGGTVLKICDFG---TACDIQTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGIIL 193
Query: 513 LELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLC 572
E+IT ++ + G + AV + P L N + L+ C
Sbjct: 194 WEVITRRKPFDEIGGPAFRIMWAVHNGTR-------------PPLIKNLPKPIESLMTRC 240
Query: 573 LACIAREPESRPSMAEVVSTLMKI 596
+++P RPSM E+V + +
Sbjct: 241 W---SKDPSQRPSMEEIVKIMTHL 261
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VA+K + ++ + +EV ++K +NH N++ LF E + YLV E
Sbjct: 27 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 86
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + + +FR + + Y C VH+D+ + N+LLD
Sbjct: 87 YASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQY---CHQKFIVHRDLKAENLLLD 140
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + + T G+ Y APE + PE+D ++ GV+L
Sbjct: 141 ADMNIKIADFGF----SNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
Query: 513 LELITG 518
L++G
Sbjct: 197 YTLVSG 202
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
RR E +++ + +H N+I+L G ++ E+MENGSL +L K +
Sbjct: 74 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--------D 125
Query: 417 CRFRIA------LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
RF + + G+ YL +D VH+D+++ NIL++ NL K+++F R
Sbjct: 126 GRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
+ +T+ + APE + Y T D +++G+V+ E+++ E Y
Sbjct: 183 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD----- 237
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ + V +E G + P + IA H +M L C +E RP ++V
Sbjct: 238 MSNQDVIKAIEEG-------YRLPPPMDC---PIALHQLM--LDCWQKERSDRPKFGQIV 285
Query: 591 STLMKI 596
+ L K+
Sbjct: 286 NMLDKL 291
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 36/255 (14%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK--KRYPEFVS 414
+R+ KEV +++ + H N++ G D + E+++ G+L + +YP
Sbjct: 51 QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---- 106
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
W+ R A D+A G+ YLH+ +H+D++S N L+ +N +A+F R V E++
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 475 ---GYSSTK--------TAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAY 523
G S K T VG +MAPE + ++D ++FG+VL E+I
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG------ 217
Query: 524 KQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESR 583
+ + + L +M G N L PN + + + C +PE R
Sbjct: 218 RVNADPDYLPR---TMDFGLNVRGFLDRYCPPNCPPS-------FFPITVRCCDLDPEKR 267
Query: 584 PSMAEVVSTLMKIQL 598
PS ++ L +++
Sbjct: 268 PSFVKLEHWLETLRM 282
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 34/210 (16%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKK--INHFNLINLFGACEHDGV----- 387
G V++ + VA+K ++S E + + H NL+ F A E G
Sbjct: 29 GCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQ-FIAAEKRGSNLEVE 87
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHN----CTDPGY--- 440
+L+ F + GSL+D+L ++WN +A ++ GL YLH C G+
Sbjct: 88 LWLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 441 -VHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY--SSTKTAVGTNGYMAPEYMEYG 497
H+D S N+LL +L A LA+F AVR E G T VGT YMAPE +E
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGL---AVRFEPGKPPGDTHGQVGTRRYMAPEVLEGA 200
Query: 498 L-----VTPEMDTYAFGVVLLELITGKEAA 522
+ +D YA G+VL EL++ +AA
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAA 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 43/256 (16%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH----------K 406
R+ +E LL + H +++ +G C +V+E+M++G L+ +L +
Sbjct: 59 RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAE 118
Query: 407 KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFV 466
P ++ + IA +A G+ YL +VH+D+++ N L+ +NL K+ +F
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 467 RSAVREESGYSSTKTAVGTNG-----YMAPEYMEYGLVTPEMDTYAFGVVLLELIT-GKE 520
R YS+ VG + +M PE + Y T E D ++ GVVL E+ T GK+
Sbjct: 176 RDV------YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
Query: 521 AAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREP 580
Y+ E+ + + +G VL P + + L L C REP
Sbjct: 230 PWYQLSNNEV-----IECITQG-------RVLQRP------RTCPQEVYELMLGCWQREP 271
Query: 581 ESRPSMAEVVSTLMKI 596
R ++ + + L +
Sbjct: 272 HMRKNIKGIHTLLQNL 287
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VA+K + ++ + +EV ++K +NH N++ LF E + YLV E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQY---CHQKFIVHRDLKAENLLLD 147
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + + T G+ Y APE + PE+D ++ GV+L
Sbjct: 148 ADMNIKIADFGF----SNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 513 LELITG 518
L++G
Sbjct: 204 YTLVSG 209
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VAIK + ++ + +EV ++K +NH N++ LF E + YL+ E
Sbjct: 32 RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 91
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 92 YASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQY---CHQKRIVHRDLKAENLLLD 145
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + T G+ Y APE + PE+D ++ GV+L
Sbjct: 146 ADMNIKIADFGF----SNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 513 LELITG 518
L++G
Sbjct: 202 YTLVSG 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VA+K + ++ + +EV ++K +NH N++ LF E + YLV E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQY---CHQKFIVHRDLKAENLLLD 147
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + + T G+ Y APE + PE+D ++ GV+L
Sbjct: 148 ADMNIKIADFGF----SNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 513 LELITG 518
L++G
Sbjct: 204 YTLVSG 209
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 22/214 (10%)
Query: 347 NGSTVAIKCMRRSISK---------EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+G A+K ++++ K E ++L +NH ++ L A + +G YL+ +F+
Sbjct: 55 SGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRG 114
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
G L L K+ F + +F +A ++A GL +LH+ G +++D+ NILLD+
Sbjct: 115 GDLFTRLSKEVM--FTEEDVKFYLA-ELALGLDHLHSL---GIIYRDLKPENILLDEEGH 168
Query: 458 AKLANFSFVRSAV-REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
KL +F + A+ E+ YS GT YMAPE + + D +++GV++ E++
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYS----FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEML 224
Query: 517 TGKEAAYKQDGEE--ILLAEAVFSMVEGGNAEAK 548
TG +D +E L+ +A M + + EA+
Sbjct: 225 TGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQ 258
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VA++ + ++ + +EV ++K +NH N++ LF E + YLV E
Sbjct: 34 RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQY---CHQKFIVHRDLKAENLLLD 147
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + + T G+ Y APE + PE+D ++ GV+L
Sbjct: 148 ADMNIKIADFGF----SNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 513 LELITG 518
L++G
Sbjct: 204 YTLVSG 209
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 46/256 (17%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL--HKKRYPEFVS 414
R+ +E LL + H +++ +G C +V+E+M++G L+ +L H V
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 415 WNCR-----------FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
R IA +A G+ YL +VH+D+++ N L+ NL K+ +F
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDF 177
Query: 464 SFVRSAVREESGYSSTKTAVGTNG-----YMAPEYMEYGLVTPEMDTYAFGVVLLELIT- 517
R YS+ VG + +M PE + Y T E D ++FGV+L E+ T
Sbjct: 178 GMSRDV------YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTY 231
Query: 518 GKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIA 577
GK+ ++ E+ + + +G VL P + KE+ + L C
Sbjct: 232 GKQPWFQLSNTEV-----IECITQG-------RVLERPRV--CPKEVYD----VMLGCWQ 273
Query: 578 REPESRPSMAEVVSTL 593
REP+ R ++ E+ L
Sbjct: 274 REPQQRLNIKEIYKIL 289
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R ++ G VA+K + ++ + +EV ++K +NH N++ LF E + YLV E
Sbjct: 35 RHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVME 94
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 95 YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQY---CHQKYIVHRDLKAENLLLD 148
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + + T G+ Y APE + PE+D ++ GV+L
Sbjct: 149 GDMNIKIADFGF----SNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 513 LELITG 518
L++G
Sbjct: 205 YTLVSG 210
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 39 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 99 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 157
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 158 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 213
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y+ G + E L +++
Sbjct: 214 DGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----------------GLSNEQVLRFVMEG 256
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 257 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 24 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 83
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 84 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 142
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + K + +M+PE ++
Sbjct: 143 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMSPESLK 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 199 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 241
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L+ L C P+ RPS E++S++
Sbjct: 242 GLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 36/258 (13%)
Query: 351 VAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIK + RR E +++ + +H N+I+L G ++ EFMENGSL
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 403 WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLAN 462
+L ++ +F + +A G+ YL D YVH+ +++ NIL++ NL K+++
Sbjct: 98 FL-RQNDGQFTVIQL-VGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSD 152
Query: 463 FSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
F R + +++ + +A+G + APE ++Y T D +++G+V+ E+++
Sbjct: 153 FGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVD-PNLQANKKEIAHHLIMLCLACIAR 578
E Y + + V + +E + +L +D P+ A H +ML C +
Sbjct: 212 ERPYWD-----MTNQDVINAIE---QDYRLPPPMDCPS--------ALHQLML--DCWQK 253
Query: 579 EPESRPSMAEVVSTLMKI 596
+ RP ++V+TL K+
Sbjct: 254 DRNHRPKFGQIVNTLDKM 271
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH------ 405
A + R+ +E LL + H +++ FG C +V+E+M +G L+ +L
Sbjct: 53 ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 112
Query: 406 ------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
+ P + +A VA G+ YL +VH+D+++ N L+ + L K
Sbjct: 113 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVK 169
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F R + +T + +M PE + Y T E D ++FGVVL E+ T G
Sbjct: 170 IGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYG 228
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
K+ Y+ EA+ + +G E + P + A + C R
Sbjct: 229 KQPWYQLSN-----TEAIDCITQGRELERPRA--CPPEVYAIMR-----------GCWQR 270
Query: 579 EPESRPSMAEVVSTLMKI 596
EP+ R S+ +V + L +
Sbjct: 271 EPQQRHSIKDVHARLQAL 288
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 30 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 89
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 90 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 148
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 149 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 204
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 205 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 247
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 248 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 32 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 91
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 92 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 150
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 151 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 206
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 207 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 249
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 250 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH------ 405
A + R+ +E LL + H +++ FG C +V+E+M +G L+ +L
Sbjct: 59 ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 118
Query: 406 ------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
+ P + +A VA G+ YL +VH+D+++ N L+ + L K
Sbjct: 119 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVK 175
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F R + +T + +M PE + Y T E D ++FGVVL E+ T G
Sbjct: 176 IGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYG 234
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
K+ Y+ EA+ + +G E + P + A + C R
Sbjct: 235 KQPWYQLSN-----TEAIDCITQGRELERPRA--CPPEVYAIMR-----------GCWQR 276
Query: 579 EPESRPSMAEVVSTLMKI 596
EP+ R S+ +V + L +
Sbjct: 277 EPQQRHSIKDVHARLQAL 294
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH------ 405
A + R+ +E LL + H +++ FG C +V+E+M +G L+ +L
Sbjct: 82 ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 141
Query: 406 ------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
+ P + +A VA G+ YL +VH+D+++ N L+ + L K
Sbjct: 142 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVK 198
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F R + +T + +M PE + Y T E D ++FGVVL E+ T G
Sbjct: 199 IGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYG 257
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
K+ Y+ EA+ + +G E + P + A + C R
Sbjct: 258 KQPWYQLSN-----TEAIDCITQGRELERPRA--CPPEVYAIMR-----------GCWQR 299
Query: 579 EPESRPSMAEVVSTLMKI 596
EP+ R S+ +V + L +
Sbjct: 300 EPQQRHSIKDVHARLQAL 317
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 26 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 85
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 86 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 144
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 145 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 200
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 201 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 243
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 244 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 32 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 91
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 92 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 150
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 151 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 206
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 207 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 249
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 250 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 33 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 92
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 93 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 151
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 152 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 207
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 208 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 250
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 251 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 55/269 (20%)
Query: 339 GSVFRGIINGST-VAIKCMR------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V+ N T VA+K M+ + E N++K + H L+ L + + Y++
Sbjct: 196 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YII 254
Query: 392 YEFMENGSLSDWLH-----KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
EFM GSL D+L K+ P+ + ++ + +A G+ ++ Y+H+D+
Sbjct: 255 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRN---YIHRDLR 305
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+ NIL+ +L K+A+F R + ++ APE + +G T + D +
Sbjct: 306 AANILVSASLVCKIADFGLARVGAKFPIKWT------------APEAINFGSFTIKSDVW 353
Query: 507 AFGVVLLELITGKEAAYK--QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+FG++L+E++T Y + E I E + M N
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC------------------- 394
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
L + + C PE RP+ + S L
Sbjct: 395 PEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 61 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 120
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 121 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 179
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 180 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 235
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 236 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 278
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 279 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
++ +T+ ++ R+ E ++L ++NH ++ L A + +G YL+ +F+ G L L
Sbjct: 59 VLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL 117
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
K+ F + +F +A ++A L +LH+ G +++D+ NILLD+ KL +F
Sbjct: 118 SKEVM--FTEEDVKFYLA-ELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 465 FVRSAV-REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAY 523
+ ++ E+ YS GT YMAPE + T D ++FGV++ E++TG
Sbjct: 172 LSKESIDHEKKAYS----FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
Query: 524 KQDGEEIL 531
+D +E +
Sbjct: 228 GKDRKETM 235
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 33 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 92
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 93 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 151
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + K + +M+PE ++
Sbjct: 152 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMSPESLK 207
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 208 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 250
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 251 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 26 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 85
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEF--------VSWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R PE S + ++A ++A G+ YL+
Sbjct: 86 QGQPTLVIMELMTRGDLKSYLRSLR-PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN 144
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N + ++ K+ +F R + E Y + +M+PE ++
Sbjct: 145 K---FVHRDLAARNCXVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 200
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 201 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 243
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L+ L C P+ RPS E++S++
Sbjct: 244 GLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 19/197 (9%)
Query: 349 STVAIKCMRRSISKEVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK 407
S ++ +R + KEV++L+K++ H N+I L E + F+LV++ M+ G L D+L +K
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 408 RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVR 467
R L+V LH L+ VH+D+ NILLD ++ KL +F F
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF-- 170
Query: 468 SAVREESGYSSTKTAVGTNGYMAPEYMEYGL------VTPEMDTYAFGVVLLELITGKEA 521
+ + + G ++ GT Y+APE +E + E+D ++ GV++ L+ G
Sbjct: 171 -SCQLDPG-EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 522 AYKQDGEEILLAEAVFS 538
+ + +++L+ + S
Sbjct: 229 FWHR--KQMLMLRMIMS 243
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VAIK + ++ + +EV ++K +NH N++ LF E + YL+ E
Sbjct: 35 RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 95 YASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQY---CHQKRIVHRDLKAENLLLD 148
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + G Y APE + PE+D ++ GV+L
Sbjct: 149 ADMNIKIADFGF----SNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 513 LELITG 518
L++G
Sbjct: 205 YTLVSG 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VA+K + ++ + +EV ++K +NH N++ LF E + YLV E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQY---CHQKFIVHRDLKAENLLLD 147
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAV-GTNGYMAPEYME-YGLVTPEMDTYAFGVV 511
++ K+A+F F E + + A G Y APE + PE+D ++ GV+
Sbjct: 148 ADMNIKIADFGF-----SNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 512 LLELITG 518
L L++G
Sbjct: 203 LYTLVSG 209
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
++ +T+ ++ R+ E ++L ++NH ++ L A + +G YL+ +F+ G L L
Sbjct: 59 VLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL 117
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
K+ F + +F +A ++A L +LH+ G +++D+ NILLD+ KL +F
Sbjct: 118 SKEVM--FTEEDVKFYLA-ELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 465 FVRSAV-REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAY 523
+ ++ E+ YS GT YMAPE + T D ++FGV++ E++TG
Sbjct: 172 LSKESIDHEKKAYS----FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
Query: 524 KQDGEEIL 531
+D +E +
Sbjct: 228 GKDRKETM 235
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
++ +T+ ++ R+ E ++L ++NH ++ L A + +G YL+ +F+ G L L
Sbjct: 60 VLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL 118
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
K+ F + +F +A ++A L +LH+ G +++D+ NILLD+ KL +F
Sbjct: 119 SKEVM--FTEEDVKFYLA-ELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFG 172
Query: 465 FVRSAV-REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAY 523
+ ++ E+ YS GT YMAPE + T D ++FGV++ E++TG
Sbjct: 173 LSKESIDHEKKAYS----FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
Query: 524 KQDGEEIL 531
+D +E +
Sbjct: 229 GKDRKETM 236
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 38/264 (14%)
Query: 357 RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYP----- 410
+ ++ E+ ++ + H N++NL GAC H G ++ E+ G L ++L +KR P
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYS 152
Query: 411 --------EFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDISSGNILLDKNLRAKL 460
E +S + VA G+ +L NC +H+D+++ N+LL AK+
Sbjct: 153 YNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKI 207
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
+F R + +S Y A +MAPE + + T + D +++G++L E+ +
Sbjct: 208 GDFGLARD-IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
Query: 521 AAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREP 580
Y IL+ + +V+ G A+ + ++ + AC A EP
Sbjct: 267 NPYPG----ILVNSKFYKLVKDGYQMAQPAF------------APKNIYSIMQACWALEP 310
Query: 581 ESRPSMAEVVSTLMKIQLDVQRSQ 604
RP+ ++ S L + + +R +
Sbjct: 311 THRPTFQQICSFLQEQAQEDRRER 334
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 349 STVAIKCMRRSISKEVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK 407
S ++ +R + KEV++L+K++ H N+I L E + F+LV++ M+ G L D+L +K
Sbjct: 46 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK 105
Query: 408 RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVR 467
R L+V LH L+ VH+D+ NILLD ++ KL +F F
Sbjct: 106 VTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF-- 157
Query: 468 SAVREESGYSSTKTAVGTNGYMAPEYMEYGL------VTPEMDTYAFGVVLLELITGKEA 521
+ + + G + GT Y+APE +E + E+D ++ GV++ L+ G
Sbjct: 158 -SCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
Query: 522 AYKQDGEEILLAEAVFS 538
+ + +++L+ + S
Sbjct: 216 FWHR--KQMLMLRMIMS 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 39 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEFV--------SWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R P S + ++A ++A G+ YL+
Sbjct: 99 QGQPTLVIMELMTRGDLKSYLRSLR-PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN 157
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 158 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 213
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 214 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 256
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 257 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 36/257 (14%)
Query: 354 KCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFV 413
K +++ +E+ LLK++ H NL+NL C+ +YLV+EF+++ L D + +P +
Sbjct: 65 KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL---ELFPNGL 121
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
+ + + +G+ + C +H+DI NIL+ ++ KL +F F R+
Sbjct: 122 DYQVVQKYLFQIINGIGF---CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178
Query: 474 SGYSSTKTAVGTNGYMAPEYM----EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEE 529
Y V T Y APE + +YG +D +A G ++ E+ G E + D +
Sbjct: 179 EVYDDE---VATRWYRAPELLVGDVKYG---KAVDVWAIGCLVTEMFMG-EPLFPGDSD- 230
Query: 530 ILLAEAVFSMVEGGNAEAKLSVLVDPN----------------LQANKKEIAHHLIMLCL 573
+ + M+ GN + L + N L+ +++ +I L
Sbjct: 231 --IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAK 288
Query: 574 ACIAREPESRPSMAEVV 590
C+ +P+ RP AE++
Sbjct: 289 KCLHIDPDKRPFCAELL 305
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 400 LSDWLHKKR---------YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
LS +L KR Y +F++ + VA G+ +L + +H+D+++ NI
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARNI 175
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
LL + K+ +F R + ++ Y A +MAPE + + T + D ++FGV
Sbjct: 176 LLSEKNVVKIXDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIM 570
+L E+ + + Y G +I E + EG A P+ + +
Sbjct: 235 LLWEIFSLGASPYP--GVKI-DEEFXRRLKEGTRMRA-------PDYTTPE------MYQ 278
Query: 571 LCLACIAREPESRPSMAEVVSTL 593
L C EP RP+ +E+V L
Sbjct: 279 TMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 120/294 (40%), Gaps = 50/294 (17%)
Query: 321 YEDLVVATENFSPKNMIDGSVFRGII--NGSTVAIKCMRRSIS--------KEVNLLKKI 370
+EDLV+ E N G VF G + + + VA+K R ++ +E +LK+
Sbjct: 113 HEDLVLG-EQIGRGNF--GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169
Query: 371 NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIAL------D 424
+H N++ L G C Y+V E ++ G +L + R R+ D
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE--------GARLRVKTLLQMVGD 221
Query: 425 VAHGLHYLHN-CTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAV 483
A G+ YL + C +H+D+++ N L+ + K+++F R S V
Sbjct: 222 AAAGMEYLESKCC----IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV 277
Query: 484 GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGG 543
+ APE + YG + E D ++FG++L E + + Y L + VE G
Sbjct: 278 PVK-WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN-----LSNQQTREFVEKG 331
Query: 544 NAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKIQ 597
L P L + + L C A EP RPS + + L I+
Sbjct: 332 GR------LPCPELCPDA------VFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 25/203 (12%)
Query: 351 VAIKCMRR--------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIKC+ + S+ E+ +L KI H N++ L E G YL+ + + G L D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 403 WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL---LDKNLRAK 459
+ +K F + R+ V + YLH D G VH+D+ N+L LD++ +
Sbjct: 106 RIVEKG---FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F + E+ G S TA GT GY+APE + + +D ++ GV+ L+ G
Sbjct: 160 ISDFGLSK---MEDPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 520 EAAYKQDG----EEILLAEAVFS 538
Y ++ E+IL AE F
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFD 238
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 45/278 (16%)
Query: 339 GSVFRGIING-------STVAIKC------MRRSIS--KEVNLLKKINHFNLINLFGACE 383
G V+ G+ G + VAIK MR I E +++K+ N +++ L G
Sbjct: 29 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 88
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEFV--------SWNCRFRIALDVAHGLHYLHNC 435
++ E M G L +L R P S + ++A ++A G+ YL+
Sbjct: 89 QGQPTLVIMELMTRGDLKSYLRSLR-PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN 147
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+VH+D+++ N ++ ++ K+ +F R + E Y + +M+PE ++
Sbjct: 148 K---FVHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMSPESLK 203
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
G+ T D ++FGVVL E+ T E Y +G + E L +++
Sbjct: 204 DGVFTTYSDVWSFGVVLWEIATLAEQPY-----------------QGLSNEQVLRFVMEG 246
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L L C P+ RPS E++S++
Sbjct: 247 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 349 STVAIKCMRRSISKEVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK 407
S ++ +R + KEV++L+K++ H N+I L E + F+LV++ M+ G L D+L +K
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 408 RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVR 467
R L+V LH L+ VH+D+ NILLD ++ KL +F F
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF-- 170
Query: 468 SAVREESGYSSTKTAVGTNGYMAPEYMEYGL------VTPEMDTYAFGVVLLELITGKEA 521
+ + + G + GT Y+APE +E + E+D ++ GV++ L+ G
Sbjct: 171 -SCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 522 AYKQDGEEILLAEAVFS 538
+ + +++L+ + S
Sbjct: 229 FWHR--KQMLMLRMIMS 243
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 351 VAIKCMRR--------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIKC+ + S+ E+ +L KI H N++ L E G YL+ + + G L D
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 403 WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL---LDKNLRAK 459
+ +K F + R+ V + YLH D G VH+D+ N+L LD++ +
Sbjct: 106 RIVEKG---FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F + E+ G S TA GT GY+APE + + +D ++ GV+ L+ G
Sbjct: 160 ISDFGLSK---MEDPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 520 EAAYKQDG----EEILLAEAVF 537
Y ++ E+IL AE F
Sbjct: 216 PPFYDENDAKLFEQILKAEYEF 237
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VA++ + ++ + +EV ++K +NH N++ LF E + YLV E
Sbjct: 34 RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVME 93
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 94 YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQY---CHQKFIVHRDLKAENLLLD 147
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-YGLVTPEMDTYAFGVVL 512
++ K+A+F F E + + G+ Y APE + PE+D ++ GV+L
Sbjct: 148 ADMNIKIADFGF----SNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 513 LELITG 518
L++G
Sbjct: 204 YTLVSG 209
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-W 403
+I+ V K + S+ +EV LLK+++H N++ L+ E G FYLV E G L D
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 117
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
+ +KR+ E + RI V G+ Y+H VH+D+ N+LL+ ++K AN
Sbjct: 118 ISRKRFSEVDA----ARIIRQVLSGITYMHKNK---IVHRDLKPENLLLES--KSKDANI 168
Query: 464 SFVRSAVREE-SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ + K +GT Y+APE + +G + D ++ GV+L L++G
Sbjct: 169 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 351 VAIKCMRR--------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIKC+ + S+ E+ +L KI H N++ L E G YL+ + + G L D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 403 WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL---LDKNLRAK 459
+ +K F + R+ V + YLH D G VH+D+ N+L LD++ +
Sbjct: 106 RIVEKG---FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F + E+ G S TA GT GY+APE + + +D ++ GV+ L+ G
Sbjct: 160 ISDFGLSK---MEDPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 520 EAAYKQDG----EEILLAEAVF 537
Y ++ E+IL AE F
Sbjct: 216 PPFYDENDAKLFEQILKAEYEF 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 351 VAIKCMRR--------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
VAIKC+ + S+ E+ +L KI H N++ L E G YL+ + + G L D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 403 WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL---LDKNLRAK 459
+ +K F + R+ V + YLH D G VH+D+ N+L LD++ +
Sbjct: 106 RIVEKG---FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+++F + E+ G S TA GT GY+APE + + +D ++ GV+ L+ G
Sbjct: 160 ISDFGLSK---MEDPG-SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 520 EAAYKQDG----EEILLAEAVF 537
Y ++ E+IL AE F
Sbjct: 216 PPFYDENDAKLFEQILKAEYEF 237
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-W 403
+I+ V K + S+ +EV LLK+++H N++ L+ E G FYLV E G L D
Sbjct: 81 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 140
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD-KNLRAKLAN 462
+ +KR+ E + RI V G+ Y+H VH+D+ N+LL+ K+ A +
Sbjct: 141 ISRKRFSEVDA----ARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRI 193
Query: 463 FSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
F S E S K +GT Y+APE + +G + D ++ GV+L L++G
Sbjct: 194 IDFGLSTHFEAS--KKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-W 403
+I+ V K + S+ +EV LLK+++H N++ L+ E G FYLV E G L D
Sbjct: 82 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 141
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD-KNLRAKLAN 462
+ +KR+ E + RI V G+ Y+H VH+D+ N+LL+ K+ A +
Sbjct: 142 ISRKRFSEVDA----ARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRI 194
Query: 463 FSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
F S E S K +GT Y+APE + +G + D ++ GV+L L++G
Sbjct: 195 IDFGLSTHFEAS--KKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 247
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 61/304 (20%)
Query: 316 LKFYKYEDLVVATENFSPKNMIDGSVFRGIING-----STVAIKCM--------RRSISK 362
+ + K E+++ A E G V RG + S VAIK + RR
Sbjct: 15 VSYVKIEEVIGAGEF--------GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 66
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
E +++ + H N+I L G + ++ EFMENG+L +L + +F +
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN--------DGQFTVI 118
Query: 423 ------LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+A G+ YL + YVH+D+++ NIL++ NL K+++F R + E S
Sbjct: 119 QLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSD 174
Query: 477 SSTKTAVGTN---GYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-GKEAAYKQDGEEILL 532
+ +++G + APE + + T D +++G+V+ E+++ G+ + ++++
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI- 233
Query: 533 AEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVST 592
NA + L P + L L L C ++ +RP +VVS
Sbjct: 234 -----------NAIEQDYRLPPP------PDCPTSLHQLMLDCWQKDRNARPRFPQVVSA 276
Query: 593 LMKI 596
L K+
Sbjct: 277 LDKM 280
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 120/294 (40%), Gaps = 50/294 (17%)
Query: 321 YEDLVVATENFSPKNMIDGSVFRGII--NGSTVAIKCMRRSIS--------KEVNLLKKI 370
+EDLV+ E N G VF G + + + VA+K R ++ +E +LK+
Sbjct: 113 HEDLVLG-EQIGRGNF--GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169
Query: 371 NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIAL------D 424
+H N++ L G C Y+V E ++ G +L + R R+ D
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE--------GARLRVKTLLQMVGD 221
Query: 425 VAHGLHYLHN-CTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAV 483
A G+ YL + C +H+D+++ N L+ + K+++F R S V
Sbjct: 222 AAAGMEYLESKCC----IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV 277
Query: 484 GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGG 543
+ APE + YG + E D ++FG++L E + + Y L + VE G
Sbjct: 278 PVK-WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN-----LSNQQTREFVEKG 331
Query: 544 NAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKIQ 597
L P L + + L C A EP RPS + + L I+
Sbjct: 332 GR------LPCPELCPDA------VFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-W 403
+I+ V K + S+ +EV LLK+++H N++ L+ E G FYLV E G L D
Sbjct: 64 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 123
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD-KNLRAKLAN 462
+ +KR+ E + RI V G+ Y+H VH+D+ N+LL+ K+ A +
Sbjct: 124 ISRKRFSEVDA----ARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRI 176
Query: 463 FSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
F S E S K +GT Y+APE + +G + D ++ GV+L L++G
Sbjct: 177 IDFGLSTHFEAS--KKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK-KRYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L + KR PE +
Sbjct: 56 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI 115
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 116 LG----KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 167
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA 533
S + VGT YMAPE ++ + + D ++ G+ L+EL G+ D +E+
Sbjct: 168 ---SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL--- 221
Query: 534 EAVFS--MVEGGNAE 546
EA+F +V+G E
Sbjct: 222 EAIFGRPVVDGEEGE 236
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 61/304 (20%)
Query: 316 LKFYKYEDLVVATENFSPKNMIDGSVFRGIING-----STVAIKCM--------RRSISK 362
+ + K E+++ A E G V RG + S VAIK + RR
Sbjct: 13 VSYVKIEEVIGAGEF--------GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 64
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
E +++ + H N+I L G + ++ EFMENG+L +L + +F +
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN--------DGQFTVI 116
Query: 423 ------LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+A G+ YL + YVH+D+++ NIL++ NL K+++F R + E S
Sbjct: 117 QLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSR-FLEENSSD 172
Query: 477 SSTKTAVGTN---GYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-GKEAAYKQDGEEILL 532
+ +++G + APE + + T D +++G+V+ E+++ G+ + ++++
Sbjct: 173 PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI- 231
Query: 533 AEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVST 592
NA + L P + L L L C ++ +RP +VVS
Sbjct: 232 -----------NAIEQDYRLPPP------PDCPTSLHQLMLDCWQKDRNARPRFPQVVSA 274
Query: 593 LMKI 596
L K+
Sbjct: 275 LDKM 278
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 400 LSDWLHKKR---------YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
LS +L KR Y +F++ + VA G+ +L + +H+D+++ NI
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAARNI 175
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGV 510
LL + K+ +F R + ++ Y A +MAPE + + T + D ++FGV
Sbjct: 176 LLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 511 VLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIM 570
+L E+ + + Y G +I E + EG A P+ + +
Sbjct: 235 LLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE------MYQ 278
Query: 571 LCLACIAREPESRPSMAEVVSTL 593
L C EP RP+ +E+V L
Sbjct: 279 TMLDCWHGEPSQRPTFSELVEHL 301
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 38 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 95
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+V ++ E SL LH IA A G+ YLH + +H+D+ S N
Sbjct: 96 IVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNN 150
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMDTY 506
I L ++ K+ +F R SG + G+ +MAPE + P + D Y
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
AFG+VL EL+TG + Y I + + MV G+ + P+L +
Sbjct: 210 AFGIVLYELMTG-QLPY----SNINNRDQIIEMVGRGS--------LSPDLSKVRSNCPK 256
Query: 567 HLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L C+ ++ + RPS +++ + ++
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 22/187 (11%)
Query: 343 RGIINGSTVAIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R I+ G VA+K + ++ + +EV + K +NH N++ LF E + YLV E
Sbjct: 34 RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXE 93
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
+ G + D+L + +FR + + Y C VH+D+ + N+LLD
Sbjct: 94 YASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQY---CHQKFIVHRDLKAENLLLD 147
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAV-GTNGYMAPEYME-YGLVTPEMDTYAFGVV 511
+ K+A+F F E + + A G Y APE + PE+D ++ GV+
Sbjct: 148 ADXNIKIADFGF-----SNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 512 LLELITG 518
L L++G
Sbjct: 203 LYTLVSG 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 26 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 83
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+V ++ E SL LH IA A G+ YLH + +H+D+ S N
Sbjct: 84 IVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNN 138
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMDTY 506
I L ++ K+ +F R SG + G+ +MAPE + P + D Y
Sbjct: 139 IFLHEDNTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 197
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
AFG+VL EL+TG + Y I + + MV G+ + P+L +
Sbjct: 198 AFGIVLYELMTG-QLPY----SNINNRDQIIEMVGRGS--------LSPDLSKVRSNCPK 244
Query: 567 HLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L C+ ++ + RPS +++ + ++
Sbjct: 245 RMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 350 TVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+VA+KC++ + +EVN + ++H NLI L+G + +V E GS
Sbjct: 42 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGS 100
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L D L K + + R+ A+ VA G+ YL + ++H+D+++ N+LL K
Sbjct: 101 LLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 155
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F +R+ + + Y + + APE ++ + DT+ FGV L E+ T G
Sbjct: 156 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 215
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+E +G +IL + + L P ++ + + + C A
Sbjct: 216 QEPWIGLNGSQIL-----------HKIDKEGERLPRP------EDCPQDIYNVMVQCWAH 258
Query: 579 EPESRPSMAEVVSTLMKIQ 597
+PE RP+ + L++ Q
Sbjct: 259 KPEDRPTFVALRDFLLEAQ 277
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 42 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 99
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 100 IVTQWCEGSSLYHHLHIIETKF-EMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKS 152
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 153 NNIFLHEDLTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 212 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 258
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 259 PKAMKRLMAECLKKKRDERPLFPQILASI 287
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGACEHD-GVF--- 388
G V+RG G VA+K RS +E + + + H N++ A D G +
Sbjct: 43 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 102
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+LV ++ E+GSL D+L+ RY V+ ++AL A GL +LH P H+
Sbjct: 103 WLVSDYHEHGSLFDYLN--RYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 158
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEY------ 493
D+ S NIL+ KN +A+ AVR +S + A VGT YMAPE
Sbjct: 159 DLKSKNILVKKNGTCCIADLGL---AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 215
Query: 494 MEYGLVTPEMDTYAFGVVLLEL 515
M++ D YA G+V E+
Sbjct: 216 MKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGACEHD-GVF--- 388
G V+RG G VA+K RS +E + + + H N++ A D G +
Sbjct: 56 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+LV ++ E+GSL D+L+ RY V+ ++AL A GL +LH P H+
Sbjct: 116 WLVSDYHEHGSLFDYLN--RYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEY------ 493
D+ S NIL+ KN +A+ AVR +S + A VGT YMAPE
Sbjct: 172 DLKSKNILVKKNGTCCIADLGL---AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 228
Query: 494 MEYGLVTPEMDTYAFGVVLLEL 515
M++ D YA G+V E+
Sbjct: 229 MKHFESFKRADIYAMGLVFWEI 250
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 42/234 (17%)
Query: 320 KYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISKEVNLLKKINHFNLI--- 376
+YE +V K D V + I G+ ++ +R S++V +K ++ F +I
Sbjct: 59 RYEKIVKKIRGLQMKAE-DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRS 117
Query: 377 ---------------------NLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS- 414
LF A + D Y+V E+M G L + + PE +
Sbjct: 118 DSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAK 177
Query: 415 -WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
+ +ALD H + G +H+D+ N+LLDK+ KLA+F +E
Sbjct: 178 FYTAEVVLALDAIHSM---------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DE 226
Query: 474 SGYSSTKTAVGTNGYMAPEYMEY----GLVTPEMDTYAFGVVLLELITGKEAAY 523
+G TAVGT Y++PE ++ G E D ++ GV L E++ G Y
Sbjct: 227 TGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 38 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTAPQLA 95
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+V ++ E SL LH IA A G+ YLH + +H+D+ S N
Sbjct: 96 IVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNN 150
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMDTY 506
I L ++ K+ +F R SG + G+ +MAPE + P + D Y
Sbjct: 151 IFLHEDNTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 507 AFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH 566
AFG+VL EL+TG + Y I + + MV G+ + P+L +
Sbjct: 210 AFGIVLYELMTG-QLPY----SNINNRDQIIEMVGRGS--------LSPDLSKVRSNCPK 256
Query: 567 HLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ L C+ ++ + RPS +++ + ++
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 50 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 107
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKF-EMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKS 160
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 161 NNIFLHEDLTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 220 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 266
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 267 PKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGACEHD-GVF--- 388
G V+RG G VA+K RS +E + + + H N++ A D G +
Sbjct: 17 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+LV ++ E+GSL D+L+ RY V+ ++AL A GL +LH P H+
Sbjct: 77 WLVSDYHEHGSLFDYLN--RYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEY------ 493
D+ S NIL+ KN +A+ AVR +S + A VGT YMAPE
Sbjct: 133 DLKSKNILVKKNGTCCIADLGL---AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 189
Query: 494 MEYGLVTPEMDTYAFGVVLLEL 515
M++ D YA G+V E+
Sbjct: 190 MKHFESFKRADIYAMGLVFWEI 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 79
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKF-EMIK---LIDIARQTAQGMDYLHAKS---IIHRDLKS 132
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 133 NNIFLHEDLTVKIGDFGLATEKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 238
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 116/235 (49%), Gaps = 30/235 (12%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
+E + K++H L+ +G C + Y+V E++ NG L ++L + + + + + +
Sbjct: 52 QEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEM 109
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
DV G+ +L + ++H+D+++ N L+D++L K+++F R + ++ Y S+
Sbjct: 110 CYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--YVSS-- 162
Query: 482 AVGTN---GYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFS 538
VGT + APE Y + + D +AFG+++ E+ + + Y + +E V
Sbjct: 163 -VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY----DLYTNSEVVLK 217
Query: 539 MVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ +G L P+L ++ + + +C PE RP+ +++S++
Sbjct: 218 VSQGHR-------LYRPHLASDT------IYQIMYSCWHELPEKRPTFQQLLSSI 259
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 123/295 (41%), Gaps = 53/295 (17%)
Query: 339 GSVFRGIINGSTVAIKCMRRSISKEVNLLKKINHFNLI-----NLFGACEHDGV------ 387
G V+RG+ +G +VA+K S E + ++ +N + N+ G D
Sbjct: 22 GEVWRGLWHGESVAVKIF--SSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSST 79
Query: 388 -FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYV 441
+L+ + E+GSL D+L ++ ++ R+A+ A GL +LH P
Sbjct: 80 QLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFGTQGKPAIA 135
Query: 442 HKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS----STKTAVGTNGYMAPEYMEYG 497
H+D S N+L+ NL+ +A+ AV G VGT YMAPE ++
Sbjct: 136 HRDFKSRNVLVKSNLQCCIADLGL---AVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQ 192
Query: 498 LVT------PEMDTYAFGVVLLE-----LITGKEAAYKQDGEEILLAEAVFSMVEGGNAE 546
+ T D +AFG+VL E ++ G Y+ +++ + F +
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFE-------D 245
Query: 547 AKLSVLVDPNLQANKKEIAHHLIMLCLACIARE-----PESRPSMAEVVSTLMKI 596
K V VD +A ++ LA + RE P +R + + TL KI
Sbjct: 246 MKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKI 300
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGACEHD-GVF--- 388
G V+RG G VA+K RS +E + + + H N++ A D G +
Sbjct: 18 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 77
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+LV ++ E+GSL D+L+ RY V+ ++AL A GL +LH P H+
Sbjct: 78 WLVSDYHEHGSLFDYLN--RYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 133
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEY------ 493
D+ S NIL+ KN +A+ AVR +S + A VGT YMAPE
Sbjct: 134 DLKSKNILVKKNGTCCIADLGL---AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 190
Query: 494 MEYGLVTPEMDTYAFGVVLLEL 515
M++ D YA G+V E+
Sbjct: 191 MKHFESFKRADIYAMGLVFWEI 212
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 44/263 (16%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH---------- 405
M+ +E L+ + ++ N++ L G C L++E+M G L+++L
Sbjct: 93 MQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSL 152
Query: 406 -------KKRY----PEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK 454
+ R P +S + IA VA G+ YL ++ +VH+D+++ N L+ +
Sbjct: 153 SHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGE 209
Query: 455 NLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLE 514
N+ K+A+F R+ + + A+ +M PE + Y T E D +A+GVVL E
Sbjct: 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWE 268
Query: 515 LIT-GKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCL 573
+ + G + Y EE++ + D N+ A + L L
Sbjct: 269 IFSYGLQPYYGMAHEEVIY------------------YVRDGNILACPENCPLELYNLMR 310
Query: 574 ACIAREPESRPSMAEVVSTLMKI 596
C ++ P RPS + L ++
Sbjct: 311 LCWSKLPADRPSFCSIHRILQRM 333
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 41/265 (15%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 400 LSDWLHKKR-----------YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
LS +L KR Y +F++ + VA G+ +L + +H+D+++
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAAR 177
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
NILL + K+ +F R ++ + +MAPE + + T + D ++F
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WMAPETIFDRVYTIQSDVWSF 236
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHL 568
GV+L E+ + + Y G +I E + EG A P+ + +
Sbjct: 237 GVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE------M 280
Query: 569 IMLCLACIAREPESRPSMAEVVSTL 593
L C EP RP+ +E+V L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 34/266 (12%)
Query: 350 TVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+VA+KC++ + +EVN + ++H NLI L+G + +V E GS
Sbjct: 48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGS 106
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L D L K + + R+ A+ VA G+ YL + ++H+D+++ N+LL K
Sbjct: 107 LLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 161
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F +R+ + + Y + + APE ++ + DT+ FGV L E+ T G
Sbjct: 162 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 221
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+E +G +IL + + L P ++ + + + C A
Sbjct: 222 QEPWIGLNGSQIL-----------HKIDKEGERLPRP------EDCPQDIYNVMVQCWAH 264
Query: 579 EPESRPSMAEVVSTLMKIQLDVQRSQ 604
+PE RP+ + L++ Q R++
Sbjct: 265 KPEDRPTFVALRDFLLEAQPTDMRAE 290
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGACEHD-GVF--- 388
G V+RG G VA+K RS +E + + + H N++ A D G +
Sbjct: 23 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 82
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+LV ++ E+GSL D+L+ RY V+ ++AL A GL +LH P H+
Sbjct: 83 WLVSDYHEHGSLFDYLN--RYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 138
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEY------ 493
D+ S NIL+ KN +A+ AVR +S + A VGT YMAPE
Sbjct: 139 DLKSKNILVKKNGTCCIADLGL---AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 195
Query: 494 MEYGLVTPEMDTYAFGVVLLEL 515
M++ D YA G+V E+
Sbjct: 196 MKHFESFKRADIYAMGLVFWEI 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-W 403
+I+ V K + S+ +EV LLK+++H N+ L+ E G FYLV E G L D
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI 117
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD-KNLRAKLAN 462
+ +KR+ E + RI V G+ Y H VH+D+ N+LL+ K+ A +
Sbjct: 118 ISRKRFSEVDA----ARIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDANIRI 170
Query: 463 FSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
F S E S K +GT Y+APE + +G + D ++ GV+L L++G
Sbjct: 171 IDFGLSTHFEAS--KKXKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 49 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 106
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKF-EMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKS 159
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 160 NNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 219 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 265
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 266 PKAMKRLMAECLKKKRDERPLFPQILASI 294
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 357 RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ ++ E+ ++ + H N++NL GAC H G ++ E+ G L ++L +K +
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 152
Query: 416 NCR-------FRIALDVAHGLHYL--HNCTDPGYVHKDISSGNILLDKNLRAKLANFSFV 466
+ R + VA G+ +L NC +H+D+++ N+LL AK+ +F
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 467 RSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQD 526
