Query 007268
Match_columns 610
No_of_seqs 500 out of 3047
Neff 9.0
Searched_HMMs 13730
Date Mon Mar 25 21:30:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007268.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007268hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 100.0 5.4E-40 4E-44 327.5 19.2 244 153-410 19-277 (277)
2 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.3 1.7E-12 1.3E-16 126.9 7.5 197 148-358 6-253 (283)
3 d1sxjb2 c.37.1.20 (B:7-230) Re 98.9 3.2E-09 2.4E-13 100.0 11.3 186 150-350 11-199 (224)
4 d1sxjc2 c.37.1.20 (C:12-238) R 98.9 4.3E-09 3.1E-13 99.3 11.6 181 151-347 11-194 (227)
5 d1r6bx2 c.37.1.20 (X:169-436) 98.8 2.9E-08 2.1E-12 94.9 16.4 156 154-323 18-194 (268)
6 d1njfa_ c.37.1.20 (A:) delta p 98.8 6.9E-08 5E-12 91.6 17.5 185 151-353 9-217 (239)
7 d1iqpa2 c.37.1.20 (A:2-232) Re 98.8 7.3E-09 5.3E-13 98.0 9.9 181 151-348 21-205 (231)
8 d1fnna2 c.37.1.20 (A:1-276) CD 98.8 1.8E-07 1.3E-11 89.9 19.2 169 154-323 16-205 (276)
9 d1sxje2 c.37.1.20 (E:4-255) Re 98.7 1E-08 7.4E-13 98.2 9.6 193 151-349 8-229 (252)
10 d1sxjd2 c.37.1.20 (D:26-262) R 98.7 1.9E-08 1.4E-12 95.3 9.9 195 151-351 9-208 (237)
11 d1w5sa2 c.37.1.20 (A:7-293) CD 98.6 7.4E-07 5.4E-11 86.0 17.5 200 153-352 15-259 (287)
12 d1jbka_ c.37.1.20 (A:) ClpB, A 98.6 2.9E-08 2.1E-12 89.7 6.1 152 154-319 22-194 (195)
13 d1in4a2 c.37.1.20 (A:17-254) H 98.5 3.7E-06 2.7E-10 79.1 19.4 174 151-353 6-206 (238)
14 d1sxja2 c.37.1.20 (A:295-547) 98.5 4.1E-07 3E-11 86.7 12.5 187 152-352 12-226 (253)
15 d1qvra2 c.37.1.20 (A:149-535) 98.4 3E-07 2.2E-11 92.7 11.0 156 154-323 22-197 (387)
16 d1a5ta2 c.37.1.20 (A:1-207) de 98.4 1.4E-06 1.1E-10 80.2 14.6 169 158-350 6-201 (207)
17 d1ixsb2 c.37.1.20 (B:4-242) Ho 98.4 7E-06 5.1E-10 77.2 19.7 176 151-354 6-208 (239)
18 d1ixza_ c.37.1.20 (A:) AAA dom 98.4 1.2E-06 8.9E-11 82.9 12.5 175 151-347 6-214 (247)
19 d1lv7a_ c.37.1.20 (A:) AAA dom 98.4 1.7E-06 1.2E-10 82.3 13.4 174 153-348 11-218 (256)
20 d1e32a2 c.37.1.20 (A:201-458) 98.2 3.6E-06 2.6E-10 80.3 12.3 173 154-348 4-208 (258)
21 d1r7ra3 c.37.1.20 (A:471-735) 98.0 3.5E-06 2.5E-10 80.7 8.1 153 174-348 40-214 (265)
22 d1l8qa2 c.37.1.20 (A:77-289) C 97.9 2.2E-05 1.6E-09 72.3 10.7 130 176-324 37-179 (213)
23 d1d2na_ c.37.1.20 (A:) Hexamer 97.9 1.6E-05 1.2E-09 75.0 9.7 92 154-264 9-110 (246)
24 d2gnoa2 c.37.1.20 (A:11-208) g 97.4 0.00029 2.1E-08 63.6 10.2 130 163-310 3-138 (198)
25 d1mo6a1 c.37.1.11 (A:1-269) Re 97.1 0.0016 1.2E-07 61.3 11.5 83 174-264 59-148 (269)
26 d1xp8a1 c.37.1.11 (A:15-282) R 96.9 0.0021 1.5E-07 60.5 10.2 83 174-264 56-145 (268)
27 d2qy9a2 c.37.1.10 (A:285-495) 96.7 0.0039 2.9E-07 56.1 10.7 90 172-264 6-101 (211)
28 d1m8pa3 c.37.1.15 (A:391-573) 96.7 0.00068 4.9E-08 59.4 5.1 38 174-212 5-42 (183)
29 d1lw7a2 c.37.1.1 (A:220-411) T 96.7 0.00048 3.5E-08 60.8 3.9 26 175-200 7-32 (192)
30 d1u94a1 c.37.1.11 (A:6-268) Re 96.7 0.0026 1.9E-07 59.6 9.2 83 174-263 53-141 (263)
31 d1np6a_ c.37.1.10 (A:) Molybdo 96.6 0.00053 3.8E-08 59.7 3.8 28 175-202 2-29 (170)
32 d1okkd2 c.37.1.10 (D:97-303) G 96.6 0.0037 2.7E-07 56.2 9.5 60 173-234 4-64 (207)
33 d1kaga_ c.37.1.2 (A:) Shikimat 96.6 0.00042 3.1E-08 59.7 3.0 25 176-200 3-27 (169)
34 d1tf7a2 c.37.1.11 (A:256-497) 96.5 0.0042 3E-07 57.3 9.7 41 174-216 25-65 (242)
35 d1rz3a_ c.37.1.6 (A:) Hypothet 96.5 0.0018 1.3E-07 57.6 6.8 31 172-202 19-49 (198)
36 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.5 0.00082 6E-08 60.1 4.4 29 172-200 3-31 (194)
37 d1ly1a_ c.37.1.1 (A:) Polynucl 96.5 0.0007 5.1E-08 57.8 3.7 24 176-199 3-26 (152)
38 d2bdta1 c.37.1.25 (A:1-176) Hy 96.5 0.00069 5.1E-08 58.9 3.7 25 176-200 3-27 (176)
39 d1ls1a2 c.37.1.10 (A:89-295) G 96.5 0.006 4.4E-07 54.8 10.1 59 174-234 9-68 (207)
40 d1r6bx3 c.37.1.20 (X:437-751) 96.5 0.0029 2.1E-07 61.3 8.4 102 155-266 23-133 (315)
41 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.4 0.00099 7.2E-08 58.5 4.1 27 176-202 2-28 (189)
42 d1x6va3 c.37.1.4 (A:34-228) Ad 96.4 0.00099 7.2E-08 59.3 4.1 29 174-202 18-46 (195)
43 d1vmaa2 c.37.1.10 (A:82-294) G 96.4 0.0076 5.5E-07 54.3 10.1 60 173-234 9-69 (213)
44 d1j8yf2 c.37.1.10 (F:87-297) G 96.3 0.0093 6.7E-07 53.6 10.1 60 173-234 10-70 (211)
45 d1rkba_ c.37.1.1 (A:) Adenylat 96.3 0.0009 6.5E-08 58.2 3.1 25 176-200 5-29 (173)
46 d1knqa_ c.37.1.17 (A:) Glucona 96.3 0.0014 9.9E-08 57.0 4.2 28 173-200 4-31 (171)
47 d1y63a_ c.37.1.1 (A:) Probable 96.2 0.0014 1E-07 57.1 3.9 28 173-200 3-30 (174)
48 d1qvra3 c.37.1.20 (A:536-850) 96.2 0.0032 2.4E-07 60.8 6.8 105 155-266 24-137 (315)
49 d1qhxa_ c.37.1.3 (A:) Chloramp 96.1 0.0015 1.1E-07 57.0 3.7 26 175-200 3-28 (178)
50 d1gvnb_ c.37.1.21 (B:) Plasmid 96.1 0.0026 1.9E-07 59.8 5.5 28 173-200 30-57 (273)
51 d1xjca_ c.37.1.10 (A:) Molybdo 96.1 0.0021 1.5E-07 55.8 4.3 27 176-202 2-28 (165)
52 d1ihua2 c.37.1.10 (A:308-586) 96.1 0.004 2.9E-07 58.9 6.8 52 163-216 8-59 (279)
53 d1khta_ c.37.1.1 (A:) Adenylat 96.0 0.0017 1.2E-07 57.2 3.6 27 176-202 2-28 (190)
54 d1ukza_ c.37.1.1 (A:) Uridylat 96.0 0.002 1.5E-07 57.6 4.0 28 173-200 6-33 (196)
55 d1yj5a2 c.37.1.1 (A:351-522) 5 96.0 0.0016 1.1E-07 57.2 3.0 26 173-198 12-37 (172)
56 d1bifa1 c.37.1.7 (A:37-249) 6- 95.9 0.0019 1.4E-07 58.2 3.7 27 175-201 2-28 (213)
57 d2iyva1 c.37.1.2 (A:2-166) Shi 95.9 0.0019 1.4E-07 56.1 3.4 24 178-201 4-27 (165)
58 d1szpa2 c.37.1.11 (A:145-395) 95.9 0.011 8E-07 54.2 9.0 47 174-220 33-83 (251)
59 d1zp6a1 c.37.1.25 (A:6-181) Hy 95.9 0.002 1.5E-07 56.1 3.3 26 174-199 3-28 (176)
60 d1cp2a_ c.37.1.10 (A:) Nitroge 95.9 0.0033 2.4E-07 59.2 5.1 39 176-216 2-40 (269)
61 d1viaa_ c.37.1.2 (A:) Shikimat 95.8 0.0022 1.6E-07 55.4 3.3 23 178-200 3-25 (161)
62 d1e6ca_ c.37.1.2 (A:) Shikimat 95.8 0.0022 1.6E-07 56.0 3.1 25 176-200 3-27 (170)
63 d1w44a_ c.37.1.11 (A:) NTPase 95.7 0.014 1E-06 55.9 8.9 70 176-265 124-193 (321)
64 d1ofha_ c.37.1.20 (A:) HslU {H 95.6 0.004 2.9E-07 60.1 4.6 46 155-200 15-74 (309)
65 d1ckea_ c.37.1.1 (A:) CMP kina 95.6 0.0032 2.3E-07 57.2 3.7 26 175-200 3-28 (225)
66 d1ihua1 c.37.1.10 (A:1-296) Ar 95.6 0.0069 5E-07 57.6 6.3 47 172-220 5-51 (296)
67 d1nksa_ c.37.1.1 (A:) Adenylat 95.6 0.0039 2.8E-07 54.9 4.1 27 176-202 2-28 (194)
68 d1teva_ c.37.1.1 (A:) UMP/CMP 95.5 0.0037 2.7E-07 55.6 3.8 26 175-200 1-26 (194)
69 d1ye8a1 c.37.1.11 (A:1-178) Hy 95.5 0.0034 2.4E-07 54.8 3.4 24 178-201 3-26 (178)
70 d2qm8a1 c.37.1.10 (A:5-327) Me 95.5 0.01 7.4E-07 57.3 7.2 56 163-218 37-94 (323)
71 d2afhe1 c.37.1.10 (E:1-289) Ni 95.4 0.0056 4.1E-07 58.3 5.0 40 176-217 3-42 (289)
72 d1m7ga_ c.37.1.4 (A:) Adenosin 95.4 0.0063 4.6E-07 54.9 5.0 31 170-200 19-49 (208)
73 d1sq5a_ c.37.1.6 (A:) Pantothe 95.3 0.047 3.4E-06 51.9 11.1 45 173-217 78-122 (308)