R + +S Y A +MAPE + + T + D +++G++L E+ + Y
Sbjct: 208 RD-IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG- 265
Query: 527 GEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSM 586
IL+ + +V+ G A+ + ++ + AC A EP RP+
Sbjct: 266 ---ILVNSKFYKLVKDGYQMAQPAF------------APKNIYSIMQACWALEPTHRPTF 310
Query: 587 AEVVSTLMKIQLDVQRSQ 604
++ S L + + +R +
Sbjct: 311 QQICSFLQEQAQEDRRER 328
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 350 TVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+VA+KC++ + +EVN + ++H NLI L+G + +V E GS
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGS 96
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L D L K + + R+ A+ VA G+ YL + ++H+D+++ N+LL K
Sbjct: 97 LLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 151
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F +R+ + + Y + + APE ++ + DT+ FGV L E+ T G
Sbjct: 152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 211
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+E +G +IL + + L P ++ + + + C A
Sbjct: 212 QEPWIGLNGSQIL-----------HKIDKEGERLPRP------EDCPQDIYNVMVQCWAH 254
Query: 579 EPESRPSMAEVVSTLMKIQ 597
+PE RP+ + L++ Q
Sbjct: 255 KPEDRPTFVALRDFLLEAQ 273
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 350 TVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+VA+KC++ + +EVN + ++H NLI L+G + +V E GS
Sbjct: 42 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGS 100
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L D L K + + R+ A+ VA G+ YL + ++H+D+++ N+LL K
Sbjct: 101 LLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 155
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F +R+ + + Y + + APE ++ + DT+ FGV L E+ T G
Sbjct: 156 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 215
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+E +G +IL + + L P ++ + + + C A
Sbjct: 216 QEPWIGLNGSQIL-----------HKIDKEGERLPRP------EDCPQDIYNVMVQCWAH 258
Query: 579 EPESRPSMAEVVSTLMKIQ 597
+PE RP+ + L++ Q
Sbjct: 259 KPEDRPTFVALRDFLLEAQ 277
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 371 NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
NH L LF + + V EF+ G L + K R F RF A ++ L
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARF-YAAEIISALM 138
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+LH D G +++D+ N+LLD KLA+F + + +T T GT Y+A
Sbjct: 139 FLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI---CNGVTTATFCGTPDYIA 192
Query: 491 PEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFS 538
PE ++ L P +D +A GV+L E++ G A ++ + E+ L EA+ +
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCG-HAPFEAENEDDLF-EAILN 238
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGACEHD-GVF--- 388
G V+RG G VA+K RS +E + + + H N++ A D G +
Sbjct: 20 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 79
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+LV ++ E+GSL D+L+ RY V+ ++AL A GL +LH P H+
Sbjct: 80 WLVSDYHEHGSLFDYLN--RYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 135
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEY------ 493
D+ S NIL+ KN +A+ AVR +S + A VGT YMAPE
Sbjct: 136 DLKSKNILVKKNGTCCIADLGL---AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 192
Query: 494 MEYGLVTPEMDTYAFGVVLLEL 515
M++ D YA G+V E+
Sbjct: 193 MKHFESFKRADIYAMGLVFWEI 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 27 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 84
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKF-EMIK---LIDIARQTAQGMDYLHAKS---IIHRDLKS 137
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 243
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 173
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R + ++ Y A +MAPE + + T + D
Sbjct: 174 LAARNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 233 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 279
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 280 ---MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 50 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 107
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKF-EMIKL---IDIARQTAQGMDYLHAKS---IIHRDLKS 160
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 161 NNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 220 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 266
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 267 PKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 359 SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-WLHKKRYPEFVSWNC 417
+I +EV LLKK++H N++ LF E FY+V E G L D + +KR+ E +
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA--- 123
Query: 418 RFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVREES 474
RI V G+ Y+H VH+D+ NILL +K+ K+ +F S +++
Sbjct: 124 -ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL--STCFQQN 177
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
+ K +GT Y+APE + G + D ++ GV+L L++G Y ++ +IL
Sbjct: 178 --TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 24 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 81
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 82 IVTQWCEGSSLYHHLHIIETKF-EMIK---LIDIARQTAQGMDYLHAKS---IIHRDLKS 134
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 135 NNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 194 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 240
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 241 PKAMKRLMAECLKKKRDERPLFPQILASI 269
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 359 SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-WLHKKRYPEFVSWNC 417
+I +EV LLKK++H N++ LF E FY+V E G L D + +KR+ E +
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA--- 123
Query: 418 RFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVREES 474
RI V G+ Y+H VH+D+ NILL +K+ K+ +F S +++
Sbjct: 124 -ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL--STCFQQN 177
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
+ K +GT Y+APE + G + D ++ GV+L L++G Y ++ +IL
Sbjct: 178 --TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 79
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKF-EMIK---LIDIARQTAQGMDYLHAKS---IIHRDLKS 132
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 238
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 96 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 155
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 210
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R + ++ Y A +MAPE + + T + D
Sbjct: 211 LAARNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 269
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 270 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 316
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 317 ---MYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 350 TVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+VA+KC++ + +EVN + ++H NLI L+G + +V E GS
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGS 96
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L D L K + + R+ A+ VA G+ YL + ++H+D+++ N+LL K
Sbjct: 97 LLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 151
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F +R+ + + Y + + APE ++ + DT+ FGV L E+ T G
Sbjct: 152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 211
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+E +G +IL + + L P ++ + + + C A
Sbjct: 212 QEPWIGLNGSQIL-----------HKIDKEGERLPRP------EDCPQDIYNVMVQCWAH 254
Query: 579 EPESRPSMAEVVSTLMKIQ 597
+PE RP+ + L++ Q
Sbjct: 255 KPEDRPTFVALRDFLLEAQ 273
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 358 RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNC 417
+ +EV+ +++H N++++ E D +YLV E++E +LS+++ + P +S +
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGP--LSVDT 112
Query: 418 RFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS 477
+ G+ + H D VH+DI NIL+D N K+ +F ++ E+ +
Sbjct: 113 AINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLT 167
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
T +GT Y +PE + G T E D Y+ G+VL E++ G+
Sbjct: 168 QTNHVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 357 RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ ++ E+ ++ + H N++NL GAC H G ++ E+ G L ++L +K +
Sbjct: 85 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 144
Query: 416 NCR-------FRIALDVAHGLHYL--HNCTDPGYVHKDISSGNILLDKNLRAKLANFSFV 466
+ R + VA G+ +L NC +H+D+++ N+LL AK+ +F
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGDFGLA 199
Query: 467 RSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQD 526
R + +S Y A +MAPE + + T + D +++G++L E+ + Y
Sbjct: 200 RD-IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG- 257
Query: 527 GEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSM 586
IL+ + +V+ G A+ + ++ + AC A EP RP+
Sbjct: 258 ---ILVNSKFYKLVKDGYQMAQPAF------------APKNIYSIMQACWALEPTHRPTF 302
Query: 587 AEVVSTLMK 595
++ S L +
Sbjct: 303 QQICSFLQE 311
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 99 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 153
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + + APE + + D ++FGVVL EL T
Sbjct: 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 41/246 (16%)
Query: 347 NGSTVAIKCMRRSISKEVNLLKKINHFN-------------LINLFGACEHDGVFYLVYE 393
NG A+K +++ I V LK++ H N +I ++G + +++ +
Sbjct: 30 NGRYYAMKVLKKEI---VVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86
Query: 394 FMENGSLSDWLHK-KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
++E G L L K +R+P V+ +F A +V L YLH+ +++D+ NILL
Sbjct: 87 YIEGGELFSLLRKSQRFPNPVA---KF-YAAEVCLALEYLHSKD---IIYRDLKPENILL 139
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
DKN K+ +F F + T GT Y+APE + +D ++FG+++
Sbjct: 140 DKNGHIKITDFGFAKYVP------DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI 193
Query: 513 LELITGKEAAYKQDG----EEILLAEAVFSMVEGGNAEAKLSVLVD-------PNLQANK 561
E++ G Y + E+IL AE F + + LS L+ NLQ
Sbjct: 194 YEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGT 253
Query: 562 KEIAHH 567
+++ +H
Sbjct: 254 EDVKNH 259
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 175
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R + ++ Y A +MAPE + + T + D
Sbjct: 176 LAARNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 234
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 235 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 281
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 282 ---MYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 27 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLA 84
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKF-EMIK---LIDIARQTAQGMDYLHAKS---IIHRDLKS 137
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 243
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 244 PKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
+E +++ N ++ LF A + D Y+V E+M G L + + PE W RF
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KW-ARFYT 174
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
A +V L +H+ G++H+D+ N+LLDK+ KLA+F +E G T
Sbjct: 175 A-EVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDT 228
Query: 482 AVGTNGYMAPEYMEY----GLVTPEMDTYAFGVVLLELITGKEAAY 523
AVGT Y++PE ++ G E D ++ GV L E++ G Y
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 359 SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-WLHKKRYPEFVSWNC 417
+I +EV LLKK++H N++ LF E FY+V E G L D + +KR+ E +
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-- 124
Query: 418 RFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVREES 474
RI V G+ Y+H VH+D+ NILL +K+ K+ +F S +++
Sbjct: 125 --RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL--STCFQQN 177
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
+ K +GT Y+APE + G + D ++ GV+L L++G Y ++ +IL
Sbjct: 178 --TKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL 231
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
+E +++ N ++ LF A + D Y+V E+M G L + + PE W RF
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KW-ARFYT 179
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
A +V L +H+ G++H+D+ N+LLDK+ KLA+F +E G T
Sbjct: 180 A-EVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDT 233
Query: 482 AVGTNGYMAPEYMEY----GLVTPEMDTYAFGVVLLELITGKEAAY 523
AVGT Y++PE ++ G E D ++ GV L E++ G Y
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K+NH N++ G
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 118
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 175
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 234
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 235 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 281
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 282 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
+E +++ N ++ LF A + D Y+V E+M G L + + PE W RF
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KW-ARFYT 179
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
A +V L +H+ G++H+D+ N+LLDK+ KLA+F +E G T
Sbjct: 180 A-EVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDT 233
Query: 482 AVGTNGYMAPEYMEY----GLVTPEMDTYAFGVVLLELITGKEAAY 523
AVGT Y++PE ++ G E D ++ GV L E++ G Y
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 164
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R + ++ Y A +MAPE + + T + D
Sbjct: 165 LAARNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 224 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 270
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 271 ---MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V++G +G VA+K + ++ EV +L+K H N++ LF
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTAPQLA 79
Query: 390 LVYEFMENGSLSDWLH--KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V ++ E SL LH + ++ E + IA A G+ YLH + +H+D+ S
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKF-EMIK---LIDIARQTAQGMDYLHAKS---IIHRDLKS 132
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMD 504
NI L ++L K+ +F R SG + G+ +MAPE + P + D
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRW-SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
YAFG+VL EL+TG+ + + + +F + G + P+L +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRD----QIIFMVGRG---------YLSPDLSKVRSNC 238
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C+ ++ + RP ++++++
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 36/262 (13%)
Query: 357 RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRY-----P 410
+ ++ E+ ++ + H N++NL GAC H G ++ E+ G L ++L +K P
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 411 EFVSWNCR------FRIALDVAHGLHYL--HNCTDPGYVHKDISSGNILLDKNLRAKLAN 462
F N + VA G+ +L NC +H+D+++ N+LL AK+ +
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGD 207
Query: 463 FSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAA 522
F R + +S Y A +MAPE + + T + D +++G++L E+ +
Sbjct: 208 FGLARD-IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 523 YKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPES 582
Y IL+ + +V+ G A+ + ++ + AC A EP
Sbjct: 267 YPG----ILVNSKFYKLVKDGYQMAQPAF------------APKNIYSIMQACWALEPTH 310
Query: 583 RPSMAEVVSTLMKIQLDVQRSQ 604
RP+ ++ S L + + +R +
Sbjct: 311 RPTFQQICSFLQEQAQEDRRER 332
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 164
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R + ++ Y A +MAPE + + T + D
Sbjct: 165 LAARNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 224 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 270
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 271 ---MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K+NH N++ G
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 104
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 161
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 220
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 221 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 267
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 268 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 36/262 (13%)
Query: 357 RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRY-----P 410
+ ++ E+ ++ + H N++NL GAC H G ++ E+ G L ++L +K P
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 411 EFVSWNCR------FRIALDVAHGLHYL--HNCTDPGYVHKDISSGNILLDKNLRAKLAN 462
F N + VA G+ +L NC +H+D+++ N+LL AK+ +
Sbjct: 153 AFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGD 207
Query: 463 FSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAA 522
F R + +S Y A +MAPE + + T + D +++G++L E+ +
Sbjct: 208 FGLARD-IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 523 YKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPES 582
Y IL+ + +V+ G A+ + ++ + AC A EP
Sbjct: 267 YPG----ILVNSKFYKLVKDGYQMAQPAF------------APKNIYSIMQACWALEPTH 310
Query: 583 RPSMAEVVSTLMKIQLDVQRSQ 604
RP+ ++ S L + + +R +
Sbjct: 311 RPTFQQICSFLQEQAQEDRRER 332
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 347 NGSTVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFME 396
G A+K +R+ + E +L+ H L L A + V E+
Sbjct: 32 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 91
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L + H R F RF A ++ L YLH+ V++DI N++LDK+
Sbjct: 92 GGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDG 145
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F + + S ++ KT GT Y+APE +E +D + GVV+ E++
Sbjct: 146 HIKITDFGLCKEGI---SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Query: 517 TGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ-----ANKKEIA 565
G+ Y QD E IL+ E F A++ L+ L+ DP + ++ KE+
Sbjct: 203 CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 262
Query: 566 HHLIMLCL 573
H L +
Sbjct: 263 EHRFFLSI 270
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 347 NGSTVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFME 396
G A+K +R+ + E +L+ H L L A + V E+
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L + H R F RF A ++ L YLH+ V++DI N++LDK+
Sbjct: 89 GGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDG 142
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F + + S ++ KT GT Y+APE +E +D + GVV+ E++
Sbjct: 143 HIKITDFGLCKEGI---SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 517 TGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ-----ANKKEIA 565
G+ Y QD E IL+ E F A++ L+ L+ DP + ++ KE+
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 566 HHLIMLCL 573
H L +
Sbjct: 260 EHRFFLSI 267
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 98 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 152
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 153 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 97 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 151
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 152 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+++++ NIL++ R
Sbjct: 100 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENRV 154
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ Y + + APE + + D ++FGVVL EL T
Sbjct: 155 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 99 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 153
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 46/268 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 60 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 119
Query: 400 LSDWLHKKR------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDI 445
LS +L KR Y +F++ + VA G+ +L C +H+D+
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRDL 174
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ NILL + K+ +F R ++ + +MAPE + + T + D
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WMAPETIFDRVYTIQSDV 233
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 234 WSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE---- 279
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 280 --MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 103 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 157
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 158 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 347 NGSTVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFME 396
G A+K +R+ + E +L+ H L L A + V E+
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L + H R F RF A ++ L YLH+ V++DI N++LDK+
Sbjct: 89 GGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDG 142
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F + + S ++ KT GT Y+APE +E +D + GVV+ E++
Sbjct: 143 HIKITDFGLCKEGI---SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 517 TGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ-----ANKKEIA 565
G+ Y QD E IL+ E F A++ L+ L+ DP + ++ KE+
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 566 HHLIMLCL 573
H L +
Sbjct: 260 EHRFFLSI 267
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 99 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 153
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 106 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 160
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 161 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 130 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 184
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 185 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 102 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 156
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 104 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 158
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 159 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 21/191 (10%)
Query: 339 GSVFRG--IINGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V+ + G VAI+ M + I E+ ++++ + N++N + +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93
Query: 390 LVYEFMENGSLSDWLHKKRYPEF-VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+V E++ GSL+D + + E ++ CR + L +LH+ +H+DI S
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSD 145
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
NILL + KL +F F E+S S T VGT +MAPE + P++D ++
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRS---TMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 509 GVVLLELITGK 519
G++ +E+I G+
Sbjct: 203 GIMAIEMIEGE 213
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 105 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 159
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 160 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 61 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 120
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 121 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 177
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 178 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 236
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 237 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 283
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 284 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 51 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 110
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 111 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 167
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 168 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 226
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 227 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 273
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 274 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 173
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R ++ + +MAPE + + T + D
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WMAPETIFDRVYTIQSD 232
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 233 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 279
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 280 ---MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 108 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 167
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 168 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 219
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA 533
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+ D +E+
Sbjct: 220 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--- 273
Query: 534 EAVFS-MVEGGNAE 546
E +F VEG AE
Sbjct: 274 ELMFGCQVEGDAAE 287
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 117 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 171
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 119 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 175
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 234
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 235 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 281
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 282 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 71 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 130
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 131 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 187
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 188 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 246
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 247 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 293
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 294 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 161
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 220
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 221 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 267
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 268 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 36 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 95
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 96 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 152
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 153 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 211
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 212 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 258
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 259 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 117 SLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 171
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ EF+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL ++L K + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 102 SLREYLQK--HKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 156
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 348 GSTVAIKCMR--------RSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFMEN 397
G VA+K ++ + KE+ +L+ + H N++ G C DG L+ EF+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
GSL ++L K + ++ + + A+ + G+ YL + YVH+D+++ N+L++ +
Sbjct: 110 GSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 164
Query: 458 AKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F ++ ++ + + APE + D ++FGV L EL+T
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 160
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 219
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 266
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 267 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 104 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 160
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 219
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 266
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 267 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 173
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R ++ + +MAPE + + T + D
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK-WMAPETIFDRVYTIQSD 232
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 233 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 279
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 280 ---MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 175
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R S Y A+ +M PE
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLPVKWMPPEAFME 234
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 235 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 281
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 282 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 109
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 164
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R ++ + +MAPE + + T + D
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WMAPETIFDRVYTIQSD 223
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 224 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 270
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 271 ---MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 20/195 (10%)
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHK 443
HD + + V E+ G L + H R F RF A ++ L YLH ++ V++
Sbjct: 220 HDRLCF-VMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYR 273
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
D+ N++LDK+ K+ +F + +++ + + KT GT Y+APE +E +
Sbjct: 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDGA---TMKTFCGTPEYLAPEVLEDNDYGRAV 330
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNL 557
D + GVV+ E++ G+ Y QD E+ IL+ E F G A++ LS L+ DP
Sbjct: 331 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ 390
Query: 558 Q-----ANKKEIAHH 567
+ + KEI H
Sbjct: 391 RLGGGSEDAKEIMQH 405
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 348 GSTVAIKCMR--------RSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFMEN 397
G VA+K ++ + KE+ +L+ + H N++ G C DG L+ EF+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
GSL ++L K + ++ + + A+ + G+ YL + YVH+D+++ N+L++ +
Sbjct: 98 GSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 152
Query: 458 AKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F ++ ++ + + APE + D ++FGV L EL+T
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 103 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 157
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R +E KT +MA E ++ T +
Sbjct: 158 LAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKS 217
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 218 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 264
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 265 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 63 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 123 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 177
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 178 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 235
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 236 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 284
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 285 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 47/269 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 400 LSDWLHKKR-------------YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKD 444
LS +L KR Y +F++ + VA G+ +L C +H+D
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRD 164
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ NILL + K+ +F R ++ + +MAPE + + T + D
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK-WMAPETIFDRVYTIQSD 223
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 224 VWSFGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE--- 270
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 271 ---MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EVN+L++I H N+I L E+ L+ E + G L D+L +K E ++ +
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---ESLTED 108
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ + G+HYLH+ H D+ NI LLDKN+ R KL +F A +
Sbjct: 109 EATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI---AHKI 162
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
E+G + K GT ++APE + Y + E D ++ GV+ L++G + +E L
Sbjct: 163 EAG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 106 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 157
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA 533
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+ D +E+
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--- 211
Query: 534 EAVFS-MVEGGNAE 546
E +F VEG AE
Sbjct: 212 ELMFGCQVEGDAAE 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 44/221 (19%)
Query: 329 ENFSPKNMID---GSVFRGIIN---GSTVAIKCM---------------RRSISKEVNLL 367
+ + PK++I SV R ++ G A+K M R + +E ++L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 368 KKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVA 426
+++ H ++I L + E +LV++ M G L D+L +K +S I +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLL 210
Query: 427 HGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN 486
+ +LH VH+D+ NILLD N++ +L++F F + E G + GT
Sbjct: 211 EAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGF---SCHLEPG-EKLRELCGTP 263
Query: 487 GYMAPEYME---------YGLVTPEMDTYAFGVVLLELITG 518
GY+APE ++ YG E+D +A GV+L L+ G
Sbjct: 264 GYLAPEILKCSMDETHPGYG---KEVDLWACGVILFTLLAG 301
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 106 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 157
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA 533
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+ D +E+
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--- 211
Query: 534 EAVFS-MVEGGNAE 546
E +F VEG AE
Sbjct: 212 ELMFGCQVEGDAAE 225
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 158
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 265
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 266 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
V E+ G L + H R F RF A ++ L YLH ++ V++D+ N
Sbjct: 228 FVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLEN 282
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
++LDK+ K+ +F + +++ + + KT GT Y+APE +E +D + G
Sbjct: 283 LMLDKDGHIKITDFGLCKEGIKDGA---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 339
Query: 510 VVLLELITGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ----- 558
VV+ E++ G+ Y QD E+ IL+ E F G A++ LS L+ DP +
Sbjct: 340 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 399
Query: 559 ANKKEIAHH 567
+ KEI H
Sbjct: 400 EDAKEIMQH 408
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EVN+L++I H N+I L E+ L+ E + G L D+L +K E ++ +
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---ESLTED 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ + G+HYLH+ H D+ NI LLDKN+ R KL +F A +
Sbjct: 116 EATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI---AHKI 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
E+G + K GT ++APE + Y + E D ++ GV+ L++G + +E L
Sbjct: 170 EAG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 227
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 62 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 122 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 176
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 177 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 234
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 235 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 283
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 284 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 99 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 153
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 154 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 211
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 212 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 260
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 261 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 36 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 96 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 150
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 151 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 208
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 209 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 257
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 258 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 347 NGSTVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFME 396
G VA+K + R +E+++L+ + H ++I G CE G LV E++
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
GSL D+L + + A + G+ YLH Y+H+D+++ N+LLD +
Sbjct: 119 LGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDR 171
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F ++ Y + + APE ++ D ++FGV L EL+
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
Query: 517 T 517
T
Sbjct: 232 T 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 50/252 (19%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL--------HKKRYPEFV 413
KE+ + + +H N+++ + + +LV + + GS+ D + HK +
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS--------- 464
+ R +V GL YLH G +H+D+ +GNILL ++ ++A+F
Sbjct: 117 TIATILR---EVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 170
Query: 465 -FVRSAVREESGYSSTKTAVGTNGYMAPEYME----YGLVTPEMDTYAFGVVLLELITGK 519
R+ VR KT VGT +MAPE ME Y + D ++FG+ +EL TG
Sbjct: 171 DITRNKVR--------KTFVGTPCWMAPEVMEQVRGYDF---KADIWSFGITAIELATGA 219
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLV-DPNLQANKKEIAHHLIMLCLACIAR 578
+K ++L M+ N L V D + + +I LCL +
Sbjct: 220 APYHKYPPMKVL-------MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCL---QK 269
Query: 579 EPESRPSMAEVV 590
+PE RP+ AE++
Sbjct: 270 DPEKRPTAAELL 281
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EVN+L++I H N+I L E+ L+ E + G L D+L +K E ++ +
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---ESLTED 129
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ + G+HYLH+ H D+ NI LLDKN+ R KL +F A +
Sbjct: 130 EATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI---AHKI 183
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
E+G + K GT ++APE + Y + E D ++ GV+ L++G + +E L
Sbjct: 184 EAG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 241
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 103 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 157
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 158 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 216 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 264
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 265 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 158
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 265
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 266 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 73 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 132
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 133 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 184
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA 533
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+ D +E+
Sbjct: 185 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--- 238
Query: 534 EAVFS-MVEGGNAE 546
E +F VEG AE
Sbjct: 239 ELMFGCQVEGDAAE 252
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 98
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 99 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 154
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
D+++ N ++ + K+ +F R + E + Y + +MAPE ++ G+ T
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGMTRD-IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 214 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 256
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P+ RP+ E+V+ L
Sbjct: 257 CPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 106 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 157
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA 533
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+ D +E+
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--- 211
Query: 534 EAVFS-MVEGGNAE 546
E +F VEG AE
Sbjct: 212 ELMFGCQVEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 16/194 (8%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 106 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 157
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA 533
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+ D +E+
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--- 211
Query: 534 EAVFS-MVEGGNAE 546
E +F VEG AE
Sbjct: 212 ELMFGCQVEGDAAE 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 101 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 155
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 156 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 213
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 214 KSDVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP 262
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 263 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 34/266 (12%)
Query: 350 TVAIKCMRRSIS----------KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+VA+KC++ + +EVN + ++H NLI L+G + +V E GS
Sbjct: 48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGS 106
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L D L K + + R+ A+ VA G+ YL + ++H+D+++ N+LL K
Sbjct: 107 LLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 161
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F +R+ + + + + APE ++ + DT+ FGV L E+ T G
Sbjct: 162 IGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 221
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+E +G +IL + + L P ++ + + + C A
Sbjct: 222 QEPWIGLNGSQIL-----------HKIDKEGERLPRP------EDCPQDIYNVMVQCWAH 264
Query: 579 EPESRPSMAEVVSTLMKIQLDVQRSQ 604
+PE RP+ + L++ Q R++
Sbjct: 265 KPEDRPTFVALRDFLLEAQPTDMRAE 290
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ YL +VH+D
Sbjct: 102 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKYL---ASKKFVHRD 156
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTP 501
+++ N +LD+ K+A+F R +E Y S G +MA E ++ T
Sbjct: 157 LAARNCMLDEKFTVKVADFGLARDMYDKE--YYSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANK 561
+ D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 215 KSDVWSFGVLLWELMTRGAPPYP----DVNTFDITVYLLQGRR-------LLQPEYCPDP 263
Query: 562 KEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 264 ------LYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 201
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R Y A+ +M PE
Sbjct: 202 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-GYYRKGGCAMLPVKWMPPEAFME 260
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 261 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 307
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 308 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 50/252 (19%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL--------HKKRYPEFV 413
KE+ + + +H N+++ + + +LV + + GS+ D + HK +
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS--------- 464
+ R +V GL YLH G +H+D+ +GNILL ++ ++A+F
Sbjct: 122 TIATILR---EVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175
Query: 465 -FVRSAVREESGYSSTKTAVGTNGYMAPEYME----YGLVTPEMDTYAFGVVLLELITGK 519
R+ VR KT VGT +MAPE ME Y + D ++FG+ +EL TG
Sbjct: 176 DITRNKVR--------KTFVGTPCWMAPEVMEQVRGYDF---KADIWSFGITAIELATGA 224
Query: 520 EAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLV-DPNLQANKKEIAHHLIMLCLACIAR 578
+K ++L M+ N L V D + + +I LCL +
Sbjct: 225 APYHKYPPMKVL-------MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCL---QK 274
Query: 579 EPESRPSMAEVV 590
+PE RP+ AE++
Sbjct: 275 DPEKRPTAAELL 286
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 350 TVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
+VA+KC++ + +EVN + ++H NLI L+G + +V E GS
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGS 96
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L D L K + + R+ A+ VA G+ YL + ++H+D+++ N+LL K
Sbjct: 97 LLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVK 151
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT-G 518
+ +F +R+ + + + + APE ++ + DT+ FGV L E+ T G
Sbjct: 152 IGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 211
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+E +G +IL + + L P ++ + + + C A
Sbjct: 212 QEPWIGLNGSQIL-----------HKIDKEGERLPRP------EDCPQDIYNVMVQCWAH 254
Query: 579 EPESRPSMAEVVSTLMKIQ 597
+PE RP+ + L++ Q
Sbjct: 255 KPEDRPTFVALRDFLLEAQ 273
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 98
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 99 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 154
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
D+++ N ++ + K+ +F R + E Y + +MAPE ++ G+ T
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 214 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 256
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P+ RP+ E+V+ L
Sbjct: 257 CPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 30/248 (12%)
Query: 347 NGSTVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFME 396
G A+K +R+ + E +L+ H L L A + V E+
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L + H R F RF A ++ L YLH+ V++DI N++LDK+
Sbjct: 89 GGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLHS---RDVVYRDIKLENLMLDKDG 142
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F + + S ++ K GT Y+APE +E +D + GVV+ E++
Sbjct: 143 HIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 517 TGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ-----ANKKEIA 565
G+ Y QD E IL+ E F A++ L+ L+ DP + ++ KE+
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 566 HHLIMLCL 573
H L +
Sbjct: 260 EHRFFLSI 267
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 30/248 (12%)
Query: 347 NGSTVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFME 396
G A+K +R+ + E +L+ H L L A + V E+
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L + H R F RF A ++ L YLH+ V++DI N++LDK+
Sbjct: 89 GGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLHSRD---VVYRDIKLENLMLDKDG 142
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F + + S ++ K GT Y+APE +E +D + GVV+ E++
Sbjct: 143 HIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 517 TGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ-----ANKKEIA 565
G+ Y QD E IL+ E F A++ L+ L+ DP + ++ KE+
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 566 HHLIMLCL 573
H L +
Sbjct: 260 EHRFFLSI 267
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 30/252 (11%)
Query: 343 RGIINGSTVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVY 392
R G A+K +R+ + E +L+ H L L A + V
Sbjct: 30 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 89
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E+ G L + H R F RF A ++ L YLH+ V++DI N++L
Sbjct: 90 EYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLHSRD---VVYRDIKLENLML 143
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
DK+ K+ +F + + S ++ K GT Y+APE +E +D + GVV+
Sbjct: 144 DKDGHIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 200
Query: 513 LELITGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ-----ANK 561
E++ G+ Y QD E IL+ E F A++ L+ L+ DP + ++
Sbjct: 201 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 260
Query: 562 KEIAHHLIMLCL 573
KE+ H L +
Sbjct: 261 KEVMEHRFFLSI 272
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 339 GSVFRG--IINGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V+ + G VAI+ M + I E+ ++++ + N++N + +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93
Query: 390 LVYEFMENGSLSDWLHKKRYPEF-VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+V E++ GSL+D + + E ++ CR + L +LH+ +H+DI S
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSD 145
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
NILL + KL +F F E+S S VGT +MAPE + P++D ++
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 509 GVVLLELITGK 519
G++ +E+I G+
Sbjct: 203 GIMAIEMIEGE 213
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 62 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 121
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 122 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 178
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F R R Y A+ +M PE
Sbjct: 179 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-GYYRKGGCAMLPVKWMPPEAFME 237
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 238 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 284
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 285 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 339 GSVFRG--IINGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V+ + G VAI+ M + I E+ ++++ + N++N + +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93
Query: 390 LVYEFMENGSLSDWLHKKRYPEF-VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+V E++ GSL+D + + E ++ CR + L +LH+ +H+DI S
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSD 145
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
NILL + KL +F F E+S S VGT +MAPE + P++D ++
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 509 GVVLLELITGK 519
G++ +E+I G+
Sbjct: 203 GIMAIEMIEGE 213
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 339 GSVFRGIINGST-------VAIKCMRRSISK--------EVNLLKKINHFNLINLFGACE 383
G V+ G ++G VA+K + S+ E ++ K NH N++ G
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
+++ E M G L +L + R P ++ +A D+A G YL +
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 161
Query: 440 YVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+DI++ N LL AK+ +F + R S Y A+ +M PE
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA-SYYRKGGCAMLPVKWMPPEAFME 220
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPN 556
G+ T + DT++FGV+L E+ + Y + E + + GG +DP
Sbjct: 221 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGR--------MDP- 267
Query: 557 LQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
K + + C +PE RP+ A ++ +
Sbjct: 268 ----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 30/252 (11%)
Query: 343 RGIINGSTVAIKCMRRSI----------SKEVNLLKKINHFNLINLFGACEHDGVFYLVY 392
R G A+K +R+ + E +L+ H L L A + V
Sbjct: 25 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E+ G L + H R F RF A ++ L YLH+ V++DI N++L
Sbjct: 85 EYANGGEL--FFHLSRERVFTEERARFYGA-EIVSALEYLHS---RDVVYRDIKLENLML 138
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
DK+ K+ +F + + S ++ K GT Y+APE +E +D + GVV+
Sbjct: 139 DKDGHIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 513 LELITGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ-----ANK 561
E++ G+ Y QD E IL+ E F A++ L+ L+ DP + ++
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 562 KEIAHHLIMLCL 573
KE+ H L +
Sbjct: 256 KEVMEHRFFLSI 267
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
V E+ G L + H R F RF A ++ L YLH ++ V++D+ N
Sbjct: 87 FVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLEN 141
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
++LDK+ K+ +F + +++ + + K GT Y+APE +E +D + G
Sbjct: 142 LMLDKDGHIKITDFGLCKEGIKDGA---TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 198
Query: 510 VVLLELITGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ----- 558
VV+ E++ G+ Y QD E+ IL+ E F G A++ LS L+ DP +
Sbjct: 199 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 258
Query: 559 ANKKEIAHH 567
+ KEI H
Sbjct: 259 EDAKEIMQH 267
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
V E+ G L + H R F RF A ++ L YLH ++ V++D+ N
Sbjct: 85 FVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLEN 139
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
++LDK+ K+ +F + +++ + + K GT Y+APE +E +D + G
Sbjct: 140 LMLDKDGHIKITDFGLCKEGIKDGA---TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 196
Query: 510 VVLLELITGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ----- 558
VV+ E++ G+ Y QD E+ IL+ E F G A++ LS L+ DP +
Sbjct: 197 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 256
Query: 559 ANKKEIAHH 567
+ KEI H
Sbjct: 257 EDAKEIMQH 265
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 339 GSVFRG--IINGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V+ + G VAI+ M + I E+ ++++ + N++N + +
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 94
Query: 390 LVYEFMENGSLSDWLHKKRYPEF-VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+V E++ GSL+D + + E ++ CR + L +LH+ +H+DI S
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRDIKSD 146
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
NILL + KL +F F E+S S VGT +MAPE + P++D ++
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 509 GVVLLELITGK 519
G++ +E+I G+
Sbjct: 204 GIMAIEMIEGE 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 98
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 99 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 154
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
D+++ N ++ + K+ +F R + K + +MAPE ++ G+ T
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSS 213
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 214 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 256
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P+ RP+ E+V+ L
Sbjct: 257 CPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 341 VFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
VF G I ++ +K R +S E+++ + + H +++ G E + ++V E S
Sbjct: 44 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L + LHK+R R+ + + G YLH +H+D+ GN+ L+++L K
Sbjct: 104 LLE-LHKRRK-ALTEPEARYYLR-QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVK 157
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+ +F A + E KT GT Y+APE + + E+D ++ G ++ L+ GK
Sbjct: 158 IGDFGL---ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 38 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 97
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 98 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 153
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
D+++ N ++ + K+ +F R + E Y + +MAPE ++ G+ T
Sbjct: 154 DLAARNCMVAHDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 212
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 213 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 255
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P+ RP+ E+V+ L
Sbjct: 256 CPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 348 GSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMENG 398
G VA+K ++ R +E+ +LK + H N++ G C G L+ E++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL D+L + E + + + G+ YL Y+H+D+++ NIL++ R
Sbjct: 102 SLRDYLQA--HAERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRV 156
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
K+ +F + +++ + + APE + + D ++FGVVL EL T
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ +L +VH+D
Sbjct: 105 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKFL---ASKKFVHRD 159
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R + +E KT +MA E ++ T +
Sbjct: 160 LAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 219
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 220 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 266
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 267 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 341 VFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
VF G I ++ +K R +S E+++ + + H +++ G E + ++V E S
Sbjct: 48 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 107
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L + LHK+R R+ + + G YLH +H+D+ GN+ L+++L K
Sbjct: 108 LLE-LHKRRK-ALTEPEARYYLR-QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVK 161
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+ +F A + E KT GT Y+APE + + E+D ++ G ++ L+ GK
Sbjct: 162 IGDFGL---ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
V E+ G L + H R F RF A ++ L YLH ++ V++D+ N
Sbjct: 86 FVMEYANGGEL--FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLEN 140
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFG 509
++LDK+ K+ +F + +++ + + K GT Y+APE +E +D + G
Sbjct: 141 LMLDKDGHIKITDFGLCKEGIKDGA---TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 510 VVLLELITGKEAAYKQDGEE----ILLAEAVFSMVEGGNAEAKLSVLV--DPNLQ----- 558
VV+ E++ G+ Y QD E+ IL+ E F G A++ LS L+ DP +
Sbjct: 198 VVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 257
Query: 559 ANKKEIAHH 567
+ KEI H
Sbjct: 258 EDAKEIMQH 266
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 21/191 (10%)
Query: 339 GSVFRG--IINGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G+V+ + G VAI+ M + I E+ ++++ + N++N + +
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 94
Query: 390 LVYEFMENGSLSDWLHKKRYPEF-VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+V E++ GSL+D + + E ++ CR + L +LH+ +H++I S
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQ---VIHRNIKSD 146
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
NILL + KL +F F E+S S T VGT +MAPE + P++D ++
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRS---TMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 509 GVVLLELITGK 519
G++ +E+I G+
Sbjct: 204 GIMAIEMIEGE 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 121/252 (48%), Gaps = 30/252 (11%)
Query: 351 VAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VAIK ++ S+S+ E ++ ++H L+ L+G C +++ E+M NG L ++L
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
+ R+ F + + DV + YL + ++H+D+++ N L++ K+++F
Sbjct: 96 REMRH-RFQTQQL-LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 465 FVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYK 524
R + +E Y+S++ + + PE + Y + + D +AFGV++ E+ + + Y+
Sbjct: 151 LSRYVLDDE--YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
Query: 525 QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRP 584
+ F+ E A+ L P+L + K + + +C + + RP
Sbjct: 209 R-----------FTNSETAEHIAQGLRLYRPHLASEK------VYTIMYSCWHEKADERP 251
Query: 585 SMAEVVSTLMKI 596
+ ++S ++ +
Sbjct: 252 TFKILLSNILDV 263
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 36 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 95
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 96 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 151
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
D+++ N ++ + K+ +F R + K + +MAPE ++ G+ T
Sbjct: 152 DLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSS 210
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 211 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 253
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P+ RP+ E+V+ L
Sbjct: 254 CPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 341 VFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
VF G I ++ +K R +S E+++ + + H +++ G E + ++V E S
Sbjct: 44 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 103
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L + LHK+R R+ + + G YLH +H+D+ GN+ L+++L K
Sbjct: 104 LLE-LHKRRK-ALTEPEARYYLR-QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVK 157
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+ +F A + E KT GT Y+APE + + E+D ++ G ++ L+ GK
Sbjct: 158 IGDFGL---ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 56/278 (20%)
Query: 339 GSVFRGI--INGSTVAIKCMR---RSISKEVNLLKKINHFNLINLFGACEHDGV------ 387
G VF+ I+G T IK ++ +EV L K++H N+++ G DG
Sbjct: 25 GQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCW--DGFDYDPET 82
Query: 388 ------------FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNC 435
++ EF + G+L W+ K+R E + + + G+ Y+H+
Sbjct: 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHS- 140
Query: 436 TDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME 495
+++D+ NI L + K+ +F V ++++ + +K GT YM+PE +
Sbjct: 141 --KKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRXRSK---GTLRYMSPEQIS 194
Query: 496 YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
E+D YA G++L EL+ + A++ L + + S +
Sbjct: 195 SQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI--------------- 239
Query: 556 NLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+KKE L ++++PE RP+ +E++ TL
Sbjct: 240 ---FDKKEKT-----LLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 335 NMIDGSVFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
+M VF G + ++ +K + +S E+ + K +++ +++ G E D Y+V E
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
SL + LHK+R R+ + + G+ YLHN +H+D+ GN+ L+
Sbjct: 123 ICRRRSLLE-LHKRRK-AVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLN 176
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLL 513
++ K+ +F A + E KT GT Y+APE + + E+D ++ G +L
Sbjct: 177 DDMDVKIGDFGL---ATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 514 ELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCL 573
L+ GK E L E ++ N+ + H+ +
Sbjct: 234 TLLVGKPPF-----ETSCLKETYI------------------RIKKNEYSVPRHINPVAS 270
Query: 574 ACIAR----EPESRPSMAEVVS 591
A I R +P RPS+AE+++
Sbjct: 271 ALIRRMLHADPTLRPSVAELLT 292
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 98
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 99 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 154
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
D+++ N ++ + K+ +F R + K + +MAPE ++ G+ T
Sbjct: 155 DLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSS 213
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 214 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 256
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P RP+ E+V+ L
Sbjct: 257 CPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 375 LINLFGACEHDGVFYLVYEFMENGSLSDWLHK--KRYPEFVS--WNCRFRIALDVAHGLH 430
+ L A + D YLV ++ G L L K R PE ++ + IA+D H LH
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
Y VH+DI NIL+D N +LA+F + E G + AVGT Y++
Sbjct: 196 Y---------VHRDIKPDNILMDMNGHIRLADFGSCLKLM--EDGTVQSSVAVGTPDYIS 244
Query: 491 PEYMEY-----GLVTPEMDTYAFGVVLLELITGKEAAYKQ 525
PE ++ G PE D ++ GV + E++ G+ Y +
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ +L +VH+D
Sbjct: 102 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKFL---ASKKFVHRD 156
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R +E KT +MA E ++ T +
Sbjct: 157 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 216
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 217 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 263
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 264 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 339 GSVFRGIINGS--TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G VF+GI N + VAIK + I +E+ +L + + + +G+ D
Sbjct: 41 GEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL 100
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+++ E++ GS D L P + I ++ GL YLH+ +H+DI +
Sbjct: 101 WIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 153
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
N+LL ++ KLA+F + T VGT +MAPE ++ + D ++
Sbjct: 154 NVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 210
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHL 568
G+ +EL G E + + L V ++ N P L+ N + L
Sbjct: 211 GITAIELARG-EPPHSE-----LHPMKVLFLIPKNNP---------PTLEGN---YSKPL 252
Query: 569 IMLCLACIAREPESRPSMAEVV 590
AC+ +EP RP+ E++
Sbjct: 253 KEFVEACLNKEPSFRPTAKELL 274
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ +L +VH+D
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKFL---ASKKFVHRD 158
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R +E KT +MA E ++ T +
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 219 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 265
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 266 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 339 GSVFRGIINGS--TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G VF+GI N + VAIK + I +E+ +L + + + +G+ D
Sbjct: 21 GEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL 80
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+++ E++ GS D L P + I ++ GL YLH+ +H+DI +
Sbjct: 81 WIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
N+LL ++ KLA+F + T VGT +MAPE ++ + D ++
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHL 568
G+ +EL G E + + L V ++ N P L+ N + L
Sbjct: 191 GITAIELARG-EPPHSE-----LHPMKVLFLIPKNNP---------PTLEGN---YSKPL 232
Query: 569 IMLCLACIAREPESRPSMAEVV 590
AC+ +EP RP+ E++
Sbjct: 233 KEFVEACLNKEPSFRPTAKELL 254
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 49 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ +L +VH+D
Sbjct: 109 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKFL---ASKKFVHRD 163
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R +E KT +MA E ++ T +
Sbjct: 164 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 223
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 224 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 270
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 271 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ +L +VH+D
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKFL---ASKKFVHRD 158
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R +E KT +MA E ++ T +
Sbjct: 159 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 218
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 219 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 265
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 266 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ +L +VH+D
Sbjct: 163 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKFL---ASKKFVHRD 217
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R +E KT +MA E ++ T +
Sbjct: 218 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 277
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 278 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 324
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 325 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFGAC-EH 384
G V+ G +++ I C +S+++ E ++K +H N+++L G C
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G +V +M++G L +++ + + V F L VA G+ +L +VH+D
Sbjct: 105 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--GLQVAKGMKFL---ASKKFVHRD 159
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTN-GYMAPEYMEYGLVTPEM 503
+++ N +LD+ K+A+F R +E KT +MA E ++ T +
Sbjct: 160 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 219
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGV+L EL+T Y ++ + +++G L+ P +
Sbjct: 220 DVWSFGVLLWELMTRGAPPY----PDVNTFDITVYLLQGRR-------LLQPEYCPDP-- 266
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
L + L C + E RPS +E+VS + I
Sbjct: 267 ----LYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 348 GSTVAIKCMRR--------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
G A+KC+ + SI E+ +L+KI H N++ L E YLV + + G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNL 456
L D + +K + + R LD + LH + G VH+D+ N+L D+
Sbjct: 107 LFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM------GIVHRDLKPENLLYYSQDEES 160
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
+ +++F + E TA GT GY+APE + + +D ++ GV+ L+
Sbjct: 161 KIMISDFGLSKM----EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 517 TGKEAAYKQDG----EEILLAEAVF 537
G Y ++ E+IL AE F
Sbjct: 217 CGYPPFYDENDSKLFEQILKAEYEF 241
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 347 NGSTVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFME 396
G VA+K + R +E+++L+ + H ++I G CE G LV E++
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
GSL D+L + + A + G+ YLH+ Y+H+++++ N+LLD +
Sbjct: 102 LGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDR 154
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F ++ Y + + APE ++ D ++FGV L EL+
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 517 T 517
T
Sbjct: 215 T 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 65/289 (22%)
Query: 339 GSVFRGI--INGSTVAIKCMR---RSISKEVNLLKKINHFNLINLFG------------- 380
G VF+ I+G T I+ ++ +EV L K++H N+++ G
Sbjct: 26 GQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSD 85
Query: 381 ----ACEHD------------GVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALD 424
+ ++D ++ EF + G+L W+ K+R E + +
Sbjct: 86 DSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQ 144
Query: 425 VAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVG 484
+ G+ Y+H+ +H+D+ NI L + K+ +F V ++++ + + +K G
Sbjct: 145 ITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRTRSK---G 197
Query: 485 TNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGN 544
T YM+PE + E+D YA G++L EL+ + A++ L + + S +
Sbjct: 198 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI---- 253
Query: 545 AEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+KKE L ++++PE RP+ +E++ TL
Sbjct: 254 --------------FDKKEKT-----LLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 106 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 157
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEE 529
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+ D +E
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 347 NGSTVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFME 396
G VA+K + R +E+++L+ + H ++I G CE G LV E++
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
GSL D+L + + A + G+ YLH Y+H+++++ N+LLD +
Sbjct: 102 LGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDR 154
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F ++ Y + + APE ++ D ++FGV L EL+
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 517 T 517
T
Sbjct: 215 T 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 341 VFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
VF G I ++ +K R +S E+++ + + H +++ G E + ++V E S
Sbjct: 66 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 125
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L + LHK+R R+ + + G YLH +H+D+ GN+ L+++L K
Sbjct: 126 LLE-LHKRRK-ALTEPEARYYLR-QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVK 179
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+ +F A + E K GT Y+APE + + E+D ++ G ++ L+ GK
Sbjct: 180 IGDFGL---ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 339 GSVF--RGIINGSTVAIK---------CMRRSISKEVNLLKKINHFNLINLFGACEHDGV 387
G VF R G VAIK +++ +E+ +LK++ H NL+NL
Sbjct: 17 GVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR 76
Query: 388 FYLVYEFMENGSLSDWLHKKR-YPEFVSWNCRFRI--ALDVAHGLHYLHNCTDPGYVHKD 444
+LV+E+ ++ L + +R PE + + ++ A++ H HNC +H+D
Sbjct: 77 LHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK----HNC-----IHRD 127
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM----EYGLVT 500
+ NIL+ K+ KL +F F R Y V T Y +PE + +YG
Sbjct: 128 VKPENILITKHSVIKLCDFGFARLLTGPSDYYDD---EVATRWYRSPELLVGDTQYG--- 181
Query: 501 PEMDTYAFGVVLLELITG 518
P +D +A G V EL++G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 36/192 (18%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGV------FYLV 391
G+ VAIK + R +E+ LLK + H N+I L D FYLV
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
FM H+K + + + + + GL Y+H G +H+D+ GN+
Sbjct: 109 MPFMGTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIHAA---GIIHRDLKPGNLA 160
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE----YMEYGLVTPEMDTYA 507
++++ K+ +F R A E G V T Y APE +M Y T +D ++
Sbjct: 161 VNEDCELKILDFGLARQADSEMXG------XVVTRWYRAPEVILNWMRY---TQTVDIWS 211
Query: 508 FGVVLLELITGK 519
G ++ E+ITGK
Sbjct: 212 VGCIMAEMITGK 223
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 124/265 (46%), Gaps = 31/265 (11%)
Query: 339 GSVFRGIINGS-TVAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V G G VAIK ++ S+S+ E ++ ++H L+ L+G C +++
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
E+M NG L ++L + R+ F + + DV + YL + ++H+D+++ N L
Sbjct: 78 TEYMANGCLLNYLREMRH-RFQTQQL-LEMCKDVCEAMEYLES---KQFLHRDLAARNCL 132
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVV 511
++ K+++F R + +E Y+S+ + + PE + Y + + D +AFGV+
Sbjct: 133 VNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 190
Query: 512 LLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIML 571
+ E+ + + Y++ F+ E A+ L P+L + K + +
Sbjct: 191 MWEIYSLGKMPYER-----------FTNSETAEHIAQGLRLYRPHLASEK------VYTI 233
Query: 572 CLACIAREPESRPSMAEVVSTLMKI 596
+C + + RP+ ++S ++ +
Sbjct: 234 MYSCWHEKADERPTFKILLSNILDV 258
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 43/271 (15%)
Query: 339 GSVFRGIINGS-TVAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLV 391
G V G G VAIK ++ S+S+ E ++ ++H L+ L+G C +++
Sbjct: 22 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 81
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFR------IALDVAHGLHYLHNCTDPGYVHKDI 445
E+M NG L ++L + R+ RF+ + DV + YL + ++H+D+
Sbjct: 82 TEYMANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 130
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
++ N L++ K+++F R + +E Y+S+ + + PE + Y + + D
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 506 YAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIA 565
+AFGV++ E+ + + Y++ F+ E A+ L P+L + K
Sbjct: 189 WAFGVLMWEIYSLGKMPYER-----------FTNSETAEHIAQGLRLYRPHLASEK---- 233
Query: 566 HHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
+ + +C + + RP+ ++S ++ +
Sbjct: 234 --VYTIMYSCWHEKADERPTFKILLSNILDV 262
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 341 VFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGS 399
VF G I ++ +K R +S E+++ + + H +++ G E + ++V E S
Sbjct: 68 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 127
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
L + LHK+R R+ + + G YLH +H+D+ GN+ L+++L K
Sbjct: 128 LLE-LHKRRK-ALTEPEARYYLR-QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVK 181
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+ +F A + E K GT Y+APE + + E+D ++ G ++ L+ GK
Sbjct: 182 IGDFGL---ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 120/252 (47%), Gaps = 30/252 (11%)
Query: 351 VAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VAIK ++ S+S+ E ++ ++H L+ L+G C +++ E+M NG L ++L
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
+ R+ F + + DV + YL + ++H+D+++ N L++ K+++F
Sbjct: 111 REMRH-RFQTQQL-LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 465 FVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYK 524
R + +E Y+S+ + + PE + Y + + D +AFGV++ E+ + + Y+
Sbjct: 166 LSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
Query: 525 QDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRP 584
+ F+ E A+ L P+L + K + + +C + + RP
Sbjct: 224 R-----------FTNSETAEHIAQGLRLYRPHLASEK------VYTIMYSCWHEKADERP 266
Query: 585 SMAEVVSTLMKI 596
+ ++S ++ +
Sbjct: 267 TFKILLSNILDV 278
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 121/258 (46%), Gaps = 42/258 (16%)
Query: 351 VAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VAIK ++ S+S+ E ++ ++H L+ L+G C +++ E+M NG L ++L
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Query: 405 HKKRYPEFVSWNCRFR------IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
+ R+ RF+ + DV + YL + ++H+D+++ N L++
Sbjct: 96 REMRH--------RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 144
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K+++F R + +E Y+S+ + + PE + Y + + D +AFGV++ E+ +
Sbjct: 145 KVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 202
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+ Y++ F+ E A+ L P+L + K + + +C
Sbjct: 203 GKMPYER-----------FTNSETAEHIAQGLRLYRPHLASEK------VYTIMYSCWHE 245
Query: 579 EPESRPSMAEVVSTLMKI 596
+ + RP+ ++S ++ +
Sbjct: 246 KADERPTFKILLSNILDV 263
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 39 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 98
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 99 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 154
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
++++ N ++ + K+ +F R + E Y + +MAPE ++ G+ T
Sbjct: 155 NLAARNCMVAHDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 214 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 256
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P RP+ E+V+ L
Sbjct: 257 CPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 54/279 (19%)
Query: 343 RGIINGSTVAIKCMRRSISK----------EVNLLKKINHFNLINLFGACEHDG----VF 388
R + + VA+K +R +++ E +NH ++ ++ E + +
Sbjct: 32 RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91
Query: 389 YLVYEFMENGSLSDWLH------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVH 442
Y+V E+++ +L D +H KR E ++ C+ L++ H G +H
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ---------ALNFSHQN---GIIH 139
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA--VGTNGYMAPEYMEYGLVT 500
+D+ NI++ K+ +F R+ +SG S T+TA +GT Y++PE V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 501 PEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQAN 560
D Y+ G VL E++TG E + D + + A V DP +
Sbjct: 198 ARSDVYSLGCVLYEVLTG-EPPFTGDSPDSV---------------AYQHVREDPIPPSA 241
Query: 561 KKE-IAHHLIMLCLACIAREPESR-PSMAEVVSTLMKIQ 597
+ E ++ L + L +A+ PE+R + AE+ + L+++
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 37/192 (19%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLF------GACEHDGVFYLV 391
+G VAIK + R +E+ LLK + H N+I L + + FYLV
Sbjct: 66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
FM+ L K EF ++ + + GL Y+H+ G VH+D+ GN+
Sbjct: 126 MPFMQTD-----LQKIMGMEFSEEKIQY-LVYQMLKGLKYIHSA---GVVHRDLKPGNLA 176
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE----YMEYGLVTPEMDTYA 507
++++ K+ +F R A E +GY V T Y APE +M Y +D ++
Sbjct: 177 VNEDCELKILDFGLARHADAEMTGY------VVTRWYRAPEVILSWMHYNQT---VDIWS 227
Query: 508 FGVVLLELITGK 519
G ++ E++TGK
Sbjct: 228 VGCIMAEMLTGK 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 35/204 (17%)
Query: 339 GSVFRG--IINGSTVAIKCM------RRSISKEVNLLKKINHF-NLINLFGAC------E 383
G V++G + G AIK M I +E+N+LKK +H N+ +GA
Sbjct: 38 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97
Query: 384 HDGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPG 439
D +LV EF GS++D + + E++++ CR ++ GL +LH
Sbjct: 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR-----EILRGLSHLHQHK--- 149
Query: 440 YVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EY 496
+H+DI N+LL +N KL +F + + + T +GT +MAPE + E
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGV---SAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 206
Query: 497 GLVTPEM--DTYAFGVVLLELITG 518
T + D ++ G+ +E+ G
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 41/270 (15%)
Query: 343 RGIING---STVAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHDGVFYLV 391
R II G + VA+K + S S E +++K +++ L G +V
Sbjct: 40 RDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 99
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCR--------FRIALDVAHGLHYLHNCTDPGYVHK 443
E M +G L +L R PE + R ++A ++A G+ YL+ +VH+
Sbjct: 100 MELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHR 155
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
++++ N ++ + K+ +F R + E Y + +MAPE ++ G+ T
Sbjct: 156 NLAARNCMVAHDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 214
Query: 504 DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE 563
D ++FGVVL E+ + E Y +G + E L ++D
Sbjct: 215 DMWSFGVVLWEITSLAEQPY-----------------QGLSNEQVLKFVMDGGYLDQPDN 257
Query: 564 IAHHLIMLCLACIAREPESRPSMAEVVSTL 593
+ L C P RP+ E+V+ L
Sbjct: 258 CPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 340 SVFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENG 398
VF G I ++ +K R +S E+++ + + H +++ G E + ++V E
Sbjct: 41 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 100
Query: 399 SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
SL + LHK+R R+ + + G YLH +H+D+ GN+ L+++L
Sbjct: 101 SLLE-LHKRRK-ALTEPEARYYLR-QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEV 154
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K+ +F A + E K GT Y+APE + + E+D ++ G ++ L+ G
Sbjct: 155 KIGDFGL---ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
Query: 519 K 519
K
Sbjct: 212 K 212
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 37/262 (14%)
Query: 335 NMIDGSVFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
+M VF G + ++ +K + +S E+ + K +++ +++ G E D Y+V E
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
SL + LHK+R R+ + + G+ YLHN +H+D+ GN+ L+
Sbjct: 123 ICRRRSLLE-LHKRRK-AVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLN 176
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLL 513
++ K+ +F A + E K GT Y+APE + + E+D ++ G +L
Sbjct: 177 DDMDVKIGDFGL---ATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 514 ELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCL 573
L+ GK E L E ++ N+ + H+ +
Sbjct: 234 TLLVGKPPF-----ETSCLKETYI------------------RIKKNEYSVPRHINPVAS 270
Query: 574 ACIAR----EPESRPSMAEVVS 591
A I R +P RPS+AE+++
Sbjct: 271 ALIRRMLHADPTLRPSVAELLT 292
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 127/280 (45%), Gaps = 38/280 (13%)
Query: 281 HKRRRDEAARKDG---------KREKKRNLPEDFLVSVSNL-------DRGLKFYKYEDL 324
H +RR + DG +K R +P D V S D+ L F K ++L
Sbjct: 279 HPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKL-FLKRDNL 337
Query: 325 VVATENFSPKNMIDGSVFRGIINGST----VAIKCMRRSISK--------EVNLLKKINH 372
++A N GSV +G+ VAIK +++ K E ++ ++++
Sbjct: 338 LIADIELGCGNF--GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 395
Query: 373 FNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYL 432
++ L G C+ + + LV E G L +L KR E + + + V+ G+ YL
Sbjct: 396 PYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYL 452
Query: 433 HNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE 492
+ +VH+++++ N+LL AK+++F ++ ++S Y++ + APE
Sbjct: 453 E---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
Query: 493 YMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQ-DGEEIL 531
+ + + D +++GV + E ++ + YK+ G E++
Sbjct: 510 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 549
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 121/258 (46%), Gaps = 42/258 (16%)
Query: 351 VAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VAIK ++ S+S+ E ++ ++H L+ L+G C +++ E+M NG L ++L
Sbjct: 42 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 101
Query: 405 HKKRYPEFVSWNCRFR------IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
+ R+ RF+ + DV + YL + ++H+D+++ N L++
Sbjct: 102 REMRH--------RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 150
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K+++F R + +E Y+S+ + + PE + Y + + D +AFGV++ E+ +
Sbjct: 151 KVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 208
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAR 578
+ Y++ F+ E A+ L P+L + K + + +C
Sbjct: 209 GKMPYER-----------FTNSETAEHIAQGLRLYRPHLASEK------VYTIMYSCWHE 251
Query: 579 EPESRPSMAEVVSTLMKI 596
+ + RP+ ++S ++ +
Sbjct: 252 KADERPTFKILLSNILDV 269
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + + + H N++ L + +G YL+++ + G L D
Sbjct: 54 IINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI 112
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA---KL 460
+ ++ Y E + +C +I V H C G VH+D+ N+LL L+ KL
Sbjct: 113 VAREYYSEADASHCIQQILEAVLH-------CHQMGVVHRDLKPENLLLASKLKGAAVKL 165
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F A+ E + GT GY++PE + +D +A GV+L L+ G
Sbjct: 166 ADFGL---AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP 222
Query: 521 AAYKQD 526
+ +D
Sbjct: 223 PFWDED 228
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 37/262 (14%)
Query: 335 NMIDGSVFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
+M VF G + ++ +K + +S E+ + K +++ +++ G E D Y+V E
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
SL + LHK+R R+ + + G+ YLHN +H+D+ GN+ L+
Sbjct: 123 ICRRRSLLE-LHKRRK-AVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLN 176
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLL 513
++ K+ +F A + E K GT Y+APE + + E+D ++ G +L
Sbjct: 177 DDMDVKIGDFGL---ATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 233
Query: 514 ELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCL 573
L+ GK E L E ++ N+ + H+ +
Sbjct: 234 TLLVGKPPF-----ETSCLKETYI------------------RIKKNEYSVPRHINPVAS 270
Query: 574 ACIAR----EPESRPSMAEVVS 591
A I R +P RPS+AE+++
Sbjct: 271 ALIRRMLHADPTLRPSVAELLT 292
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 37/262 (14%)
Query: 335 NMIDGSVFRGIINGSTVAIKC-MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
+M VF G + ++ +K + +S E+ + K +++ +++ G E D Y+V E
Sbjct: 47 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 106
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
SL + LHK+R R+ + + G+ YLHN +H+D+ GN+ L+
Sbjct: 107 ICRRRSLLE-LHKRRK-AVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLN 160
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLL 513
++ K+ +F A + E K GT Y+APE + + E+D ++ G +L
Sbjct: 161 DDMDVKIGDFGL---ATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 217
Query: 514 ELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCL 573
L+ GK E L E ++ N+ + H+ +
Sbjct: 218 TLLVGKPPF-----ETSCLKETYI------------------RIKKNEYSVPRHINPVAS 254
Query: 574 ACIAR----EPESRPSMAEVVS 591
A I R +P RPS+AE+++
Sbjct: 255 ALIRRMLHADPTLRPSVAELLT 276
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 38/262 (14%)
Query: 339 GSVFRGIINGS--TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G VF+GI N + VAIK + I +E+ +L + + + +G+ D
Sbjct: 36 GEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL 95
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+++ E++ GS D L P + I ++ GL YLH+ +H+DI +
Sbjct: 96 WIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 148
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
N+LL ++ KLA+F + VGT +MAPE ++ + D ++
Sbjct: 149 NVLLSEHGEVKLADFGVAGQLTDTQI---KRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 205
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHL 568
G+ +EL G E + + L V ++ N P L+ N + L
Sbjct: 206 GITAIELARG-EPPHSE-----LHPMKVLFLIPKNNP---------PTLEGN---YSKPL 247
Query: 569 IMLCLACIAREPESRPSMAEVV 590
AC+ +EP RP+ E++
Sbjct: 248 KEFVEACLNKEPSFRPTAKELL 269
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 346 INGSTVAIKCMRRS-------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENG 398
+ G A+KC+++S + E+ +LKKI H N++ L E +YLV + + G
Sbjct: 32 LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGG 91
Query: 399 SLSD-WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DK 454
L D L + Y E + V + YLH + G VH+D+ N+L ++
Sbjct: 92 ELFDRILERGVYTE----KDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEE 144
Query: 455 NLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLE 514
N + + +F + E++G S TA GT GY+APE + + +D ++ GV+
Sbjct: 145 NSKIMITDFGLSK---MEQNGIMS--TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYI 199
Query: 515 LITGKEAAYKQ 525
L+ G Y++
Sbjct: 200 LLCGYPPFYEE 210
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 56/276 (20%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K + R ++ E+ +L + NH N++NL GAC G ++ E+ G L
Sbjct: 73 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 132
Query: 401 SDWLHKKRYPEFVSWNCRFRI----------------ALDVAHGLHYL--HNCTDPGYVH 442
++L +KR F+ I + VA G+ +L NC +H
Sbjct: 133 LNFLRRKR-DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-----IH 186
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+++ NILL K+ +F R ++ +S Y A +MAPE + + T E
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARD-IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 245
Query: 503 MDTYAFGVVLLELITGKEAAYKQ---DGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQA 559
D +++G+ L EL + + Y D + + + F M+ +A A++ ++
Sbjct: 246 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK----- 300
Query: 560 NKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
C +P RP+ ++V + K
Sbjct: 301 --------------TCWDADPLKRPTFKQIVQLIEK 322
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 56/276 (20%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K + R ++ E+ +L + NH N++NL GAC G ++ E+ G L
Sbjct: 55 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114
Query: 401 SDWLHKKRYPEFVSWNCRFRI----------------ALDVAHGLHYL--HNCTDPGYVH 442
++L +KR F+ I + VA G+ +L NC +H
Sbjct: 115 LNFLRRKR-DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-----IH 168
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+++ NILL K+ +F R ++ +S Y A +MAPE + + T E
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARD-IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 227
Query: 503 MDTYAFGVVLLELITGKEAAYKQ---DGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQA 559
D +++G+ L EL + + Y D + + + F M+ +A A++ ++
Sbjct: 228 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK----- 282
Query: 560 NKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
C +P RP+ ++V + K
Sbjct: 283 --------------TCWDADPLKRPTFKQIVQLIEK 304
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 329 ENFSPKNMIDGSVFRGII------NGSTVAIKC----------MRRSISKEVNLLKKINH 372
E+F N++ F G+ G VAIK M + + EV + ++ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 373 FNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYL 432
+++ L+ E YLV E NG ++ +L K R F R + G+ YL
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEAR-HFMHQIITGMLYL 128
Query: 433 HNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE 492
H+ G +H+D++ N+LL +N+ K+A+F A + + + T GT Y++PE
Sbjct: 129 HS---HGILHRDLTLSNLLLTRNMNIKIADFGL---ATQLKMPHEKHYTLCGTPNYISPE 182
Query: 493 YMEYGLVTPEMDTYAFGVVLLELITGK 519
E D ++ G + L+ G+
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 56/276 (20%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K + R ++ E+ +L + NH N++NL GAC G ++ E+ G L
Sbjct: 78 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 401 SDWLHKKRYPEFVSWNCRFRI----------------ALDVAHGLHYL--HNCTDPGYVH 442
++L +KR F+ I + VA G+ +L NC +H
Sbjct: 138 LNFLRRKR-DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-----IH 191
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+++ NILL K+ +F R ++ +S Y A +MAPE + + T E
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARD-IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 503 MDTYAFGVVLLELITGKEAAYKQ---DGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQA 559
D +++G+ L EL + + Y D + + + F M+ +A A++ ++
Sbjct: 251 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK----- 305
Query: 560 NKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
C +P RP+ ++V + K
Sbjct: 306 --------------TCWDADPLKRPTFKQIVQLIEK 327
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + + + H N++ L + +G YLV++ + G L D
Sbjct: 36 IINTKKLSARDHQK-LEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI 94
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD---KNLRAKL 460
+ ++ Y E + +C +I V H C G VH+D+ N+LL K KL
Sbjct: 95 VAREYYSEADASHCIQQILEAVLH-------CHQMGVVHRDLKPENLLLASKCKGAAVKL 147
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F A+ + + GT GY++PE + +D +A GV+L L+ G
Sbjct: 148 ADFGL---AIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYP 204
Query: 521 AAYKQDGEEI 530
+ +D ++
Sbjct: 205 PFWDEDQHKL 214
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 339 GSVFRGII--NGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++GI G TV AIK + + + N ++ ++H +L+ L G C
Sbjct: 29 GTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS 88
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+ LV + M +G L +++H+ + + + + +A G+ YL VH+D
Sbjct: 89 PTI-QLVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRD 142
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F R +E Y++ + +MA E + Y T + D
Sbjct: 143 LAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK-WMALECIHYRKFTHQSD 201
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + + ++E G L P +
Sbjct: 202 VWSYGVTIWELMTFGGKPY--DG---IPTREIPDLLEKGER------LPQPPI------C 244
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E+ + ++ D QR
Sbjct: 245 TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQR 282
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 38/262 (14%)
Query: 339 GSVFRGIINGS--TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G VF+GI N + VAIK + I +E+ +L + + + +G+ D
Sbjct: 21 GEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL 80
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+++ E++ GS D L P + I ++ GL YLH+ +H+DI +
Sbjct: 81 WIIMEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
N+LL ++ KLA+F + VGT +MAPE ++ + D ++
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQI---KRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHL 568
G+ +EL G E + + L V ++ N P L+ N + L
Sbjct: 191 GITAIELARG-EPPHSE-----LHPMKVLFLIPKNNP---------PTLEGN---YSKPL 232
Query: 569 IMLCLACIAREPESRPSMAEVV 590
AC+ +EP RP+ E++
Sbjct: 233 KEFVEACLNKEPSFRPTAKELL 254
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 56/276 (20%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K + R ++ E+ +L + NH N++NL GAC G ++ E+ G L
Sbjct: 71 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 130
Query: 401 SDWLHKKRYPEFVSWNCRFRI----------------ALDVAHGLHYL--HNCTDPGYVH 442
++L +KR F+ I + VA G+ +L NC +H
Sbjct: 131 LNFLRRKR-DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-----IH 184
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+++ NILL K+ +F R ++ +S Y A +MAPE + + T E
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARD-IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 243
Query: 503 MDTYAFGVVLLELITGKEAAYKQ---DGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQA 559
D +++G+ L EL + + Y D + + + F M+ +A A++ ++
Sbjct: 244 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK----- 298
Query: 560 NKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
C +P RP+ ++V + K
Sbjct: 299 --------------TCWDADPLKRPTFKQIVQLIEK 320
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 21/191 (10%)
Query: 339 GSVFRGI--INGSTVAIKCMR-----RSISKEVNLLKKINHFNLINLFGACEHDGVFYLV 391
GSV++ I G VAIK + + I KE++++++ + +++ +G+ + ++V
Sbjct: 43 GSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
E+ GS+SD + + + ++ + I GL YLH +H+DI +GNIL
Sbjct: 103 MEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNIL 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME---YGLVTPEMDTYAF 508
L+ AKLA+F A + + +GT +MAPE ++ Y V D ++
Sbjct: 158 LNTEGHAKLADFGV---AGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA---DIWSL 211
Query: 509 GVVLLELITGK 519
G+ +E+ GK
Sbjct: 212 GITAIEMAEGK 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 347 NGSTVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFME 396
G VA+K + R +E+ +L+ + H +++ G CE G LV E++
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
GSL D+L + V A + G+ YLH Y+H+ +++ N+LLD +
Sbjct: 97 LGSLRDYLPR----HCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDR 149
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F ++ Y + + APE ++ D ++FGV L EL+
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 517 T 517
T
Sbjct: 210 T 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 65 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 124
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F +
Sbjct: 125 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 176
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
S + VGT YM+PE ++ + + D ++ G+ L+E+ G+
Sbjct: 177 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 61/308 (19%)
Query: 311 NLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMR---------RSIS 361
N G+ F + L EN S G +++G G+ + +K ++ R +
Sbjct: 2 NKHSGIDFKQLNFLTKLNENHS------GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFN 55
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFY--LVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+E L+ +H N++ + GAC+ + L+ +M GSL + LH+ V +
Sbjct: 56 EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-FVVDQSQAV 114
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA----NFSFVRSAVREESG 475
+ ALD+A G+ +LH +P ++S ++++D+++ A+++ FSF
Sbjct: 115 KFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSF---------- 163
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPE------MDTYAFGVVLLELITGKEAAYKQDGEE 529
+ + ++APE ++ PE D ++F V+L EL+T E
Sbjct: 164 --QSPGRMYAPAWVAPEALQK---KPEDTNRRSADMWSFAVLLWELVT----------RE 208
Query: 530 ILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
+ A+ N E + V ++ I+ H+ L C+ +P RP +
Sbjct: 209 VPFADL-------SNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMI 261
Query: 590 VSTLMKIQ 597
V L K+Q
Sbjct: 262 VPILEKMQ 269
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 347 NGSTVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFME 396
G VA+K + R +E+ +L+ + H +++ G CE G LV E++
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
GSL D+L + V A + G+ YLH Y+H+ +++ N+LLD +
Sbjct: 96 LGSLRDYLPR----HCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDR 148
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
K+ +F ++ Y + + APE ++ D ++FGV L EL+
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 517 T 517
T
Sbjct: 209 T 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 339 GSVFRGII--NGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++GI G TV AIK + + + N ++ ++H +L+ L G C
Sbjct: 52 GTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS 111
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+ LV + M +G L +++H+ + + + + +A G+ YL VH+D
Sbjct: 112 PTI-QLVTQLMPHGCLLEYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRD 165
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F R +E Y++ + +MA E + Y T + D
Sbjct: 166 LAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK-WMALECIHYRKFTHQSD 224
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + + ++E G L P +
Sbjct: 225 VWSYGVTIWELMTFGGKPY--DG---IPTREIPDLLEKGER------LPQPPI------C 267
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E+ + ++ D QR
Sbjct: 268 TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQR 305
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 56/276 (20%)
Query: 350 TVAIKCM--------RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSL 400
TVA+K + R ++ E+ +L + NH N++NL GAC G ++ E+ G L
Sbjct: 78 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 401 SDWLHKKRYPEFVSWNCRFRI----------------ALDVAHGLHYL--HNCTDPGYVH 442
++L +KR F+ I + VA G+ +L NC +H
Sbjct: 138 LNFLRRKR-DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-----IH 191
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+++ NILL K+ +F R ++ +S Y A +MAPE + + T E
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARH-IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 503 MDTYAFGVVLLELITGKEAAYKQ---DGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQA 559
D +++G+ L EL + + Y D + + + F M+ +A A++ ++
Sbjct: 251 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK----- 305
Query: 560 NKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
C +P RP+ ++V + K
Sbjct: 306 --------------TCWDADPLKRPTFKQIVQLIEK 327
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 345 IINGSTVAIKCMRRSISKEVN-LLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDW 403
++ + K + I E N LLK + H L+ L + + Y V +++ G L +
Sbjct: 70 VLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--F 127
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
H +R F+ RF A ++A L YLH+ V++D+ NILLD L +F
Sbjct: 128 YHLQRERCFLEPRARFYAA-EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDF 183
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAY 523
+ + S +T T GT Y+APE + +D + G VL E++ G Y
Sbjct: 184 GLCKENIEHNS---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240
Query: 524 KQDGEEI 530
++ E+
Sbjct: 241 SRNTAEM 247
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 318 FYKYEDLVVATENFSPKNMIDGSVFRGIINGST----VAIKCMRRSISK--------EVN 365
F K ++L++A N GSV +G+ VAIK +++ K E
Sbjct: 5 FLKRDNLLIADIELGCGNF--GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 62
Query: 366 LLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDV 425
++ ++++ ++ L G C+ + + LV E G L +L KR E + + + V
Sbjct: 63 IMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQV 119
Query: 426 AHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGT 485
+ G+ YL + +VH+D+++ N+LL AK+++F ++ ++S Y++
Sbjct: 120 SMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 176
Query: 486 NGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQ-DGEEIL 531
+ APE + + + D +++GV + E ++ + YK+ G E++
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYPEFV 413
+R I +E+ +L + N ++ +GA DG + E M+ GSL L K R PE +
Sbjct: 49 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI 108
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREE 473
++++ V GL YL +H+D+ NIL++ KL +F + E
Sbjct: 109 LG----KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM 162
Query: 474 SGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+ VGT YM+PE ++ + + D ++ G+ L+E+ G+
Sbjct: 163 A-----NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + +K+ H N++ L + + + YLV++ + G L D
Sbjct: 38 IINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKL 460
+ ++ Y E + +C +I +A+ C G VH+++ N+LL K KL
Sbjct: 97 VAREFYSEADASHCIQQILESIAY-------CHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F E+ + GT GY++PE ++ + +D +A GV+L L+ G
Sbjct: 150 ADFGLAIEVNDSEAWHGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 521 AAYKQD 526
+ +D
Sbjct: 206 PFWDED 211
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 346 INGSTVAIKCMRRS----------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFM 395
+ G VA+K + R I +E+ LK H ++I L+ ++V E++
Sbjct: 39 LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98
Query: 396 ENGSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK 454
G L D++ K R E S R+ + G+ Y H VH+D+ N+LLD
Sbjct: 99 SGGELFDYICKNGRLDEKESR----RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDA 151
Query: 455 NLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVT-PEMDTYAFGVVLL 513
++ AK+A+F S + + + + + G+ Y APE + L PE+D ++ GV+L
Sbjct: 152 HMNAKIADFGL--SNMMSDGEF--LRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILY 207
Query: 514 ELITGKEAAYKQDGEEIL---LAEAVFSMVEGGNAEA----KLSVLVDPNLQANKKEIAH 566
L+ G + D L + + +F + N K + VDP +A K+I
Sbjct: 208 ALLCGT-LPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266
Query: 567 H 567
H
Sbjct: 267 H 267
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Query: 339 GSVFR-----GIINGSTVAIKCMRRSI-----------SKEVNLLKKINHFNLINLFGAC 382
G VF+ G G A+K +++++ E N+L+++ H +++L A
Sbjct: 31 GKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF 90
Query: 383 EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVH 442
+ G YL+ E++ G L ++ +R F+ F +A +++ L +LH G ++
Sbjct: 91 QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLHQ---KGIIY 144
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+ NI+L+ KL +F + ++ + + T T GT YMAPE +
Sbjct: 145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHTFCGTIEYMAPEILMRSGHNRA 201
Query: 503 MDTYAFGVVLLELITG 518
+D ++ G ++ +++TG
Sbjct: 202 VDWWSLGALMYDMLTG 217
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 54/271 (19%)
Query: 351 VAIKCMRRSISK----------EVNLLKKINHFNLINLFGACEHDG----VFYLVYEFME 396
VA+K +R +++ E +NH ++ ++ E + + Y+V E+++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 397 NGSLSDWLH------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+L D +H KR E ++ C+ AL+ +H G +H+D+ NI
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQ---ALNFSH---------QNGIIHRDVKPANI 147
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTA--VGTNGYMAPEYMEYGLVTPEMDTYAF 508
++ K+ +F R+ +SG S T+TA +GT Y++PE V D Y+
Sbjct: 148 MISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHH 567
G VL E++T GE ++ S+ A V DP + + E ++
Sbjct: 206 GCVLYEVLT---------GEPPFTGDSPVSV-------AYQHVREDPIPPSARHEGLSAD 249
Query: 568 LIMLCLACIAREPESR-PSMAEVVSTLMKIQ 597
L + L +A+ PE+R + AE+ + L+++
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 54/279 (19%)
Query: 343 RGIINGSTVAIKCMRRSISK----------EVNLLKKINHFNLINLFGACEHD----GVF 388
R + + VA+K +R +++ E +NH ++ ++ E + +
Sbjct: 32 RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91
Query: 389 YLVYEFMENGSLSDWLH------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVH 442
Y+V E+++ +L D +H KR E ++ C+ L++ H G +H
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ---------ALNFSHQN---GIIH 139
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA--VGTNGYMAPEYMEYGLVT 500
+D+ NI++ K+ +F R+ +SG S T+TA +GT Y++PE V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 501 PEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQAN 560
D Y+ G VL E++T GE ++ S+ A V DP +
Sbjct: 198 ARSDVYSLGCVLYEVLT---------GEPPFTGDSPVSV-------AYQHVREDPIPPSA 241
Query: 561 KKE-IAHHLIMLCLACIAREPESR-PSMAEVVSTLMKIQ 597
+ E ++ L + L +A+ PE+R + AE+ + L+++
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + +K+ H N++ L + + + YLV++ + G L D
Sbjct: 61 IINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKL 460
+ ++ Y E + +C +I +A+ C G VH+++ N+LL K KL
Sbjct: 120 VAREFYSEADASHCIQQILESIAY-------CHSNGIVHRNLKPENLLLASKAKGAAVKL 172
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F E+ + GT GY++PE ++ + +D +A GV+L L+ G
Sbjct: 173 ADFGLAIEVNDSEAWHG----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 228
Query: 521 AAYKQD 526