74 d2p67a1 c.37.1.10 (A:1-327) LA 95.3 0.014 9.8E-07 56.5 7.1 61 164-224 41-103 (327)
75 d2jdid3 c.37.1.11 (D:82-357) C 95.2 0.031 2.3E-06 52.0 9.4 100 165-265 57-179 (276)
76 d1uj2a_ c.37.1.6 (A:) Uridine- 95.1 0.0062 4.5E-07 55.0 4.0 27 175-201 2-28 (213)
77 d3adka_ c.37.1.1 (A:) Adenylat 95.1 0.0061 4.5E-07 54.2 3.9 27 174-200 7-33 (194)
78 d1xpua3 c.37.1.11 (A:129-417) 95.1 0.023 1.7E-06 53.4 8.0 97 165-265 32-141 (289)
79 d1zaka1 c.37.1.1 (A:3-127,A:15 95.1 0.0056 4E-07 54.2 3.5 26 175-200 3-28 (189)
80 d1g8pa_ c.37.1.20 (A:) ATPase 95.0 0.0053 3.9E-07 59.8 3.5 47 152-198 5-51 (333)
81 d1q3ta_ c.37.1.1 (A:) CMP kina 95.0 0.0066 4.8E-07 55.1 3.6 25 176-200 4-28 (223)
82 d1zina1 c.37.1.1 (A:1-125,A:16 94.8 0.007 5.1E-07 52.9 3.4 23 178-200 3-25 (182)
83 d2cdna1 c.37.1.1 (A:1-181) Ade 94.6 0.0085 6.2E-07 52.5 3.4 24 177-200 2-25 (181)
84 d1lvga_ c.37.1.1 (A:) Guanylat 94.6 0.0075 5.5E-07 53.5 3.0 25 177-201 2-26 (190)
85 d1gkya_ c.37.1.1 (A:) Guanylat 94.6 0.008 5.8E-07 53.1 3.1 26 176-201 2-27 (186)
86 d1s3ga1 c.37.1.1 (A:1-125,A:16 94.6 0.0088 6.4E-07 52.5 3.4 24 177-200 2-25 (182)
87 d1znwa1 c.37.1.1 (A:20-201) Gu 94.6 0.0093 6.8E-07 52.3 3.5 25 176-200 3-27 (182)
88 d2ak3a1 c.37.1.1 (A:0-124,A:16 94.5 0.011 8E-07 52.3 3.9 26 175-200 6-31 (189)
89 d1ak2a1 c.37.1.1 (A:14-146,A:1 94.4 0.012 9E-07 51.8 4.0 26 174-200 3-28 (190)
90 d1pzna2 c.37.1.11 (A:96-349) D 94.4 0.041 3E-06 50.4 7.8 56 174-230 35-94 (254)
91 d1akya1 c.37.1.1 (A:3-130,A:16 94.2 0.012 8.6E-07 51.5 3.4 23 178-200 5-27 (180)
92 d1odfa_ c.37.1.6 (A:) Hypothet 94.2 0.048 3.5E-06 51.2 7.9 80 174-253 26-113 (286)
93 d1e4va1 c.37.1.1 (A:1-121,A:15 94.2 0.013 9.2E-07 51.2 3.5 24 177-200 2-25 (179)
94 d1kgda_ c.37.1.1 (A:) Guanylat 94.1 0.014 1E-06 51.1 3.5 26 176-201 4-29 (178)
95 d1uf9a_ c.37.1.1 (A:) Dephosph 93.9 0.016 1.1E-06 51.1 3.5 23 174-196 2-24 (191)
96 d1nn5a_ c.37.1.1 (A:) Thymidyl 93.9 0.038 2.8E-06 49.5 6.2 28 175-202 3-30 (209)
97 d1s96a_ c.37.1.1 (A:) Guanylat 93.6 0.02 1.5E-06 51.3 3.7 26 175-200 2-27 (205)
98 d2ocpa1 c.37.1.1 (A:37-277) De 93.5 0.022 1.6E-06 52.1 3.9 28 174-201 1-28 (241)
99 d1tf7a1 c.37.1.11 (A:14-255) C 93.4 0.07 5.1E-06 48.1 7.4 41 174-215 25-65 (242)
100 d2vp4a1 c.37.1.1 (A:12-208) De 93.4 0.013 9.8E-07 51.8 2.2 27 173-199 7-33 (197)
101 d1yrba1 c.37.1.10 (A:1-244) AT 93.4 0.024 1.8E-06 51.7 4.1 25 177-201 2-26 (244)
102 d1v5wa_ c.37.1.11 (A:) Meiotic 93.3 0.083 6.1E-06 48.2 7.8 47 174-220 36-86 (258)
103 d1tmka_ c.37.1.1 (A:) Thymidyl 93.3 0.065 4.7E-06 48.1 6.7 28 174-201 2-29 (214)
104 d1ny5a2 c.37.1.20 (A:138-384) 93.3 0.053 3.9E-06 49.9 6.2 46 155-200 1-48 (247)
105 d1svma_ c.37.1.20 (A:) Papillo 93.2 0.046 3.4E-06 53.3 5.9 30 172-201 151-180 (362)
106 d1hyqa_ c.37.1.10 (A:) Cell di 93.1 0.047 3.4E-06 49.4 5.5 38 176-215 2-40 (232)
107 d1gsia_ c.37.1.1 (A:) Thymidyl 93.0 0.041 3E-06 48.9 4.8 26 177-202 2-27 (208)
108 d4tmka_ c.37.1.1 (A:) Thymidyl 93.0 0.08 5.9E-06 47.1 6.8 36 175-211 2-37 (210)
109 d1r8sa_ c.37.1.8 (A:) ADP-ribo 92.9 0.028 2E-06 47.4 3.3 22 178-199 3-24 (160)
110 d1fx0a3 c.37.1.11 (A:97-372) C 92.8 0.13 9.6E-06 47.7 8.3 88 176-265 68-170 (276)
111 d1cr2a_ c.37.1.11 (A:) Gene 4 92.7 0.31 2.3E-05 45.0 11.0 53 175-230 35-87 (277)
112 d1n0wa_ c.37.1.11 (A:) DNA rep 92.5 0.14 1E-05 45.2 7.9 46 174-219 22-71 (242)
113 d2i1qa2 c.37.1.11 (A:65-322) D 92.3 0.12 8.4E-06 46.8 7.2 57 174-231 33-103 (258)
114 d1a7ja_ c.37.1.6 (A:) Phosphor 92.1 0.022 1.6E-06 53.5 1.7 28 174-201 3-30 (288)
115 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 92.1 0.056 4.1E-06 46.6 4.3 25 173-197 11-35 (186)
116 d1upta_ c.37.1.8 (A:) ADP-ribo 92.1 0.034 2.5E-06 47.2 2.8 23 177-199 7-29 (169)
117 d1htwa_ c.37.1.18 (A:) Hypothe 91.9 0.13 9.6E-06 43.3 6.3 30 173-202 31-60 (158)
118 d1um8a_ c.37.1.20 (A:) ClpX {H 91.9 0.067 4.9E-06 52.2 5.1 26 174-199 67-92 (364)
119 d1g2912 c.37.1.12 (1:1-240) Ma 91.9 0.04 2.9E-06 50.3 3.2 25 175-199 29-53 (240)
120 d1g3qa_ c.37.1.10 (A:) Cell di 91.9 0.094 6.8E-06 47.3 5.9 37 176-214 3-40 (237)
121 d3dhwc1 c.37.1.12 (C:1-240) Me 91.8 0.041 3E-06 50.3 3.1 27 174-200 30-56 (240)
122 d2awna2 c.37.1.12 (A:4-235) Ma 91.8 0.047 3.4E-06 49.5 3.5 26 174-199 25-50 (232)
123 d1zj6a1 c.37.1.8 (A:2-178) ADP 91.8 0.077 5.6E-06 45.5 4.9 35 163-198 4-38 (177)
124 d1l2ta_ c.37.1.12 (A:) MJ0796 91.7 0.041 3E-06 49.9 3.0 26 174-199 30-55 (230)
125 d1p5zb_ c.37.1.1 (B:) Deoxycyt 91.7 0.023 1.7E-06 51.9 1.3 26 175-200 2-27 (241)
126 d1sgwa_ c.37.1.12 (A:) Putativ 91.7 0.029 2.1E-06 50.0 1.9 27 174-200 26-52 (200)
127 d1svia_ c.37.1.8 (A:) Probable 91.7 0.053 3.9E-06 47.6 3.7 25 173-197 21-45 (195)
128 d3b60a1 c.37.1.12 (A:329-581) 91.6 0.048 3.5E-06 50.3 3.5 27 174-200 40-66 (253)
129 d1z06a1 c.37.1.8 (A:32-196) Ra 91.5 0.047 3.4E-06 46.5 3.1 22 178-199 5-26 (165)
130 d1z2aa1 c.37.1.8 (A:8-171) Rab 91.5 0.047 3.4E-06 46.5 3.1 21 178-198 5-25 (164)
131 d1z0fa1 c.37.1.8 (A:8-173) Rab 91.5 0.043 3.1E-06 46.9 2.8 22 178-199 7-28 (166)
132 d2a5ja1 c.37.1.8 (A:9-181) Rab 91.5 0.042 3E-06 47.4 2.8 22 178-199 6-27 (173)
133 d2pmka1 c.37.1.12 (A:467-707) 91.5 0.044 3.2E-06 50.2 3.0 27 174-200 28-54 (241)
134 d1v43a3 c.37.1.12 (A:7-245) Hy 91.4 0.054 4E-06 49.3 3.5 27 174-200 31-57 (239)
135 d2jdia3 c.37.1.11 (A:95-379) C 91.4 0.26 1.9E-05 45.8 8.5 100 166-265 58-179 (285)
136 d1mv5a_ c.37.1.12 (A:) Multidr 91.4 0.054 3.9E-06 49.6 3.5 26 174-199 27-52 (242)
137 d1nija1 c.37.1.10 (A:2-223) Hy 91.3 0.049 3.6E-06 49.3 3.1 25 174-198 2-26 (222)
138 d1r0wa_ c.37.1.12 (A:) Cystic 91.3 0.057 4.1E-06 50.7 3.6 27 174-200 61-87 (281)
139 d1jj7a_ c.37.1.12 (A:) Peptide 91.3 0.053 3.9E-06 50.0 3.4 27 174-200 39-65 (251)
140 d3d31a2 c.37.1.12 (A:1-229) Su 91.2 0.048 3.5E-06 49.3 3.0 27 174-200 25-51 (229)
141 d2onka1 c.37.1.12 (A:1-240) Mo 91.2 0.052 3.8E-06 49.4 3.2 33 176-211 25-57 (240)
142 d1kaoa_ c.37.1.8 (A:) Rap2a {H 91.1 0.05 3.6E-06 46.5 2.8 23 177-199 5-27 (167)
143 d2ew1a1 c.37.1.8 (A:4-174) Rab 91.1 0.058 4.2E-06 46.3 3.2 23 177-199 7-29 (171)
144 d1yzqa1 c.37.1.8 (A:14-177) Ra 91.0 0.059 4.3E-06 45.8 3.2 22 178-199 3-24 (164)
145 d1z08a1 c.37.1.8 (A:17-183) Ra 91.0 0.057 4.2E-06 46.1 3.1 23 177-199 5-27 (167)
146 d1b0ua_ c.37.1.12 (A:) ATP-bin 91.0 0.053 3.9E-06 50.2 3.0 26 174-199 27-52 (258)
147 d1vhta_ c.37.1.1 (A:) Dephosph 90.9 0.055 4E-06 48.3 3.0 20 177-196 5-24 (208)
148 d2fn4a1 c.37.1.8 (A:24-196) r- 90.8 0.064 4.6E-06 46.2 3.2 23 177-199 8-30 (173)
149 d3raba_ c.37.1.8 (A:) Rab3a {R 90.7 0.063 4.6E-06 46.0 3.1 21 178-198 8-28 (169)
150 d2atva1 c.37.1.8 (A:5-172) Ras 90.7 0.063 4.6E-06 46.0 3.1 22 178-199 5-26 (168)