+ +D
Sbjct: 229 PFWDED 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 346 INGSTVAIKCMRRS----------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFM 395
+ G VA+K + R I +E+ LK H ++I L+ F++V E++
Sbjct: 34 LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 396 ENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D++ K E + R+ + + Y H VH+D+ N+LLD +
Sbjct: 94 SGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 456 LRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGL-VTPEMDTYAFGVVLLE 514
+ AK+A+F S + + + +T+ G+ Y APE + L PE+D ++ GV+L
Sbjct: 148 MNAKIADFGL--SNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 515 LITG 518
L+ G
Sbjct: 204 LLCG 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGAC--EHDGVFYLVYEFMENGSLSDWLHK-KRYPEFV 413
++ + EVNLL+++ H N++ + + Y+V E+ E G L+ + K + +++
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGY--VHKDISSGNILLDKNLRAKLANFSFVRSAVR 471
R+ + L H +D G+ +H+D+ N+ LD KL +F R
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLEL 515
+ S KT VGT YM+PE M + D ++ G +L EL
Sbjct: 169 DTS---FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + +K+ H N++ L + + + YLV++ + G L D
Sbjct: 37 IINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 95
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKL 460
+ ++ Y E + +C +I +A+ C G VH+++ N+LL K KL
Sbjct: 96 VAREFYSEADASHCIQQILESIAY-------CHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F E+ + GT GY++PE ++ + +D +A GV+L L+ G
Sbjct: 149 ADFGLAIEVNDSEAWHGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 204
Query: 521 AAYKQD 526
+ +D
Sbjct: 205 PFWDED 210
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 29/184 (15%)
Query: 357 RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYP---EF 412
R ++ E+ ++ ++ +H N++NL GAC G YL++E+ G L ++L KR +
Sbjct: 92 REALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDE 151
Query: 413 VSWNCRFRI-----------------ALDVAHGLHYLH--NCTDPGYVHKDISSGNILLD 453
+ + + R+ A VA G+ +L +C VH+D+++ N+L+
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC-----VHRDLAARNVLVT 206
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLL 513
K+ +F R + +S Y A +MAPE + G+ T + D +++G++L
Sbjct: 207 HGKVVKICDFGLARD-IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
Query: 514 ELIT 517
E+ +
Sbjct: 266 EIFS 269
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 45/262 (17%)
Query: 357 RRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-------- 407
+ ++ E+ ++ + H N++NL GAC H G ++ E+ G L ++L +K
Sbjct: 78 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS 137
Query: 408 ----RYPEFVSWNCRFRIAL--------DVAHGLHYL--HNCTDPGYVHKDISSGNILLD 453
+ PE + + L VA G+ +L NC +H+D+++ N+LL
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC-----IHRDVAARNVLLT 192
Query: 454 KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLL 513
AK+ +F R + +S Y A +MAPE + + T + D +++G++L
Sbjct: 193 NGHVAKIGDFGLARD-IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 514 ELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCL 573
E+ + Y IL+ + +V+ G A+ + ++ +
Sbjct: 252 EIFSLGLNPYPG----ILVNSKFYKLVKDGYQMAQPAF------------APKNIYSIMQ 295
Query: 574 ACIAREPESRPSMAEVVSTLMK 595
AC A EP RP+ ++ S L +
Sbjct: 296 ACWALEPTHRPTFQQICSFLQE 317
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + +K+ H N++ L + + + YLV++ + G L D
Sbjct: 38 IINTKKLSARDFQK-LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKL 460
+ ++ Y E + +C +I +A+ C G VH+++ N+LL K KL
Sbjct: 97 VAREFYSEADASHCIQQILESIAY-------CHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F E+ + GT GY++PE ++ + +D +A GV+L L+ G
Sbjct: 150 ADFGLAIEVNDSEAWHGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 521 AAYKQD 526
+ +D
Sbjct: 206 PFWDED 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 120/255 (47%), Gaps = 36/255 (14%)
Query: 351 VAIKCMRR-SISK-----EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VAIK ++ S+S+ E ++ ++H L+ L+G C +++ E+M NG L ++L
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
+ R+ F + + DV + YL + ++H+D+++ N L++ K+++F
Sbjct: 111 REMRH-RFQTQQL-LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 465 FVRSAVREESGYSSTKTAVGTN---GYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
R + +E ++VG+ + PE + Y + + D +AFGV++ E+ + +
Sbjct: 166 LSRYVLDDEE-----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220
Query: 522 AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPE 581
Y++ F+ E A+ L P+L + K + + +C + +
Sbjct: 221 PYER-----------FTNSETAEHIAQGLRLYRPHLASEK------VYTIMYSCWHEKAD 263
Query: 582 SRPSMAEVVSTLMKI 596
RP+ ++S ++ +
Sbjct: 264 ERPTFKILLSNILDV 278
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 50/277 (18%)
Query: 343 RGIINGSTVAIKCMRRSISK----------EVNLLKKINHFNLINLFGACEHD----GVF 388
R + + VA+K +R +++ E +NH ++ ++ E + +
Sbjct: 32 RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91
Query: 389 YLVYEFMENGSLSDWLH------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVH 442
Y+V E+++ +L D +H KR E ++ C+ L++ H G +H
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ---------ALNFSHQN---GIIH 139
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+ NIL+ K+ +F R+ + T +GT Y++PE V
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 503 MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKK 562
D Y+ G VL E++T GE ++ S+ A V DP + +
Sbjct: 200 SDVYSLGCVLYEVLT---------GEPPFTGDSPVSV-------AYQHVREDPIPPSARH 243
Query: 563 E-IAHHLIMLCLACIAREPESR-PSMAEVVSTLMKIQ 597
E ++ L + L +A+ PE+R + AE+ + L+++
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + + + H N++ L + +G YLV++ + G L D
Sbjct: 36 IINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI 94
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKL 460
+ ++ Y E + +C +I V H C G VH+D+ N+LL K KL
Sbjct: 95 VAREYYSEADASHCIQQILESVNH-------CHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F A+ + + GT GY++PE + +D +A GV+L L+ G
Sbjct: 148 ADFGL---AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 521 AAYKQD 526
+ +D
Sbjct: 205 PFWDED 210
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 54/271 (19%)
Query: 351 VAIKCMRRSISK----------EVNLLKKINHFNLINLFGACEHDG----VFYLVYEFME 396
VA+K +R +++ E +NH ++ ++ E + + Y+V E+++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 397 NGSLSDWLH------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+L D +H KR E ++ C+ L++ H G +H+D+ NI
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQ---------ALNFSHQN---GIIHRDVKPANI 147
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTA--VGTNGYMAPEYMEYGLVTPEMDTYAF 508
++ K+ +F R+ +SG S T+TA +GT Y++PE V D Y+
Sbjct: 148 MISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHH 567
G VL E++T GE ++ S+ A V DP + + E ++
Sbjct: 206 GCVLYEVLT---------GEPPFTGDSPVSV-------AYQHVREDPIPPSARHEGLSAD 249
Query: 568 LIMLCLACIAREPESR-PSMAEVVSTLMKIQ 597
L + L +A+ PE+R + AE+ + L+++
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 37/192 (19%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLF------GACEHDGVFYLV 391
+G VAIK + R +E+ LLK + H N+I L + + FYLV
Sbjct: 48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
FM+ L K +F ++ + + GL Y+H+ G VH+D+ GN+
Sbjct: 108 MPFMQTD-----LQKIMGLKFSEEKIQY-LVYQMLKGLKYIHSA---GVVHRDLKPGNLA 158
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE----YMEYGLVTPEMDTYA 507
++++ K+ +F R A E +GY V T Y APE +M Y +D ++
Sbjct: 159 VNEDCELKILDFGLARHADAEMTGY------VVTRWYRAPEVILSWMHYNQT---VDIWS 209
Query: 508 FGVVLLELITGK 519
G ++ E++TGK
Sbjct: 210 VGCIMAEMLTGK 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + + + H N++ L + +G YLV++ + G L D
Sbjct: 36 IINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI 94
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKL 460
+ ++ Y E + +C +I V H C G VH+D+ N+LL K KL
Sbjct: 95 VAREYYSEADASHCIQQILESVNH-------CHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F A+ + + GT GY++PE + +D +A GV+L L+ G
Sbjct: 148 ADFGL---AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 521 AAYKQD 526
+ +D
Sbjct: 205 PFWDED 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 467
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 468 DKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 579
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 580 EVTAMLEKG 588
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 109
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 110 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 167 XYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 221
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 222 EVTAMLEKG 230
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 468
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 469 DKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 526 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 580
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 581 EVTAMLEKG 589
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 54/271 (19%)
Query: 351 VAIKCMRRSISK----------EVNLLKKINHFNLINLFGACEHDG----VFYLVYEFME 396
VA+K +R +++ E +NH ++ ++ E + + Y+V E+++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 397 NGSLSDWLH------KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
+L D +H KR E ++ C+ AL+ +H G +H+D+ NI
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQ---ALNFSH---------QNGIIHRDVKPANI 164
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTA--VGTNGYMAPEYMEYGLVTPEMDTYAF 508
++ K+ +F R+ +SG S T+TA +GT Y++PE V D Y+
Sbjct: 165 MISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 509 GVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKE-IAHH 567
G VL E++T GE ++ S+ A V DP + + E ++
Sbjct: 223 GCVLYEVLT---------GEPPFTGDSPVSV-------AYQHVREDPIPPSARHEGLSAD 266
Query: 568 LIMLCLACIAREPESR-PSMAEVVSTLMKIQ 597
L + L +A+ PE+R + AE+ + L+++
Sbjct: 267 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 297
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 339 GSVFRGIINGS--TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G VF+GI N + VAIK + I +E+ +L + + + +G+
Sbjct: 37 GEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKL 96
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIAL---DVAHGLHYLHNCTDPGYVHKDI 445
+++ E++ GS D L + EF +IA ++ GL YLH+ +H+DI
Sbjct: 97 WIIMEYLGGGSALDLLRAGPFDEF-------QIATMLKEILKGLDYLHSEKK---IHRDI 146
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDT 505
+ N+LL + KLA+F + T VGT +MAPE ++ + D
Sbjct: 147 KAANVLLSEQGDVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 506 YAFGVVLLELITGK 519
++ G+ +EL G+
Sbjct: 204 WSLGITAIELAKGE 217
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGA---CEHDGV-F 388
G V+RG G VA+K +S +E L + H N++ + H
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+L+ + E GSL D+L + + +C RI L +A GL +LH P H+
Sbjct: 82 WLITHYHEMGSLYDYL---QLTTLDTVSC-LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEYMEYGLV 499
D+ S NIL+ KN + +A+ AV + VGT YMAPE ++ +
Sbjct: 138 DLKSKNILVKKNGQCCIADLGL---AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 194
Query: 500 T------PEMDTYAFGVVLLEL 515
+D +AFG+VL E+
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 125
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 126 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 183 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 237
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 238 EVTAMLEKG 246
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 125
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 126 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 183 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 237
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 238 EVTAMLEKG 246
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRK--IGSFDETCTRF 136
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 137 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 191
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ VGT Y++PE + + D +A G ++ +L+ G
Sbjct: 192 NSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGA---CEHDGV-F 388
G V+RG G VA+K +S +E L + H N++ + H
Sbjct: 51 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 110
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+L+ + E GSL D+L + + +C RI L +A GL +LH P H+
Sbjct: 111 WLITHYHEMGSLYDYL---QLTTLDTVSC-LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 166
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEYMEYGLV 499
D+ S NIL+ KN + +A+ AV + VGT YMAPE ++ +
Sbjct: 167 DLKSKNILVKKNGQCCIADLGL---AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 223
Query: 500 T------PEMDTYAFGVVLLEL 515
+D +AFG+VL E+
Sbjct: 224 VDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGA---CEHDGV-F 388
G V+RG G VA+K +S +E L + H N++ + H
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH-----NCTDPGYVHK 443
+L+ + E GSL D+L + + +C RI L +A GL +LH P H+
Sbjct: 82 WLITHYHEMGSLYDYL---QLTTLDTVSC-LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEYMEYGLV 499
D+ S NIL+ KN + +A+ AV + VGT YMAPE ++ +
Sbjct: 138 DLKSKNILVKKNGQCCIADLGL---AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 194
Query: 500 T------PEMDTYAFGVVLLEL 515
+D +AFG+VL E+
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + + + H N++ L + +G YL+++ + G L D
Sbjct: 43 IINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI 101
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA---KL 460
+ ++ Y E + +C +I V H C G VH+++ N+LL L+ KL
Sbjct: 102 VAREYYSEADASHCIQQILEAVLH-------CHQMGVVHRNLKPENLLLASKLKGAAVKL 154
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F A+ E + GT GY++PE + +D +A GV+L L+ G
Sbjct: 155 ADFGL---AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP 211
Query: 521 AAYKQD 526
+ +D
Sbjct: 212 PFWDED 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 339 GSVFRG-IINGSTVAIKCMRRSISK------------EVNLLKKINHFNLINLFG-ACEH 384
G V+ G I+ + I+C +S+S+ E L++ +NH N++ L G
Sbjct: 35 GVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP 94
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+G+ +++ +M +G L ++ + V F L VA G+ YL + +VH+D
Sbjct: 95 EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF--GLQVARGMEYL---AEQKFVHRD 149
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAV-REESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
+++ N +LD++ K+A+F R + RE + A + A E ++ T +
Sbjct: 150 LAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKS 209
Query: 504 DTYAFGVVLLELITGKEAAYKQ 525
D ++FGV+L EL+T Y+
Sbjct: 210 DVWSFGVLLWELLTRGAPPYRH 231
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 123
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 124 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 181 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 235
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 236 EVTAMLEKG 244
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 33 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 92
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 93 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 147 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 205
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 206 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 248
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 249 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 286
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 54 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 113
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 114 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 167
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 168 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 226
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 227 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 269
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 270 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 307
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 34/260 (13%)
Query: 339 GSVF--RGIINGSTVAIKCMRRS----------ISKEVNLLKKINHFNLINLFGACEHDG 386
G+V+ R + N VAIK M S I KEV L+K+ H N I G +
Sbjct: 68 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 127
Query: 387 VFYLVYEFMENGSLSDWL--HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+LV E+ GS SD L HKK E V AL GL YLH+ +H+D
Sbjct: 128 TAWLVMEYCL-GSASDLLEVHKKPLQE-VEIAAVTHGAL---QGLAYLHSHN---MIHRD 179
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEY---MEYGLVTP 501
+ +GNILL + KL +F S + VGT +MAPE M+ G
Sbjct: 180 VKAGNILLSEPGLVKLGDFG-------SASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEIL--LAEAVFSMVEGGNAEAKLSVLVDPNLQA 559
++D ++ G+ +EL K + + L +A+ ++ G+ VD LQ
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 292
Query: 560 NKKEIAHHLIMLCLACIARE 579
++ ++L + RE
Sbjct: 293 IPQDRPTSEVLLKHRFVLRE 312
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 30 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 89
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 90 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 202
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 203 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 245
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 246 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 283
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
A ++ GL +LH+ G V++D+ NILLDK+ K+A+F + + G + T
Sbjct: 124 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENM---LGDAKTNX 177
Query: 482 AVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
GT Y+APE + +D ++FGV+L E++ G+ + QD EE+
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR-----YPE 411
R +EV +L + H N++ + E +G Y+V ++ E G L ++ ++ +
Sbjct: 67 REESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126
Query: 412 FVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVR 471
+ W + +AL H D +H+DI S NI L K+ +L +F R
Sbjct: 127 ILDWFVQICLALKHVH---------DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-- 175
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA 521
S + +GT Y++PE E + D +A G VL EL T K A
Sbjct: 176 -NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 30 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 89
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 90 STV-QLIMQLMPFGXLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 202
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 203 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 245
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 246 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 283
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGAC--EHDGVFYLVYEFMENGSLSDWLHK-KRYPEFV 413
++ + EVNLL+++ H N++ + + Y+V E+ E G L+ + K + +++
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGY--VHKDISSGNILLDKNLRAKLANFSFVRSAVR 471
R+ + L H +D G+ +H+D+ N+ LD KL +F R
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLEL 515
+E K VGT YM+PE M + D ++ G +L EL
Sbjct: 169 DED---FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
A ++ GL +LH+ G V++D+ NILLDK+ K+A+F + + G + T
Sbjct: 125 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENM---LGDAKTNE 178
Query: 482 AVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
GT Y+APE + +D ++FGV+L E++ G+ + QD EE+
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 109
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 110 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 167 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 221
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 222 EVTAMLEKG 230
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 89 STV-QLITQLMPFGXLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 201
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 202 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 244
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 89 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 201
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 202 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 244
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 137
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 138 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 192
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ VGT Y++PE + D +A G ++ +L+ G
Sbjct: 193 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 115
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 116 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 227
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 228 EVTAMLEKG 236
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 96 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 208
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 209 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 251
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 252 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 89 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 201
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 202 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 244
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 89 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 201
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 202 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 244
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 105
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 106 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 217
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 218 EVTAMLEKG 226
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 34/260 (13%)
Query: 339 GSVF--RGIINGSTVAIKCMRRS----------ISKEVNLLKKINHFNLINLFGACEHDG 386
G+V+ R + N VAIK M S I KEV L+K+ H N I G +
Sbjct: 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88
Query: 387 VFYLVYEFMENGSLSDWL--HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
+LV E+ GS SD L HKK E V AL GL YLH+ +H+D
Sbjct: 89 TAWLVMEYC-LGSASDLLEVHKKPLQE-VEIAAVTHGAL---QGLAYLHSHN---MIHRD 140
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEY---MEYGLVTP 501
+ +GNILL + KL +F S + VGT +MAPE M+ G
Sbjct: 141 VKAGNILLSEPGLVKLGDFG-------SASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 502 EMDTYAFGVVLLELITGKEAAYKQDGEEIL--LAEAVFSMVEGGNAEAKLSVLVDPNLQA 559
++D ++ G+ +EL K + + L +A+ ++ G+ VD LQ
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 253
Query: 560 NKKEIAHHLIMLCLACIARE 579
++ ++L + RE
Sbjct: 254 IPQDRPTSEVLLKHRFVLRE 273
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 91 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 203
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 204 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 246
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 247 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 35 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 94
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 95 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 148
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 149 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 207
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 208 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 250
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 251 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 288
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 91 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 203
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 204 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 246
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 247 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 96 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 208
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 209 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 251
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 252 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 355 CMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
++ + E N+++++++ ++ + G CE + + LV E E G L+ +L + R+ V
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH---VK 103
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ V+ G+ YL + +VH+D+++ N+LL AK+++F ++ +E+
Sbjct: 104 DKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
Y + + APE + Y + + D ++FGV++ E + + Y+ +
Sbjct: 161 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----MKGS 215
Query: 535 AVFSMVEGG 543
V +M+E G
Sbjct: 216 EVTAMLEKG 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 92 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 204
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 205 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 247
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 248 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 57 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 114
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 115 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 169
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 170 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 92 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 204
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 205 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 247
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 248 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 92 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 204
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 205 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 247
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 248 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 56 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 113
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 114 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 168
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 169 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 54 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 111
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 112 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 166
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 167 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 134
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 135 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 189
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 190 NAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 96 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 208
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 209 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 251
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 252 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 26 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 85
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 86 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRD 139
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 140 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 198
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 199 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 241
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 242 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 279
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 55 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 112
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 113 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 167
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 168 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGAC--EHDGVFYLVYEFMENGSLSDWLHK-KRYPEFV 413
++ + EVNLL+++ H N++ + + Y+V E+ E G L+ + K + +++
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 414 SWNCRFRIALDVAHGLHYLHNCTDPGY--VHKDISSGNILLDKNLRAKLANFSFVRSAVR 471
R+ + L H +D G+ +H+D+ N+ LD KL +F R
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLEL 515
+ S K VGT YM+PE M + D ++ G +L EL
Sbjct: 169 DTS---FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 133
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 134 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 188
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ VGT Y++PE + D +A G ++ +L+ G
Sbjct: 189 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 371 NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
NH L+ L + + + V E++ G L H +R + + RF A +++ L+
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA-EISLALN 167
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
YLH + G +++D+ N+LLD KL ++ + +R +T T GT Y+A
Sbjct: 168 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIA 221
Query: 491 PEYM---EYGLVTPEMDTYAFGVVLLELITGK 519
PE + +YG +D +A GV++ E++ G+
Sbjct: 222 PEILRGEDYGF---SVDWWALGVLMFEMMAGR 250
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 23 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 82
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 83 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 136
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 195
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 196 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 238
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 239 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 276
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 134
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 135 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 189
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 190 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 339 GSVFR-----GIINGSTVAIKCMRRSI-----------SKEVNLLKKINHFNLINLFGAC 382
G VF+ G G A+K +++++ E N+L+++ H +++L A
Sbjct: 31 GKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF 90
Query: 383 EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVH 442
+ G YL+ E++ G L ++ +R F+ F +A +++ L +LH G ++
Sbjct: 91 QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLHQ---KGIIY 144
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+D+ NI+L+ KL +F + ++ + + T GT YMAPE +
Sbjct: 145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDG---TVTHXFCGTIEYMAPEILMRSGHNRA 201
Query: 503 MDTYAFGVVLLELITG 518
+D ++ G ++ +++TG
Sbjct: 202 VDWWSLGALMYDMLTG 217
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 134
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 135 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 189
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 190 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 134
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 135 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 189
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 190 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 136
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 137 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 191
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 136
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 137 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 191
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 137
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 138 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 192
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 193 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 136
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 137 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 191
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 192 NXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 136
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 137 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 191
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 21/184 (11%)
Query: 346 INGSTVAIKCMRRS----------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFM 395
+ G VA+K + R I +E+ LK H ++I L+ F++V E++
Sbjct: 34 LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 396 ENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D++ K E + R+ + + Y H VH+D+ N+LLD +
Sbjct: 94 SGGELFDYICKHGRVEEMEAR---RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 456 LRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGL-VTPEMDTYAFGVVLLE 514
+ AK+A+F S + + + + + G+ Y APE + L PE+D ++ GV+L
Sbjct: 148 MNAKIADFGL--SNMMSDGEF--LRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203
Query: 515 LITG 518
L+ G
Sbjct: 204 LLCG 207
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 23/256 (8%)
Query: 339 GSVFRGI--INGSTVAIKCMR--------RSISKEVNLLKKINHFNLINLFGACEHDGVF 388
+V++G+ G VA+K ++ + +E++L+K++ H N++ L+ +
Sbjct: 19 ATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKL 78
Query: 389 YLVYEFMENGSLSDWLHKKRY---PEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDI 445
LV+EFM+N L ++ + P + N + GL + C + +H+D+
Sbjct: 79 TLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF---CHENKILHRDL 134
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYGLVTPEMD 504
N+L++K + KL +F R+ + +SS V T Y AP+ M + +D
Sbjct: 135 KPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS---EVVTLWYRAPDVLMGSRTYSTSID 191
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
++ G +L E+ITGK + EE L + +F ++ N SV P N ++
Sbjct: 192 IWSCGCILAEMITGKPLFPGTNDEEQL--KLIFDIMGTPNESLWPSVTKLPKYNPNIQQR 249
Query: 565 AHHLIMLCLACIAREP 580
+ L +EP
Sbjct: 250 PPRDLRQVLQPHTKEP 265
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 136
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 137 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 191
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 192 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 84 VTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 141
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 142 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 196
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 197 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 358 RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNC 417
+ + +E+ L K + H N++ G+ +G + E + GSLS L K P +
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 123
Query: 418 RFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS 477
+ GL YLH D VH+DI N+L+ N + + S ++ R
Sbjct: 124 IGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINP 178
Query: 478 STKTAVGTNGYMAPEYMEYGL--VTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
T+T GT YMAPE ++ G D ++ G ++E+ TGK Y+ L E
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE-------LGEP 231
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAE-VVSTLM 594
+M + G + V P + + A I L C +P+ R + +V +
Sbjct: 232 QAAMFKVGMFK------VHPEIPESMSAEAKAFI---LKCFEPDPDKRACANDLLVDEFL 282
Query: 595 KIQLDVQRSQTLL 607
K+ +++Q L
Sbjct: 283 KVSSKKKKTQPKL 295
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 139
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 140 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 194
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 195 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 61 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 118
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 119 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 173
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 174 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 33 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 92
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 93 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 147 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 205
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 206 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 248
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 249 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 286
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 39 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 98
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 99 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 152
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 153 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 211
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 212 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 254
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ C + +SRP E++ K+ D QR
Sbjct: 255 TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 292
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 91 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 203
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 204 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 246
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 247 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++E +++ +++H + L+ + D Y + +NG L ++ K F RF
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRF 133
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
A ++ L YLH G +H+D+ NILL++++ ++ +F + + ES +
Sbjct: 134 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQARA 188
Query: 480 KTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
VGT Y++PE + D +A G ++ +L+ G
Sbjct: 189 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 89 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 143 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 201
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 202 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 244
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 92 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 204
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 205 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 247
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ C + +SRP E++ K+ D QR
Sbjct: 248 TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 285
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 113
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 114 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 167
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 168 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 113
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 114 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 167
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 168 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 96 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 150 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 208
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 209 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 251
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 252 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 289
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 89 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 201
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 202 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 244
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ C + +SRP E++ K+ D QR
Sbjct: 245 TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 282
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
Y V E++ G L H ++ F + F A ++A GL +L + G +++D+
Sbjct: 417 LYFVMEYVNGGDLM--YHIQQVGRFKEPHAVF-YAAEIAIGLFFLQS---KGIIYRDLKL 470
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
N++LD K+A+F + + + +TK GT Y+APE + Y +D +A
Sbjct: 471 DNVMLDSEGHIKIADFGMCKENIWDGV---TTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 527
Query: 508 FGVVLLELITGKEAAYKQDGEEIL 531
FGV+L E++ G+ +D +E+
Sbjct: 528 FGVLLYEMLAGQAPFEGEDEDELF 551
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 18/189 (9%)
Query: 352 AIKCMRRSISK-----EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK 406
A+K +++++ K E+ +L +++H N+I L E LV E + G L D + +
Sbjct: 82 ALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE 141
Query: 407 KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANF 463
K Y S + + YLH + G VH+D+ N+L + K+A+F
Sbjct: 142 KGY---YSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADF 195
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAY 523
S + E KT GT GY APE + PE+D ++ G++ L+ G E Y
Sbjct: 196 GL--SKIVEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
Query: 524 KQDGEEILL 532
+ G++ +
Sbjct: 252 DERGDQFMF 260
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
Y V E++ G L H ++ F + F A ++A GL +L + G +++D+
Sbjct: 97 YFVMEYVNGGDLM--YHIQQVGRFKEPHAVF-YAAEIAIGLFFLQS---KGIIYRDLKLD 150
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
N++LD K+A+F + + + +TK GT Y+APE + Y +D +AF
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGV---TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 509 GVVLLELITGKEAAYKQDGEEIL 531
GV+L E++ G+ +D +E+
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELF 230
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 34/248 (13%)
Query: 343 RGIINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
+G + I+ I E++LLK ++H N+I LF E FYLV EF E G L +
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 403 W-LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD-KN--LRA 458
+++ ++ E + N I + G+ YLH VH+DI NILL+ KN L
Sbjct: 136 QIINRHKFDECDAAN----IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNI 188
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K+ +F ++ + +GT Y+APE ++ + D ++ GV++ L+ G
Sbjct: 189 KIVDFGLSSFFSKD----YKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
Query: 519 KEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLA---- 574
Q+ ++I+ VE G D N N + A LI L L
Sbjct: 244 YPPFGGQNDQDII------KKVEKG------KYYFDFNDWKNISDEAKELIKLMLTYDYN 291
Query: 575 --CIAREP 580
C A E
Sbjct: 292 KRCTAEEA 299
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDW-LHKKRYPEFVSWNCR 418
+E+ ++K ++H N+I L+ E + YLV E G L + +HK+ + E +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE----SDA 108
Query: 419 FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESG 475
RI DV + Y H H+D+ N L + KL +F A R + G
Sbjct: 109 ARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGL---AARFKPG 162
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA-- 533
+T VGT Y++P+ +E GL PE D ++ GV++ L+ G E++L
Sbjct: 163 -KMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 220
Query: 534 EAVFSMVE 541
E F+ E
Sbjct: 221 EGTFTFPE 228
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL-SDW 403
IIN ++ + ++ + +E + + + H N++ L + +G YLV++ + G L D
Sbjct: 63 IINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI 121
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD---KNLRAKL 460
+ ++ Y E + +C +I V H +H H+ VH+D+ N+LL K KL
Sbjct: 122 VAREYYSEADASHCIHQILESVNH-IHQ-HDI-----VHRDLKPENLLLASKCKGAAVKL 174
Query: 461 ANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKE 520
A+F E+ + GT GY++PE + +D +A GV+L L+ G
Sbjct: 175 ADFGLAIEVQGEQQAWFGF---AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYP 231
Query: 521 AAYKQDGEEI 530
+ +D ++
Sbjct: 232 PFWDEDQHKL 241
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDW-LHKKRYPEFVSWNCR 418
+E+ ++K ++H N+I L+ E + YLV E G L + +HK+ + E +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE----SDA 125
Query: 419 FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVREESG 475
RI DV + Y H H+D+ N L + KL +F A R + G
Sbjct: 126 ARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGL---AARFKPG 179
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLA-- 533
+T VGT Y++P+ +E GL PE D ++ GV++ L+ G E++L
Sbjct: 180 -KMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 237
Query: 534 EAVFSMVE 541
E F+ E
Sbjct: 238 EGTFTFPE 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 91 STV-QLIMQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 203
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 204 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 246
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ C + +SRP E++ K+ D QR
Sbjct: 247 TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++LK+I H N+I L E+ L+ E + G L D+L +K E ++
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK---ESLTEE 114
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ +G++YLH+ H D+ NI LLD+N+ R K+ +F A +
Sbjct: 115 EATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL---AHKI 168
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ G + K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 169 DFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 358 RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFME---------NGSLSDWLHKKR 408
R+ +E+ LL++++H N+I L A H LV++FME N + H K
Sbjct: 57 RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKA 116
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
Y L GL YLH +H+D+ N+LLD+N KLA+F +S
Sbjct: 117 Y------------MLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYM----EYGLVTPEMDTYAFGVVLLELI 516
Y V T Y APE + YG+ +D +A G +L EL+
Sbjct: 162 FGSPNRAYXHQ---VVTRWYRAPELLFGARMYGV---GVDMWAVGCILAELL 207
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AIK +R + S + N ++ +++ ++ L G C
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 91 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 203
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 204 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 246
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ C + +SRP E++ K+ D QR
Sbjct: 247 TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 284
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 12/220 (5%)
Query: 358 RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNC 417
+ + +E+ L K + H N++ G+ +G + E + GSLS L K P +
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 109
Query: 418 RFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS 477
+ GL YLH D VH+DI N+L+ N + + S ++ R
Sbjct: 110 IGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINP 164
Query: 478 STKTAVGTNGYMAPEYMEYGL--VTPEMDTYAFGVVLLELITGKEAAYK-QDGEEILLAE 534
T+T GT YMAPE ++ G D ++ G ++E+ TGK Y+ + + +
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 224
Query: 535 AVF----SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIM 570
+F + E +AEAK +L +K+ A+ L++
Sbjct: 225 GMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 264
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 28/158 (17%)
Query: 381 ACEHDGVFYLVYEFMENGSLSDWLHK--KRYPEFVSWNCRFRI-----ALDVAHGLHYLH 433
A + + YLV ++ G L L K + PE ++ RF I A+D H LHY
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA---RFYIGEMVLAIDSIHQLHY-- 196
Query: 434 NCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVR-EESGYSSTKTAVGTNGYMAPE 492
VH+DI N+LLD N +LA+F S ++ + G + AVGT Y++PE
Sbjct: 197 -------VHRDIKPDNVLLDVNGHIRLADFG---SCLKMNDDGTVQSSVAVGTPDYISPE 246
Query: 493 YME-----YGLVTPEMDTYAFGVVLLELITGKEAAYKQ 525
++ G PE D ++ GV + E++ G+ Y +
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 339 GSVFRG--IINGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++G I G V AI +R + S + N ++ +++ ++ L G C
Sbjct: 63 GTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 122
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
V L+ + M G L D++ + + + + + +A G++YL D VH+D
Sbjct: 123 STV-QLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 176
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMD 504
+++ N+L+ K+ +F + EE Y + V +MA E + + + T + D
Sbjct: 177 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSD 235
Query: 505 TYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEI 564
+++GV + EL+T Y DG + A + S++E G L P +
Sbjct: 236 VWSYGVTVWELMTFGSKPY--DG---IPASEISSILEKGER------LPQPPI------C 278
Query: 565 AHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + +SRP E++ K+ D QR
Sbjct: 279 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 316
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 28/158 (17%)
Query: 381 ACEHDGVFYLVYEFMENGSLSDWLHK--KRYPEFVSWNCRFRI-----ALDVAHGLHYLH 433
A + + YLV ++ G L L K + PE ++ RF I A+D H LHY
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA---RFYIGEMVLAIDSIHQLHY-- 212
Query: 434 NCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVR-EESGYSSTKTAVGTNGYMAPE 492
VH+DI N+LLD N +LA+F S ++ + G + AVGT Y++PE
Sbjct: 213 -------VHRDIKPDNVLLDVNGHIRLADFG---SCLKMNDDGTVQSSVAVGTPDYISPE 262
Query: 493 YME-----YGLVTPEMDTYAFGVVLLELITGKEAAYKQ 525
++ G PE D ++ GV + E++ G+ Y +
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 300
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++L+++ H N+I L E+ L+ E + G L D+L +K E +S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEE 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ G++YLH H D+ NI LLDKN+ KL +F
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--- 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E G K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 170 EDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++L+++ H N+I L E+ L+ E + G L D+L +K E +S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEE 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ G++YLH H D+ NI LLDKN+ KL +F
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--- 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E G K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 170 EDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL-HKKRYPEFVS 414
M + +E++ LK + H ++I L+ +V E+ G L D++ KKR E
Sbjct: 52 MHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTE--- 107
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES 474
+ R + + Y H VH+D+ N+LLD NL K+A+F S + +
Sbjct: 108 -DEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGL--SNIMTDG 161
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVT-PEMDTYAFGVVLLELITGK 519
+ KT+ G+ Y APE + L PE+D ++ G+VL ++ G+
Sbjct: 162 NF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++L+++ H N+I L E+ L+ E + G L D+L +K E +S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEE 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ G++YLH H D+ NI LLDKN+ KL +F
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--- 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E G K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 170 EDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++L+++ H N+I L E+ L+ E + G L D+L +K E +S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEE 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ G++YLH H D+ NI LLDKN+ KL +F
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--- 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E G K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 170 EDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 130/286 (45%), Gaps = 56/286 (19%)
Query: 339 GSVFRG--IINGSTVAIK-CMR-----------RSISKEVNLLKKINHFNLINLFGACEH 384
G+V +G I G ++ I C++ ++++ + + ++H +++ L G C
Sbjct: 45 GTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG 104
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
LV +++ GSL D H +++ + + +A G++YL + G VH++
Sbjct: 105 SS-LQLVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRN 158
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESG--YSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+++ N+LL + ++A+F ++ YS KT + +MA E + +G T +
Sbjct: 159 LAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMALESIHFGKYTHQ 215
Query: 503 MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSV----------- 551
D +++GV + EL+T Y + LAE V ++E G A+ +
Sbjct: 216 SDVWSYGVTVWELMTFGAEPYAG----LRLAE-VPDLLEKGERLAQPQICTIDVYMVMVK 270
Query: 552 --LVDPNLQANKKEIAHHLIMLCLACIAREP--------ESRPSMA 587
++D N++ KE+A+ + AR+P ES P +A
Sbjct: 271 CWMIDENIRPTFKELANEFTRM-----ARDPPRYLVIKRESGPGIA 311
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++L+++ H N+I L E+ L+ E + G L D+L +K E +S
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEE 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ G++YLH H D+ NI LLDKN+ KL +F
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--- 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E G K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 170 EDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
R I +EV++L+++ H N+I L E+ L+ E + G L D+L +K E +S
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEE 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI-LLDKNL---RAKLANFSFVRSAVRE 472
+ G++YLH H D+ NI LLDKN+ KL +F
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--- 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E G K GT ++APE + Y + E D ++ GV+ L++G
Sbjct: 170 EDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 130/286 (45%), Gaps = 56/286 (19%)
Query: 339 GSVFRG--IINGSTVAIK-CMR-----------RSISKEVNLLKKINHFNLINLFGACEH 384
G+V +G I G ++ I C++ ++++ + + ++H +++ L G C
Sbjct: 27 GTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG 86
Query: 385 DGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
LV +++ GSL D H +++ + + +A G++YL + G VH++
Sbjct: 87 SS-LQLVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRN 140
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESG--YSSTKTAVGTNGYMAPEYMEYGLVTPE 502
+++ N+LL + ++A+F ++ YS KT + +MA E + +G T +
Sbjct: 141 LAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMALESIHFGKYTHQ 197
Query: 503 MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSV----------- 551
D +++GV + EL+T Y + LAE V ++E G A+ +
Sbjct: 198 SDVWSYGVTVWELMTFGAEPYAG----LRLAE-VPDLLEKGERLAQPQICTIDVYMVMVK 252
Query: 552 --LVDPNLQANKKEIAHHLIMLCLACIAREP--------ESRPSMA 587
++D N++ KE+A+ + AR+P ES P +A
Sbjct: 253 CWMIDENIRPTFKELANEFTRM-----ARDPPRYLVIKRESGPGIA 293
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGV------------FYLVYEFMENGSLSDWL 404
R + +EV L K+ H ++ F A Y+ + +L DW+
Sbjct: 47 REKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
+ + E + I L +A + +LH+ G +H+D+ NI + K+ +F
Sbjct: 107 NGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFG 163
Query: 465 FVRSAVREES---------GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLEL 515
V + ++E Y+ VGT YM+PE + + ++D ++ G++L EL
Sbjct: 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
Query: 516 I 516
+
Sbjct: 224 L 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 34/262 (12%)
Query: 341 VFRG--IINGSTVAIKCM----------RRSISKEVNLLKKINHFNLINLFGACEHDGVF 388
V+R +++G VA+K + R KE++LLK++NH N+I + + D
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 389 YLVYEFMENGSLSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
+V E + G LS + H K+ + ++ + + L ++H+ +H+DI
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKP 164
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
N+ + KL + R S ++ + VGT YM+PE + + D ++
Sbjct: 165 ANVFITATGVVKLGDLGLGRFF---SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWS 221
Query: 508 FGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
G +L E+ + Y G+++ L +S+ + K+ P L ++ +
Sbjct: 222 LGCLLYEMAALQSPFY---GDKMNL----YSLCK------KIEQCDYPPLPSD--HYSEE 266
Query: 568 LIMLCLACIAREPESRPSMAEV 589
L L CI +PE RP + V
Sbjct: 267 LRQLVNMCINPDPEKRPDVTYV 288
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISS 447
Y V E++ G L H ++ +F F A +++ GL +LH G +++D+
Sbjct: 95 LYFVMEYVNGGDL--MYHIQQVGKFKEPQAVF-YAAEISIGLFFLHKR---GIIYRDLKL 148
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
N++LD K+A+F + + + +T+ GT Y+APE + Y +D +A
Sbjct: 149 DNVMLDSEGHIKIADFGMCKEHMMDGV---TTREFCGTPDYIAPEIIAYQPYGKSVDWWA 205
Query: 508 FGVVLLELITGKEAAYKQDGEEIL 531
+GV+L E++ G+ +D +E+
Sbjct: 206 YGVLLYEMLAGQPPFDGEDEDELF 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 347 NGSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFMEN 397
G+ VA+K ++ R +E+ +LK ++ ++ G G LV E++ +
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIAL---DVAHGLHYL--HNCTDPGYVHKDISSGNILL 452
G L D+L + R S R+ L + G+ YL C VH+D+++ NIL+
Sbjct: 98 GCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYLGSRRC-----VHRDLAARNILV 147
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
+ K+A+F + ++ Y + + APE + + + + D ++FGVVL
Sbjct: 148 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 207
Query: 513 LELIT 517
EL T
Sbjct: 208 YELFT 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
IIN +A M+ I +E++ L+ + H ++I L+ + +V E+ N L D++
Sbjct: 36 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 94
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
++ + +S R + + Y H VH+D+ N+LLD++L K+A+F
Sbjct: 95 VQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFG 148
Query: 465 FVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVT-PEMDTYAFGVVL 512
S + + + KT+ G+ Y APE + L PE+D ++ GV+L
Sbjct: 149 L--SNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 25/269 (9%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL----SDWLHKKRYPEF 412
+ ++ KE+ + + H L+NL A E D ++YEFM G L +D +K E
Sbjct: 198 KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 257
Query: 413 VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVRE 472
V + V GL ++H YVH D+ NI+ +L F +A +
Sbjct: 258 VEY------MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL- 531
S K GT + APE E V D ++ GV+ L++G ++ +E L
Sbjct: 309 PK--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 366
Query: 532 --------LAEAVFSMV-EGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPES 582
+ ++ FS + E G + +L DPN + + H + R+ +
Sbjct: 367 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 426
Query: 583 RPSMAEVVSTLMKIQLDVQRSQTLLLERI 611
S + +K + D L RI
Sbjct: 427 PSSRYTKIRDSIKTKYDAWPEPLPPLGRI 455
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 347 NGSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFMEN 397
G+ VA+K ++ R +E+ +LK ++ ++ G G LV E++ +
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIAL---DVAHGLHYL--HNCTDPGYVHKDISSGNILL 452
G L D+L + R S R+ L + G+ YL C VH+D+++ NIL+
Sbjct: 99 GCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYLGSRRC-----VHRDLAARNILV 148
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
+ K+A+F + ++ Y + + APE + + + + D ++FGVVL
Sbjct: 149 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 208
Query: 513 LELITGKEAAYKQDGEEILL---AEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLI 569
EL T + + E + + V ++ + L P A E+ H L+
Sbjct: 209 YELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPP--ACPAEV-HELM 265
Query: 570 MLCLACIAREPESRPSMAEVVSTL 593
LC A P+ RPS + + L
Sbjct: 266 KLCW---APSPQDRPSFSALGPQL 286
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
IIN +A M+ I +E++ L+ + H ++I L+ + +V E+ N L D++
Sbjct: 40 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 98
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
++ + +S R + + Y H VH+D+ N+LLD++L K+A+F
Sbjct: 99 VQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFG 152
Query: 465 FVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGL-VTPEMDTYAFGVVL 512
S + + + KT+ G+ Y APE + L PE+D ++ GV+L
Sbjct: 153 L--SNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
IIN +A M+ I +E++ L+ + H ++I L+ + +V E+ N L D++
Sbjct: 45 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 103
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
++ + +S R + + Y H VH+D+ N+LLD++L K+A+F
Sbjct: 104 VQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFG 157
Query: 465 FVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVT-PEMDTYAFGVVL 512
S + + + KT+ G+ Y APE + L PE+D ++ GV+L
Sbjct: 158 L--SNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 347 NGSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDG--VFYLVYEFMEN 397
G+ VA+K ++ R +E+ +LK ++ ++ G G LV E++ +
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIAL---DVAHGLHYL--HNCTDPGYVHKDISSGNILL 452
G L D+L + R S R+ L + G+ YL C VH+D+++ NIL+
Sbjct: 111 GCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYLGSRRC-----VHRDLAARNILV 160
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
+ K+A+F + ++ Y + + APE + + + + D ++FGVVL
Sbjct: 161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220
Query: 513 LELIT 517
EL T
Sbjct: 221 YELFT 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
IIN +A M+ I +E++ L+ + H ++I L+ + +V E+ N L D++
Sbjct: 46 IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI 104
Query: 405 HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFS 464
++ + +S R + + Y H VH+D+ N+LLD++L K+A+F
Sbjct: 105 VQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFG 158
Query: 465 FVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVT-PEMDTYAFGVVL 512
S + + + KT+ G+ Y APE + L PE+D ++ GV+L
Sbjct: 159 L--SNIMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 25/269 (9%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSL----SDWLHKKRYPEF 412
+ ++ KE+ + + H L+NL A E D ++YEFM G L +D +K E
Sbjct: 92 KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 151
Query: 413 VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVRE 472
V + V GL ++H YVH D+ NI+ +L F +A +
Sbjct: 152 VEY------MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 202
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL- 531
S K GT + APE E V D ++ GV+ L++G ++ +E L
Sbjct: 203 PK--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 260
Query: 532 --------LAEAVFSMV-EGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPES 582
+ ++ FS + E G + +L DPN + + H + R+ +
Sbjct: 261 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 320
Query: 583 RPSMAEVVSTLMKIQLDVQRSQTLLLERI 611
S + +K + D L RI
Sbjct: 321 PSSRYTKIRDSIKTKYDAWPEPLPPLGRI 349
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 310 SNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRS--------IS 361
+ D LK+Y+ + + T F+ + I+ G VAIK M ++ I
Sbjct: 3 KDYDELLKYYELHE-TIGTGGFAKVKLA-----CHILTGEMVAIKIMDKNTLGSDLPRIK 56
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
E+ LK + H ++ L+ E ++V E+ G L D++ + FR
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR- 115
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
+ + Y+H+ GY H+D+ N+L D+ + KL +F + + +T
Sbjct: 116 --QIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH--LQT 168
Query: 482 AVGTNGYMAPEYME-YGLVTPEMDTYAFGVVLLELITG 518
G+ Y APE ++ + E D ++ G++L L+ G
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 46/282 (16%)
Query: 339 GSVFRGII--NGSTV----AIKCMRRSISKEVN--------LLKKINHFNLINLFGACEH 384
G+V++GI +G V AIK +R + S + N ++ + + L G C
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 385 DGVFYLVYEFMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGY 440
V LV + M G L D + + R + ++W + +A G+ YL +
Sbjct: 91 STV-QLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLEDVR---L 140
Query: 441 VHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVT 500
VH+D+++ N+L+ K+ +F R +E+ Y + V +MA E + T
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK-WMALESILRRRFT 199
Query: 501 PEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQAN 560
+ D +++GV + EL+T Y DG + A + ++E G L P +
Sbjct: 200 HQSDVWSYGVTVWELMTFGAKPY--DG---IPAREIPDLLEKGER------LPQPPI--- 245
Query: 561 KKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKIQLDVQR 602
+ M+ + C + E RP E+VS ++ D QR
Sbjct: 246 ---CTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQR 284
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 23/187 (12%)
Query: 347 NGSTVAIKCMRRSISKEVN---------LLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
G +A+K MRRS +KE N +LK + ++ FG + ++ E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-- 106
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
G+ ++ L KKR + ++ + + L+YL G +H+D+ NILLD+ +
Sbjct: 107 GTCAEKL-KKRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQ 163
Query: 458 AKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP-----EMDTYAFGVVL 512
KL +F V ++ + + G YMAPE ++ T D ++ G+ L
Sbjct: 164 IKLCDFGISGRLVDDK----AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL 219
Query: 513 LELITGK 519
+EL TG+
Sbjct: 220 VELATGQ 226
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 341 VFRGIINGSTVAI---KCMRRSISKEVNLLKKINHFNLINL---FGACEHDGV--FYLVY 392
VF + +G TV I + + + +E+ LL +H N++ L F E + YLV
Sbjct: 54 VFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVT 113
Query: 393 EFMENGSLSDWLHKKRY---PEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E M L+ +H +R P+ + + + I L GLH LH + G VH+D+ GN
Sbjct: 114 ELMRT-DLAQVIHDQRIVISPQHIQY-FMYHILL----GLHVLH---EAGVVHRDLHPGN 164
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEY-MEYGLVTPEMDTYAF 508
ILL N + +F+ RE++ ++ V Y APE M++ T +D ++
Sbjct: 165 ILLADNNDITICDFNL----AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSA 220
Query: 509 GVVLLELITGK 519
G V+ E+ K
Sbjct: 221 GCVMAEMFNRK 231
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 26/249 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L ++Y +
Sbjct: 51 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS--LDL 107
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 108 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 162
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 217
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 218 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 265
Query: 596 IQLDVQRSQ 604
I L+ +++Q
Sbjct: 266 I-LEEEKAQ 273
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 352 AIKCMRRS---------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD 402
AIK +R++ + +EV +LK ++H N++ L+ E +YLV E + G L D
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 403 -WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRA 458
+H+ ++ E + I V G+ YLH VH+D+ N+LL +K+
Sbjct: 126 EIIHRMKFNEVDA----AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALI 178
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K+ +F SAV E K +GT Y+APE + + D ++ GV+L L+ G
Sbjct: 179 KIVDFGL--SAVFENQ--KKMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAG 233
Query: 519 KEAAYKQDGEEILL----AEAVFSMVEGGNAEAKLSVLVDPNLQ-------ANKKEIAHH 567
Q +EIL + F E N L+ LQ + ++ + H
Sbjct: 234 YPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293
Query: 568 LIMLCLACIAREPE-SRPSMAEVVSTLMKIQLDVQRSQTLLL 608
I C +E PS+A + + K Q + +Q LL
Sbjct: 294 WIKEM--CSKKESGIELPSLANAIENMRKFQNSQKLAQAALL 333
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 26/249 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L ++Y +
Sbjct: 82 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS--LDL 138
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 139 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 193
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 248
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 249 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 296
Query: 596 IQLDVQRSQ 604
I L+ +++Q
Sbjct: 297 I-LEEEKAQ 304
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 341 VFRGIINGSTVAI---KCMRRSISKEVNLLKKINHFNLINL---FGACEHDGV--FYLVY 392
VF + +G TV I + + + +E+ LL +H N++ L F E + YLV
Sbjct: 54 VFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVT 113
Query: 393 EFMENGSLSDWLHKKRY---PEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
E M L+ +H +R P+ + + + I L GLH LH + G VH+D+ GN
Sbjct: 114 ELMRT-DLAQVIHDQRIVISPQHIQY-FMYHILL----GLHVLH---EAGVVHRDLHPGN 164
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEY-MEYGLVTPEMDTYAF 508
ILL N + +F+ RE++ ++ V Y APE M++ T +D ++
Sbjct: 165 ILLADNNDITICDFNL----AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSA 220
Query: 509 GVVLLELITGK 519
G V+ E+ K
Sbjct: 221 GCVMAEMFNRK 231
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 26/249 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L ++Y +
Sbjct: 57 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS--LDL 113
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 114 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 168
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 169 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 223
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 224 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 271
Query: 596 IQLDVQRSQ 604
I L+ +++Q
Sbjct: 272 I-LEEEKAQ 279
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 26/249 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L ++Y +
Sbjct: 56 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS--LDL 112
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 113 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 167
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 168 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 222
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 223 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 270
Query: 596 IQLDVQRSQ 604
I L+ +++Q
Sbjct: 271 I-LEEEKAQ 278
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 26/249 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L ++Y +
Sbjct: 59 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS--LDL 115
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 116 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 170
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 225
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 226 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 273
Query: 596 IQLDVQRSQ 604
I L+ +++Q
Sbjct: 274 I-LEEEKAQ 281
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 40/206 (19%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSISK--------EVNLLKKINHFNLINL------FGAC 382
G V R I G VAIK R+ +S E+ ++KK+NH N+++
Sbjct: 29 GYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL 88
Query: 383 EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNC------RFRIAL-DVAHGLHYLHNC 435
+ + L E+ E G L +L++ NC R L D++ L YLH
Sbjct: 89 APNDLPLLAMEYCEGGDLRKYLNQFE-------NCCGLKEGPIRTLLSDISSALRYLH-- 139
Query: 436 TDPGYVHKDISSGNILLD---KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE 492
+ +H+D+ NI+L + L K+ + + + + G T+ VGT Y+APE
Sbjct: 140 -ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTE-FVGTLQYLAPE 194
Query: 493 YMEYGLVTPEMDTYAFGVVLLELITG 518
+E T +D ++FG + E ITG
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 40/206 (19%)
Query: 339 GSVFRGIIN--GSTVAIKCMRRSISK--------EVNLLKKINHFNLINL------FGAC 382
G V R I G VAIK R+ +S E+ ++KK+NH N+++
Sbjct: 28 GYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL 87
Query: 383 EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNC------RFRIAL-DVAHGLHYLHNC 435
+ + L E+ E G L +L++ NC R L D++ L YLH
Sbjct: 88 APNDLPLLAMEYCEGGDLRKYLNQFE-------NCCGLKEGPIRTLLSDISSALRYLH-- 138
Query: 436 TDPGYVHKDISSGNILLD---KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE 492
+ +H+D+ NI+L + L K+ + + + + G T+ VGT Y+APE
Sbjct: 139 -ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTE-FVGTLQYLAPE 193
Query: 493 YMEYGLVTPEMDTYAFGVVLLELITG 518
+E T +D ++FG + E ITG
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 288 AARKDGKREKKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGII 346
A+++ + KKR EDF + R L K+ ++ +A E S + +F+ +
Sbjct: 18 ASKQKNEESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL 72
Query: 347 NGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK 406
+ V + +EV + + H N++ L+G YL+ E+ G++ L K
Sbjct: 73 EKAGV-----EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 407 KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFV 466
+S R A + + L C +H+DI N+LL K+A+F +
Sbjct: 128 ------LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
Query: 467 RSAVREESGYSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
A SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK
Sbjct: 182 VHAP------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 347 NGSTVAIKCMR-------RSISKEVNLLKKINHFNLINLFGACEHDGV--FYLVYEFMEN 397
G+ VA+K ++ R +E+ +LK ++ ++ G G LV E++ +
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIAL---DVAHGLHYL--HNCTDPGYVHKDISSGNILL 452
G L D+L + R S R+ L + G+ YL C VH+D+++ NIL+
Sbjct: 95 GCLRDFLQRHRARLDAS-----RLLLYSSQICKGMEYLGSRRC-----VHRDLAARNILV 144
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
+ K+A+F + ++ + + APE + + + + D ++FGVVL
Sbjct: 145 ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 204
Query: 513 LELIT 517
EL T
Sbjct: 205 YELFT 209
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 353 IKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK--KRYP 410
+ C R +E ++L + + L A + + YLV E+ G L L K +R P
Sbjct: 105 VSCFR----EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIP 160
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
++ RF +A ++ + +H GYVH+DI NILLD+ +LA+F S +
Sbjct: 161 AEMA---RFYLA-EIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG---SCL 210
Query: 471 R-EESGYSSTKTAVGTNGYMAPEYME-------YGLVTPEMDTYAFGVVLLELITGKEAA 522
+ G + AVGT Y++PE ++ G PE D +A GV E+ G+
Sbjct: 211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
Query: 523 Y 523
Y
Sbjct: 271 Y 271
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 339 GSVFRGII---NGST--VAIKCMR------RSISK---EVNLLKKINHFNLINLFGAC-- 382
GSV G + +G++ VA+K M+ R I + E +K +H N+I L G C
Sbjct: 48 GSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
Query: 383 -EHDGV--FYLVYEFMENGSLSDWLHKKRY---PEFVSWNCRFRIALDVAHGLHYLHNCT 436
G+ ++ FM+ G L +L R P+ + + +D+A G+ YL N
Sbjct: 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN-- 165
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEY 496
++H+D+++ N +L ++ +A+F + + Y + A ++A E +
Sbjct: 166 -RNFLHRDLAARNCMLRDDMTVCVADFGLSKK-IYSGDYYRQGRIAKMPVKWIAIESLAD 223
Query: 497 GLVTPEMDTYAFGVVLLELITGKEAAY 523
+ T + D +AFGV + E+ T Y
Sbjct: 224 RVYTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 45/213 (21%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKK--INHFNLINLFGACEH---DGV-- 387
G+V++G ++ VA+K R++ E N+ + + H N+ E DG
Sbjct: 27 GAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86
Query: 388 FYLVYEFMENGSLSDWL--HKKRYPEFVSWNCRFRIALDVAHGLHYLH------NCTDPG 439
+ LV E+ NGSL +L H W R+A V GL YLH + P
Sbjct: 87 YLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA 140
Query: 440 YVHKDISSGNILL---------DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
H+D++S N+L+ D L +L VR + + S VGT YMA
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE----VGTIRYMA 196
Query: 491 PEYMEYGL-------VTPEMDTYAFGVVLLELI 516
PE +E + ++D YA G++ E+
Sbjct: 197 PEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 25/241 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L ++Y +
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS--LDL 110
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 165
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 220
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 221 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 596 I 596
I
Sbjct: 269 I 269
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 25/241 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L ++Y +
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYS--LDL 110
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 165
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 220
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 221 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 596 I 596
I
Sbjct: 269 I 269
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 288 AARKDGKREKKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGII 346
A+++ + KKR EDF + R L K+ ++ +A E S + +F+ +
Sbjct: 9 ASKQKNEESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL 63
Query: 347 NGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK 406
+ V + +EV + + H N++ L+G YL+ E+ G++ L K
Sbjct: 64 EKAGV-----EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 118
Query: 407 KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFV 466
+S R A + + L C +H+DI N+LL K+A+F +
Sbjct: 119 ------LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 172
Query: 467 RSAVREESGYSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
A SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK
Sbjct: 173 VHAP------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 44/213 (20%)
Query: 339 GSVFRGIING-------STVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACE 383
G V++G + G VAIK + R E L ++ H N++ L G
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99
Query: 384 HDGVFYLVYEFMENGSLSDWLHKK-------------------RYPEFVSWNCRFRIALD 424
D +++ + +G L ++L + P+FV +
Sbjct: 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV------HLVAQ 153
Query: 425 VAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVG 484
+A G+ YL + VHKD+++ N+L+ L K+++ R V Y ++
Sbjct: 154 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE-VYAADYYKLLGNSLL 209
Query: 485 TNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
+MAPE + YG + + D +++GVVL E+ +
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 346 INGSTVAIKC--MRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+ VA+K M+R+ I KE+ + K +NH N++ +G + YL E+
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
Query: 398 GSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L D + PE + R + G+ YLH G H+DI N+LLD+
Sbjct: 90 GELFDRIEPDIGMPEPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD 142
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLEL 515
K+++F + R + GT Y+APE ++ E +D ++ G+VL +
Sbjct: 143 NLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
Query: 516 ITGK 519
+ G+
Sbjct: 202 LAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 346 INGSTVAIKC--MRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+ VA+K M+R+ I KE+ + K +NH N++ +G + YL E+
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 398 GSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L D + PE + R + G+ YLH G H+DI N+LLD+
Sbjct: 89 GELFDRIEPDIGMPEPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD 141
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLEL 515
K+++F + R + GT Y+APE ++ E +D ++ G+VL +
Sbjct: 142 NLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Query: 516 ITGK 519
+ G+
Sbjct: 201 LAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 346 INGSTVAIKC--MRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+ VA+K M+R+ I KE+ + K +NH N++ +G + YL E+
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 398 GSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L D + PE + R + G+ YLH G H+DI N+LLD+
Sbjct: 89 GELFDRIEPDIGMPEPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD 141
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLEL 515
K+++F + R + GT Y+APE ++ E +D ++ G+VL +
Sbjct: 142 NLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Query: 516 ITGK 519
+ G+
Sbjct: 201 LAGE 204
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 347 NGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDW--- 403
N ++IK E+ ++ I + + G + Y++YE+MEN S+ +
Sbjct: 77 NNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY 136
Query: 404 --LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLA 461
+ K Y F+ I V + Y+HN + H+D+ NIL+DKN R KL+
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLS 194
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNG---YMAPEYM--EYGLVTPEMDTYAFGVVL 512
+F ES Y K G+ G +M PE+ E ++D ++ G+ L
Sbjct: 195 DFG--------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 44/213 (20%)
Query: 339 GSVFRGIING-------STVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACE 383
G V++G + G VAIK + R E L ++ H N++ L G
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 384 HDGVFYLVYEFMENGSLSDWLHKK-------------------RYPEFVSWNCRFRIALD 424
D +++ + +G L ++L + P+FV +
Sbjct: 83 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV------HLVAQ 136
Query: 425 VAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVG 484
+A G+ YL + VHKD+++ N+L+ L K+++ R V Y ++
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE-VYAADYYKLLGNSLL 192
Query: 485 TNGYMAPEYMEYGLVTPEMDTYAFGVVLLELIT 517
+MAPE + YG + + D +++GVVL E+ +
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-W 403
II S+V ++ EV +LK+++H N++ L+ E +YLV E G L D
Sbjct: 53 IIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI 112
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
+ ++++ E + I V G YLH VH+D+ N+LL+ R L
Sbjct: 113 ILRQKFSEVDA----AVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKI 165
Query: 464 -SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAA 522
F SA E G K +GT Y+APE + + D ++ GV+L L+ G
Sbjct: 166 VDFGLSAHFEVGG--KMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPF 222
Query: 523 YKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPES 582
Q +EIL VE G K S DP + A L+ L L EP
Sbjct: 223 GGQTDQEIL------KRVEKG----KFS--FDPPDWTQVSDEAKQLVKLMLTY---EPSK 267
Query: 583 RPSMAEVVS 591
R S E ++
Sbjct: 268 RISAEEALN 276
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
E +L+K+N +++L A E LV M G L ++ F F A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YA 292
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
++ GL LH V++D+ NILLD + ++++ AV G + K
Sbjct: 293 AEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL---AVHVPEG-QTIKGR 345
Query: 483 VGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
VGT GYMAPE ++ T D +A G +L E+I G ++ ++Q ++I
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG-QSPFQQRKKKI 392
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 3 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 53
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 54 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 106
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+ANF + A
Sbjct: 107 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----- 161
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 162 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 221 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 28/200 (14%)
Query: 339 GSVFRGIINGSTVAIKCM----RRSISKEVNLLKKI--NHFNLINLFGACEHDGV----- 387
G V+ G G VA+K S +E + + + H N++ F A + G
Sbjct: 51 GEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILG-FIAADIKGTGSWTQ 109
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHN-----CTDPGYVH 442
YL+ ++ ENGSL D+L + ++A GL +LH P H
Sbjct: 110 LYLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 443 KDISSGNILLDKNLRAKLANFSFVRSAVREESGYS-STKTAVGTNGYMAPEYMEYGLVTP 501
+D+ S NIL+ KN +A+ + + + T VGT YM PE ++ L
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRN 225
Query: 502 EM------DTYAFGVVLLEL 515
D Y+FG++L E+
Sbjct: 226 HFQSYIMADMYSFGLILWEV 245
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 346 INGSTVAIKC--MRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+ VA+K M+R+ I KE+ + K +NH N++ +G + YL E+
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 398 GSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L D + PE + R + G+ YLH G H+DI N+LLD+
Sbjct: 89 GELFDRIEPDIGMPEPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD 141
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLEL 515
K+++F + R + GT Y+APE ++ E +D ++ G+VL +
Sbjct: 142 NLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Query: 516 ITGK 519
+ G+
Sbjct: 201 LAGE 204
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 20/169 (11%)
Query: 359 SISKEVNLLKKINHFNLINLFGAC--EHDGVFYLVYEFMENG--SLSDWLHKKRYP--EF 412
++ KE+ LL+++ H N+I L E Y+V E+ G + D + +KR+P +
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQA 111
Query: 413 VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVRE 472
+ C+ + GL YLH+ G VHKDI GN+LL K++ V A+
Sbjct: 112 HGYFCQ------LIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALG-VAEALHP 161
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVT---PEMDTYAFGVVLLELITG 518
+ + +T+ G+ + PE + GL T ++D ++ GV L + TG
Sbjct: 162 FAADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 44 AVDCPE-NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 103 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 154
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 44 AVDCPE-NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 103 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 154
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
E +L+K+N +++L A E LV M G L ++ F F A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YA 292
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
++ GL LH V++D+ NILLD + ++++ AV G + K
Sbjct: 293 AEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGL---AVHVPEG-QTIKGR 345
Query: 483 VGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
VGT GYMAPE ++ T D +A G +L E+I G ++ ++Q ++I
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG-QSPFQQRKKKI 392
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 45 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 104 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 155
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 45 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 104 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 155
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 45 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 104 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 155
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 45 AVDCPE-NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 104 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 155
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 44 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 103 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 154
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 4 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--- 55
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 56 --HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 107
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+ANF + A
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----- 162
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 163 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 222 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 339 GSVFRGIINGS--TVAIKCM--------RRSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G V++GI N + VAIK + I +E+ +L + + + FG+
Sbjct: 33 GEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKL 92
Query: 389 YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
+++ E++ GS D L P + I ++ GL YLH+ +H+DI +
Sbjct: 93 WIIMEYLGGGSALDLLK----PGPLEETYIATILREILKGLDYLHSERK---IHRDIKAA 145
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAF 508
N+LL + KLA+F + VGT +MAPE ++ + D ++
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLTDTQI---KRNXFVGTPFWMAPEVIKQSAYDFKADIWSL 202
Query: 509 GVVLLELITGK 519
G+ +EL G+
Sbjct: 203 GITAIELAKGE 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 346 INGSTVAIKC--MRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+ VA+K M+R+ I KE+ + K +NH N++ +G + YL E+
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 398 GSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L D + PE + R + G+ YLH G H+DI N+LLD+
Sbjct: 89 GELFDRIEPDIGMPEPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD 141
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLEL 515
K+++F + R + GT Y+APE ++ E +D ++ G+VL +
Sbjct: 142 NLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Query: 516 ITGK 519
+ G+
Sbjct: 201 LAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 43 AVDCPE-NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 101
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 102 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 153
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 44 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 103 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 154
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 346 INGSTVAIKC--MRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+ VA+K M+R+ I KE+ + K +NH N++ +G + YL E+
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 398 GSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L D + PE + R + G+ YLH G H+DI N+LLD+
Sbjct: 89 GELFDRIEPDIGMPEPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD 141
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLEL 515
K+++F + R + GT Y+APE ++ E +D ++ G+VL +
Sbjct: 142 NLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Query: 516 ITGK 519
+ G+
Sbjct: 201 LAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 44 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 103 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 154
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 45 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 104 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 155
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 346 INGSTVAIKC--MRRS------ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+ VA+K M+R+ I KE+ + K +NH N++ +G + YL E+
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
Query: 398 GSLSDWLHKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL 456
G L D + PE + R + G+ YLH G H+DI N+LLD+
Sbjct: 89 GELFDRIEPDIGMPEPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD 141
Query: 457 RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLEL 515
K+++F + R + GT Y+APE ++ E +D ++ G+VL +
Sbjct: 142 NLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Query: 516 ITGK 519
+ G+
Sbjct: 201 LAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 44 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 103 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 154
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + K +NH N++ +G + YL E+ G L D + P
Sbjct: 45 AVDC-PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 104 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 155
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 25/241 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L +++ +
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS--LDL 490
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 491 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 545
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 600
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 601 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 648
Query: 596 I 596
I
Sbjct: 649 I 649
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 362 KEVNLLKKINHFNLINLFGACEHD--------GVFYLVYEFMEN---GSLSDWLHKKRYP 410
+E+ +L+ + H N++NL C G YLV++F E+ G LS+ L K
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS-A 469
E R+ + +GL+Y+H +H+D+ + N+L+ ++ KLA+F R+ +
Sbjct: 126 EIK------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 470 VREESGYSSTKTAVGTNGYMAPEYM----EYGLVTPEMDTYAFGVVLLELIT 517
+ + S + V T Y PE + +YG P +D + G ++ E+ T
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWT 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 24/225 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 6 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 56
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G + L K +S
Sbjct: 57 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------LSK 109
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 164
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK
Sbjct: 165 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSD-W 403
II S+V ++ EV +LK+++H N++ L+ E +YLV E G L D
Sbjct: 36 IIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI 95
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
+ ++++ E + I V G YLH VH+D+ N+LL+ R L
Sbjct: 96 ILRQKFSEVDA----AVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKI 148
Query: 464 -SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAA 522
F SA E G K +GT Y+APE + + D ++ GV+L L+ G
Sbjct: 149 VDFGLSAHFEVGG--KMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPF 205
Query: 523 YKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPES 582
Q +EIL VE G K S DP + A L+ L L EP
Sbjct: 206 GGQTDQEIL------KRVEKG----KFS--FDPPDWTQVSDEAKQLVKLMLTY---EPSK 250
Query: 583 RPSMAEVVS 591
R S E ++
Sbjct: 251 RISAEEALN 259
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 362 KEVNLLKKINHFNLINLFGACEHD--------GVFYLVYEFMEN---GSLSDWLHKKRYP 410
+E+ +L+ + H N++NL C G YLV++F E+ G LS+ L K
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS-A 469
E R+ + +GL+Y+H +H+D+ + N+L+ ++ KLA+F R+ +
Sbjct: 126 EIK------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 470 VREESGYSSTKTAVGTNGYMAPEYM----EYGLVTPEMDTYAFGVVLLELIT 517
+ + S + V T Y PE + +YG P +D + G ++ E+ T
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 362 KEVNLLKKINHFNLINLFGACEHD--------GVFYLVYEFMEN---GSLSDWLHKKRYP 410
+E+ +L+ + H N++NL C G YLV++F E+ G LS+ L K
Sbjct: 65 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 124
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS-A 469
E R+ + +GL+Y+H +H+D+ + N+L+ ++ KLA+F R+ +
Sbjct: 125 EIK------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFS 175
Query: 470 VREESGYSSTKTAVGTNGYMAPEYM----EYGLVTPEMDTYAFGVVLLELIT 517
+ + S + V T Y PE + +YG P +D + G ++ E+ T
Sbjct: 176 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWT 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 358 RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNC 417
R++ KE+ +++ + H L+NL+ + + + ++V + + G L H ++ F
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKEETV 117
Query: 418 RFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS 477
+ I ++ L YL N +H+D+ NILLD++ + +F+ RE +
Sbjct: 118 KLFIC-ELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----T 169
Query: 478 STKTAVGTNGYMAPEYME------YGLVTPEMDTYAFGVVLLELITGK 519
T GT YMAPE Y +D ++ GV EL+ G+
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFA---VDWWSLGVTAYELLRGR 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR-----YPEFVS 414
+ +E ++ + H +++ L DG+ Y+V+EFM+ L + K+ Y E V+
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVR 471
+ +I L L C D +H+D+ N+LL + + KL +F +
Sbjct: 133 SHYMRQI-------LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGV--AIQL 183
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
ESG + VGT +MAPE ++ +D + GV+L L++G
Sbjct: 184 GESGLVAGGR-VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 358 RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL-HKKRYPEFVSWN 416
I E+ +LK ++H N+I +F E Y+V E E G L + + + + +S
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL-DKNLRAKLANFSFVRSAVREESG 475
+ + + L Y H+ VHKD+ NIL D + + + F + + +
Sbjct: 125 YVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
+S+ A GT YMAPE + VT + D ++ GVV+ L+TG EE+
Sbjct: 182 HST--NAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV----- 233
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ + +PN + + + L + ++PE RPS A+V+
Sbjct: 234 -----------QQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 24/273 (8%)
Query: 302 PEDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSIS 361
P + + + R L K+ ++ +A E S + +F+ + + V +
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-----EHQLR 56
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
+EV + + H N++ L+G YL+ E+ G++ L K +S R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRT 110
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
A + + L C +H+DI N+LL K+A+F + A SS +T
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------SSRRT 164
Query: 482 AV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEILLAEAV 536
+ GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I E
Sbjct: 165 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 537 FSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
F A +S L+ +P+ + +E+ H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 44/285 (15%)
Query: 297 KKRNLPEDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCM 356
K++ EDF ++ R L K+ ++ +A E S + +F+ + + V
Sbjct: 6 KRQWTLEDF-----DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE---- 56
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK-KRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K R+ E
Sbjct: 57 -HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ--- 112
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL N K+A+F + A
Sbjct: 113 ----RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP----- 163
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG----KEAAYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + G + Y++ I
Sbjct: 164 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
Query: 531 LLAEAVFS--MVEGG----------NAEAKLS---VLVDPNLQAN 560
E F + EG NA +L+ VL P ++AN
Sbjct: 223 SRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Query: 288 AARKDGKREKKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGII 346
A+++ + KKR EDF + R L K+ ++ +A E S + +F+ +
Sbjct: 18 ASKQKNEESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL 72
Query: 347 NGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK 406
+ V + +EV + + H N++ L+G YL+ E+ G++ L K
Sbjct: 73 EKAGV-----EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 407 KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFV 466
+S R A + + L C +H+DI N+LL K+A+F +
Sbjct: 128 ------LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
Query: 467 RSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
A S GT Y+ PE +E + ++D ++ GV+ E + GK
Sbjct: 182 VHAPS-----SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 42/284 (14%)
Query: 297 KKRNLPEDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCM 356
K++ EDF ++ R L K+ ++ +A E S + +F+ + + V
Sbjct: 6 KRQWTLEDF-----DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE---- 56
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK-KRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K R+ E
Sbjct: 57 -HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ--- 112
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL N K+A+F + +V S
Sbjct: 113 ----RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW---SVHAPS- 164
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG----KEAAYKQDGEEIL 531
S T GT Y+ PE +E + ++D ++ GV+ E + G + Y++ I
Sbjct: 165 -SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 532 LAEAVFS--MVEGG----------NAEAKLS---VLVDPNLQAN 560
E F + EG NA +L+ VL P ++AN
Sbjct: 224 RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 358 RSISKEVNLLKKINHFNLINLFG------ACEHDGVFYLVYEFM--------ENGSLSDW 403
R +E+ LLK + H N+I L + E YLV M ++ +LSD
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD- 130
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
E V + + + GL Y+H+ G +H+D+ N+ ++++ ++ +F
Sbjct: 131 -------EHVQF-----LVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDF 175
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
R A E +GY V T Y APE M + +D ++ G ++ EL+ GK
Sbjct: 176 GLARQADEEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 44/271 (16%)
Query: 339 GSVFRGIINGST-----VAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHD 385
G V+ G+ VA+K ++ + E ++K ++H +++ L G E +
Sbjct: 22 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE 81
Query: 386 GVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH--NCTDPGYVHK 443
+++ E G L +L + + V + +L + + YL NC VH+
Sbjct: 82 PT-WIIMELYPYGELGHYLERNKNSLKVLTLVLY--SLQICKAMAYLESINC-----VHR 133
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
DI+ NIL+ KL +F R + +E Y ++ T + +M+PE + + T
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIK-WMSPESINFRRFTTAS 191
Query: 504 DTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKK 562
D + F V + E+++ GK+ + + ++++ ++E G+ K P+L
Sbjct: 192 DVWMFAVCMWEILSFGKQPFFWLENKDVI------GVLEKGDRLPK------PDL----- 234
Query: 563 EIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L C +P RP E+V +L
Sbjct: 235 -CPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 356 MRRSISKEVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
+R + +EV +L + H N++ L E + FYLV+E M GS+ +HK+R+ +
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE 112
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR---AKLANFSFVRSAVR 471
+ + DVA L +LHN G H+D+ NIL + + K+ +F + S ++
Sbjct: 113 ASV---VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFD-LGSGIK 165
Query: 472 EESGYSSTK-----TAVGTNGYMAPEYM-----EYGLVTPEMDTYAFGVVLLELITG 518
S T G+ YMAPE + E + D ++ GV+L L++G
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 356 MRRSISKEVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVS 414
+R + +EV +L + H N++ L E + FYLV+E M GS+ +HK+R+ +
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELE 112
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR---AKLANFSFVRSAVR 471
+ + DVA L +LHN G H+D+ NIL + + K+ +F + S ++
Sbjct: 113 ASV---VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFG-LGSGIK 165
Query: 472 EESGYSSTK-----TAVGTNGYMAPEYM-----EYGLVTPEMDTYAFGVVLLELITG 518
S T G+ YMAPE + E + D ++ GV+L L++G
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 367 LKKINHFNLINLFGACEHDG---VFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIAL 423
+++++ F+ N G + Y+ + +L DW++++ E I +
Sbjct: 112 IRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI 171
Query: 424 DVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREES--------- 474
+A + +LH+ G +H+D+ NI + K+ +F V + ++E
Sbjct: 172 QIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELI 516
Y++ VGT YM+PE + + ++D ++ G++L EL+
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 4 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 54
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 55 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 107
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 162
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 163 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 222 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 44/271 (16%)
Query: 339 GSVFRGIINGST-----VAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHD 385
G V+ G+ VA+K ++ + E ++K ++H +++ L G E +
Sbjct: 38 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE 97
Query: 386 GVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH--NCTDPGYVHK 443
+++ E G L +L + + V + +L + + YL NC VH+
Sbjct: 98 PT-WIIMELYPYGELGHYLERNKNSLKVLTLVLY--SLQICKAMAYLESINC-----VHR 149
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
DI+ NIL+ KL +F R + +E Y ++ T + +M+PE + + T
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIK-WMSPESINFRRFTTAS 207
Query: 504 DTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKK 562
D + F V + E+++ GK+ + + ++++ ++E G+ K P+L
Sbjct: 208 DVWMFAVCMWEILSFGKQPFFWLENKDVI------GVLEKGDRLPK------PDL----- 250
Query: 563 EIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L C +P RP E+V +L
Sbjct: 251 -CPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 24/273 (8%)
Query: 302 PEDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSIS 361
P + + + R L K+ ++ +A E S + +F+ + + V +
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-----EHQLR 56
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
+EV + + H N++ L+G YL+ E+ G++ L K +S R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRT 110
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
A + + L C +H+DI N+LL K+A+F + A SS +T
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------SSRRT 164
Query: 482 AV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEILLAEAV 536
+ GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I E
Sbjct: 165 ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 537 FSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
F A +S L+ +P+ + +E+ H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 347 NGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
G VA+K +R + +E++LLK+++H N+++L + LV+EFME
Sbjct: 44 QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
KK E + +I + + L + +C +H+D+ N+L++ +
Sbjct: 104 DL------KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA 157
Query: 458 AKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYGLVTPEMDTYAFGVVLLELI 516
KLA+F R+ Y+ V T Y AP+ M + +D ++ G + E+I
Sbjct: 158 LKLADFGLARAFGIPVRSYTH---EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214
Query: 517 TGK 519
TGK
Sbjct: 215 TGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 347 NGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
G VA+K +R + +E++LLK+++H N+++L + LV+EFME
Sbjct: 44 QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
KK E + +I + + L + +C +H+D+ N+L++ +
Sbjct: 104 DL------KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA 157
Query: 458 AKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYGLVTPEMDTYAFGVVLLELI 516
KLA+F R+ Y+ V T Y AP+ M + +D ++ G + E+I
Sbjct: 158 LKLADFGLARAFGIPVRSYTH---EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI 214
Query: 517 TGK 519
TGK
Sbjct: 215 TGK 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 28/278 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 2 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 52
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 53 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 105
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---- 161