151 d1z0ja1 c.37.1.8 (A:2-168) Rab 90.7 0.063 4.6E-06 45.8 3.1 22 178-199 7-28 (167)
152 d1r2qa_ c.37.1.8 (A:) Rab5a {H 90.6 0.064 4.7E-06 45.9 3.1 22 178-199 9-30 (170)
153 d1g16a_ c.37.1.8 (A:) Rab-rela 90.6 0.067 4.9E-06 45.5 3.2 22 178-199 5-26 (166)
154 d1ksha_ c.37.1.8 (A:) ADP-ribo 90.6 0.059 4.3E-06 45.8 2.8 22 177-198 4-25 (165)
155 d1nrjb_ c.37.1.8 (B:) Signal r 90.6 0.069 5E-06 47.2 3.4 23 176-198 4-26 (209)
156 d2erxa1 c.37.1.8 (A:6-176) di- 90.5 0.056 4.1E-06 46.3 2.6 21 178-198 5-25 (171)
157 d1ky3a_ c.37.1.8 (A:) Rab-rela 90.5 0.067 4.8E-06 46.0 3.1 23 177-199 4-26 (175)
158 d1jjva_ c.37.1.1 (A:) Dephosph 90.5 0.064 4.6E-06 47.7 3.0 20 176-195 3-22 (205)
159 d1svsa1 c.37.1.8 (A:32-60,A:18 90.5 0.07 5.1E-06 46.4 3.3 23 177-199 4-26 (195)
160 d2erya1 c.37.1.8 (A:10-180) r- 90.4 0.071 5.1E-06 45.7 3.2 23 177-199 7-29 (171)
161 d1xtqa1 c.37.1.8 (A:3-169) GTP 90.4 0.081 5.9E-06 45.1 3.5 25 175-199 4-28 (167)
162 d2fh5b1 c.37.1.8 (B:63-269) Si 90.4 0.074 5.4E-06 47.2 3.4 24 176-199 1-24 (207)
163 d1c1ya_ c.37.1.8 (A:) Rap1A {H 90.3 0.071 5.2E-06 45.5 3.1 22 178-199 6-27 (167)
164 d2bmea1 c.37.1.8 (A:6-179) Rab 90.3 0.074 5.4E-06 45.7 3.2 21 178-198 8-28 (174)
165 d1mkya1 c.37.1.8 (A:2-172) Pro 90.2 0.075 5.5E-06 45.5 3.2 21 177-197 2-22 (171)
166 d1oxxk2 c.37.1.12 (K:1-242) Gl 90.2 0.063 4.6E-06 49.0 2.7 26 174-199 30-55 (242)
167 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 90.2 0.077 5.6E-06 45.7 3.2 23 177-199 4-26 (177)
168 d2qtvb1 c.37.1.8 (B:24-189) SA 90.1 0.076 5.5E-06 44.5 3.1 22 177-198 2-23 (166)
169 d2gjsa1 c.37.1.8 (A:91-258) Ra 90.1 0.064 4.6E-06 45.9 2.6 21 178-198 4-24 (168)
170 d1ctqa_ c.37.1.8 (A:) cH-p21 R 90.1 0.08 5.8E-06 45.1 3.2 22 178-199 6-27 (166)
171 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 90.0 0.079 5.7E-06 45.3 3.1 22 178-199 6-27 (170)
172 d2f9la1 c.37.1.8 (A:8-182) Rab 89.9 0.079 5.8E-06 45.6 3.1 22 177-198 6-27 (175)
173 d2g6ba1 c.37.1.8 (A:58-227) Ra 89.8 0.082 6E-06 45.2 3.1 23 177-199 8-30 (170)
174 d2f7sa1 c.37.1.8 (A:5-190) Rab 89.8 0.075 5.5E-06 46.2 2.9 21 178-198 8-28 (186)
175 d2eyqa3 c.37.1.19 (A:546-778) 89.8 1.3 9.7E-05 39.5 11.6 70 158-230 59-128 (233)
176 d1mh1a_ c.37.1.8 (A:) Rac {Hum 89.8 0.075 5.5E-06 46.1 2.8 23 177-199 7-29 (183)
177 d1egaa1 c.37.1.8 (A:4-182) GTP 89.7 0.081 5.9E-06 45.4 3.0 24 175-198 5-28 (179)
178 d2bcgy1 c.37.1.8 (Y:3-196) GTP 89.7 0.087 6.4E-06 46.2 3.2 22 178-199 9-30 (194)
179 d1fzqa_ c.37.1.8 (A:) ADP-ribo 89.7 0.079 5.8E-06 45.5 2.9 22 176-197 17-38 (176)
180 d2atxa1 c.37.1.8 (A:9-193) Rho 89.6 0.08 5.8E-06 46.1 2.9 22 178-199 12-33 (185)
181 d1deka_ c.37.1.1 (A:) Deoxynuc 89.6 0.099 7.2E-06 47.5 3.7 24 176-199 2-25 (241)
182 d1u0la2 c.37.1.8 (A:69-293) Pr 89.6 0.13 9.8E-06 46.1 4.4 33 163-198 86-118 (225)
183 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 89.5 0.096 7E-06 45.7 3.4 23 177-199 4-26 (200)
184 d1wf3a1 c.37.1.8 (A:3-180) GTP 89.5 0.098 7.1E-06 45.1 3.4 24 175-198 5-28 (178)
185 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 89.3 0.094 6.8E-06 45.5 3.1 22 178-199 5-26 (184)
186 d1zcba2 c.37.1.8 (A:47-75,A:20 89.3 0.084 6.1E-06 46.3 2.8 19 177-195 4-22 (200)
187 d1ji0a_ c.37.1.12 (A:) Branche 89.2 0.081 5.9E-06 48.3 2.7 27 174-200 31-57 (240)
188 d1zd9a1 c.37.1.8 (A:18-181) AD 89.2 0.099 7.2E-06 44.3 3.1 23 177-199 4-26 (164)
189 d1m7ba_ c.37.1.8 (A:) RhoE (RN 89.1 0.1 7.5E-06 45.1 3.2 22 178-199 5-26 (179)
190 d1vpla_ c.37.1.12 (A:) Putativ 89.1 0.094 6.9E-06 47.8 3.0 27 174-200 27-53 (238)
191 d1nlfa_ c.37.1.11 (A:) Hexamer 89.0 0.13 9.3E-06 47.7 4.1 26 176-201 30-55 (274)
192 d1wmsa_ c.37.1.8 (A:) Rab9a {H 88.9 0.1 7.6E-06 44.7 3.1 21 178-198 9-29 (174)
193 d1g6ha_ c.37.1.12 (A:) MJ1267 88.9 0.088 6.4E-06 48.5 2.7 26 175-200 30-55 (254)
194 d2g3ya1 c.37.1.8 (A:73-244) GT 88.8 0.1 7.4E-06 44.8 3.0 22 177-198 5-26 (172)
195 d1u8za_ c.37.1.8 (A:) Ras-rela 88.8 0.11 7.9E-06 44.4 3.1 24 176-199 5-28 (168)
196 d1e0sa_ c.37.1.8 (A:) ADP-ribo 88.8 0.13 9.7E-06 43.9 3.7 23 176-198 13-35 (173)
197 d2ngra_ c.37.1.8 (A:) CDC42 {H 88.8 0.11 8.1E-06 45.3 3.2 22 178-199 6-27 (191)
198 d1x3sa1 c.37.1.8 (A:2-178) Rab 88.6 0.11 8.2E-06 44.6 3.1 22 178-199 10-31 (177)
199 d1x1ra1 c.37.1.8 (A:10-178) Ra 88.5 0.12 8.5E-06 44.2 3.1 22 178-199 7-28 (169)
200 d1udxa2 c.37.1.8 (A:157-336) O 88.5 0.085 6.2E-06 45.6 2.2 20 178-197 4-23 (180)
201 d1kkma_ c.91.1.2 (A:) HPr kina 88.5 0.11 8.2E-06 44.7 2.9 23 176-198 15-37 (176)
202 d1byia_ c.37.1.10 (A:) Dethiob 88.4 0.15 1.1E-05 45.2 4.0 27 176-202 2-29 (224)
203 d2hyda1 c.37.1.12 (A:324-578) 88.4 0.094 6.9E-06 48.3 2.5 26 174-199 43-68 (255)
204 d1i2ma_ c.37.1.8 (A:) Ran {Hum 88.2 0.066 4.8E-06 45.9 1.2 21 178-198 6-26 (170)
205 d2cxxa1 c.37.1.8 (A:2-185) GTP 88.1 0.12 9E-06 44.4 3.0 22 177-198 2-23 (184)
206 d1l7vc_ c.37.1.12 (C:) ABC tra 88.0 0.097 7.1E-06 47.5 2.3 23 175-197 25-47 (231)
207 d2bmja1 c.37.1.8 (A:66-240) Ce 87.9 0.14 1E-05 44.1 3.2 23 177-199 7-29 (175)
208 d1g41a_ c.37.1.20 (A:) HslU {H 87.8 0.13 9.5E-06 51.4 3.4 26 175-200 49-74 (443)
209 d1lnza2 c.37.1.8 (A:158-342) O 87.7 0.096 7E-06 45.4 2.0 21 177-197 3-23 (185)
210 d2gj8a1 c.37.1.8 (A:216-376) P 87.7 0.14 1E-05 43.0 3.1 22 177-198 3-24 (161)
211 d1ko7a2 c.91.1.2 (A:130-298) H 87.7 0.14 1E-05 43.7 3.1 23 176-198 16-38 (169)
212 d1knxa2 c.91.1.2 (A:133-309) H 87.6 0.12 8.7E-06 44.5 2.5 23 176-198 16-38 (177)
213 d1moza_ c.37.1.8 (A:) ADP-ribo 87.6 0.2 1.4E-05 43.1 4.1 33 165-197 6-39 (182)
214 d1azta2 c.37.1.8 (A:35-65,A:20 87.4 0.15 1.1E-05 45.7 3.3 23 176-198 7-29 (221)
215 d1w36d1 c.37.1.19 (D:2-360) Ex 87.3 0.22 1.6E-05 48.3 4.6 61 162-225 153-214 (359)
216 d1puia_ c.37.1.8 (A:) Probable 86.8 0.12 8.9E-06 44.4 2.2 25 173-197 14-38 (188)
217 d2fu5c1 c.37.1.8 (C:3-175) Rab 86.6 0.099 7.2E-06 44.8 1.4 21 178-198 9-29 (173)
218 d1mkya2 c.37.1.8 (A:173-358) P 86.0 0.18 1.3E-05 43.4 3.0 22 177-198 10-31 (186)
219 d1tuea_ c.37.1.20 (A:) Replica 85.7 0.36 2.6E-05 42.2 4.6 39 162-200 39-78 (205)
220 d2bv3a2 c.37.1.8 (A:7-282) Elo 84.6 0.27 2E-05 45.6 3.5 27 174-200 5-31 (276)
221 d1xzpa2 c.37.1.8 (A:212-371) T 84.5 0.1 7.5E-06 43.8 0.4 22 178-199 3-24 (160)
222 d1h65a_ c.37.1.8 (A:) Chloropl 84.0 0.55 4E-05 42.9 5.4 37 162-198 17-55 (257)
223 d1pjra1 c.37.1.19 (A:1-318) DE 83.0 0.42 3.1E-05 45.0 4.3 39 177-215 26-66 (318)
224 d1uaaa1 c.37.1.19 (A:2-307) DE 82.7 0.45 3.3E-05 44.3 4.4 40 176-215 15-56 (306)
225 d2dy1a2 c.37.1.8 (A:8-274) Elo 82.2 0.42 3.1E-05 44.0 3.8 24 175-198 2-25 (267)
226 g1f2t.1 c.37.1.12 (A:,B:) Rad5 82.2 0.38 2.8E-05 44.3 3.6 23 175-197 23-45 (292)
227 d1g6oa_ c.37.1.11 (A:) Hexamer 81.4 0.38 2.8E-05 45.7 3.2 24 177-200 168-191 (323)