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEIL 531
S T GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 162 -SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 532 LAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 221 RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH--KKRYPEFVSWNCRFR 420
E +L K++ +++L A E LV M G + ++ + P F F
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTK 480
A + GL +LH +++D+ N+LLD + ++++ AV ++G + TK
Sbjct: 295 TA-QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTK 347
Query: 481 TAVGTNGYMAPEYM---EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
GT G+MAPE + EY +D +A GV L E+I + ++ GE++
Sbjct: 348 GYAGTPGFMAPELLLGEEYDF---SVDYFALGVTLYEMIAAR-GPFRARGEKV------- 396
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESR 583
N E K VL +K A C A + ++PE R
Sbjct: 397 -----ENKELKQRVLEQAVTYPDKFSPASK--DFCEALLQKDPEKR 435
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH--KKRYPEFVSWNCRFR 420
E +L K++ +++L A E LV M G + ++ + P F F
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTK 480
A + GL +LH +++D+ N+LLD + ++++ AV ++G + TK
Sbjct: 295 TA-QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTK 347
Query: 481 TAVGTNGYMAPEYM---EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
GT G+MAPE + EY +D +A GV L E+I + ++ GE++
Sbjct: 348 GYAGTPGFMAPELLLGEEYDF---SVDYFALGVTLYEMIAAR-GPFRARGEKV------- 396
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESR 583
N E K VL +K A C A + ++PE R
Sbjct: 397 -----ENKELKQRVLEQAVTYPDKFSPASK--DFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH--KKRYPEFVSWNCRFR 420
E +L K++ +++L A E LV M G + ++ + P F F
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTK 480
A + GL +LH +++D+ N+LLD + ++++ AV ++G + TK
Sbjct: 295 TA-QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTK 347
Query: 481 TAVGTNGYMAPEYM---EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
GT G+MAPE + EY +D +A GV L E+I + ++ GE++
Sbjct: 348 GYAGTPGFMAPELLLGEEYDF---SVDYFALGVTLYEMIAAR-GPFRARGEKV------- 396
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESR 583
N E K VL +K A C A + ++PE R
Sbjct: 397 -----ENKELKQRVLEQAVTYPDKFSPASK--DFCEALLQKDPEKR 435
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLH--KKRYPEFVSWNCRFR 420
E +L K++ +++L A E LV M G + ++ + P F F
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTK 480
A + GL +LH +++D+ N+LLD + ++++ AV ++G + TK
Sbjct: 295 TA-QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGL---AVELKAGQTKTK 347
Query: 481 TAVGTNGYMAPEYM---EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
GT G+MAPE + EY +D +A GV L E+I + ++ GE++
Sbjct: 348 GYAGTPGFMAPELLLGEEYDF---SVDYFALGVTLYEMIAAR-GPFRARGEKV------- 396
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESR 583
N E K VL +K A C A + ++PE R
Sbjct: 397 -----ENKELKQRVLEQAVTYPDKFSPASK--DFCEALLQKDPEKR 435
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 24/225 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 6 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 56
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 57 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 109
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 164
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK
Sbjct: 165 -SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 44/271 (16%)
Query: 339 GSVFRGIINGST-----VAIKCMRRSIS--------KEVNLLKKINHFNLINLFGACEHD 385
G V+ G+ VA+K ++ + E ++K ++H +++ L G E +
Sbjct: 26 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE 85
Query: 386 GVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLH--NCTDPGYVHK 443
+++ E G L +L + + V + +L + + YL NC VH+
Sbjct: 86 PT-WIIMELYPYGELGHYLERNKNSLKVLTLVLY--SLQICKAMAYLESINC-----VHR 137
Query: 444 DISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEM 503
DI+ NIL+ KL +F R + +E Y ++ T + +M+PE + + T
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIK-WMSPESINFRRFTTAS 195
Query: 504 DTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKK 562
D + F V + E+++ GK+ + + ++++ ++E G+ K P+L
Sbjct: 196 DVWMFAVCMWEILSFGKQPFFWLENKDVI------GVLEKGDRLPK------PDL----- 238
Query: 563 EIAHHLIMLCLACIAREPESRPSMAEVVSTL 593
L L C +P RP E+V +L
Sbjct: 239 -CPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 358 RSISKEVNLLKKINHFNLINLFG------ACEHDGVFYLVYEFM--------ENGSLSDW 403
R +E+ LLK + H N+I L + E YLV M + +LSD
Sbjct: 64 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD- 122
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
E V + + + GL Y+H+ G +H+D+ N+ ++++ ++ +F
Sbjct: 123 -------EHVQF-----LVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 167
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
R A E +GY V T Y APE M + +D ++ G ++ EL+ GK
Sbjct: 168 GLARQADEEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 4 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--- 55
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK------KRY 409
+ +EV + + H N++ L+G YL+ E+ G++ L K +R
Sbjct: 56 --HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 410 PEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSA 469
+++ ++A+ L Y C +H+DI N+LL K+A+F + A
Sbjct: 114 ATYIT---------ELANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 470 VREESGYSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYK 524
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y+
Sbjct: 162 P------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 525 QDGEEILLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
+ + I E F A +S L+ +P+ + +E+ H
Sbjct: 216 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 53/307 (17%)
Query: 320 KYEDLVVATENFSPKNMID----GSVFRGII---NGS--TVAIKCMRRSIS--------- 361
K ED+++ + F+ M+ GSV + +GS VA+K ++ I
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 362 KEVNLLKKINHFNLINLFG------ACEHDGVFYLVYEFMENGSLSDWLHKKRY---PEF 412
+E +K+ +H ++ L G A + ++ FM++G L +L R P
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 413 VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVRE 472
+ R +D+A G+ YL + ++H+D+++ N +L +++ +A+F R
Sbjct: 134 LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILL 532
+ + + ++A E + L T D +AFGV + E++T + Y G E
Sbjct: 191 DYYRQGCASKLPVK-WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA--GIE--- 244
Query: 533 AEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVST 592
NAE + L+ N E + L C + +P+ RPS T
Sbjct: 245 -----------NAEI-YNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSF-----T 287
Query: 593 LMKIQLD 599
++++L+
Sbjct: 288 CLRMELE 294
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 1 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--- 52
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 53 --HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 104
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 159
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 160 -SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 219 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 35/224 (15%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 11 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-----EHQLRR 60
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK------KRYPEFVSWN 416
EV + + H N++ L+G YL+ E+ G++ L K +R +++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-- 118
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
++A+ L Y C +H+DI N+LL K+A+F + A
Sbjct: 119 -------ELANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------ 162
Query: 477 SSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
SS + A+ GT Y+ PE +E + ++D ++ GV+ E + GK
Sbjct: 163 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 320 KYEDLVVATENFSPKNM---IDGSVFRGIINGSTVAIKCM-------RRSISKEVNLLKK 369
K+ED+ T + + G+V + NG A+K + R + +EV L +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAV--SLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 370 IN-HFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCR--FRIALDVA 426
+ N++ L E D FYLV+E ++ GS+ + K+++ +N R R+ DVA
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-----FNEREASRVVRDVA 121
Query: 427 HGLHYLHNCTDPGYVHKDISSGNILLDKNLR---AKLANFSFVRSAVREESGYSST---- 479
L +LH G H+D+ NIL + + K+ +F S T
Sbjct: 122 AALDFLHT---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 480 KTAVGTNGYMAPEYMEY-----GLVTPEMDTYAFGVVLLELITG 518
T G+ YMAPE +E D ++ GVVL +++G
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 2 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 52
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 53 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 105
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 160
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 161 -SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 220 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M L++ + ++ + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLM-GADLNNIVKXQK---LTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDXELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 7 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-----HQLRR 56
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
EV + + H N++ L+G YL+ E+ G++ L K +S R A
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTA 110
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
+ + L C +H+DI N+LL K+A+F + A SS +T
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------SSRRTT 164
Query: 483 V-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEILLAEAVF 537
+ GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I E F
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 224
Query: 538 SMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
A +S L+ +P+ + +E+ H
Sbjct: 225 PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 256
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+M G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ K+A+F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 8 EDF-----EIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGV-----EHQLRR 57
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
EV + + H N++ L+G YL+ E+ G++ L K +S R A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK------LSKFDEQRTA 111
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
+ + L C +H+DI N+LL K+A+F + A SS + A
Sbjct: 112 TYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP------SSRRAA 165
Query: 483 V-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EAAYKQD 526
+ GT Y+ PE +E + ++D ++ GV+ E + GK EA QD
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+M G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ K+A+F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 6 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 56
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 57 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 109
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 164
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 165 -SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 224 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 348 GSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACE--HDGVFYLVYEFMENGSLSDWLH 405
G + + + +E+ +LKK++H N++ L + ++ Y+V+E + G + +
Sbjct: 71 GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 406 KKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSF 465
K E RF D+ G+ YLH +H+DI N+L+ ++ K+A+F
Sbjct: 131 LKPLSED---QARFYFQ-DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGV 183
Query: 466 VRSAVREESGYSSTKTAVGTNGYMAPEYMEYG---LVTPEMDTYAFGVVLLELITGK 519
++ S+T VGT +MAPE + +D +A GV L + G+
Sbjct: 184 SNEFKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 113 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 164
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 165 VNEDCELKILDFGLARHTADEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 219 IMAELLTGR 227
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 2 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 52
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 53 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 105
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP----- 160
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 161 -SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 220 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 113 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 164
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 165 VNEDCELKILDFGLARHTADEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 219 IMAELLTGR 227
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 11/170 (6%)
Query: 352 AIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKK-RYP 410
A+ C +I KE+ + +NH N++ +G + YL E+ G L D + P
Sbjct: 45 AVDC-PENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAV 470
E + R + G+ YLH G H+DI N+LLD+ K+++F +
Sbjct: 104 EPDA----QRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLA-TVF 155
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGK 519
R + GT Y+APE ++ E +D ++ G+VL ++ G+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 36/194 (18%)
Query: 345 IINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFY 389
+ +G +A+K + R +E+ LLK + H N+I L + E Y
Sbjct: 73 VKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVY 132
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
LV M L++ + ++ + +F I + GL Y+H+ +H+D+ N
Sbjct: 133 LVTHLM-GADLNNIVKCQK---LTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSN 184
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE----YMEYGLVTPEMDT 505
+ ++++ K+ +F R E +GY V T Y APE +M Y + +D
Sbjct: 185 LAVNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNMT---VDI 235
Query: 506 YAFGVVLLELITGK 519
++ G ++ EL+TG+
Sbjct: 236 WSVGCIMAELLTGR 249
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 113 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 164
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 165 VNEDCELKILDFGLARHTADEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 219 IMAELLTGR 227
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 6 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 56
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 57 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 109
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 164
Query: 476 YSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEI 530
SS +T + GT Y+ PE +E ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 165 -SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 531 LLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 224 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLEH 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 25/241 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L +++ +
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS--LDL 110
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ KL +F R E+S
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDST 165
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 220
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 221 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 596 I 596
I
Sbjct: 269 I 269
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M L++ + ++ + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLM-GADLNNIVKXQK---LTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 12 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-----EHQLRR 61
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
EV + + H N++ L+G YL+ E+ G++ L K +S R A
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTA 115
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
+ + L C +H+DI N+LL K+A+F + A SS +T
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------SSRRTT 169
Query: 483 V-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEILLAEAVF 537
+ GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I E F
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 229
Query: 538 SMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
A +S L+ +P+ + +E+ H
Sbjct: 230 PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 8 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-----HQLRR 57
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
EV + + H N++ L+G YL+ E+ G++ L K +S R A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTA 111
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
+ + L C +H+DI N+LL K+A+F + A SS +T
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------SSRRTX 165
Query: 483 V-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEILLAEAVF 537
+ GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I E F
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 538 SMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
A +S L+ +P+ + +E+ H
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 41/278 (14%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 8 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-----EHQLRR 57
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK------KRYPEFVSWN 416
EV + + H N++ L+G YL+ E+ G++ L K +R +++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-- 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
++A+ L Y C +H+DI N+LL K+A+F + A
Sbjct: 116 -------ELANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------ 159
Query: 477 SSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEIL 531
SS + A+ GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 532 LAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 220 RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 359 SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK------KRYPEF 412
+ +EV + + H N++ L+G YL+ E+ G++ L K +R +
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 110
Query: 413 VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVRE 472
++ ++A+ L Y C +H+DI N+LL K+A+F + A
Sbjct: 111 IT---------ELANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 156
Query: 473 ESGYSSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDG 527
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++
Sbjct: 157 ----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 212
Query: 528 EEILLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
+ I E F A +S L+ +P+ + +E+ H
Sbjct: 213 KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 25/241 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L +++ +
Sbjct: 54 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS--LDL 110
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ N KL +F R E+S
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDST 165
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
+MAPE + + T D + FGV + E++ ++ +
Sbjct: 166 XXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 220
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 221 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 268
Query: 596 I 596
I
Sbjct: 269 I 269
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 41/278 (14%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 8 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-----EHQLRR 57
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK------KRYPEFVSWN 416
EV + + H N++ L+G YL+ E+ G++ L K +R +++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-- 115
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
++A+ L Y C +H+DI N+LL K+A+F + A
Sbjct: 116 -------ELANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP------ 159
Query: 477 SSTKTAV-GTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEIL 531
SS +T + GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 532 LAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 220 RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 25/241 (10%)
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R +E +++ +H +++ L G + V +++ E G L +L +++ +
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS--LDL 490
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
A ++ L YL + +VH+DI++ N+L+ KL +F R E+S
Sbjct: 491 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDST 545
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEA 535
Y +MAPE + + T D + FGV + E++ ++ +
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNND 600
Query: 536 VFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMK 595
V +E G + + PN L L C A +P RP E+ + L
Sbjct: 601 VIGRIENGE-----RLPMPPNCPPT-------LYSLMTKCWAYDPSRRPRFTELKAQLST 648
Query: 596 I 596
I
Sbjct: 649 I 649
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 22/224 (9%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 6 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 56
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G + L K +S
Sbjct: 57 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------LSK 109
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---- 165
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
S GT Y+ PE +E + ++D ++ GV+ E + GK
Sbjct: 166 -SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+ + E++++ +++H NLI L+ A E LV E+++ G L D + + Y ++
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LTEL 187
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL-LDKNLRA-KLANFSFVRSAVREES 474
+ G+ ++H +H D+ NIL ++++ + K+ +F R E
Sbjct: 188 DTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE- 243
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K GT ++APE + Y V+ D ++ GV+ L++G
Sbjct: 244 ---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGV--------FYLVYEFMEN---GSLSDWLHKKRYP 410
+E+ +L+ + H N++NL C YLV++F E+ G LS+ L K
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS 125
Query: 411 EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS-A 469
E R+ + +GL+Y+H +H+D+ + N+L+ ++ KLA+F R+ +
Sbjct: 126 EIK------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFS 176
Query: 470 VREESGYSSTKTAVGTNGYMAPEYM----EYGLVTPEMDTYAFGVVLLELIT 517
+ + S + V T Y PE + +YG P +D + G ++ E+ T
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWT 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 358 RSISKEVNLLKKINHFNLINLFG------ACEHDGVFYLVYEFM--------ENGSLSDW 403
R +E+ LLK + H N+I L + E YLV M + +LSD
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD- 130
Query: 404 LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
E V + + + GL Y+H+ G +H+D+ N+ ++++ ++ +F
Sbjct: 131 -------EHVQF-----LVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDF 175
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
R A E +GY V T Y APE M + +D ++ G ++ EL+ GK
Sbjct: 176 GLARQADEEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 22 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 81
Query: 382 CEHDGVFYLVYEFME-----------NGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E ME G+L + L + + W V +
Sbjct: 82 FERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 128
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 129 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 181
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 228
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 229 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 256
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 116
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 117 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 168
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 169 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 222
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 223 MAELLTGR 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 42 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 102 THLMG----ADLNNIVKCAKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 153
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 154 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 208 IMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 112 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 163
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 164 NEDXELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 218 MAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M L++ + ++ + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLM-GADLNNIVKSQK---LTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDSELKILDFGLCRHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 112 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 163
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 164 NEDXELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 218 MAELLTGR 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 39/227 (17%)
Query: 325 VVATENFSPKNMID----GSVF--RGIINGSTVAIKCMRRSIS---------KEVNLLKK 369
+V ENF I G V+ R + G VA+K +R +E++LLK+
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 370 INHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG- 428
+NH N++ L + YLV+EF+ +F+ + I L +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQD----------LKKFMDASALTGIPLPLIKSY 112
Query: 429 ----LHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVG 484
L L C +H+D+ N+L++ KLA+F R+ Y+ V
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---EVV 169
Query: 485 TNGYMAPEYM---EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGE 528
T Y APE + +Y + +D ++ G + E++T + A + D E
Sbjct: 170 TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 213
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 66 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 126 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 177
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 178 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 232 IMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 126 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 177
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 178 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 232 MAELLTGR 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 103 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 154
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 155 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 209 MAELLTGR 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGL-VTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNAMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 28/278 (10%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 3 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---- 53
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+ +EV + + H N++ L+G YL+ E+ G++ L K +S
Sbjct: 54 -EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSK 106
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
R A + + L C +H+DI N+LL K+A+F + A
Sbjct: 107 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---- 162
Query: 476 YSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEIL 531
S GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I
Sbjct: 163 -SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 532 LAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
E F A +S L+ +P+ + +E+ H
Sbjct: 222 RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYGLVTPEMDTYA 507
N+L++ KLA+F R+ Y+ V T Y APE + + +D ++
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGXKYYSTAVDIWS 189
Query: 508 FGVVLLELITGKEAAYKQDGE 528
G + E++T + A + D E
Sbjct: 190 LGCIFAEMVT-RRALFPGDSE 209
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 113 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 164
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 165 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 219 MAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 113 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 164
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 165 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 219 IMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 118 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 169
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 170 NEDXELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 224 MAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 112 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 163
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 164 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 218 MAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 105
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 106 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 157
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 158 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 211
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 212 MAELLTGR 219
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 30 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 89
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ + +F+ + I L + L L C +H+D+
Sbjct: 90 FLH----------QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 139
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYGLVTPEMDTYA 507
N+L++ KLA+F R+ Y+ V T Y APE + + +D ++
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGXKYYSTAVDIWS 196
Query: 508 FGVVLLELITGKEAAYKQDGE 528
G + E++T + A + D E
Sbjct: 197 LGCIFAEMVT-RRALFPGDSE 216
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 48 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 108 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 159
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 160 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 214 IMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 48 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 108 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 159
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 160 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 214 IMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 109 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 160
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 161 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 215 MAELLTGR 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 345 IINGSTVAIKCMRRS-----ISKEVNLLKKINHFNLI---NLFGACEHDGVFYLVYEFME 396
II+ AI R + + E+ +LKK+NH +I N F A + +Y+V E ME
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED----YYIVLELME 97
Query: 397 NGSLSD-WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D + KR E +++ L V YLH + G +H+D+ N+LL
Sbjct: 98 GGELFDKVVGNKRLKEATCKLYFYQMLLAV----QYLH---ENGIIHRDLKPENVLLSSQ 150
Query: 456 LRAKLANFS-FVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLV--TPEMDTYAFGVV 511
L + F S + E+ S +T GT Y+APE + G +D ++ GV+
Sbjct: 151 EEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 512 LLELITG 518
L ++G
Sbjct: 209 LFICLSG 215
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFYLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 43 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 103 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 154
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 155 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 209 IMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 58 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 118 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 169
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 170 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 224 IMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 58 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 118 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 169
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 170 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 224 IMAELLTGR 232
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 66 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 126 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 177
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 178 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 232 IMAELLTGR 240
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 345 IINGSTVAIKCMRRS-----ISKEVNLLKKINHFNLI---NLFGACEHDGVFYLVYEFME 396
II+ AI R + + E+ +LKK+NH +I N F A + +Y+V E ME
Sbjct: 48 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED----YYIVLELME 103
Query: 397 NGSLSD-WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D + KR E +++ L V YLH + G +H+D+ N+LL
Sbjct: 104 GGELFDKVVGNKRLKEATCKLYFYQMLLAV----QYLH---ENGIIHRDLKPENVLLSSQ 156
Query: 456 LRAKLANFS-FVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLV--TPEMDTYAFGVV 511
L + F S + E+ S +T GT Y+APE + G +D ++ GV+
Sbjct: 157 EEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 214
Query: 512 LLELITG 518
L ++G
Sbjct: 215 LFICLSG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 345 IINGSTVAIKCMRRS-----ISKEVNLLKKINHFNLI---NLFGACEHDGVFYLVYEFME 396
II+ AI R + + E+ +LKK+NH +I N F A + +Y+V E ME
Sbjct: 41 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED----YYIVLELME 96
Query: 397 NGSLSD-WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D + KR E +++ L V YLH + G +H+D+ N+LL
Sbjct: 97 GGELFDKVVGNKRLKEATCKLYFYQMLLAV----QYLH---ENGIIHRDLKPENVLLSSQ 149
Query: 456 LRAKLANFS-FVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLV--TPEMDTYAFGVV 511
L + F S + E+ S +T GT Y+APE + G +D ++ GV+
Sbjct: 150 EEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 207
Query: 512 LLELITG 518
L ++G
Sbjct: 208 LFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 345 IINGSTVAIKCMRRS-----ISKEVNLLKKINHFNLI---NLFGACEHDGVFYLVYEFME 396
II+ AI R + + E+ +LKK+NH +I N F A + +Y+V E ME
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED----YYIVLELME 97
Query: 397 NGSLSD-WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D + KR E +++ L V YLH + G +H+D+ N+LL
Sbjct: 98 GGELFDKVVGNKRLKEATCKLYFYQMLLAV----QYLH---ENGIIHRDLKPENVLLSSQ 150
Query: 456 LRAKLANFS-FVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLV--TPEMDTYAFGVV 511
L + F S + E+ S +T GT Y+APE + G +D ++ GV+
Sbjct: 151 EEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 512 LLELITG 518
L ++G
Sbjct: 209 LFICLSG 215
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 65 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 125 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 176
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 177 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 231 IMAELLTGR 239
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 345 IINGSTVAIKCMRRS-----ISKEVNLLKKINHFNLI---NLFGACEHDGVFYLVYEFME 396
II+ AI R + + E+ +LKK+NH +I N F A + +Y+V E ME
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED----YYIVLELME 97
Query: 397 NGSLSDW-LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D + KR E +++ L V YLH + G +H+D+ N+LL
Sbjct: 98 GGELFDKVVGNKRLKEATCKLYFYQMLLAV----QYLH---ENGIIHRDLKPENVLLSSQ 150
Query: 456 LRAKLANFS-FVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLV--TPEMDTYAFGVV 511
L + F S + E+ S +T GT Y+APE + G +D ++ GV+
Sbjct: 151 EEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 512 LLELITG 518
L ++G
Sbjct: 209 LFICLSG 215
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 42 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 102 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 153
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 154 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 208 IMAELLTGR 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 52 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 112 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 163
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 164 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 218 IMAELLTGR 226
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKR-----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
F+ L D++ P S+ + GL + H+ +H+D+
Sbjct: 83 FLHQ-DLKDFMDASALTGIPLPLIKSY------LFQLLQGLAFCHSHR---VLHRDLKPE 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 51 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 111 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 162
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 163 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 217 IMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 57 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 117 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 168
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 169 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 223 IMAELLTGR 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 357 RRSISKEVN-LLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R ++E+ LL+ H N+I L + Y+V E M+ G L D + +++ F S
Sbjct: 59 KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK---FFSE 115
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL-LDKNLRA---KLANFSFVRSAVR 471
+ + + YLH G VH+D+ NIL +D++ ++ +F F + +R
Sbjct: 116 REASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LR 171
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E+G T T ++APE +E D ++ GV+L ++TG
Sbjct: 172 AENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 43 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 103 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 154
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 155 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 209 IMAELLTGR 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 22 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 82 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 186
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 187 WSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 69 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 129 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 180
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 181 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 235 IMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 44 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 103
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 104 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 155
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +GY V T Y APE M + +D ++ G
Sbjct: 156 VNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 210 IMAELLTGR 218
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 24 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 83
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 84 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 133
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 188
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 189 WSLGCIFAEMVT-RRALFPGDSE 210
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 22 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 82 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 186
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 187 WSLGCIFAEMVT-RRALFPGDSE 208
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 109 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 160
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 161 NEDSELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 215 MAELLTGR 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDW---LHKKRYPEFVSWNCRF 419
E+ +L +H ++ L GA HDG +++ EF G++ L + + CR
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR- 116
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
+ L++LH+ +H+D+ +GN+L+ +LA+F + +
Sbjct: 117 ----QMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGV---SAKNLKTLQKR 166
Query: 480 KTAVGTNGYMAPEYM--EYGLVTP---EMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
+ +GT +MAPE + E TP + D ++ G+ L+E+ + ++ + +LL
Sbjct: 167 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-- 224
Query: 535 AVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
K++ P L K L +A + + PE+RPS A+++
Sbjct: 225 -------------KIAKSDPPTLLTPSKWSVEFRDFLKIA-LDKNPETRPSAAQLLE 267
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 30 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 89
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ + +F+ + I L + L L C +H+D+
Sbjct: 90 FLH----------QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 139
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 194
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 195 WSLGCIFAEMVT-RRALFPGDSE 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 297 KKRNLP-EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKC 355
KKR EDF + R L K+ ++ +A E S + +F+ + + V
Sbjct: 4 KKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--- 55
Query: 356 MRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHK------KRY 409
+ +EV + + H N++ L+G YL+ E+ G++ L K +R
Sbjct: 56 --HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 410 PEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSA 469
+++ ++A+ L Y C +H+DI N+LL K+A+F + A
Sbjct: 114 ATYIT---------ELANALSY---CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 470 VREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQ 525
S GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++
Sbjct: 162 PS-----SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 526 DGEEILLAEAVFSMVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
+ I E F A +S L+ +P+ + +E+ H
Sbjct: 217 TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ K+A+F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 113 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 164
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 165 NEDSELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 219 MAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 113 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 164
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +GY V T Y APE M + +D ++ G +
Sbjct: 165 NEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 219 MAELLTGR 226
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR-----YPEFVS 414
+ +E ++ + H +++ L DG+ Y+V+EFM+ L + K+ Y E V+
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVR 471
+ +I L L C D +H+D+ +LL + + KL F +
Sbjct: 135 SHYMRQI-------LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV--AIQL 185
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
ESG + VGT +MAPE ++ +D + GV+L L++G
Sbjct: 186 GESGLVAGGR-VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDW---LHKKRYPEFVSWNCRF 419
E+ +L +H ++ L GA HDG +++ EF G++ L + + CR
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR- 124
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
+ L++LH+ +H+D+ +GN+L+ +LA+F + +
Sbjct: 125 ----QMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGV---SAKNLKTLQKR 174
Query: 480 KTAVGTNGYMAPEYM--EYGLVTP---EMDTYAFGVVLLELITGKEAAYKQDGEEILLAE 534
+ +GT +MAPE + E TP + D ++ G+ L+E+ + ++ + +LL
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-- 232
Query: 535 AVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
K++ P L K L +A + + PE+RPS A+++
Sbjct: 233 -------------KIAKSDPPTLLTPSKWSVEFRDFLKIA-LDKNPETRPSAAQLLE 275
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 26 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 85
Query: 394 FMENGSLSDWLHKKR-----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
F+ + L D++ P S+ + GL + H+ +H+D+
Sbjct: 86 FL-SMDLKDFMDASALTGIPLPLIKSY------LFQLLQGLAFCHSHR---VLHRDLKPQ 135
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 190
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 191 WSLGCIFAEMVT-RRALFPGDSE 212
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 99 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 155
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 156 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+T T GT Y+APE + +D +A GV++ E+ G
Sbjct: 212 VK------GATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 23 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 82
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 83 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 129
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 130 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 182
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 229
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 230 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 257
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR-----YPEFVS 414
+ +E ++ + H +++ L DG+ Y+V+EFM+ L + K+ Y E V+
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 415 WNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSAVR 471
+ +I L L C D +H+D+ +LL + + KL F +
Sbjct: 133 SHYMRQI-------LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV--AIQL 183
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
ESG + VGT +MAPE ++ +D + GV+L L++G
Sbjct: 184 GESGLVAGGR-VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 25 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 84
Query: 394 FMENGSLSDWLHKKR-----YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
F+ + L D++ P S+ + GL + H+ +H+D+
Sbjct: 85 FL-SMDLKDFMDASALTGIPLPLIKSY------LFQLLQGLAFCHSHR---VLHRDLKPQ 134
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 189
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 190 WSLGCIFAEMVT-RRALFPGDSE 211
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ F R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILGFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 22 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 81
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 82 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 128
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 129 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 181
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 228
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 229 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 256
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 130 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 181
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E GY V T Y APE M + +D ++ G +
Sbjct: 182 NEDCELKILDFGLARHTDDEMXGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 236 MAELLTGR 243
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 8 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-----HQLRR 57
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
EV + + H N++ L+G YL+ E+ G++ L K +S R A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTA 111
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
+ + L C +H+DI N+LL K+A+F + A S
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRXXL 166
Query: 483 VGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEILLAEAVFS 538
GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I E F
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
Query: 539 MVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
A +S L+ +P+ + +E+ H
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +G+ V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFGLARHTDDEMAGF------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 18 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 77
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 78 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 124
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 125 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 177
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 224
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 225 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 252
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +G+ V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDFGLARHTDDEMAGF------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 55/206 (26%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCR- 418
I EV L+KK++H N+ L+ E + LV E G L D L+ + + + C
Sbjct: 75 IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNV--FIDDSTGKCAM 132
Query: 419 ------------------------FRIALDVAH--------------GLHYLHNCTDPGY 440
FR +LD LHYLHN G
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGI 189
Query: 441 VHKDISSGNILL--DKNLRAKLANFSFVRSAVREESG-YSSTKTAVGTNGYMAPEYM--- 494
H+DI N L +K+ KL +F + + +G Y T GT ++APE +
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249
Query: 495 --EYGLVTPEMDTYAFGVVLLELITG 518
YG P+ D ++ GV+L L+ G
Sbjct: 250 NESYG---PKCDAWSAGVLLHLLLMG 272
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 303 EDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSVFRGIINGSTVAIKCMRRSISK 362
EDF + R L K+ ++ +A E S + +F+ + + V + +
Sbjct: 11 EDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-----EHQLRR 60
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
EV + + H N++ L+G YL+ E+ G++ L K +S R A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTA 114
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
+ + L C +H+DI N+LL K+A+F + A S
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRDDL 169
Query: 483 VGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK---EA-AYKQDGEEILLAEAVFS 538
GT Y+ PE +E + ++D ++ GV+ E + GK EA Y++ + I E F
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
Query: 539 MVEGGNAEAKLSVLV--DPNLQANKKEIAHH 567
A +S L+ +P+ + +E+ H
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 37 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 96
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 97 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 143
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 144 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 196
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 243
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 244 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 271
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 50 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 109
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 110 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 156
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 157 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 209
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F +
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFRQRVSSECQ--- 264
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
HLI CLA P RP+ E+
Sbjct: 265 -----------------HLIRWCLAL---RPSDRPTFEEI 284
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 37 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 96
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 97 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 143
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 144 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 196
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F +
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFRQRVSSECQ--- 251
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
HLI CLA P RP+ E+
Sbjct: 252 -----------------HLIRWCLAL---RPSDRPTFEEI 271
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 26 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 85
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 86 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 190
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 191 WSLGCIFAEMVT-RRALFPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 25 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 84
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 85 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 134
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 189
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 190 WSLGCIFAEMVT-RRALFPGDSE 211
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 23 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 82
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 83 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 129
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 130 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 182
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 229
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 230 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKINHF--NLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 38 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 97