228 d1p9ra_ c.37.1.11 (A:) Extrace 80.2 0.93 6.8E-05 44.3 5.8 40 160-200 144-183 (401)
229 d1p6xa_ c.37.1.1 (A:) Thymidin 80.1 0.43 3.1E-05 45.5 3.1 28 175-202 6-33 (333)
230 d1t9ha2 c.37.1.8 (A:68-298) Pr 80.1 0.27 2E-05 44.1 1.5 31 165-198 90-120 (231)
231 d1g7sa4 c.37.1.8 (A:1-227) Ini 79.8 0.57 4.2E-05 41.9 3.7 25 175-199 5-29 (227)
232 d1a1va1 c.37.1.14 (A:190-325) 79.4 0.84 6.1E-05 36.8 4.4 52 174-231 7-58 (136)
233 d1wb9a2 c.37.1.12 (A:567-800) 79.0 2.6 0.00019 37.5 8.1 26 173-198 39-64 (234)
234 d1u0ja_ c.37.1.20 (A:) Rep 40 77.2 1.4 0.0001 40.3 5.6 39 162-200 89-129 (267)
235 d1wb1a4 c.37.1.8 (A:1-179) Elo 76.8 0.66 4.8E-05 39.6 3.1 21 177-197 7-27 (179)
236 d1osna_ c.37.1.1 (A:) Thymidin 76.0 0.56 4.1E-05 44.6 2.5 25 177-201 7-31 (331)
237 d1e2ka_ c.37.1.1 (A:) Thymidin 75.7 0.58 4.2E-05 44.4 2.5 26 175-200 4-29 (329)
238 g1ii8.1 c.37.1.12 (A:,B:) Rad5 74.8 0.85 6.2E-05 42.8 3.6 23 175-197 23-45 (369)
239 d1gm5a3 c.37.1.19 (A:286-549) 73.8 5.1 0.00037 36.2 8.5 42 159-200 88-129 (264)
240 d1f5na2 c.37.1.8 (A:7-283) Int 73.3 1.1 8.3E-05 41.2 3.9 28 172-199 29-56 (277)
241 d1n0ua2 c.37.1.8 (A:3-343) Elo 72.5 1.2 8.6E-05 42.4 3.9 28 173-200 15-42 (341)
242 d1tq4a_ c.37.1.8 (A:) Interfer 71.9 1.3 9.3E-05 43.3 4.1 23 175-197 56-78 (400)
243 d1qhla_ c.37.1.12 (A:) Cell di 71.1 0.46 3.3E-05 40.9 0.4 25 176-200 25-49 (222)
244 g1xew.1 c.37.1.12 (X:,Y:) Smc 70.3 0.99 7.2E-05 42.4 2.8 24 176-199 27-50 (329)
245 d2c78a3 c.37.1.8 (A:9-212) Elo 68.2 1.5 0.00011 38.3 3.3 22 177-198 5-26 (204)
246 d1jala1 c.37.1.8 (A:1-278) Ych 65.5 1.6 0.00012 40.0 3.1 22 177-198 4-25 (278)
247 d1g8fa3 c.37.1.15 (A:390-511) 64.5 2 0.00015 33.8 3.0 26 175-200 6-31 (122)
248 d1ni3a1 c.37.1.8 (A:11-306) Yc 63.3 1.9 0.00014 39.9 3.2 22 177-198 12-33 (296)
249 d1wxqa1 c.37.1.8 (A:1-319) GTP 61.2 2 0.00014 40.2 2.9 21 178-198 3-23 (319)
250 d1p3da1 c.5.1.1 (A:11-106) UDP 61.1 3.5 0.00025 30.9 3.8 25 174-198 7-31 (96)
251 d1wp9a1 c.37.1.19 (A:1-200) pu 60.4 6.9 0.0005 33.1 6.3 21 178-198 26-46 (200)
252 d1puja_ c.37.1.8 (A:) Probable 60.3 4.9 0.00036 36.5 5.5 26 174-199 111-136 (273)
253 d2olra1 c.91.1.1 (A:228-540) P 60.0 2 0.00014 39.9 2.5 18 176-193 15-32 (313)
254 d1j3ba1 c.91.1.1 (A:212-529) P 59.8 1.9 0.00014 40.1 2.4 19 176-194 15-33 (318)
255 d1yksa1 c.37.1.14 (A:185-324) 58.1 2.3 0.00017 33.5 2.5 21 175-195 7-27 (140)
256 d1e9ra_ c.37.1.11 (A:) Bacteri 58.1 4.3 0.00031 39.4 5.0 27 175-201 50-76 (433)
257 d1e69a_ c.37.1.12 (A:) Smc hea 57.5 2 0.00014 39.7 2.1 22 176-197 25-46 (308)
258 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 57.4 4.2 0.00031 41.5 5.0 37 178-214 27-65 (623)
259 d2p6ra3 c.37.1.19 (A:1-202) He 56.2 6.4 0.00046 33.6 5.3 19 177-195 42-60 (202)
260 d1ii2a1 c.91.1.1 (A:201-523) P 55.8 2.6 0.00019 39.3 2.5 18 176-193 15-32 (323)
261 d1w1wa_ c.37.1.12 (A:) Smc hea 55.5 3.2 0.00023 40.0 3.5 23 176-198 26-48 (427)
262 d1d2ea3 c.37.1.8 (A:55-250) El 48.6 4.9 0.00036 34.5 3.1 21 177-197 5-25 (196)
263 d1r0ka2 c.2.1.3 (A:3-126,A:265 47.9 21 0.0016 28.8 6.9 70 174-251 1-71 (150)
264 d1lkxa_ c.37.1.9 (A:) Myosin S 47.9 6.4 0.00047 40.9 4.4 29 172-200 83-111 (684)
265 d2fz4a1 c.37.1.19 (A:24-229) D 47.8 18 0.0013 30.7 7.0 43 155-200 68-110 (206)
266 d1d0xa2 c.37.1.9 (A:2-33,A:80- 47.3 6.6 0.00048 41.0 4.4 29 172-200 122-150 (712)
267 d1jnya3 c.37.1.8 (A:4-227) Elo 47.0 5.7 0.00042 34.7 3.4 24 177-200 5-28 (224)
268 d1t5la1 c.37.1.19 (A:2-414) Nu 46.7 16 0.0011 35.1 6.8 63 162-231 19-81 (413)
269 d1br2a2 c.37.1.9 (A:80-789) My 45.8 7.1 0.00052 40.7 4.4 29 172-200 88-116 (710)
270 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 45.5 5.7 0.00041 29.2 2.6 22 177-198 3-24 (89)
271 d2mysa2 c.37.1.9 (A:4-33,A:80- 43.7 8.1 0.00059 40.8 4.5 29 172-200 120-148 (794)
272 d1zunb3 c.37.1.8 (B:16-237) Su 43.7 6.8 0.00049 34.3 3.3 25 176-200 10-34 (222)
273 d1kk1a3 c.37.1.8 (A:6-200) Ini 43.3 5.9 0.00043 33.6 2.8 21 177-197 7-27 (195)
274 d1kk8a2 c.37.1.9 (A:1-28,A:77- 42.7 8.1 0.00059 40.8 4.3 30 171-200 117-146 (789)
275 d2akab1 c.37.1.8 (B:6-304) Dyn 41.7 14 0.001 33.5 5.4 25 174-198 25-49 (299)
276 d1c4oa1 c.37.1.19 (A:2-409) Nu 41.0 26 0.0019 33.4 7.5 62 162-230 16-77 (408)
277 d1w7ja2 c.37.1.9 (A:63-792) My 40.2 9.7 0.00071 39.8 4.4 29 172-200 91-119 (730)
278 d2qn6a3 c.37.1.8 (A:2-206) Ini 39.2 7.4 0.00054 33.3 2.8 21 177-197 10-30 (205)
279 d1ewqa2 c.37.1.12 (A:542-765) 38.7 8.7 0.00063 33.6 3.1 23 176-198 36-58 (224)
280 d1c9ka_ c.37.1.11 (A:) Adenosy 37.8 16 0.0011 30.6 4.6 35 178-218 2-36 (180)
281 d1r5ba3 c.37.1.8 (A:215-459) E 37.0 8.7 0.00063 34.1 2.9 23 177-199 26-48 (245)
282 d1f60a3 c.37.1.8 (A:2-240) Elo 37.0 10 0.00074 33.5 3.4 24 177-200 8-31 (239)
283 d1jwyb_ c.37.1.8 (B:) Dynamin 35.9 19 0.0014 32.6 5.4 24 175-198 24-47 (306)
284 d2r25b1 c.23.1.1 (B:1087-1214) 35.8 22 0.0016 27.5 5.0 108 213-323 7-124 (128)
285 d1goja_ c.37.1.9 (A:) Kinesin 29.7 21 0.0015 33.4 4.5 29 164-192 69-97 (354)
286 d1bg2a_ c.37.1.9 (A:) Kinesin 29.4 20 0.0014 33.0 4.2 29 164-192 65-93 (323)
287 d1gkub1 c.37.1.16 (B:1-250) He 29.4 13 0.00094 32.4 2.7 23 176-198 59-81 (237)
288 d2jfga1 c.5.1.1 (A:1-93) UDP-N 29.1 9.9 0.00072 27.8 1.6 22 176-198 6-27 (93)
289 d2g9na1 c.37.1.19 (A:21-238) I 27.4 88 0.0064 26.3 8.1 18 177-194 51-68 (218)
290 d1w36b1 c.37.1.19 (B:1-485) Ex 25.8 18 0.0013 34.9 3.3 27 173-199 14-41 (485)
291 d1x88a1 c.37.1.9 (A:18-362) Ki 24.4 32 0.0023 31.8 4.7 30 163-192 69-98 (345)
292 d1w5fa1 c.32.1.1 (A:22-215) Ce 23.8 1.8E+02 0.013 23.8 9.3 39 162-201 74-112 (194)
293 d2bmfa2 c.37.1.14 (A:178-482) 23.0 22 0.0016 31.9 3.1 16 175-190 9-24 (305)
294 d1q0qa2 c.2.1.3 (A:1-125,A:275 22.9 93 0.0068 24.7 6.7 68 176-251 2-70 (151)
295 d1t6na_ c.37.1.19 (A:) Spliceo 22.8 60 0.0044 27.1 6.0 19 176-194 39-57 (207)
296 d1rifa_ c.37.1.23 (A:) DNA hel 21.7 49 0.0036 29.4 5.3 44 155-201 111-154 (282)
297 d1v8ka_ c.37.1.9 (A:) Kinesin 21.7 28 0.0021 32.5 3.7 28 165-192 104-131 (362)
298 d2zfia1 c.37.1.9 (A:4-352) Kin 20.6 36 0.0026 31.5 4.2 29 164-192 76-104 (349)
299 d1xzpa1 a.24.25.1 (A:118-211,A 20.5 1.6E+02 0.012 23.4 8.1 57 38-94 31-87 (173)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=5.4e-40 Score=327.46 Aligned_cols=244 Identities=14% Similarity=0.165 Sum_probs=194.8
Q ss_pred CcCccccHHHHHHHHHHhc---CCCceEEEEEecCCchHHHHHHHHHHHhc--cCCCCCeEEEEEeCCCCChHHHHHHHH
Q 007268 153 YEAFESRASILNEIMDALK---NPNVNMLLIYGMGGIGKTTLAKKVARKAE--SDKLFDQVVLSEVSESRDVRKIQGEIA 227 (610)
Q Consensus 153 ~~~~vGR~~~~~~L~~~L~---~~~~~vv~I~G~gGiGKTtLA~~v~~~~~--~~~~f~~~~wv~vs~~~~~~~~~~~i~ 227 (610)
...++||+.++++|+++|. +...++|+|+||||+||||||+++|++.. .+.+|++++|+++++.++...+...+.