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 98 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 144
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 145 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 197
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 244
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 245 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 272
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 21 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 80
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 81 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 127
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 128 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 180
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 181 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 227
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 228 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 255
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 345 IINGSTVAIKCMRRS-----ISKEVNLLKKINHFNLI---NLFGACEHDGVFYLVYEFME 396
II+ AI R + + E+ +LKK+NH +I N F A + +Y+V E ME
Sbjct: 181 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED----YYIVLELME 236
Query: 397 NGSLSD-WLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D + KR E +++ L V YLH + G +H+D+ N+LL
Sbjct: 237 GGELFDKVVGNKRLKEATCKLYFYQMLLAV----QYLH---ENGIIHRDLKPENVLLSSQ 289
Query: 456 LRAKLANFS-FVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLV--TPEMDTYAFGVV 511
L + F S + E+ S +T GT Y+APE + G +D ++ GV+
Sbjct: 290 EEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 512 LLELITG 518
L ++G
Sbjct: 348 LFICLSG 354
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 103 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 154
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E +G+ V T Y APE M + +D ++ G +
Sbjct: 155 NEDCELKILDFGLARHTDDEMAGF------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 209 MAELLTGR 216
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 38 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 97
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 98 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 144
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 145 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 197
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 244
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 245 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 272
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 25 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 84
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 85 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 134
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 189
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 190 WSLGCIFAEMVT-RRALFPGDSE 211
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 29/230 (12%)
Query: 357 RRSISKEVN-LLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R S+E+ LL+ H N+I L + YLV E M G L D + ++++ F
Sbjct: 64 KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSER 121
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL-LDKNLRA---KLANFSFVRSAVR 471
F + + + YLH+ G VH+D+ NIL +D++ ++ +F F + +R
Sbjct: 122 EASF-VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LR 176
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA---AYKQDGE 528
E+G T T ++APE ++ D ++ G++L ++ G E
Sbjct: 177 AENGL--LMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
Query: 529 EIL--LAEAVFSMVEGGN-------AEAKLSVL--VDPNLQANKKEIAHH 567
EIL + F++ GGN A+ +S + VDP+ + K++ H
Sbjct: 235 EILTRIGSGKFTL-SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 22 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 82 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 186
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 187 WSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 345 IINGSTVAIKCMRRS-----ISKEVNLLKKINHFNLI---NLFGACEHDGVFYLVYEFME 396
II+ AI R + + E+ +LKK+NH +I N F A + +Y+V E ME
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED----YYIVLELME 222
Query: 397 NGSLSDW-LHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
G L D + KR E +++ L V YLH + G +H+D+ N+LL
Sbjct: 223 GGELFDKVVGNKRLKEATCKLYFYQMLLAV----QYLH---ENGIIHRDLKPENVLLSSQ 275
Query: 456 LRAKLANFS-FVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLV--TPEMDTYAFGVV 511
L + F S + E+ S +T GT Y+APE + G +D ++ GV+
Sbjct: 276 EEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 512 LLELITG 518
L ++G
Sbjct: 334 LFICLSG 340
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 65 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 124
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 125 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 171
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 172 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 224
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 271
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 272 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 299
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 22 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 82 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 186
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 187 WSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 24 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 83
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 84 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 133
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 188
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 189 WSLGCIFAEMVT-RRALFPGDSE 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+ + M G L H ++ F + RF A ++ GL ++HN V++D+ N
Sbjct: 268 FILDLMNGGDLH--YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPAN 321
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTK--TAVGTNGYMAPEYMEYGLV-TPEMDTY 506
ILLD++ ++++ +S K +VGT+GYMAPE ++ G+ D +
Sbjct: 322 ILLDEHGHVRISDLGLA-------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 374
Query: 507 AFGVVLLELITG 518
+ G +L +L+ G
Sbjct: 375 SLGCMLFKLLRG 386
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKINHF--NLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 57 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 163
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 164 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 216
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 217 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 263
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 264 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 291
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 23 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 82
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 83 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 129
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 130 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 182
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 229
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 230 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 257
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+ + M G L H ++ F + RF A ++ GL ++HN V++D+ N
Sbjct: 269 FILDLMNGGDLH--YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPAN 322
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTK--TAVGTNGYMAPEYMEYGLV-TPEMDTY 506
ILLD++ ++++ +S K +VGT+GYMAPE ++ G+ D +
Sbjct: 323 ILLDEHGHVRISDLGLA-------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 507 AFGVVLLELITG 518
+ G +L +L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 26 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 85
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ + +F+ + I L + L L C +H+D+
Sbjct: 86 FLH----------QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 190
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 191 WSLGCIFAEMVT-RRALFPGDSE 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+ + M G L H ++ F + RF A ++ GL ++HN V++D+ N
Sbjct: 269 FILDLMNGGDLH--YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPAN 322
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTK--TAVGTNGYMAPEYMEYGLV-TPEMDTY 506
ILLD++ ++++ +S K +VGT+GYMAPE ++ G+ D +
Sbjct: 323 ILLDEHGHVRISDLGLA-------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 507 AFGVVLLELITG 518
+ G +L +L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
+ + M G L H ++ F + RF A ++ GL ++HN V++D+ N
Sbjct: 269 FILDLMNGGDLH--YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPAN 322
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTK--TAVGTNGYMAPEYMEYGLV-TPEMDTY 506
ILLD++ ++++ +S K +VGT+GYMAPE ++ G+ D +
Sbjct: 323 ILLDEHGHVRISDLGLA-------CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 375
Query: 507 AFGVVLLELITG 518
+ G +L +L+ G
Sbjct: 376 SLGCMLFKLLRG 387
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 27 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 86
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ + +F+ + I L + L L C +H+D+
Sbjct: 87 FLH----------QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 136
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 137 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 191
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 192 WSLGCIFAEMVT-RRALFPGDSE 213
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 38 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 97
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 98 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 144
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 145 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 197
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 244
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 245 --------QRVSXE-CQHLIRWCLAL---RPXDRPTFEEI 272
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ + +F+ + I L + L L C +H+D+
Sbjct: 83 FLH----------QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 65 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 124
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 125 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 171
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 172 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 224
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 271
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 272 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 299
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 64 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 120
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 121 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 176
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T T GT Y+APE + +D +A GV++ E+ G
Sbjct: 177 VK------GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 375 LINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHN 434
+INL E+ L+ E+ G + L E VS N R+ + G++YLH
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 435 CTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS-STKTAVGTNGYMAPEY 493
VH D+ NILL L + V + + G++ + +GT Y+APE
Sbjct: 150 ---NNIVHLDLKPQNILLSSIY--PLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEI 204
Query: 494 MEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILL 532
+ Y +T D + G++ L+T +D +E L
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ ++ R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDYGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 59/244 (24%)
Query: 360 ISKEVNLLKKIN--HFNLINLFGACEHDGVFYLVYE-----------FMENGSLSDWLHK 406
+ EV LLKK++ +I L E F L+ E E G+L + L +
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 160
Query: 407 KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFV 466
+ W V + + HNC G +H+DI NIL+D N R +L F
Sbjct: 161 SFF-----WQ--------VLEAVRHCHNC---GVLHRDIKDENILIDLN-RGELKLIDFG 203
Query: 467 RSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQ 525
A+ +++ Y+ GT Y PE++ Y ++ G++L +++ G + ++
Sbjct: 204 SGALLKDTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEH 259
Query: 526 DGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPS 585
D EEI+ + F + HLI CLA P RP+
Sbjct: 260 D-EEIIRGQVFFRQRVSSECQ--------------------HLIRWCLAL---RPSDRPT 295
Query: 586 MAEV 589
E+
Sbjct: 296 FEEI 299
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 25 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 84
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 85 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPE 134
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 189
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 190 WSLGCIFAEMVT-RRALFPGDSE 211
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 38/243 (15%)
Query: 359 SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCR 418
S + +++ K++H +L+ +G C LV EF++ GSL +L K + + W +
Sbjct: 58 SFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--K 115
Query: 419 FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSS 478
+A +A +H+L T +H ++ + NILL + K N F++ + + G S
Sbjct: 116 LEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS---DPGISI 169
Query: 479 T---KTAVGTN-GYMAPEYME----YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
T K + ++ PE +E L T D ++FG L E+ +G G++
Sbjct: 170 TVLPKDILQERIPWVPPECIENPKNLNLAT---DKWSFGTTLWEICSG--------GDKP 218
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
L A +++ KL D + K A L L C+ EP+ RPS ++
Sbjct: 219 LSAL---------DSQRKLQFYEDRHQLPAPK--AAELANLINNCMDYEPDHRPSFRAII 267
Query: 591 STL 593
L
Sbjct: 268 RDL 270
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 362 KEVNLLKKINHFNLINLFG------ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+E+ LLK + H N+I L + E YLV M +D + + +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQKLTDD 137
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESG 475
+ +F I + GL Y+H+ +H+D+ N+ ++++ K+ +F R E +G
Sbjct: 138 HVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 476 YSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
Y V T Y APE M + +D ++ G ++ EL+TG+
Sbjct: 194 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW-NCRFRI 421
E+++L +H N++ L A ++ +++ EF G++ + + P S +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
LD L+YLH D +H+D+ +GNIL + KLA+F SA + +
Sbjct: 117 TLD---ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV--SAKNTRTXIQRRDS 168
Query: 482 AVGTNGYMAPEYM--EYGLVTP---EMDTYAFGVVLLEL 515
+GT +MAPE + E P + D ++ G+ L+E+
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 24 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 83
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ + +F+ + I L + L L C +H+D+
Sbjct: 84 FLH----------QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 133
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 188
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 189 WSLGCIFAEMVT-RRALFPGDSE 210
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 375 LINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHN 434
L+ L A + + +L+ +++ G L + H + F + + ++ L +LH
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVG-EIVLALEHLHK 177
Query: 435 CTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM 494
G +++DI NILLD N L +F + V +E+ GT YMAP+ +
Sbjct: 178 L---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--ERAYDFCGTIEYMAPDIV 232
Query: 495 EYGLVTPE--MDTYAFGVVLLELITGKEAAYKQDGEE 529
G + +D ++ GV++ EL+TG + + DGE+
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGA-SPFTVDGEK 268
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 29/230 (12%)
Query: 357 RRSISKEVN-LLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R S+E+ LL+ H N+I L + YLV E M G L D + ++++ F
Sbjct: 64 KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSER 121
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL-LDKNLRA---KLANFSFVRSAVR 471
F + + + YLH+ G VH+D+ NIL +D++ ++ +F F + +R
Sbjct: 122 EASF-VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LR 176
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEA---AYKQDGE 528
E+G T T ++APE ++ D ++ G++L ++ G E
Sbjct: 177 AENGL--LMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
Query: 529 EIL--LAEAVFSMVEGGN-------AEAKLSVL--VDPNLQANKKEIAHH 567
EIL + F++ GGN A+ +S + VDP+ + K++ H
Sbjct: 235 EILTRIGSGKFTL-SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 24 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 83
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 84 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPE 133
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 188
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 189 WSLGCIFAEMVT-RRALFPGDSE 210
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKINHF--NLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 70 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 129
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 130 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 176
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 177 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 229
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 230 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 276
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 277 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 304
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 51 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 110
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 111 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 157
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 158 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 210
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 257
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 258 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 285
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E V Y LV +++
Sbjct: 44 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 160
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 215
Query: 515 LITGK 519
L+ G+
Sbjct: 216 LLLGQ 220
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 51 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 110
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 111 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 157
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 158 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 210
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 257
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 258 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 18 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 77
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 78 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 124
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 125 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 177
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 224
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 225 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 252
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 45 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 104
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 105 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 151
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 152 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 204
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 205 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 251
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 252 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 279
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 38/243 (15%)
Query: 359 SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCR 418
S + +++ K++H +L+ +G C LV EF++ GSL +L K + + W +
Sbjct: 58 SFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--K 115
Query: 419 FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSS 478
+A +A +H+L T +H ++ + NILL + K N F++ + + G S
Sbjct: 116 LEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS---DPGISI 169
Query: 479 T---KTAVGTN-GYMAPEYME----YGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
T K + ++ PE +E L T D ++FG L E+ +G G++
Sbjct: 170 TVLPKDILQERIPWVPPECIENPKNLNLAT---DKWSFGTTLWEICSG--------GDKP 218
Query: 531 LLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
L A +++ KL D + K A L L C+ EP+ RPS ++
Sbjct: 219 LSAL---------DSQRKLQFYEDRHQLPAPK--AAELANLINNCMDYEPDHRPSFRAII 267
Query: 591 STL 593
L
Sbjct: 268 RDL 270
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 50 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 109
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 110 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 156
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 157 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 209
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 256
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 257 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 284
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 26 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 85
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ + F+ + I L + L L C +H+D+
Sbjct: 86 FLHQDLKT----------FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 135
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y V T Y APE + +Y + +D
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDI 190
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 191 WSLGCIFAEMVT-RRALFPGDSE 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA------CEHDGVFYLVY 392
G VA+K + R +E+ LLK +NH N+I+L E YLV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E M + +L +H + E +S+ + + G+ +LH+ G +H+D+ NI++
Sbjct: 109 ELM-DANLCQVIHMELDHERMSY-----LLYQMLCGIKHLHSA---GIIHRDLKPSNIVV 159
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
+ K+ +F R+A + + T V T Y APE + +D ++ G ++
Sbjct: 160 KSDCTLKILDFGLARTAC---TNFMMTPYVV-TRYYRAPEVILGMGYAANVDIWSVGCIM 215
Query: 513 LELITG 518
EL+ G
Sbjct: 216 GELVKG 221
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 50 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 109
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 110 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 156
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 157 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 209
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 256
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 257 --------QRVSSE-CQHLIRWCLAL---RPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 51 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 110
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 111 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 157
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 158 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 210
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 257
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 258 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 50 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 109
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 110 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 156
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 157 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 209
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 256
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 257 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 284
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
++ S + + + + +E+ + + H N++ ++ YL+ EF G L L
Sbjct: 47 VLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 106
Query: 405 HKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
K R+ E S ++A LHY C + +H+DI N+L+ K+A+F
Sbjct: 107 QKHGRFDEQRSAT----FMEELADALHY---CHERKVIHRDIKPENLLMGYKGELKIADF 159
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ A + GT Y+ PE +E ++D + GV+ E + G
Sbjct: 160 GWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
++ S + + + + +E+ + + H N++ ++ YL+ EF G L L
Sbjct: 46 VLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 105
Query: 405 HKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
K R+ E S ++A LHY C + +H+DI N+L+ K+A+F
Sbjct: 106 QKHGRFDEQRSAT----FMEELADALHY---CHERKVIHRDIKPENLLMGYKGELKIADF 158
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ A + GT Y+ PE +E ++D + GV+ E + G
Sbjct: 159 GWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 51 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 110
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W V +
Sbjct: 111 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQ--------VLEAVR 157
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ HNC G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 158 HCHNC---GVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 210
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIGGQVFFR----------- 257
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 258 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 285
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
++ S + + + + +E+ + + H N++ ++ YL+ EF G L L
Sbjct: 46 VLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 105
Query: 405 HKK-RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF 463
K R+ E S ++A LHY C + +H+DI N+L+ K+A+F
Sbjct: 106 QKHGRFDEQRSAT----FMEELADALHY---CHERKVIHRDIKPENLLMGYKGELKIADF 158
Query: 464 SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
+ A + GT Y+ PE +E ++D + GV+ E + G
Sbjct: 159 GWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 26 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 85
Query: 394 F--MENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
F M+ D P + + F++ GL + H+ +H+D+ N+L
Sbjct: 86 FLSMDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAFCHSHR---VLHRDLKPENLL 138
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDTYAF 508
++ KLA+F R+ Y V T Y APE + +Y + +D ++
Sbjct: 139 INTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDIWSL 193
Query: 509 GVVLLELITGKEAAYKQDGE 528
G + E++T + A + D E
Sbjct: 194 GCIFAEMVT-RRALFPGDSE 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +LS + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDATLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ GV++ E+I G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 24 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 83
Query: 394 F--MENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
F M+ D P + + F++ GL + H+ +H+D+ N+L
Sbjct: 84 FLSMDLKKFMDASALTGIPLPLIKSYLFQL----LQGLAFCHSHR---VLHRDLKPENLL 136
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDTYAF 508
++ KLA+F R+ Y V T Y APE + +Y + +D ++
Sbjct: 137 INTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTAVDIWSL 191
Query: 509 GVVLLELITGKEAAYKQDGE 528
G + E++T + A + D E
Sbjct: 192 GCIFAEMVT-RRALFPGDSE 210
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 394 FMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDISS 447
F E+ SLSD ++ Y E ++ + VA G+ +L C +H+D+++
Sbjct: 173 FQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKC-----IHRDLAA 227
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILL +N K+ +F R + T + +MAPE + + + + D ++
Sbjct: 228 RNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK-WMAPESIFDKIYSTKSDVWS 286
Query: 508 FGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAH- 566
+GV+L E+ + + Y + + E S + G ++ E +
Sbjct: 287 YGVLLWEIFSLGGSPYPG----VQMDEDFCSRLREG-------------MRMRAPEYSTP 329
Query: 567 HLIMLCLACIAREPESRPSMAEVVSTL 593
+ + L C R+P+ RP AE+V L
Sbjct: 330 EIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ +++ E+ +L I +H N++NL GAC + G ++ E+ + G+
Sbjct: 59 TVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGN 118
Query: 400 LSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAK 459
LS++L KR F + D A + +PG + G L +
Sbjct: 119 LSNYLKSKRD--------LFFLNKDAALHMEPKKEKMEPG-----LEQGK---KPRLDSV 162
Query: 460 LANFSFVRSAVREESGYSSTKTAVGTNG-YMAPEYMEYGLVTPEMDTYAFGVVL-LELIT 517
++ SF S +E+ S + ++G Y P ME ++ +Y+F V +E ++
Sbjct: 163 TSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITME------DLISYSFQVARGMEFLS 216
Query: 518 GKEAAYKQ-DGEEILLAE 534
++ ++ ILL+E
Sbjct: 217 SRKCIHRDLAARNILLSE 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA------CEHDGVFYLVY 392
G VA+K + R +E+ LLK +NH N+I+L E YLV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E M + +L +H + E +S+ + + G+ +LH+ G +H+D+ NI++
Sbjct: 107 ELM-DANLCQVIHMELDHERMSY-----LLYQMLCGIKHLHSA---GIIHRDLKPSNIVV 157
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVL 512
+ K+ +F R+A + + T V T Y APE + +D ++ G ++
Sbjct: 158 KSDCTLKILDFGLARTA---STNFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIM 213
Query: 513 LELITG 518
EL+ G
Sbjct: 214 GELVKG 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 30/184 (16%)
Query: 351 VAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVYEFM 395
VAIK + R +E+ L+K +NH N+I L + E Y+V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 396 ENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKN 455
+ +LS + + E +S+ + + G+ +LH+ G +H+D+ NI++ +
Sbjct: 112 -DANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSD 162
Query: 456 LRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLE 514
K+ +F R+A G S T V T Y APE + +D ++ GV++ E
Sbjct: 163 ATLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 515 LITG 518
+I G
Sbjct: 218 MIKG 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+ +R +E++LLK++NH N++ L + YLV+E
Sbjct: 23 RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 83 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 132
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 187
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 188 WSLGCIFAEMVT-RRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 343 RGIINGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+ +R +E++LLK++NH N++ L + YLV+E
Sbjct: 22 RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHG-----LHYLHNCTDPGYVHKDISSG 448
F+ +F+ + I L + L L C +H+D+
Sbjct: 82 FLHQD----------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ 131
Query: 449 NILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPEMDT 505
N+L++ KLA+F R+ Y+ V T Y APE + +Y + +D
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTAVDI 186
Query: 506 YAFGVVLLELITGKEAAYKQDGE 528
++ G + E++T + A + D E
Sbjct: 187 WSLGCIFAEMVT-RRALFPGDSE 208
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFAEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ +F R E +G V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTG------XVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 73 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRR 129
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 130 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 185
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 186 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 39/206 (18%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 22 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81
Query: 394 --------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDI 445
FM+ +L+ P S+ + GL + H+ +H+D+
Sbjct: 82 HVHQDLKTFMDASALTG----IPLPLIKSY------LFQLLQGLAFCHSHR---VLHRDL 128
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPE 502
N+L++ KLA+F R+ Y+ V T Y APE + +Y +
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKY--YSTA 183
Query: 503 MDTYAFGVVLLELITGKEAAYKQDGE 528
+D ++ G + E++T + A + D E
Sbjct: 184 VDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 354 KCMRRSISKEVNLLKKI-NHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEF 412
K M + KE+ LK H N++ L +LV E + G L + + KK++ F
Sbjct: 46 KRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--F 103
Query: 413 VSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL---DKNLRAKLANFSFVRSA 469
+ I + + ++H D G VH+D+ N+L + NL K+ +F F R
Sbjct: 104 SETEASY-IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159
Query: 470 VREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
+ KT T Y APE + D ++ GV+L +++G+
Sbjct: 160 PPDNQ---PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 71 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 127
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 128 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 183
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 184 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 99 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 155
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 156 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 212 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 74/280 (26%)
Query: 339 GSVFRGI--INGSTVAIKCMRRS-------------ISKEVNLLKKIN--HFNLINLFGA 381
GSV+ GI + VAIK + + + EV LLKK++ +I L
Sbjct: 18 GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 77
Query: 382 CEHDGVFYLVYE-----------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLH 430
E F L+ E E G+L + L + + W L
Sbjct: 78 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF-----WQV-----------LE 121
Query: 431 YLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMA 490
+ +C + G +H+DI NIL+D N R +L F A+ +++ Y+ GT Y
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDTVYTDFD---GTRVYSP 177
Query: 491 PEYMEYGLVTPE-MDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKL 549
PE++ Y ++ G++L +++ G + ++ D EEI+ + F
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHD-EEIIRGQVFFR----------- 224
Query: 550 SVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEV 589
Q E HLI CLA P RP+ E+
Sbjct: 225 --------QRVSXE-CQHLIRWCLAL---RPSDRPTFEEI 252
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 136 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+ G + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ K+ +F F +
Sbjct: 135 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 347 NGSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLV 391
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 392 YEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL 451
M +D + + + + +F I + GL Y+H+ +H+D+ N+
Sbjct: 106 THLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLA 157
Query: 452 LDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGV 510
++++ K+ + R E +GY V T Y APE M + +D ++ G
Sbjct: 158 VNEDCELKILDAGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 511 VLLELITGK 519
++ EL+TG+
Sbjct: 212 IMAELLTGR 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 127 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 178
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ +F R E G V T Y APE M + +D ++ G +
Sbjct: 179 NEDCELKILDFGLARHTDDEMXG------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 233 MAELLTGR 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
E+++L +H N++ L A ++ +++ EF G++ + + P ++ + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVC 141
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
L+YLH D +H+D+ +GNIL + KLA+F R +
Sbjct: 142 KQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR---XIQRRDSF 195
Query: 483 VGTNGYMAPEYM--EYGLVTP---EMDTYAFGVVLLEL 515
+GT +MAPE + E P + D ++ G+ L+E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
E+++L +H N++ L A ++ +++ EF G++ + + P ++ + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVC 141
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
L+YLH D +H+D+ +GNIL + KLA+F R +
Sbjct: 142 KQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR---TIQRRDSF 195
Query: 483 VGTNGYMAPEYM--EYGLVTP---EMDTYAFGVVLLEL 515
+GT +MAPE + E P + D ++ G+ L+E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 394 FMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDISS 447
F+E SLSD ++ Y +F++ + VA G+ +L C +H+D+++
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRDLAA 226
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILL + K+ +F R + ++ Y A +MAPE + + T + D ++
Sbjct: 227 RNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 285
Query: 508 FGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 286 FGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE------ 329
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 400 LSDWLHKKRYPEFVSWN---CRFRIALD 424
LS +L KR EFV + RFR D
Sbjct: 119 LSTYLRSKRN-EFVPYKTKGARFRQGKD 145
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 71 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 127
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 128 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 183
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 184 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E + + +N L+ L + + + Y+V E+ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ K+A+F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ + R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDRGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 54/283 (19%)
Query: 339 GSVFRGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFY 389
G V+ G +G VAI+ + ++ +EV ++ H N++ GAC
Sbjct: 47 GQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
++ + +L + + + N +IA ++ G+ YLH G +HKD+ S N
Sbjct: 106 IITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKN 160
Query: 450 ILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGY---MAPEYMEYGLVTPEM--- 503
+ D N + + +F + ++G K + NG+ +APE + ++P+
Sbjct: 161 VFYD-NGKVVITDFGLFSISGVLQAGRREDKLRI-QNGWLCHLAPEIIRQ--LSPDTEED 216
Query: 504 --------DTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDP 555
D +A G + EL +E +K AEA+ + G + P
Sbjct: 217 KLPFSKHSDVFALGTIWYEL-HAREWPFKTQP-----AEAIIWQMGTG---------MKP 261
Query: 556 NLQ--ANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKI 596
NL KEI+ + L C A E E RP+ +++ L K+
Sbjct: 262 NLSQIGMGKEISD----ILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ K+ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + H +R
Sbjct: 65 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRR 121
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 122 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKR 177
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 178 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 99 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRR 155
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 156 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 212 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ K+ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 394 FMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDISS 447
F+E SLSD ++ Y +F++ + VA G+ +L C +H+D+++
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRDLAA 228
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILL + K+ +F R + ++ Y A +MAPE + + T + D ++
Sbjct: 229 RNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 287
Query: 508 FGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 288 FGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE------ 331
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 400 LSDWLHKKRYPEFVSW---NCRFRIALD 424
LS +L KR EFV + RFR D
Sbjct: 121 LSTYLRSKRN-EFVPYKTKGARFRQGKD 147
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 348 GSTVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG------ACEHDGVFYLVY 392
G VA+K + R +E+ LLK + H N+I L + E YLV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
M +D + + + + +F I + GL Y+H+ +H+D+ N+ +
Sbjct: 107 HLMG----ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVV 511
+++ K+ + R E +GY V T Y APE M + +D ++ G +
Sbjct: 159 NEDCELKILDGGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 512 LLELITGK 519
+ EL+TG+
Sbjct: 213 MAELLTGR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 394 FMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDISS 447
F+E SLSD ++ Y +F++ + VA G+ +L C +H+D+++
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRDLAA 221
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILL + K+ +F R + ++ Y A +MAPE + + T + D ++
Sbjct: 222 RNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 280
Query: 508 FGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 281 FGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE------ 324
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 54 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 113
Query: 400 LSDWLHKKRYPEFVSW---NCRFRIALD 424
LS +L KR EFV + RFR D
Sbjct: 114 LSTYLRSKRN-EFVPYKTKGARFRQGKD 140
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 52 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 111
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 112 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 168
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 169 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 223
Query: 515 LITGK 519
L+ G+
Sbjct: 224 LLLGQ 228
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 394 FMENGSLSDWLHKKR----YPEFVSWNCRFRIALDVAHGLHYL--HNCTDPGYVHKDISS 447
F+E SLSD ++ Y +F++ + VA G+ +L C +H+D+++
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-----IHRDLAA 219
Query: 448 GNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYA 507
NILL + K+ +F R + ++ Y A +MAPE + + T + D ++
Sbjct: 220 RNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 278
Query: 508 FGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHH 567
FGV+L E+ + + Y G +I E + EG A P+ +
Sbjct: 279 FGVLLWEIFSLGASPYP--GVKI-DEEFCRRLKEGTRMRA-------PDYTTPE------ 322
Query: 568 LIMLCLACIAREPESRPSMAEVVSTL 593
+ L C EP RP+ +E+V L
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 350 TVAIKCMR--------RSISKEVNLLKKI-NHFNLINLFGAC-EHDGVFYLVYEFMENGS 399
TVA+K ++ R++ E+ +L I +H N++NL GAC + G ++ EF + G+
Sbjct: 52 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 111
Query: 400 LSDWLHKKRYPEFVSW---NCRFRIALD 424
LS +L KR EFV + RFR D
Sbjct: 112 LSTYLRSKRN-EFVPYKTKGARFRQGKD 138
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 357 RRSISKEVN-LLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSW 415
+R ++E+ LL+ H N+I L + Y+V E + G L D + +++ F S
Sbjct: 59 KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK---FFSE 115
Query: 416 NCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNIL-LDKNLRA---KLANFSFVRSAVR 471
+ + + YLH G VH+D+ NIL +D++ ++ +F F + +R
Sbjct: 116 REASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LR 171
Query: 472 EESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
E+G T T ++APE +E D ++ GV+L +TG
Sbjct: 172 AENGL--LXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 63 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 122
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 123 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 179
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 180 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 234
Query: 515 LITGK 519
L+ G+
Sbjct: 235 LLLGQ 239
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 39/206 (18%)
Query: 343 RGIINGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYE 393
R + G VA+K +R + +E++LLK++NH N++ L + YLV+E
Sbjct: 26 RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 85
Query: 394 --------FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDI 445
FM+ +L+ P S+ + GL + H+ +H+D+
Sbjct: 86 HVDQDLKKFMDASALTG----IPLPLIKSY------LFQLLQGLAFCHSHR---VLHRDL 132
Query: 446 SSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EYGLVTPE 502
N+L++ KLA+F R+ Y V T Y APE + +Y +
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRTYXH---EVVTLWYRAPEILLGCKY--YSTA 187
Query: 503 MDTYAFGVVLLELITGKEAAYKQDGE 528
+D ++ G + E++T + A + D E
Sbjct: 188 VDIWSLGCIFAEMVT-RRALFPGDSE 212
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 78 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 194
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 195 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 249
Query: 515 LITGK 519
L+ G+
Sbjct: 250 LLLGQ 254
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 56 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 116 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 172
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 173 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 227
Query: 515 LITGK 519
L+ G+
Sbjct: 228 LLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 56 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 116 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 172
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 173 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 227
Query: 515 LITGK 519
L+ G+
Sbjct: 228 LLLGQ 232
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 339 GSVFRGIINGSTVAIKCMRR------------SISKEVNLLKKINHFNLINLFGACEHDG 386
G+VF+ N T I ++R S +E+ LLK++ H N++ L D
Sbjct: 16 GTVFKAK-NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK 74
Query: 387 VFYLVYEFMENG--SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
LV+EF + D + PE V + GL + H+ +H+D
Sbjct: 75 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-----SFLFQLLKGLGFCHS---RNVLHRD 126
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYG--LVTPE 502
+ N+L+++N KLANF R+ YS+ V T Y P+ + +G L +
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIPVRCYSA---EVVTLWYRPPDVL-FGAKLYSTS 182
Query: 503 MDTYAFGVVLLEL 515
+D ++ G + EL
Sbjct: 183 IDMWSAGCIFAEL 195
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 363 EVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
E+++L +H N++ L A ++ +++ EF G++ + + P ++ + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVC 141
Query: 423 LDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA 482
L+YLH D +H+D+ +GNIL + KLA+F R
Sbjct: 142 KQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR---XIQRRDXF 195
Query: 483 VGTNGYMAPEYM--EYGLVTP---EMDTYAFGVVLLEL 515
+GT +MAPE + E P + D ++ G+ L+E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 45 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 104
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 105 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 161
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 162 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 216
Query: 515 LITGK 519
L+ G+
Sbjct: 217 LLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 44 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 160
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 215
Query: 515 LITGK 519
L+ G+
Sbjct: 216 LLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 44 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 160
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 215
Query: 515 LITGK 519
L+ G+
Sbjct: 216 LLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 72 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 131
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 132 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 188
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 189 VLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 243
Query: 515 LITGK 519
L+ G+
Sbjct: 244 LLLGQ 248
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 48 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 107
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 108 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 164
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 165 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 219
Query: 515 LITGK 519
L+ G+
Sbjct: 220 LLLGQ 224
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ ++ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 57 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 116
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 117 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 173
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 174 VLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 228
Query: 515 LITGK 519
L+ G+
Sbjct: 229 LLLGQ 233
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 78 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 194
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 195 VLKLCDFGSAKQLVRGEPNVS----YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 249
Query: 515 LITGK 519
L+ G+
Sbjct: 250 LLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 80 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 139
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 140 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 196
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 197 VLKLCDFGSAKQLVRGEPNVS----YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 251
Query: 515 LITGK 519
L+ G+
Sbjct: 252 LLLGQ 256
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +LS + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDATLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 82 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 141
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 142 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 198
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 199 VLKLCDFGSAKQLVRGEPNVS----YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 253
Query: 515 LITGK 519
L+ G+
Sbjct: 254 LLLGQ 258
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 345 IINGSTVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
++ S + + + + +E+ + ++H N++ L+ YL+ E+ G L L
Sbjct: 55 VLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114
Query: 405 HKKRYPEFVSWNCRF------RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRA 458
K +C F I ++A L Y C +H+DI N+LL
Sbjct: 115 QK---------SCTFDEQRTATIMEELADALMY---CHGKKVIHRDIKPENLLLGLKGEL 162
Query: 459 KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
K+A+F + +V S KT GT Y+ PE +E + ++D + GV+ EL+ G
Sbjct: 163 KIADFGW---SVHAPS--LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 49 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 108
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 109 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 165
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 166 VLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 220
Query: 515 LITGK 519
L+ G+
Sbjct: 221 LLLGQ 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L L + + + Y+V E+ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ K+ +F F +
Sbjct: 136 IGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +LS + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDATLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 140/342 (40%), Gaps = 71/342 (20%)
Query: 282 KRRRDEAARKDGKREKKRNLPEDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSV 341
KR+R K G++ + N+P +F S+ NL V +E V
Sbjct: 5 KRKRGSRGGKKGRKSRIANIP-NFEQSLKNL-------------VVSEKILGYGSSGTVV 50
Query: 342 FRGIINGSTVAIKCMRRSISK----EVNLL-KKINHFNLINLFGACEHDGVFYLVYEFME 396
F+G G VA+K M E+ LL + +H N+I + + D Y+ E
Sbjct: 51 FQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC- 109
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFR-----IAL--DVAHGLHYLHNCTDPGYVHKDISSGN 449
N +L D + K + N + + I+L +A G+ +LH+ +H+D+ N
Sbjct: 110 NLNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQN 163
Query: 450 ILLD-------------KNLRAKLANFSFVRSAVREESGYSSTKTAV----GTNGYMAPE 492
IL+ +NLR +++F + +SG + + GT+G+ APE
Sbjct: 164 ILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 493 YMEYGL---VTPEMDTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGGNAEAK 548
+E +T +D ++ G V +++ GK + E + +FS+ E
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE------- 273
Query: 549 LSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ L D +L A ++ + I +P RP+ +V+
Sbjct: 274 MKCLHDRSLIAEATDLISQM-------IDHDPLKRPTAMKVL 308
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 123 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 182
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 183 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 239
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 240 VLKLCDFGSAKQLVRGEPNVS----YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 294
Query: 515 LITGK 519
L+ G+
Sbjct: 295 LLLGQ 299
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCM---RRSISKEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + +R ++E+ +++K++H N++ L + + E Y LV +++
Sbjct: 44 SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 160
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 215
Query: 515 LITGK 519
L+ G+
Sbjct: 216 LLLGQ 220
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 140/342 (40%), Gaps = 71/342 (20%)
Query: 282 KRRRDEAARKDGKREKKRNLPEDFLVSVSNLDRGLKFYKYEDLVVATENFSPKNMIDGSV 341
KR+R K G++ + N+P +F S+ NL V +E V
Sbjct: 5 KRKRGSRGGKKGRKSRIANIP-NFEQSLKNL-------------VVSEKILGYGSSGTVV 50
Query: 342 FRGIINGSTVAIKCMRRSISK----EVNLL-KKINHFNLINLFGACEHDGVFYLVYEFME 396
F+G G VA+K M E+ LL + +H N+I + + D Y+ E
Sbjct: 51 FQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC- 109
Query: 397 NGSLSDWLHKKRYPEFVSWNCRFR-----IAL--DVAHGLHYLHNCTDPGYVHKDISSGN 449
N +L D + K + N + + I+L +A G+ +LH+ +H+D+ N
Sbjct: 110 NLNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQN 163
Query: 450 ILLD-------------KNLRAKLANFSFVRSAVREESGYSSTKTAV----GTNGYMAPE 492
IL+ +NLR +++F + +SG + + GT+G+ APE
Sbjct: 164 ILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 493 YMEYGL---VTPEMDTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGGNAEAK 548
+E +T +D ++ G V +++ GK + E + +FS+ E
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE------- 273
Query: 549 LSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ L D +L A ++ + I +P RP+ +V+
Sbjct: 274 MKCLHDRSLIAEATDLISQM-------IDHDPLKRPTAMKVL 308
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +LS + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L L + + + Y+V E+ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ K+ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L L + + + Y+V E+ G + + H +R
Sbjct: 79 KVVKLKQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 135
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ K+ +F F +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 192 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 123/287 (42%), Gaps = 61/287 (21%)
Query: 341 VFRGIINGSTVAIKCMRRSISK----EVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFM 395
VF+G G VA+K M E+ LL + + H N+I + + D Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 396 ENGSLSDWLHKKRYPEFVSWNCRFR-----IAL--DVAHGLHYLHNCTDPGYVHKDISSG 448
N +L D + K + N + + I+L +A G+ +LH+ +H+D+
Sbjct: 92 -NLNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQ 144
Query: 449 NILLD-------------KNLRAKLANFSFVRSAVREESGYSSTKTAV----GTNGYMAP 491
NIL+ +NLR +++F + + +SG SS +T + GT+G+ AP
Sbjct: 145 NILVSTSSRFTADQQTGAENLRILISDFGLCK---KLDSGQSSFRTNLNNPSGTSGWRAP 201
Query: 492 EYMEYG-------LVTPEMDTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGG 543
E +E +T +D ++ G V +++ GK + E + +FS+ E
Sbjct: 202 ELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE-- 259
Query: 544 NAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ L D +L A ++ + I +P RP+ +V+
Sbjct: 260 -----MKCLHDRSLIAEATDLISQM-------IDHDPLKRPTAMKVL 294
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +LS + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDATLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 339 GSVFRGIINGSTVAIKCMRR------------SISKEVNLLKKINHFNLINLFGACEHDG 386
G+VF+ N T I ++R S +E+ LLK++ H N++ L D
Sbjct: 16 GTVFKAK-NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK 74
Query: 387 VFYLVYEFMENG--SLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKD 444
LV+EF + D + PE V + GL + H+ +H+D
Sbjct: 75 KLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-----SFLFQLLKGLGFCHS---RNVLHRD 126
Query: 445 ISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYG--LVTPE 502
+ N+L+++N KLA+F R+ YS+ V T Y P+ + +G L +
Sbjct: 127 LKPQNLLINRNGELKLADFGLARAFGIPVRCYSA---EVVTLWYRPPDVL-FGAKLYSTS 182
Query: 503 MDTYAFGVVLLEL 515
+D ++ G + EL
Sbjct: 183 IDMWSAGCIFAEL 195
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF 92
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDXTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+AP + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 339 GSVF--RGIINGST-VAIKCMR---------RSISKEVNLLKKINHF---NLINLFGAC- 382
G VF R + NG VA+K +R S +EV +L+ + F N++ LF C
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 383 ----EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDP 438
+ + LV+E ++ L+ +L K P + + + + GL +LH+
Sbjct: 85 VSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFLHSHR-- 140
Query: 439 GYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGL 498
VH+D+ NIL+ + + KLA+F R S + + V T Y APE +
Sbjct: 141 -VVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 499 VTPEMDTYAFGVVLLELITGK 519
+D ++ G + E+ K
Sbjct: 196 YATPVDLWSVGCIFAEMFRRK 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 343 RGIINGSTVAIKCM----------RRSISKEVNLLKKINHFNLI---NLFGACEHDGVF- 388
R + G VAIK + +R++ +E+ +LK H N+I ++ G F
Sbjct: 75 RRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDNIIAIKDILRPTVPYGEFK 133
Query: 389 --YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
Y+V + ME+ L +H + + R+ + + GL Y+H+ +H+D+
Sbjct: 134 SVYVVLDLMES-DLHQIIHSSQ--PLTLEHVRYFL-YQLLRGLKYMHSAQ---VIHRDLK 186
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYM----EYGLVTP 501
N+L+++N K+ +F R + + T V T Y APE M EY T
Sbjct: 187 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY---TQ 243
Query: 502 EMDTYAFGVVLLELITGKE 520
+D ++ G + E++ ++
Sbjct: 244 AIDLWSVGCIFGEMLARRQ 262
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 23/207 (11%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGV-----FYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +LK H N+I +F D Y++ E M+ LH+ + +S +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDD 112
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVR----SAV-- 470
+ LH +H+D+ N+L++ N K+ +F R SA
Sbjct: 113 HIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 471 REESGYSSTKT-AVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGE 528
E +G S T V T Y APE M + MD ++ G +L EL + +D
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 529 EILLAEAVFSMVEGGNAEAKLSVLVDP 555
LL +F ++ +++ L + P
Sbjct: 230 HQLL--LIFGIIGTPHSDNDLRCIESP 254
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 23/207 (11%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGV-----FYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +LK H N+I +F D Y++ E M+ LH+ + +S +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDD 112
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVR----SAV-- 470
+ LH +H+D+ N+L++ N K+ +F R SA
Sbjct: 113 HIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 471 REESGYSSTKTA-VGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGE 528
E +G S T V T Y APE M + MD ++ G +L EL + +D
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 529 EILLAEAVFSMVEGGNAEAKLSVLVDP 555
LL +F ++ +++ L + P
Sbjct: 230 HQLL--LIFGIIGTPHSDNDLRCIESP 254
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 25/188 (13%)
Query: 324 LVVATENFSPKNMI----DGS-VFRGIINGSTVAIK-----CMRRSISKEVNLLKKIN-H 372
++V +F PK+++ +G+ V+RG+ + VA+K C + +EV LL++ + H
Sbjct: 19 VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA-DREVQLLRESDEH 77
Query: 373 FNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCR-FRIALDVAHGLHY 431
N+I F E D F + + +L +++ +K +F + GL +
Sbjct: 78 PNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAH 133
Query: 432 LHNCTDPGYVHKDISSGNILLD-----KNLRAKLANFSFVRSAVREESGYSSTKTAVGTN 486
LH+ VH+D+ NIL+ ++A +++F + +S GT
Sbjct: 134 LHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 487 GYMAPEYM 494
G++APE +
Sbjct: 191 GWIAPEML 198
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 339 GSVF--RGIINGST-VAIKCMR---------RSISKEVNLLKKINHF---NLINLFGAC- 382
G VF R + NG VA+K +R S +EV +L+ + F N++ LF C
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 383 ----EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDP 438
+ + LV+E ++ L+ +L K P + + + + GL +LH+
Sbjct: 85 VSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFLHSHR-- 140
Query: 439 GYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGL 498
VH+D+ NIL+ + + KLA+F R S + + V T Y APE +
Sbjct: 141 -VVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 499 VTPEMDTYAFGVVLLELITGK 519
+D ++ G + E+ K
Sbjct: 196 YATPVDLWSVGCIFAEMFRRK 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 343 RGIINGSTVAIKCM----------RRSISKEVNLLKKINHFNLI---NLFGACEHDGVF- 388
R + G VAIK + +R++ +E+ +LK H N+I ++ G F
Sbjct: 74 RRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDNIIAIKDILRPTVPYGEFK 132
Query: 389 --YLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
Y+V + ME+ L +H + + R+ + + GL Y+H+ +H+D+
Sbjct: 133 SVYVVLDLMES-DLHQIIHSSQ--PLTLEHVRYFL-YQLLRGLKYMHSAQ---VIHRDLK 185
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYM----EYGLVTP 501
N+L+++N K+ +F R + + T V T Y APE M EY T
Sbjct: 186 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEY---TQ 242
Query: 502 EMDTYAFGVVLLELITGKE 520
+D ++ G + E++ ++
Sbjct: 243 AIDLWSVGCIFGEMLARRQ 261
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 339 GSVF--RGIINGST-VAIKCMR---------RSISKEVNLLKKINHF---NLINLFGAC- 382
G VF R + NG VA+K +R S +EV +L+ + F N++ LF C
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 383 ----EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDP 438
+ + LV+E ++ L+ +L K P + + + + GL +LH+
Sbjct: 85 VSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFLHSHR-- 140
Query: 439 GYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGL 498
VH+D+ NIL+ + + KLA+F R S + + V T Y APE +
Sbjct: 141 -VVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 499 VTPEMDTYAFGVVLLELITGK 519
+D ++ G + E+ K
Sbjct: 196 YATPVDLWSVGCIFAEMFRRK 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 31/176 (17%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFY--LVYEFMENGSLSDWLHKKR----YPEFVSW 415
+E +LKK+NH N++ LF E + L+ EF GSL L + PE
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE---- 111
Query: 416 NCRFRIAL-DVAHGLHYLHNCTDPGYVHKDISSGNILL----DKNLRAKLANFSFVRSAV 470
F I L DV G+++L + G VH++I GNI+ D KL +F A
Sbjct: 112 -SEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF----GAA 163
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE--------MDTYAFGVVLLELITG 518
RE + GT Y+ P+ E ++ + +D ++ GV TG
Sbjct: 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 50/283 (17%)
Query: 341 VFRGIINGSTVAIKCM-------RRSISKEVNLLKKINHFNLINLFGAC------EHDGV 387
+ G+ +G A+K + R +E ++ + NH N++ L C +H+
Sbjct: 47 LVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA- 105
Query: 388 FYLVYEFMENGSLSDWLHK-KRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDIS 446
+L+ F + G+L + + + K F++ + + L + GL +H GY H+D+
Sbjct: 106 -WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLK 161
Query: 447 SGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVG------TNGYMAPEYM---EYG 497
NILL + L + + A G T T Y APE +
Sbjct: 162 PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC 221
Query: 498 LVTPEMDTYAFGVVLLELITGKEAAYK---QDGEEILLAEAVFSMVEGGNAEAKLSVLVD 554
++ D ++ G VL ++ G E Y Q G+ + LA + +LS+
Sbjct: 222 VIDERTDVWSLGCVLYAMMFG-EGPYDMVFQKGDSVALA-----------VQNQLSIPQS 269
Query: 555 PNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVSTLMKIQ 597
P + L L + + +P RP + ++S L +Q
Sbjct: 270 PRHSSA-------LWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 34/218 (15%)
Query: 326 VATENFSPKNMID----GSVF--RGIINGSTVAIKCMRR---------SISKEVNLLKKI 370
+AT + P I G+V+ R +G VA+K +R S +EV LL+++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 371 NHF---NLINLFGAC-----EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
F N++ L C + + LV+E ++ L +L K P + + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLM 118
Query: 423 LDVAHGLHYLH-NCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
GL +LH NC VH+D+ NIL+ KLA+F R S +
Sbjct: 119 RQFLRGLDFLHANCI----VHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALDP 170
Query: 482 AVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE + +D ++ G + E+ K
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+ G + + H +R
Sbjct: 78 KVVKLKEIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ K+ +F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 34/218 (15%)
Query: 326 VATENFSPKNMID----GSVF--RGIINGSTVAIKCMRR---------SISKEVNLLKKI 370
+AT + P I G+V+ R +G VA+K +R S +EV LL+++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 371 NHF---NLINLFGAC-----EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
F N++ L C + + LV+E ++ L +L K P + + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLM 118
Query: 423 LDVAHGLHYLH-NCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
GL +LH NC VH+D+ NIL+ KLA+F R S +
Sbjct: 119 RQFLRGLDFLHANCI----VHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALAP 170
Query: 482 AVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE + +D ++ G + E+ K
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPEVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E++ G + + H +R
Sbjct: 78 KVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+L+D+ ++ +F F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT +APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 357 RRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+ ++ E++++ +++H LINL A E L+ EF+ G L D + + Y +S
Sbjct: 92 KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK--MSEA 149
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD--KNLRAKLANFSFVRSAVREES 474
GL ++H + VH DI NI+ + K K+ +F +E
Sbjct: 150 EVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205
Query: 475 GYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEIL 531
K T + APE ++ V D +A GV+ L++G +D E L
Sbjct: 206 ---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 34 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 93
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 94 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 146
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 147 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 199
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 92
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDXTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 129 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 186 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 129
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 130 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 187 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 326 VATENFSPKNMID----GSVF--RGIINGSTVAIKCMRR---------SISKEVNLLKKI 370
+AT + P I G+V+ R +G VA+K +R S +EV LL+++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 371 NHF---NLINLFGAC-----EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIA 422
F N++ L C + + LV+E ++ L +L K P + + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK-DLM 118
Query: 423 LDVAHGLHYLH-NCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
GL +LH NC VH+D+ NIL+ KLA+F R + + +
Sbjct: 119 RQFLRGLDFLHANCI----VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP---- 170
Query: 482 AVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE + +D ++ G + E+ K
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCMRRSIS---KEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + + + +E+ +++K++H N++ L + + E Y LV +++
Sbjct: 44 SGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 160
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSX----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 215
Query: 515 LITGK 519
L+ G+
Sbjct: 216 LLLGQ 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 85
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 86 TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSA- 138
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 139 --GIIHRDLKPSNIVVKSDXTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 191
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 46 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 104 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNL 155
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 156 LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 25/208 (12%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGV-----FYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +LK H N+I +F D Y++ E M+ LH+ + +S +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDD 112
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ LH +H+D+ N+L++ N K+ +F R + E +
Sbjct: 113 HIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAAD 168
Query: 477 SSTKTA--------VGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDG 527
+S T V T Y APE M + MD ++ G +L EL + +D
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 528 EEILLAEAVFSMVEGGNAEAKLSVLVDP 555
LL +F ++ +++ L + P
Sbjct: 229 RHQLL--LIFGIIGTPHSDNDLRCIESP 254
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF 92
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDXTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 46 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 104 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNL 155
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 156 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 46 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 104 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNL 155
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 156 LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFY--LVYEFMENGSLSDWLHKKR----YPEFVSW 415
+E +LKK+NH N++ LF E + L+ EF GSL L + PE
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE---- 111
Query: 416 NCRFRIAL-DVAHGLHYLHNCTDPGYVHKDISSGNILL----DKNLRAKLANFSFVRSAV 470
F I L DV G+++L + G VH++I GNI+ D KL +F A
Sbjct: 112 -SEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF----GAA 163
Query: 471 REESGYSSTKTAVGTNGYMAPEYMEYGLVTPE--------MDTYAFGVVLLELITG 518
RE GT Y+ P+ E ++ + +D ++ GV TG
Sbjct: 164 RELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 46 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 104 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNL 155
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 156 LLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCMRRSIS---KEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + + + +E+ +++K++H N++ L + + E Y LV +++
Sbjct: 44 SGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 160
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 215
Query: 515 LITGK 519
L+ G+
Sbjct: 216 LLLGQ 220
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 54 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 111
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 112 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 163
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 164 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 223
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 224 CILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 46 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 104 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 155
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 156 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 216 CILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 48 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 106 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 157
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 158 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 218 CILAEMLSNR 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 347 NGSTVAIKCMRRSIS---KEVNLLKKINHFNLINL----FGACEHDGVFY--LVYEFMEN 397
+G VAIK + + + +E+ +++K++H N++ L + + E Y LV +++
Sbjct: 44 SGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 398 GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLR 457
H R + + + L Y+H+ G H+DI N+LLD +
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 160
Query: 458 A-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDTYAFGVVLLE 514
KL +F + VR E S + + Y APE + +G T +D ++ G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSY----ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAE 215
Query: 515 LITGK 519
L+ G+
Sbjct: 216 LLLGQ 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 47/265 (17%)
Query: 347 NGSTVAIKCMRRSISKEVN---------LLKKINHFNLINLFGACEHDGVFYLVYEFMEN 397
+G +A+K +R ++ ++ +++ + ++ +GA +G ++ E M
Sbjct: 46 SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105
Query: 398 GSLSDWLHKKRYP---EFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK 454
D +K Y + + +I L L++L + +H+DI NILLD+
Sbjct: 106 SF--DKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDR 161
Query: 455 NLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYME-------YGLVTPEMDTYA 507
+ KL +F V + T+ A G YMAPE ++ Y + + D ++
Sbjct: 162 SGNIKLCDFGISGQLV---DSIAKTRDA-GCRPYMAPERIDPSASRQGYDVRS---DVWS 214
Query: 508 FGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQAN--KKEIA 565
G+ L EL TG+ K + + + + +V+G DP +N ++E +
Sbjct: 215 LGITLYELATGRFPYPKWNS----VFDQLTQVVKG-----------DPPQLSNSEEREFS 259
Query: 566 HHLIMLCLACIAREPESRPSMAEVV 590
I C+ ++ RP E++
Sbjct: 260 PSFINFVNLCLTKDESKRPKYKELL 284
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 62/276 (22%)
Query: 339 GSVFRG--IINGSTVAIKCMRR-------------SISKEVNLLKKIN----HFNLINLF 379
G+VF G + + VAIK + R + EV LL K+ H +I L
Sbjct: 45 GTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104
Query: 380 GACEHDGVFYLVYEF-MENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDP 438
E F LV E + L D++ +K C F + + +C
Sbjct: 105 DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF------GQVVAAIQHCHSR 158
Query: 439 GYVHKDISSGNILLD-KNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM--- 494
G VH+DI NIL+D + AKL +F A+ + Y+ GT Y PE++
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHDEPYTDFD---GTRVYSPPEWISRH 213
Query: 495 EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVD 554
+Y + ++ G++L +++ G + +++D +EIL AE F V
Sbjct: 214 QYHALP--ATVWSLGILLYDMVCG-DIPFERD-QEILEAELHF------------PAHVS 257
Query: 555 PNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
P+ A L C+A +P SRPS+ E++
Sbjct: 258 PDCCA-----------LIRRCLAPKPSSRPSLEEIL 282
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L + H N+I + E Y+
Sbjct: 66 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 123
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 124 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 175
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 176 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 236 CILAEMLSNR 245
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVF 92
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDXTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+ E+++ K NH N++ D ++V FM GS D + F+
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT----HFMDGMNEL 112
Query: 420 RIAL---DVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKL----ANFSFVRSAVRE 472
IA V L Y+H+ GYVH+ + + +IL+ + + L +N S + R+
Sbjct: 113 AIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 169
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGL--VTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
+ K +V +++PE ++ L + D Y+ G+ EL G ++
Sbjct: 170 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 229
Query: 531 LL 532
LL
Sbjct: 230 LL 231
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 129 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 129 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 122
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 123 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 326 VATENFSPKNMID----GSVF--RGIINGSTVAIKCMRR------------SISKEVNLL 367
+AT + P I G+V+ R +G VA+K +R S +EV LL
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 368 KKINHF---NLINLFGAC-----EHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+++ F N++ L C + + LV+E ++ L +L K P + +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK- 123
Query: 420 RIALDVAHGLHYLH-NCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSS 478
+ GL +LH NC VH+D+ NIL+ KLA+F R S +
Sbjct: 124 DLMRQFLRGLDFLHANCI----VHRDLKPENILVTSGGTVKLADFGLARIY----SYQMA 175
Query: 479 TKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE + +D ++ G + E+ K
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 129 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 71 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 130
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 131 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 183
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 184 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 236
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 129
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 130 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 187 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 122
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 123 HICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
+ E+++ K NH N++ D ++V FM GS D + F+
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT----HFMDGMNEL 128
Query: 420 RIAL---DVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKL----ANFSFVRSAVRE 472
IA V L Y+H+ GYVH+ + + +IL+ + + L +N S + R+
Sbjct: 129 AIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 185
Query: 473 ESGYSSTKTAVGTNGYMAPEYMEYGL--VTPEMDTYAFGVVLLELITGKEAAYKQDGEEI 530
+ K +V +++PE ++ L + D Y+ G+ EL G ++
Sbjct: 186 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 245
Query: 531 LL 532
LL
Sbjct: 246 LL 247
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 76 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 130
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 131 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 188 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 67 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 121
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 122 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 179 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSND 128
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 129 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 360 ISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRF 419
++ E+ +L ++ H N+I + E+ G F LV E +G L + R+P +
Sbjct: 76 VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASY 134
Query: 420 RIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSST 479
I + + YL +H+DI NI++ ++ KL +F SA E G
Sbjct: 135 -IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFG---SAAYLERG-KLF 186
Query: 480 KTAVGTNGYMAPE-YMEYGLVTPEMDTYAFGVVLLELI 516
T GT Y APE M PE++ ++ GV L L+
Sbjct: 187 YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 349 STVAIKCMRRSISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKR 408
V +K + +++ E +L+ +N L+ L + + + Y+V E+ G + + H +R
Sbjct: 78 KVVKLKEIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRR 134
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRS 468
F + RF A + YLH+ +++D+ N+++D+ ++ +F +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKR 190
Query: 469 AVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITG 518
T GT Y+APE + +D +A GV++ E+ G
Sbjct: 191 VK------GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 30/180 (16%)
Query: 362 KEVNLLKKIN-HFNLINLFGA--CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCR 418
+E+ +L +++ H N++NL ++D YLV+++ME LH + +
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHK 111
Query: 419 FRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSS 478
+ + + YLH+ G +H+D+ NILL+ K+A+F RS V ++
Sbjct: 112 QYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNN 168
Query: 479 TKTA------------------VGTNGYMAPEYMEYGL-VTPEMDTYAFGVVLLELITGK 519
+ V T Y APE + T +D ++ G +L E++ GK
Sbjct: 169 IPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 34 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 93
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 94 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 146
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 147 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 199
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 32 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 91
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 92 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 144
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 145 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 197
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 198 GMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 92
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 92
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 27 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 86
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 87 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 139
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 140 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 192
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 27 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 86
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 87 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 139
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 140 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 192
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 85
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 86 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 138
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 139 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 191
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLINL-----FGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I + E Y+V + ME L+K + +S +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKCQHLSND 128
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A +
Sbjct: 129 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 34 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 93
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 94 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 146
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 147 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 199
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 362 KEVNLLKKINHFNLI---NLFGACEHDGV--FYLVYEFMENGSLSDWLHKKRYPEFVSWN 416
+E+ +L + H N+I ++ A + + Y+V + ME L+K + +S +
Sbjct: 90 REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETD-----LYKLLKSQQLSND 144
Query: 417 CRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGY 476
+ GL Y+H+ +H+D+ N+L++ K+ +F R A E
Sbjct: 145 HICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHT 201
Query: 477 SSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y APE M T +D ++ G +L E+++ +
Sbjct: 202 GFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFGA- 381
GS +GI+ + VAIK + R +E+ L+K +NH N+I+L
Sbjct: 71 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 130
Query: 382 -----CEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
E YLV E M + +L + + E +S+ + + G+ +LH+
Sbjct: 131 TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 183
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 184 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 236
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 37/203 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 35 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 94
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 95 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 147
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S V T Y APE +
Sbjct: 148 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMVPFVVTRYYRAPEVIL 200
Query: 496 YGLVTPEMDTYAFGVVLLELITG 518
+D ++ G ++ E+I G
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L H N+I + E Y+
Sbjct: 48 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 106 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 157
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 158 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 218 CILAEMLSNR 227
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 351 VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VA+K + R ++ +E+ + + H N++ +V E+ G L + +
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 405 -HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL--RAKLA 461
+ R+ E RF ++ G+ Y H H+D+ N LLD + R K+A
Sbjct: 107 CNAGRFSED---EARFFFQQLIS-GVSYAHAMQ---VAHRDLKLENTLLDGSPAPRLKIA 159
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EY-GLVTPEMDTYAFGVVLLELIT 517
+F + +++V +S K+AVGT Y+APE + EY G V D ++ GV L ++
Sbjct: 160 DFGYSKASVL----HSQPKSAVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLV 212
Query: 518 GKEAAYK-QDGEE 529
G AY +D EE
Sbjct: 213 G---AYPFEDPEE 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 342 FRGIINGSTVAIKCMRRSI-SKEVNLL--------KKINHFNLINLFGACEHDGVFYLVY 392
R + +G +A+K +R ++ S+E L + ++ + +GA +G ++
Sbjct: 70 MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E M+ + + + + +IA+ + L +LH+ +H+D+ N+L+
Sbjct: 130 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLI 187
Query: 453 DKNLRAKLANFSFVRSAVREESGY---SSTKTA-VGTNGYMAPEYMEYGLVTPEM----- 503
+ + K+ +F SGY S KT G YMAPE + PE+
Sbjct: 188 NALGQVKMCDFGI--------SGYLVDSVAKTIDAGCKPYMAPER-----INPELNQKGY 234
Query: 504 ----DTYAFGVVLLEL 515
D ++ G+ ++EL
Sbjct: 235 SVKSDIWSLGITMIEL 250
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 27 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 86
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 87 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 139
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 140 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 192
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 38 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 97
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 98 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 150
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTA-VGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S T V T Y APE +
Sbjct: 151 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMTPYVVTRYYRAPEVIL 203
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 26/190 (13%)
Query: 346 INGSTVAIK----------CMRRSISKEVNLLKKINHFNLINL-----FGACEHDGVFYL 390
+N VAIK C R +E+ +L H N+I + E Y+
Sbjct: 48 VNKVRVAIKKISPFEHQTYCQR--TLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 391 VYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNI 450
V + ME L+K + +S + + GL Y+H+ +H+D+ N+
Sbjct: 106 VQDLMETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNL 157
Query: 451 LLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM-EYGLVTPEMDTYAFG 509
LL+ K+ +F R A + V T Y APE M T +D ++ G
Sbjct: 158 LLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 510 VVLLELITGK 519
+L E+++ +
Sbjct: 218 CILAEMLSNR 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 341 VFRGIINGSTVAIKCMRRSISKEVNLLKKI------NHFNLINLFGACEHDGVFYLVYEF 394
+ R + VA+K + R + + N+ ++I H N++ ++ E+
Sbjct: 38 LMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97
Query: 395 MENGSLSDWL-HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
G L + + + R+ E RF + G+ Y H+ H+D+ N LLD
Sbjct: 98 ASGGELYERICNAGRFSED---EARFFFQ-QLLSGVSYCHSMQ---ICHRDLKLENTLLD 150
Query: 454 KNL--RAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EY-GLVTPEMDTYA 507
+ R K+ +F + +S+V +S K+ VGT Y+APE + EY G + D ++
Sbjct: 151 GSPAPRLKICDFGYSKSSVL----HSQPKSTVGTPAYIAPEVLLRQEYDGKIA---DVWS 203
Query: 508 FGVVLLELITGKEAAYK-QDGEE 529
GV L ++ G AY +D EE
Sbjct: 204 CGVTLYVMLVG---AYPFEDPEE 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS-STKTAVGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S + V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMEPEVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 35/239 (14%)
Query: 362 KEVNLLKKINHFNLINLF--------------GACEHDGVFYLVYEFMENGSLSDWLHKK 407
+E+ ++++++H N++ +F G+ Y+V E+ME L++ L +
Sbjct: 57 REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQG 115
Query: 408 RYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD-KNLRAKLANFSFV 466
+ + R + GL Y+H+ +H+D+ N+ ++ ++L K+ +F
Sbjct: 116 ---PLLEEHARL-FMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLA 168
Query: 467 RSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP-----EMDTYAFGVVLLELITGKEA 521
R S + T Y +P L++P +D +A G + E++TGK
Sbjct: 169 RIMDPHYSHKGHLSEGLVTKWYRSPRL----LLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
Query: 522 -AYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIARE 579
A + E++ L +V + + LSV+ P N H + L I+RE
Sbjct: 225 FAGAHELEQMQLILESIPVVHEEDRQELLSVI--PVYIRNDMTEPHKPLTQLLPGISRE 281
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 339 GSVFRGIINGS-------TVAIKCMRRSIS---------KEVNLLKKINHFNLINLFG-- 380
GS +GI+ + VAIK + R +E+ L+K +NH N+I L
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVF 92
Query: 381 ----ACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCT 436
+ E Y+V E M + +L + + E +S+ + + G+ +LH+
Sbjct: 93 TPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHSA- 145
Query: 437 DPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYS-STKTAVGTNGYMAPEYME 495
G +H+D+ NI++ + K+ +F R+A G S + V T Y APE +
Sbjct: 146 --GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-----GTSFMMEPEVVTRYYRAPEVIL 198
Query: 496 YGLVTPEMDTYAFGVVLLELITGK 519
+D ++ G ++ E++ K
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 27/148 (18%)
Query: 339 GSVFRGI--INGSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGV 387
G V++ I + TVAIK +R + +EV+LLK++ H N+I L H+
Sbjct: 48 GEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR 107
Query: 388 FYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHN--CTDPGYVHKDI 445
+L++E+ EN L ++ K P+ VS + +G+++ H+ C +H+D+
Sbjct: 108 LHLIFEYAEN-DLKKYMDKN--PD-VSMRVIKSFLYQLINGVNFCHSRRC-----LHRDL 158
Query: 446 SSGNILL-----DKNLRAKLANFSFVRS 468
N+LL + K+ +F R+
Sbjct: 159 KPQNLLLSVSDASETPVLKIGDFGLARA 186
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 425 VAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVG 484
+ GL Y+H+ +H+D+ N+LL+ K+ +F R A + V
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 485 TNGYMAPEYM-EYGLVTPEMDTYAFGVVLLELITGK 519
T Y APE M T +D ++ G +L E+++ +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 40/201 (19%)
Query: 339 GSVFRGIIN-GSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G V++ N G T A+K +R + +E+++LK++ H N++ L+
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 389 YLVYEFMEN----------GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDP 438
LV+E ++ G L K L + +G+ Y C D
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKS-------------FLLQLLNGIAY---CHDR 119
Query: 439 GYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYG 497
+H+D+ N+L+++ K+A+F R+ Y+ V T Y AP+ M
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH---EVVTLWYRAPDVLMGSK 176
Query: 498 LVTPEMDTYAFGVVLLELITG 518
+ +D ++ G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 362 KEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWLHKKRYPEFVSWNCRFRI 421
+EV+LLK + H N++ L + LV+E+++ L +L ++ +
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDD--CGNIINMHNVKLF 105
Query: 422 ALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKT 481
+ GL Y C +H+D+ N+L+++ KLA+F R+ Y +
Sbjct: 106 LFQLLRGLAY---CHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN--- 159
Query: 482 AVGTNGYMAPEYM----EYGLVTPEMDTYAFGVVLLELITGK 519
V T Y P+ + +Y + ++D + G + E+ TG+
Sbjct: 160 EVVTLWYRPPDILLGSTDY---STQIDMWGVGCIFYEMATGR 198
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 84/196 (42%), Gaps = 37/196 (18%)
Query: 342 FRGIINGSTVAIKCMRRSISKE------VNL---LKKINHFNLINLFGACEHDGVFYLVY 392
R + +G +A+K +R +++ + ++L ++ ++ + +GA +G ++
Sbjct: 26 MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85
Query: 393 EFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILL 452
E M+ + + + + +IA+ + L +LH+ +H+D+ N+L+
Sbjct: 86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLI 143
Query: 453 DKNLRAKLANFSFVRSAVREESGYSSTKTA----VGTNGYMAPEYMEYGLVTPEM----- 503
+ + K+ +F SGY A G YMAPE + PE+
Sbjct: 144 NALGQVKMCDFGI--------SGYLVDDVAKDIDAGCKPYMAPER-----INPELNQKGY 190
Query: 504 ----DTYAFGVVLLEL 515
D ++ G+ ++EL
Sbjct: 191 SVKSDIWSLGITMIEL 206
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 40/201 (19%)
Query: 339 GSVFRGIIN-GSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G V++ N G T A+K +R + +E+++LK++ H N++ L+
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 389 YLVYEFMEN----------GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDP 438
LV+E ++ G L K L + +G+ Y C D
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKS-------------FLLQLLNGIAY---CHDR 119
Query: 439 GYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYG 497
+H+D+ N+L+++ K+A+F R+ Y+ V T Y AP+ M
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH---EVVTLWYRAPDVLMGSK 176
Query: 498 LVTPEMDTYAFGVVLLELITG 518
+ +D ++ G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 40/201 (19%)
Query: 339 GSVFRGIIN-GSTVAIKCMR---------RSISKEVNLLKKINHFNLINLFGACEHDGVF 388
G V++ N G T A+K +R + +E+++LK++ H N++ L+
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 389 YLVYEFMEN----------GSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDP 438
LV+E ++ G L K L + +G+ Y C D
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKS-------------FLLQLLNGIAY---CHDR 119
Query: 439 GYVHKDISSGNILLDKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPE-YMEYG 497
+H+D+ N+L+++ K+A+F R+ Y+ + T Y AP+ M
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH---EIVTLWYRAPDVLMGSK 176
Query: 498 LVTPEMDTYAFGVVLLELITG 518
+ +D ++ G + E++ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 54/265 (20%)
Query: 358 RSISKEVNLLKKIN-HFNLINL-----FGACEHD---GVFYLVYEFMENGSLSDWLHKKR 408
R+I +EV +KK++ H N++ G E D F L+ E + G L ++L K
Sbjct: 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKME 128
Query: 409 YPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNLRAKLANF----- 463
+S + +I + ++H P +H+D+ N+LL KL +F
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187
Query: 464 ---------SFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTP---EMDTYAFGVV 511
S R A+ EE +T T Y PE ++ P + D +A G +
Sbjct: 188 ISHYPDYSWSAQRRALVEEEITRNT-----TPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242
Query: 512 LLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIML 571
L L+ ++ + +DG ++ + +S+ L+ LQ N
Sbjct: 243 LY-LLCFRQHPF-EDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVN----------- 289
Query: 572 CLACIAREPESRPSMAEVVSTLMKI 596
PE R S+AEVV L +I
Sbjct: 290 --------PEERLSIAEVVHQLQEI 306
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 120/287 (41%), Gaps = 61/287 (21%)
Query: 341 VFRGIINGSTVAIKCMRRSISK----EVNLLKKIN-HFNLINLFGACEHDGVFYLVYEFM 395
VF+G G VA+K M E+ LL + + H N+I + + D Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 396 ENGSLSDWLHKKRYPEFVSWNCRFR-----IAL--DVAHGLHYLHNCTDPGYVHKDISSG 448
N +L D + K + N + + I+L +A G+ +LH+ +H+D+
Sbjct: 92 -NLNLQDLVESKNVSD---ENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQ 144
Query: 449 NILLD-------------KNLRAKLANFSFVRSAVREESGYSSTKTAV----GTNGYMAP 491
NIL+ +NLR +++F + + +SG + + GT+G+ AP
Sbjct: 145 NILVSTSSRFTADQQTGAENLRILISDFGLCK---KLDSGQXXFRXNLNNPSGTSGWRAP 201
Query: 492 EYMEYG-------LVTPEMDTYAFGVVLLELIT-GKEAAYKQDGEEILLAEAVFSMVEGG 543
E +E +T +D ++ G V +++ GK + E + +FS+ E
Sbjct: 202 ELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE-- 259
Query: 544 NAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVV 590
+ L D +L A ++ + I +P RP+ +V+
Sbjct: 260 -----MKCLHDRSLIAEATDLISQM-------IDHDPLKRPTAMKVL 294
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
++ E ME G L + ++ F I D+ + +LH+ H+D+ N
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAA-EIMRDIGTAIQFLHSHN---IAHRDVKPEN 158
Query: 450 ILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+L +K+ KL +F F + E+ ++ +T T Y+APE + D +
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 507 AFGVVLLELITGKEAAYKQDGEEI 530
+ GV++ L+ G Y G+ I
Sbjct: 214 SLGVIMYILLCGFPPFYSNTGQAI 237
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 390 LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGN 449
++ E ME G L + ++ F I D+ + +LH+ H+D+ N
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAA-EIMRDIGTAIQFLHSHN---IAHRDVKPEN 139
Query: 450 ILL---DKNLRAKLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLVTPEMDTY 506
+L +K+ KL +F F + E+ ++ +T T Y+APE + D +
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 507 AFGVVLLELITGKEAAYKQDGEEI 530
+ GV++ L+ G Y G+ I
Sbjct: 195 SLGVIMYILLCGFPPFYSNTGQAI 218
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 126 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 178
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 229
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 230 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 128 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 180
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 231
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 232 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 283
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 121 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 173
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 224
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 225 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 276
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 127 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 179
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 230
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 231 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 282
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 122 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 174
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 225
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 226 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 277
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 120 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 172
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 223
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 224 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 275
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 166 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 218
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 269
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 270 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 321
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 122 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 174
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 225
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 226 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 277
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 172 IMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 224
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 275
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 276 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 327
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 339 GSVFRG-IINGSTVAIKCM---RRSISKEVNLLKKINHFNLINLFG-----ACEHDGVFY 389
G VF+ ++ VAIK + +R ++E+ +++ + H N+++L + D VF
Sbjct: 54 GVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 390 -LVYEFMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSG 448
LV E++ H + + + + L Y+H+ G H+DI
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQ 170
Query: 449 NILLDKNLRA-KLANFSFVRSAVREESGYSSTKTAVGTNGYMAPEYMEYGLV--TPEMDT 505
N+LLD KL +F + + E S + + Y APE + +G T +D
Sbjct: 171 NLLLDPPSGVLKLIDFGSAKILIAGEPNVS----XICSRYYRAPELI-FGATNYTTNIDI 225
Query: 506 YAFGVVLLELITGK 519
++ G V+ EL+ G+
Sbjct: 226 WSTGCVMAELMQGQ 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 421 IALDVAHGLHYLHNCTDPGYVHKDISSGNILLDK---NLRAKLANFSFVRSAVREESGYS 477
I + + YLH+ H+D+ N+L N KL +F F + E + ++
Sbjct: 136 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 188
Query: 478 STKTAVGTNGYMAPEYMEYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVF 537
S T T Y+APE + D ++ GV++ L+ G Y G
Sbjct: 189 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---------L 239
Query: 538 SMVEGGNAEAKLSVLVDPNLQANKKEIAHHLIMLCLACIAREPESRPSMAEVVS 591
++ G ++ PN + + E++ + ML + EP R ++ E ++
Sbjct: 240 AISPGMKTRIRMGQYEFPNPEWS--EVSEEVKMLIRNLLKTEPTQRMTITEFMN 291
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 351 VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VA+K + R ++ +E+ + + H N++ +V E+ G L + +
Sbjct: 47 VAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 405 -HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL--RAKLA 461
+ R+ E RF ++ G+ Y H H+D+ N LLD + R K+
Sbjct: 107 CNAGRFSED---EARFFFQQLIS-GVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKIC 159
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EY-GLVTPEMDTYAFGVVLLELIT 517
+F + +S+V +S K+ VGT Y+APE + EY G V D ++ GV L ++
Sbjct: 160 DFGYSKSSVL----HSQPKSTVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLV 212
Query: 518 GKEAAYK-QDGEE 529
G AY +D EE
Sbjct: 213 G---AYPFEDPEE 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 351 VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VA+K + R ++ +E+ + + H N++ +V E+ G L + +
Sbjct: 46 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 105
Query: 405 -HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL--RAKLA 461
+ R+ E RF ++ G+ Y H H+D+ N LLD + R K+
Sbjct: 106 CNAGRFSED---EARFFFQQLIS-GVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKIC 158
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EY-GLVTPEMDTYAFGVVLLELIT 517
+F + +S+V +S K+ VGT Y+APE + EY G V D ++ GV L ++
Sbjct: 159 DFGYSKSSVL----HSQPKSTVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLV 211
Query: 518 GKEAAYK-QDGEE 529
G AY +D EE
Sbjct: 212 G---AYPFEDPEE 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 394 FMENGSLSDWLHKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLD 453
++E+ S D L+ + E + L++ L +H G VH+D+ N L +
Sbjct: 101 YLEHESFLDILNSLSFQEVREY------MLNLFKALKRIHQF---GIVHRDVKPSNFLYN 151
Query: 454 KNLR---------------AKLANFSFVRSAVREE-----------SGYSSTKTAVGTNG 487
+ L+ K+ FV+S ++E S GT G
Sbjct: 152 RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPG 211
Query: 488 YMAPEYM-EYGLVTPEMDTYAFGVVLLELITGKEAAYKQDGEEILLAEAVFSMVEGGNAE 546
+ APE + + T +D ++ GV+ L L++G+ YK + L A A + G
Sbjct: 212 FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD--LTALAQIMTIRGSRET 269
Query: 547 AKLSVLVDPNLQANKKEIAHHLIMLC 572
+ + ++ +K+ A L LC
Sbjct: 270 IQAAKTFGKSILCSKEVPAQDLRKLC 295
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 351 VAIKCMRR------SISKEVNLLKKINHFNLINLFGACEHDGVFYLVYEFMENGSLSDWL 404
VA+K + R ++ +E+ + + H N++ +V E+ G L + +
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 405 -HKKRYPEFVSWNCRFRIALDVAHGLHYLHNCTDPGYVHKDISSGNILLDKNL--RAKLA 461
+ R+ E RF ++ G+ Y H H+D+ N LLD + R K+
Sbjct: 107 CNAGRFSED---EARFFFQQLIS-GVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKIC 159
Query: 462 NFSFVRSAVREESGYSSTKTAVGTNGYMAPEYM---EY-GLVTPEMDTYAFGVVLLELIT 517
F + +S+V +S K+ VGT Y+APE + EY G V D ++ GV L ++
Sbjct: 160 AFGYSKSSVL----HSQPKSTVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLV 212
Query: 518 GKEAAYK-QDGEE 529
G AY +D EE
Sbjct: 213 G---AYPFEDPEE 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,280,103
Number of Sequences: 62578
Number of extensions: 692673
Number of successful extensions: 3862
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 1862
Number of HSP's gapped (non-prelim): 1113
length of query: 611
length of database: 14,973,337
effective HSP length: 105
effective length of query: 506
effective length of database: 8,402,647
effective search space: 4251739382
effective search space used: 4251739382
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)