T Consensus 19 ~~~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~ 98 (277)
T d2a5yb3 19 QMTCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTD 98 (277)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHH
T ss_pred CCceeCcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHHHHH
Confidence 3457799999999999985 45678999999999999999999999855 567799999999999988777666654
Q ss_pred Hh---hCCCC------CCC-ChhHHHHHHHHHHhCCCeEEEEEeCCCCcccchhhcCCCCCCCCCeEEEEEecccccccc
Q 007268 228 DK---LGLKF------DVE-SESGRARILYDRLKKEERILVILDNIWENLDLLDVGIPHGDDHKGCKVLFTARSEEVLSG 297 (610)
Q Consensus 228 ~~---l~~~~------~~~-~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~~~~~l~~~l~~~~~gs~IivTTR~~~va~~ 297 (610)
.. ++... ... ........+......++++|+||||||+...|..+. ..||+||||||+..++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~~~~~~~------~~~srilvTTR~~~v~~~ 172 (277)
T d2a5yb3 99 ILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETIRWAQ------ELRLRCLVTTRDVEISNA 172 (277)
T ss_dssp HHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHHHHHH------HTTCEEEEEESBGGGGGG
T ss_pred HHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHHhhhhhhc------ccCceEEEEeehHHHHHh
Confidence 33 32211 111 112222233444445799999999999998887663 247899999999999765
Q ss_pred cCCccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchHHHHHHHHHHhcCCHHHHHHHHHHhcCCCC
Q 007268 298 EMESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPVSIVTVARALRNKGIREWKDALEQLRRPSS 377 (610)
Q Consensus 298 ~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai~~i~~~L~~~~~~~w~~~l~~l~~~~~ 377 (610)
.......|++++|+.++|++||.++++.....+..++++++|+++|+|+||||+++|+.|+.++.++|.+..+.|....
T Consensus 173 ~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k~~~~~~~~~~~L~~~~- 251 (277)
T d2a5yb3 173 ASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKSCEPKTFEKMAQLNNKLESRG- 251 (277)
T ss_dssp CCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSSSHHHHHHHHHHHHHHC-
T ss_pred cCCCCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHHHHHHhccCCHHHHHHHHHHHhcCc-
Confidence 4455578999999999999999999887666777789999999999999999999999999999999999888886432
Q ss_pred CCCCCchhHHHHHHHhhHccCCchhHHHHHHHh
Q 007268 378 SNFKDVQPAAFKAIELSYNKLGRDDLKNIFLLI 410 (610)
Q Consensus 378 ~~~~~~~~~i~~~l~~Sy~~L~~~~~k~cfl~l 410 (610)
...+..++.+||++||++ +|.||.++
T Consensus 252 ------~~~v~~il~~sY~~L~~~-lk~c~~~l 277 (277)
T d2a5yb3 252 ------LVGVECITPYSYKSLAMA-LQRCVEVL 277 (277)
T ss_dssp ------SSTTCCCSSSSSSSHHHH-HHHHHHTS
T ss_pred ------HHHHHHHHHHHHhcccHH-HHHHHHhC
Confidence 245678899999999999 99999875
No 2
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.27 E-value=1.7e-12 Score=126.92 Aligned_cols=197 Identities=13% Similarity=0.174 Sum_probs=115.0
Q ss_pred cCCCCCcCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCC-----CCChHHH
Q 007268 148 IPNKDYEAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSE-----SRDVRKI 222 (610)
Q Consensus 148 ~~~~~~~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~-----~~~~~~~ 222 (610)
.|......|+||++++++|.+. ..+++.|+|++|+|||+|++++++.... ...|+.+.. ......+
T Consensus 6 ~p~~~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~ 76 (283)
T d2fnaa2 6 SPKDNRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINELNL-----PYIYLDLRKFEERNYISYKDF 76 (283)
T ss_dssp SCCCSGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHHTC-----CEEEEEGGGGTTCSCCCHHHH
T ss_pred CCCCChhhCCChHHHHHHHHhc----cCCEEEEEcCCCCcHHHHHHHHHHHCCC-----CeEEEEeccccccccccHHHH
Confidence 3444568999999999999874 3468999999999999999999887643 234554432 2223333
Q ss_pred HHHHHHhhC--------------CCC------------CCCChhHHHHHHHHHHh--CCCeEEEEEeCCCCccc-----c
Q 007268 223 QGEIADKLG--------------LKF------------DVESESGRARILYDRLK--KEERILVILDNIWENLD-----L 269 (610)
Q Consensus 223 ~~~i~~~l~--------------~~~------------~~~~~~~~~~~l~~~L~--~~kr~LLVLDdv~~~~~-----~ 269 (610)
...+..... ... ........+..+.+.+. .++++++|+|++..... +
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~~ 156 (283)
T d2fnaa2 77 LLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNL 156 (283)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCC
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcccchHHH
Confidence 333332211 000 00011111223333332 36889999998853211 1
Q ss_pred -hhhcCCCCCCCCCeEEEEEecccccc----ccc-------CCccceecCCCCCHHHHHHHHHHHhCC-CCCCchHHHHH
Q 007268 270 -LDVGIPHGDDHKGCKVLFTARSEEVL----SGE-------MESRKNFPVGFLKEEEAWSLFKKMAGD-YVEGSELEEVA 336 (610)
Q Consensus 270 -~~l~~~l~~~~~gs~IivTTR~~~va----~~~-------~~~~~~~~l~~L~~~ea~~Lf~~~~~~-~~~~~~~~~~~ 336 (610)
..+... .........+++++..... ... ......+.|.+|+.+++.+++.+.+.. ....+. .
T Consensus 157 ~~~l~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~~~----~ 231 (283)
T d2fnaa2 157 LPALAYA-YDNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFKD----Y 231 (283)
T ss_dssp HHHHHHH-HHHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCCCC----H
T ss_pred HHHHHHH-HHhhhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCCCHHH----H
Confidence 111110 1122344455554443221 000 012356899999999999999887632 112222 4
Q ss_pred HHHHHHcCCchHHHHHHHHHHh
Q 007268 337 RNVVEECAGLPVSIVTVARALR 358 (610)
Q Consensus 337 ~~I~~~c~GlPLai~~i~~~L~ 358 (610)
.+|++.++|+|..+..++..+.
T Consensus 232 ~~i~~~~~G~P~~L~~~~~~~~ 253 (283)
T d2fnaa2 232 EVVYEKIGGIPGWLTYFGFIYL 253 (283)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHH
Confidence 5899999999999999987665
No 3
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.89 E-value=3.2e-09 Score=100.02 Aligned_cols=186 Identities=14% Similarity=0.128 Sum_probs=116.5
Q ss_pred CCCCcCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHh
Q 007268 150 NKDYEAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADK 229 (610)
Q Consensus 150 ~~~~~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~ 229 (610)
|....+++|.++.++.|..|+.++..+.+.++|++|+||||+|+.+++....+..-..+.-++.+...+...+...+...
T Consensus 11 P~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~~~i~~~~~~~ 90 (224)
T d1sxjb2 11 PQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHF 90 (224)
T ss_dssp CSSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHHHHHTHHHHH
T ss_pred CCCHHHhcCCHHHHHHHHHHHHcCCCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCCceehhhHHHHH
Confidence 34567899999999999999998777778899999999999999999876543111234455555554444333322221
Q ss_pred hCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCcc--cchhhcCCCCCCCCCeEEEEEecccc-cccccCCccceec
Q 007268 230 LGLKFDVESESGRARILYDRLKKEERILVILDNIWENL--DLLDVGIPHGDDHKGCKVLFTARSEE-VLSGEMESRKNFP 306 (610)
Q Consensus 230 l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~--~~~~l~~~l~~~~~gs~IivTTR~~~-va~~~~~~~~~~~ 306 (610)
....... ..++.-++|+|+++... ....+...+......+++++||.+.. +..........++
T Consensus 91 ~~~~~~~--------------~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~~i~ 156 (224)
T d1sxjb2 91 AQKKLHL--------------PPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILR 156 (224)
T ss_dssp HHBCCCC--------------CTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEE
T ss_pred HHhhccC--------------CCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHHHHhh
Confidence 1111000 01356688899997542 22222222222334566666665543 3222334557899
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchHHH
Q 007268 307 VGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPVSI 350 (610)
Q Consensus 307 l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai 350 (610)
+.+++.++-...+.+.+....-.-. .+....|++.|+|.+--+
T Consensus 157 ~~~~~~~~i~~~l~~i~~~e~~~i~-~~~l~~I~~~s~Gd~R~a 199 (224)
T d1sxjb2 157 YSKLSDEDVLKRLLQIIKLEDVKYT-NDGLEAIIFTAEGDMRQA 199 (224)
T ss_dssp CCCCCHHHHHHHHHHHHHHHTCCBC-HHHHHHHHHHHTTCHHHH
T ss_pred hcccchhhhHHHHHHHHHhcccCCC-HHHHHHHHHHcCCcHHHH
Confidence 9999999999999887742111111 256789999999987543
No 4
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.87 E-value=4.3e-09 Score=99.32 Aligned_cols=181 Identities=14% Similarity=0.139 Sum_probs=112.1
Q ss_pred CCCcCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhh
Q 007268 151 KDYEAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKL 230 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l 230 (610)
....+++|.++.++.|..|+..+..+.+.++|++|+||||+|+.+++..........+.-...+...+.......+....
T Consensus 11 ~~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 90 (227)
T d1sxjc2 11 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFA 90 (227)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHHHHH
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeeeeecchhhcc
Confidence 44578999999999999999887777788999999999999999999865432222333334343333322211111110
Q ss_pred CCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCcc--cchhhcCCCCCCCCCeEEEEEecccc-cccccCCccceecC
Q 007268 231 GLKFDVESESGRARILYDRLKKEERILVILDNIWENL--DLLDVGIPHGDDHKGCKVLFTARSEE-VLSGEMESRKNFPV 307 (610)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~--~~~~l~~~l~~~~~gs~IivTTR~~~-va~~~~~~~~~~~l 307 (610)
... .+..+++-++|+|+++... .-..+...+......+.++++|.... +..........+.+
T Consensus 91 ~~~---------------~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~i~~ 155 (227)
T d1sxjc2 91 STR---------------QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRF 155 (227)
T ss_dssp HBC---------------CSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEEC
T ss_pred ccc---------------cccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHhhhcc
Confidence 000 0012345688899997552 22222222223345677777776543 32222344578999
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCch
Q 007268 308 GFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLP 347 (610)
Q Consensus 308 ~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlP 347 (610)
.+++.++-..++.+.+....-.-+ .+....|++.++|..
T Consensus 156 ~~~~~~~i~~~l~~I~~~e~i~i~-~~~l~~i~~~s~Gd~ 194 (227)
T d1sxjc2 156 QPLPQEAIERRIANVLVHEKLKLS-PNAEKALIELSNGDM 194 (227)
T ss_dssp CCCCHHHHHHHHHHHHHTTTCCBC-HHHHHHHHHHHTTCH
T ss_pred ccccccccccccccccccccccCC-HHHHHHHHHHcCCcH
Confidence 999999999999987743222111 256778999998864
No 5
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.85 E-value=2.9e-08 Score=94.93 Aligned_cols=156 Identities=15% Similarity=0.170 Sum_probs=102.5
Q ss_pred cCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCC----CCeEEE-EEeCCCCChHHHHHHHHH
Q 007268 154 EAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKL----FDQVVL-SEVSESRDVRKIQGEIAD 228 (610)
Q Consensus 154 ~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~----f~~~~w-v~vs~~~~~~~~~~~i~~ 228 (610)
...+||++++++|+..|......-+.++|++|+|||+++..++++.....- .+..+| ++++.-.
T Consensus 18 d~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~li----------- 86 (268)
T d1r6bx2 18 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL----------- 86 (268)
T ss_dssp CCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC--------------
T ss_pred CcccChHHHHHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHh-----------
Confidence 457899999999999998766678889999999999999999988654321 233444 3332210
Q ss_pred hhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCcc----------cchhhcCCCCCCCCCeEEEEEecccccccc-
Q 007268 229 KLGLKFDVESESGRARILYDRLKKEERILVILDNIWENL----------DLLDVGIPHGDDHKGCKVLFTARSEEVLSG- 297 (610)
Q Consensus 229 ~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~----------~~~~l~~~l~~~~~gs~IivTTR~~~va~~- 297 (610)
........-.+.+..+.+.+...++.+|++|++...- +...+..|... ...-++|.||........
T Consensus 87 --ag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~-rg~i~vIgatT~eey~~~~ 163 (268)
T d1r6bx2 87 --AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS-SGKIRVIGSTTYQEFSNIF 163 (268)
T ss_dssp --CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSS-SCCCEEEEEECHHHHHCCC
T ss_pred --ccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHh-CCCCeEEEeCCHHHHHHHH
Confidence 0001112333445556666655678999999986541 22334444333 335678888877665321
Q ss_pred -----cCCccceecCCCCCHHHHHHHHHHHh
Q 007268 298 -----EMESRKNFPVGFLKEEEAWSLFKKMA 323 (610)
Q Consensus 298 -----~~~~~~~~~l~~L~~~ea~~Lf~~~~ 323 (610)
.......+.+++++.+++.+++....
T Consensus 164 e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~ 194 (268)
T d1r6bx2 164 EKDRALARRFQKIDITEPSIEETVQIINGLK 194 (268)
T ss_dssp CCTTSSGGGEEEEECCCCCHHHHHHHHHHHH
T ss_pred hhcHHHHhhhcccccCCCCHHHHHHHHHHhh
Confidence 12334689999999999999987754
No 6
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.80 E-value=6.9e-08 Score=91.59 Aligned_cols=185 Identities=10% Similarity=0.155 Sum_probs=113.8
Q ss_pred CCCcCccccHHHHHHHHHHhcCCC-ceEEEEEecCCchHHHHHHHHHHHhccCCCCC-------------------eEEE
Q 007268 151 KDYEAFESRASILNEIMDALKNPN-VNMLLIYGMGGIGKTTLAKKVARKAESDKLFD-------------------QVVL 210 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L~~~~-~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~-------------------~~~w 210 (610)
....+++|.++.++.|..++..++ ++.+.|+|++|+||||+|+.+++......... .++.
T Consensus 9 ~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 88 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIE 88 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHTCCTTEEE
T ss_pred CCHHHccChHHHHHHHHHHHHcCCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcCCCCeEEE
Confidence 346789999999999999998665 45688999999999999999988764321111 1233
Q ss_pred EEeCCCCChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCcc--cchhhcCCCCCCCCCeEEEEE
Q 007268 211 SEVSESRDVRKIQGEIADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWENL--DLLDVGIPHGDDHKGCKVLFT 288 (610)
Q Consensus 211 v~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~--~~~~l~~~l~~~~~gs~IivT 288 (610)
+..+....... .+.+.+.+..... .++.-++|||+++... ....+...+-....++.+|++
T Consensus 89 ~~~~~~~~i~~-ir~~~~~~~~~~~----------------~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~ 151 (239)
T d1njfa_ 89 IDAASRTKVED-TRDLLDNVQYAPA----------------RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLA 151 (239)
T ss_dssp EETTCSSSHHH-HHHHHHSCCCSCS----------------SSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEE
T ss_pred ecchhcCCHHH-HHHHHHHHHhccc----------------cCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEE
Confidence 33332222221 2223332221110 2456689999998652 222232222233456677777
Q ss_pred ecccc-cccccCCccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchH-HHHHH
Q 007268 289 ARSEE-VLSGEMESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPV-SIVTV 353 (610)
Q Consensus 289 TR~~~-va~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPL-ai~~i 353 (610)
|.+.. +..........+.+.+++.++..+.+...+......- .++....|++.++|.+- |+..+
T Consensus 152 tn~~~~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~-~~~~l~~i~~~s~Gd~R~ain~l 217 (239)
T d1njfa_ 152 TTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAH-EPRALQLLARAAEGSLRDALSLT 217 (239)
T ss_dssp ESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCB-CHHHHHHHHHHTTTCHHHHHHHH
T ss_pred cCCccccChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCC-CHHHHHHHHHHcCCCHHHHHHHH
Confidence 76644 2222234457899999999999998888774211111 13567789999999885 55444
No 7
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.79 E-value=7.3e-09 Score=97.98 Aligned_cols=181 Identities=14% Similarity=0.130 Sum_probs=109.8
Q ss_pred CCCcCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCC-eEEEEEeCCCCChHHHHHHHHHh
Q 007268 151 KDYEAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFD-QVVLSEVSESRDVRKIQGEIADK 229 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~-~~~wv~vs~~~~~~~~~~~i~~~ 229 (610)
....+++|.++.++.|..|+..+..+.+.|+|++|+||||+|+.+++..... .+. ..+-++.+...+...+...+...
T Consensus 21 ~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~~-~~~~~~~e~n~s~~~~~~~~~~~~~~~ 99 (231)
T d1iqpa2 21 QRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGE-NWRHNFLELNASDERGINVIREKVKEF 99 (231)
T ss_dssp CSTTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHGG-GHHHHEEEEETTCHHHHHTTHHHHHHH
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCcHHHHHHHHHHHHHhc-ccCCCeeEEecCcccchhHHHHHHHHH
Confidence 3467899999999999999998778889999999999999999999876432 111 22333433322111111111111
Q ss_pred hCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCc--ccchhhcCCCCCCCCCeEEEEEecccc-cccccCCccceec
Q 007268 230 LGLKFDVESESGRARILYDRLKKEERILVILDNIWEN--LDLLDVGIPHGDDHKGCKVLFTARSEE-VLSGEMESRKNFP 306 (610)
Q Consensus 230 l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~--~~~~~l~~~l~~~~~gs~IivTTR~~~-va~~~~~~~~~~~ 306 (610)
.... .....++.++++|+++.. ..+..+...+........+|+||.... +..........+.
T Consensus 100 ~~~~---------------~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~~i~ 164 (231)
T d1iqpa2 100 ARTK---------------PIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFR 164 (231)
T ss_dssp HHSC---------------CGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEEEEE
T ss_pred Hhhh---------------hccCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCcccccc
Confidence 0000 001246788999998754 233333222222233455666665433 3222223446899
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchH
Q 007268 307 VGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPV 348 (610)
Q Consensus 307 l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPL 348 (610)
+.+.+.++....+.+.+....-. -..+..+.|++.|+|..-
T Consensus 165 ~~~~~~~~~~~~l~~~~~~e~i~-i~~~~l~~I~~~~~gdiR 205 (231)
T d1iqpa2 165 FRPLRDEDIAKRLRYIAENEGLE-LTEEGLQAILYIAEGDMR 205 (231)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTCE-ECHHHHHHHHHHHTTCHH
T ss_pred ccccchhhHHHHHHHHHHHhCCC-CCHHHHHHHHHHcCCCHH
Confidence 99999999999999887533221 113567889999998754
No 8
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=98.75 E-value=1.8e-07 Score=89.94 Aligned_cols=169 Identities=16% Similarity=0.225 Sum_probs=111.5
Q ss_pred cCccccHHHHHHHHHHhc------CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHH
Q 007268 154 EAFESRASILNEIMDALK------NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIA 227 (610)
Q Consensus 154 ~~~vGR~~~~~~L~~~L~------~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~ 227 (610)
..++||+.+++.|.++|. ...++.+.|+|++|+|||++|+.+++....... ...+|+...........+..+.
T Consensus 16 ~~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 94 (276)
T d1fnna2 16 KRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTT-ARFVYINGFIYRNFTAIIGEIA 94 (276)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCC-CEEEEEETTTCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHhcccC-CcEEEecchhhhhhhhhhhhhH
Confidence 458999999999988885 234578999999999999999999999875422 3567788888888888999998
Q ss_pred HhhCCCCCC--CChhHHHHHHHHHHh-CCCeEEEEEeCCCCccc-----chhhcCCCCC-CCCCeEEEEEeccccccccc
Q 007268 228 DKLGLKFDV--ESESGRARILYDRLK-KEERILVILDNIWENLD-----LLDVGIPHGD-DHKGCKVLFTARSEEVLSGE 298 (610)
Q Consensus 228 ~~l~~~~~~--~~~~~~~~~l~~~L~-~~kr~LLVLDdv~~~~~-----~~~l~~~l~~-~~~gs~IivTTR~~~va~~~ 298 (610)
...+..... .........+.+.+. .....++++|+++.... ...+...... ......+|.++.........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 174 (276)
T d1fnna2 95 RSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNL 174 (276)
T ss_dssp HHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTHHHHTS
T ss_pred HhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhccccccccceEEeecCCchhhhhhc
Confidence 887765433 333444455555553 34567888888765421 1112111111 12234455555543322110
Q ss_pred ------CCccceecCCCCCHHHHHHHHHHHh
Q 007268 299 ------MESRKNFPVGFLKEEEAWSLFKKMA 323 (610)
Q Consensus 299 ------~~~~~~~~l~~L~~~ea~~Lf~~~~ 323 (610)
......+.+.+++.++..+++.+++
T Consensus 175 ~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~ 205 (276)
T d1fnna2 175 DPSTRGIMGKYVIRFSPYTKDQIFDILLDRA 205 (276)
T ss_dssp CHHHHHHHTTCEEECCCCBHHHHHHHHHHHH
T ss_pred chhhhhhhcchhccccchhHHHHHHHHHHHH
Confidence 0122458899999999999998876
No 9
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.74 E-value=1e-08 Score=98.17 Aligned_cols=193 Identities=12% Similarity=0.098 Sum_probs=101.7
Q ss_pred CCCcCccccHHHHHHHHHHhcCC-CceEEEEEecCCchHHHHHHHHHHHhccCC----CCCeEEEEEeCCC---------
Q 007268 151 KDYEAFESRASILNEIMDALKNP-NVNMLLIYGMGGIGKTTLAKKVARKAESDK----LFDQVVLSEVSES--------- 216 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L~~~-~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~----~f~~~~wv~vs~~--------- 216 (610)
....+++|+++..+.|..++... ....+.|+|++|+||||+|+.+++...... .++...+...+..
T Consensus 8 ~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (252)
T d1sxje2 8 KSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSS 87 (252)
T ss_dssp CSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------CCEEC
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchhhhhhccC
Confidence 34567999999999998888643 345678999999999999999998753211 1112222111110
Q ss_pred ------------CChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCc--ccchhhcCCCCCCCCC
Q 007268 217 ------------RDVRKIQGEIADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWEN--LDLLDVGIPHGDDHKG 282 (610)
Q Consensus 217 ------------~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~--~~~~~l~~~l~~~~~g 282 (610)
..................... ...-. ....++.-++|||+++.. ..+..+...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~~ 161 (252)
T d1sxje2 88 PYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD-----FQDSK-DGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKN 161 (252)
T ss_dssp SSEEEECCC----CCHHHHHHHHHHHTTTTC------------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTTT
T ss_pred CccceeeecccccCCcceeeehhhhhhhhhhhh-----hhhcc-cccCCCceEEEeccccccccccchhhhccccccccc
Confidence 000111111111111000000 00000 001134458899999864 2233332222223456
Q ss_pred eEEEEEecccc-cccccCCccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchHH
Q 007268 283 CKVLFTARSEE-VLSGEMESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPVS 349 (610)
Q Consensus 283 s~IivTTR~~~-va~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPLa 349 (610)
+++|+||.+.. +.....+....+++.+++.++..+++...+......-..++..+.|++.+.|.+-.
T Consensus 162 ~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s~Gd~R~ 229 (252)
T d1sxje2 162 IRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRV 229 (252)
T ss_dssp EEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHHHTTCHHH
T ss_pred ccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCcHHHHHHHHHHcCCcHHH
Confidence 77777776643 21111223457899999999999999877632111111125667899999998753
No 10
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.70 E-value=1.9e-08 Score=95.25 Aligned_cols=195 Identities=13% Similarity=0.144 Sum_probs=115.0
Q ss_pred CCCcCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCC-CCCeEEEEEeCCCCChHHHHHHHHHh
Q 007268 151 KDYEAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDK-LFDQVVLSEVSESRDVRKIQGEIADK 229 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~-~f~~~~wv~vs~~~~~~~~~~~i~~~ 229 (610)
....+++|.++.++.|..|+.....+.+.++|++|+||||+|+.+++...... .......+..+...........+-..
T Consensus 9 ~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (237)
T d1sxjd2 9 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNF 88 (237)
T ss_dssp SSTTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHHHHH
T ss_pred CCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchHHHHHHHHH
Confidence 44567899999999999999887777789999999999999999998753211 12334455555555444333332221
Q ss_pred hCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCcc--cchhhcCCCCCCCCCeEEEEEecccc-cccccCCccceec
Q 007268 230 LGLKFDVESESGRARILYDRLKKEERILVILDNIWENL--DLLDVGIPHGDDHKGCKVLFTARSEE-VLSGEMESRKNFP 306 (610)
Q Consensus 230 l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~--~~~~l~~~l~~~~~gs~IivTTR~~~-va~~~~~~~~~~~ 306 (610)
.......... . ........+.-++|+|+++... .+..+...+......+++|+||.... ...........++
T Consensus 89 ~~~~~~~~~~-~----~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~~i~ 163 (237)
T d1sxjd2 89 ARLTVSKPSK-H----DLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFR 163 (237)
T ss_dssp HHSCCCCCCT-T----HHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSEEEE
T ss_pred hhhhhhhhhH-H----HHhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchhhhhc
Confidence 1111111110 0 0111112344478999987542 22222221222334556666655433 2222223346799
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCch-HHHH
Q 007268 307 VGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLP-VSIV 351 (610)
Q Consensus 307 l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlP-Lai~ 351 (610)
+.+++.++..+++.+.+....-.- ..+..+.|++.++|.+ -||.
T Consensus 164 f~~~~~~~~~~~L~~i~~~e~i~i-~~~~l~~ia~~s~gd~R~ai~ 208 (237)
T d1sxjd2 164 FKALDASNAIDRLRFISEQENVKC-DDGVLERILDISAGDLRRGIT 208 (237)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTCCC-CHHHHHHHHHHTSSCHHHHHH
T ss_pred cccccccccchhhhhhhhhhcCcC-CHHHHHHHHHHcCCCHHHHHH
Confidence 999999999999998875322211 1366788999998865 3443
No 11
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.57 E-value=7.4e-07 Score=86.03 Aligned_cols=200 Identities=18% Similarity=0.140 Sum_probs=117.6
Q ss_pred CcCccccHHHHHHHHHHhc----C-----CCceEEEEEecCCchHHHHHHHHHHHhcc----CCCCCeEEEEEeCCCCCh
Q 007268 153 YEAFESRASILNEIMDALK----N-----PNVNMLLIYGMGGIGKTTLAKKVARKAES----DKLFDQVVLSEVSESRDV 219 (610)
Q Consensus 153 ~~~~vGR~~~~~~L~~~L~----~-----~~~~vv~I~G~gGiGKTtLA~~v~~~~~~----~~~f~~~~wv~vs~~~~~ 219 (610)
+..+.||+.++++|.+++. . +...++.|+|++|+|||++++.+++.... ........++......+.
T Consensus 15 P~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 94 (287)
T d1w5sa2 15 PPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNL 94 (287)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccch
Confidence 3568899999999988763 1 11234667899999999999999987542 112245778888888888
Q ss_pred HHHHHHHHHhhCCCCCC--CChhHHHHHHHHHHh-CCCeEEEEEeCCCCccc-----------chhh---cCCCCCCCCC
Q 007268 220 RKIQGEIADKLGLKFDV--ESESGRARILYDRLK-KEERILVILDNIWENLD-----------LLDV---GIPHGDDHKG 282 (610)
Q Consensus 220 ~~~~~~i~~~l~~~~~~--~~~~~~~~~l~~~L~-~~kr~LLVLDdv~~~~~-----------~~~l---~~~l~~~~~g 282 (610)
...+..+...++..... .........+..... .+...++++|.++.... +..+ .........-
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~ 174 (287)
T d1w5sa2 95 YTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNRI 174 (287)
T ss_dssp HHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTSCCBE
T ss_pred hhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHHHHhcchhhcccce
Confidence 88888888887765432 233333444444443 35678888898753211 1111 1121112222
Q ss_pred eEEEEEecccccc-------cccCCccceecCCCCCHHHHHHHHHHHhCCC-CCCchHHHHHHHHHHHc------CCch-
Q 007268 283 CKVLFTARSEEVL-------SGEMESRKNFPVGFLKEEEAWSLFKKMAGDY-VEGSELEEVARNVVEEC------AGLP- 347 (610)
Q Consensus 283 s~IivTTR~~~va-------~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~-~~~~~~~~~~~~I~~~c------~GlP- 347 (610)
..|++++...... .........+.+++++.++..+++..++... ....-.++..+.|+++. .|.|
T Consensus 175 ~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~~~~~~gd~R 254 (287)
T d1w5sa2 175 GFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSAR 254 (287)
T ss_dssp EEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHH
T ss_pred eEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHHHHhccccCCCCHH
Confidence 2344444332211 1011224578999999999999999876310 11111124455666654 5766
Q ss_pred HHHHH
Q 007268 348 VSIVT 352 (610)
Q Consensus 348 Lai~~ 352 (610)
.|+.+
T Consensus 255 ~ai~~ 259 (287)
T d1w5sa2 255 RAIVA 259 (287)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 34433
No 12
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.56 E-value=2.9e-08 Score=89.69 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=92.1
Q ss_pred cCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCC----CCCeEEE-EEeCCCCChHHHHHHHHH
Q 007268 154 EAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDK----LFDQVVL-SEVSESRDVRKIQGEIAD 228 (610)
Q Consensus 154 ~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~----~f~~~~w-v~vs~~~~~~~~~~~i~~ 228 (610)
...+||+++++++...|......-+.++|.+|+|||+++..++++..... ..+..+| ++++. ++.
T Consensus 22 d~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~----------LiA 91 (195)
T d1jbka_ 22 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA----------LVA 91 (195)
T ss_dssp CCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHH----------HHT
T ss_pred CCCcCcHHHHHHHHHHHhccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHH----------Hhc
Confidence 45789999999999999976677889999999999999999998865432 1233444 33221 111
Q ss_pred hhCCCCCCCChhHHHHHHHHHHh-CCCeEEEEEeCCCCcc---------cchhhcCCCCCCCCCeEEEEEecccccccc-
Q 007268 229 KLGLKFDVESESGRARILYDRLK-KEERILVILDNIWENL---------DLLDVGIPHGDDHKGCKVLFTARSEEVLSG- 297 (610)
Q Consensus 229 ~l~~~~~~~~~~~~~~~l~~~L~-~~kr~LLVLDdv~~~~---------~~~~l~~~l~~~~~gs~IivTTR~~~va~~- 297 (610)
... ....-.+.+..+.+.+. ...+.+|++|++...- +...+..|... ...-++|.||..+.....
T Consensus 92 g~~---~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~-rg~l~~IgatT~eey~~~~ 167 (195)
T d1jbka_ 92 GAK---YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA-RGELHCVGATTLDEYRQYI 167 (195)
T ss_dssp TTC---SHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHH-TTSCCEEEEECHHHHHHHT
T ss_pred cCC---ccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHh-CCCceEEecCCHHHHHHHH
Confidence 000 00011223444555543 3457999999986431 11122222111 234578887776554311
Q ss_pred -----cCCccceecCCCCCHHHHHHHH
Q 007268 298 -----EMESRKNFPVGFLKEEEAWSLF 319 (610)
Q Consensus 298 -----~~~~~~~~~l~~L~~~ea~~Lf 319 (610)
.......+.+++.+.+++..++
T Consensus 168 e~d~aL~rrF~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 168 EKDAALERRFQKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp TTCHHHHTTEEEEECCCCCHHHHHTTC
T ss_pred HcCHHHHhcCCEeecCCCCHHHHHHHh
Confidence 1233468899999988887643
No 13
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=98.49 E-value=3.7e-06 Score=79.05 Aligned_cols=174 Identities=16% Similarity=0.178 Sum_probs=101.4
Q ss_pred CCCcCccccHHHHHHHHHHhc-----CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHH
Q 007268 151 KDYEAFESRASILNEIMDALK-----NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGE 225 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L~-----~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~ 225 (610)
.....++|.+..+++|..|+. ....+.+.++|++|+||||+|+.+++..... ...++.+......++ ..
T Consensus 6 ~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~-----~~~~~~~~~~~~~~~-~~ 79 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTN-----IHVTSGPVLVKQGDM-AA 79 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCC-----EEEEETTTCCSHHHH-HH
T ss_pred CcHHHcCChHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCcHHHHHHHHHhccCCC-----cccccCcccccHHHH-HH
Confidence 346789999999999988875 3345668899999999999999999886532 233444443333222 11
Q ss_pred HHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCccc------chhhcC--------------CCCCCCCCeEE
Q 007268 226 IADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWENLD------LLDVGI--------------PHGDDHKGCKV 285 (610)
Q Consensus 226 i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~~------~~~l~~--------------~l~~~~~gs~I 285 (610)
++.. .+++..+++|.++.... ...+.. ......+...+
T Consensus 80 ~~~~----------------------~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (238)
T d1in4a2 80 ILTS----------------------LERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTL 137 (238)
T ss_dssp HHHH----------------------CCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEE
T ss_pred HHHh----------------------hccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEE
Confidence 2111 13445666676654310 000000 00001123445
Q ss_pred EEEecccccc-cc-cCCccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchHHHHHH
Q 007268 286 LFTARSEEVL-SG-EMESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPVSIVTV 353 (610)
Q Consensus 286 ivTTR~~~va-~~-~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai~~i 353 (610)
|++|...... .. .......+.+++.+.++...++...+...... ...+....|++.++|.+-.+..+
T Consensus 138 I~at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~i~~~s~gd~R~ai~~ 206 (238)
T d1in4a2 138 VGATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVE-IEDAAAEMIAKRSRGTPRIAIRL 206 (238)
T ss_dssp EEEESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCC-BCHHHHHHHHHTSTTCHHHHHHH
T ss_pred EEecCCCccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccch-hhHHHHHHHHHhCCCCHHHHHHH
Confidence 5555554322 11 11233567999999999999998877532221 12356788999999987655443
No 14
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.48 E-value=4.1e-07 Score=86.70 Aligned_cols=187 Identities=12% Similarity=0.072 Sum_probs=107.4
Q ss_pred CCcCccccHHHHHHHHHHhcC-----------------CCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeC
Q 007268 152 DYEAFESRASILNEIMDALKN-----------------PNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVS 214 (610)
Q Consensus 152 ~~~~~vGR~~~~~~L~~~L~~-----------------~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs 214 (610)
....++|.++.+++|.+|+.. ...+.+.++|++|+||||+|+.+++.... .+++++.+
T Consensus 12 ~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~-----~~~~~~~~ 86 (253)
T d1sxja2 12 NLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGY-----DILEQNAS 86 (253)
T ss_dssp SGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTC-----EEEEECTT
T ss_pred CHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHh-----hhhccccc
Confidence 457899999999999998742 23468999999999999999999987642 35567666
Q ss_pred CCCChHHHHHHHHHhh-CCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCccc-----chhhcCCCCCCCCCeEEEEE
Q 007268 215 ESRDVRKIQGEIADKL-GLKFDVESESGRARILYDRLKKEERILVILDNIWENLD-----LLDVGIPHGDDHKGCKVLFT 288 (610)
Q Consensus 215 ~~~~~~~~~~~i~~~l-~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~~-----~~~l~~~l~~~~~gs~IivT 288 (610)
...+...+... .... ........... ........++..++++|+++.... +..+..... .....+++|
T Consensus 87 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~--~~~~~ii~i 160 (253)
T d1sxja2 87 DVRSKTLLNAG-VKNALDNMSVVGYFKH---NEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCR--KTSTPLILI 160 (253)
T ss_dssp SCCCHHHHHHT-GGGGTTBCCSTTTTTC-------CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHH--HCSSCEEEE
T ss_pred cchhhHHHHHH-HHHHhhcchhhhhhhh---hhhcccccccceEEEeeeccccccchhhhhHHHhhhhc--ccccccccc
Confidence 65554433222 2221 11100000000 000001135678899999864321 222211100 112235554
Q ss_pred ecccc--cccccCCccceecCCCCCHHHHHHHHHHHhC--CCCCCchHHHHHHHHHHHcCCch-HHHHH
Q 007268 289 ARSEE--VLSGEMESRKNFPVGFLKEEEAWSLFKKMAG--DYVEGSELEEVARNVVEECAGLP-VSIVT 352 (610)
Q Consensus 289 TR~~~--va~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~--~~~~~~~~~~~~~~I~~~c~GlP-Lai~~ 352 (610)
+.... ...........+.+.+++.++-...+...+. +-.-++ +....|++.++|.. -||..
T Consensus 161 ~~~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~---~~l~~i~~~s~GDiR~ai~~ 226 (253)
T d1sxja2 161 CNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDP---NVIDRLIQTTRGDIRQVINL 226 (253)
T ss_dssp ESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCT---THHHHHHHHTTTCHHHHHHH
T ss_pred cccccccccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCH---HHHHHHHHhCCCcHHHHHHH
Confidence 43322 2222334457899999999999999888763 111122 34678999999977 44433
No 15
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.45 E-value=3e-07 Score=92.69 Aligned_cols=156 Identities=12% Similarity=0.155 Sum_probs=92.2
Q ss_pred cCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCC----CCCeEEE-EEeCCCCChHHHHHHHHH
Q 007268 154 EAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDK----LFDQVVL-SEVSESRDVRKIQGEIAD 228 (610)
Q Consensus 154 ~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~----~f~~~~w-v~vs~~~~~~~~~~~i~~ 228 (610)
.+++||+++++++++.|......-+.++|.+|+|||+|+..++++..... ..+..+| ++++.-..
T Consensus 22 d~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---------- 91 (387)
T d1qvra2 22 DPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLA---------- 91 (387)
T ss_dssp CCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC---------------
T ss_pred CCCcCcHHHHHHHHHHHhcCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhc----------
Confidence 45789999999999999866666678889999999999998888754432 2234444 44432110
Q ss_pred hhCCCCCCCChhHHHHHHHHHHhC-CCeEEEEEeCCCCcc---------cchhhcCCCCCCCCCeEEEEEecccccc---
Q 007268 229 KLGLKFDVESESGRARILYDRLKK-EERILVILDNIWENL---------DLLDVGIPHGDDHKGCKVLFTARSEEVL--- 295 (610)
Q Consensus 229 ~l~~~~~~~~~~~~~~~l~~~L~~-~kr~LLVLDdv~~~~---------~~~~l~~~l~~~~~gs~IivTTR~~~va--- 295 (610)
..+ ....-.+.+..+...+.. ..+++|++|++...- +...+..|.. ....-++|.+|......
T Consensus 92 g~~---~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L-~rg~~~~I~~tT~~ey~~~e 167 (387)
T d1qvra2 92 GAK---YRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPAL-ARGELRLIGATTLDEYREIE 167 (387)
T ss_dssp ---------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHH-HTTCCCEEEEECHHHHHHHT
T ss_pred ccC---cchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHH-hCCCcceeeecCHHHHHHhc
Confidence 000 001223344455555543 347999999997541 1111111111 12234677777655442
Q ss_pred --cccCCccceecCCCCCHHHHHHHHHHHh
Q 007268 296 --SGEMESRKNFPVGFLKEEEAWSLFKKMA 323 (610)
Q Consensus 296 --~~~~~~~~~~~l~~L~~~ea~~Lf~~~~ 323 (610)
.........+.+++.+.+++..++....
T Consensus 168 ~d~al~rrF~~v~v~ep~~~~~~~il~~~~ 197 (387)
T d1qvra2 168 KDPALERRFQPVYVDEPTVEETISILRGLK 197 (387)
T ss_dssp TCTTTCSCCCCEEECCCCHHHHHHHHHHHH
T ss_pred ccHHHHHhcccccCCCCcHHHHHHHHHHHH
Confidence 1123345689999999999999998765
No 16
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.44 E-value=1.4e-06 Score=80.19 Aligned_cols=169 Identities=11% Similarity=0.045 Sum_probs=103.4
Q ss_pred ccHHHHHHHHHHhcCCC-ceEEEEEecCCchHHHHHHHHHHHhccCCC-------------------CCeEEEEEeCCCC
Q 007268 158 SRASILNEIMDALKNPN-VNMLLIYGMGGIGKTTLAKKVARKAESDKL-------------------FDQVVLSEVSESR 217 (610)
Q Consensus 158 GR~~~~~~L~~~L~~~~-~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~-------------------f~~~~wv~vs~~~ 217 (610)
+-+...++|.+.+..++ ++.+.++|+.|+||||+|+.+++..-.... .....++......
T Consensus 6 w~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGK 85 (207)
T ss_dssp GGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTC
T ss_pred ccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhcc
Confidence 34556788888887666 456999999999999999999986532110 1111222111110
Q ss_pred ChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHh----CCCeEEEEEeCCCCcc--cchhhcCCCCCCCCCeEEEEEecc
Q 007268 218 DVRKIQGEIADKLGLKFDVESESGRARILYDRLK----KEERILVILDNIWENL--DLLDVGIPHGDDHKGCKVLFTARS 291 (610)
Q Consensus 218 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~----~~kr~LLVLDdv~~~~--~~~~l~~~l~~~~~gs~IivTTR~ 291 (610)
..-..+.+..+.+.+. .+++-++|+|+++... ....+...+-....++.+|+||++
T Consensus 86 ------------------~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~ 147 (207)
T d1a5ta2 86 ------------------NTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATRE 147 (207)
T ss_dssp ------------------SSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESC
T ss_pred ------------------cccccchhhHHhhhhhhccccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecC
Confidence 0011122333333332 2466799999998652 334443333333457788877776
Q ss_pred cc-cccccCCccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchHHH
Q 007268 292 EE-VLSGEMESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPVSI 350 (610)
Q Consensus 292 ~~-va~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai 350 (610)
.. +.....+....+.+.+++.++....+.....- .++.+..|++.++|.|-.+
T Consensus 148 ~~~ll~tI~SRc~~i~~~~~~~~~~~~~L~~~~~~------~~~~~~~i~~~s~Gs~r~a 201 (207)
T d1a5ta2 148 PERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTM------SQDALLAALRLSAGSPGAA 201 (207)
T ss_dssp GGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHCCC------CHHHHHHHHHHTTTCHHHH
T ss_pred hhhhhhhhcceeEEEecCCCCHHHHHHHHHHcCCC------CHHHHHHHHHHcCCCHHHH
Confidence 54 43323345578999999999999999876421 1356778899999998544
No 17
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=98.43 E-value=7e-06 Score=77.15 Aligned_cols=176 Identities=16% Similarity=0.144 Sum_probs=101.3
Q ss_pred CCCcCccccHHHHHHHHHHhc-----CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHH
Q 007268 151 KDYEAFESRASILNEIMDALK-----NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGE 225 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L~-----~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~ 225 (610)
.....++|-++.+++|..++. ....+-+.++|++|+||||+|+.+++..... ..+++.+...........
T Consensus 6 ~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~-----~~~~~~~~~~~~~~~~~~ 80 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVN-----LRVTSGPAIEKPGDLAAI 80 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHHTCC-----EEEEETTTCCSHHHHHHH
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHhCCC-----eEeccCCccccchhhHHH
Confidence 346788999998888887765 2345678899999999999999999876532 344444443332222222
Q ss_pred HHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCccc---------chh----hcCCCC-------CCCCCeEE
Q 007268 226 IADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWENLD---------LLD----VGIPHG-------DDHKGCKV 285 (610)
Q Consensus 226 i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~~---------~~~----l~~~l~-------~~~~gs~I 285 (610)
+...+ +.+.++++|.++.... .+. ...... ...+...+
T Consensus 81 ~~~~~----------------------~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (239)
T d1ixsb2 81 LANSL----------------------EEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTL 138 (239)
T ss_dssp HHTTC----------------------CTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEE
T ss_pred HHhhc----------------------cCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEE
Confidence 21111 2234556676653310 000 000000 01122334
Q ss_pred EEEecc-cccc-cccCCccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchHHHHHHH
Q 007268 286 LFTARS-EEVL-SGEMESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPVSIVTVA 354 (610)
Q Consensus 286 ivTTR~-~~va-~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai~~i~ 354 (610)
+.+|.+ .... .........+.+.+.+.++...++.+.+......- ..+....|++.++|.+-.+..+.
T Consensus 139 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~~~l~~ia~~s~gd~R~a~~~l 208 (239)
T d1ixsb2 139 IGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRI-TEEAALEIGRRSRGTMRVAKRLF 208 (239)
T ss_dssp EEEESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCB-CHHHHHHHHHHTTSSHHHHHHHH
T ss_pred EeeccCcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCcc-chHHHHHHHHHcCCCHHHHHHHH
Confidence 444433 2221 22233456788999999999998887775322211 24678899999999886554443
No 18
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=98.37 E-value=1.2e-06 Score=82.88 Aligned_cols=175 Identities=15% Similarity=0.204 Sum_probs=99.3
Q ss_pred CCCcCccccHHHHHHHHHHh---c---------CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCC
Q 007268 151 KDYEAFESRASILNEIMDAL---K---------NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRD 218 (610)
Q Consensus 151 ~~~~~~vGR~~~~~~L~~~L---~---------~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~ 218 (610)
....+++|-++.++.|.+.+ . ...++-|.++|++|+|||+||+.+++.... ..+.++.+
T Consensus 6 ~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~-----~~~~i~~~---- 76 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARV-----PFITASGS---- 76 (247)
T ss_dssp CCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTC-----CEEEEEHH----
T ss_pred CcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCC-----CEEEEEhH----
Confidence 34567888887776655433 2 123467999999999999999999987642 23333322
Q ss_pred hHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCcc----------------cchhhcCCCC--CCC
Q 007268 219 VRKIQGEIADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWENL----------------DLLDVGIPHG--DDH 280 (610)
Q Consensus 219 ~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~----------------~~~~l~~~l~--~~~ 280 (610)
.+ +.. .. ......+..+.+......+++|+|||++... .+..+...+. ...
T Consensus 77 --~l----~~~----~~-g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~ 145 (247)
T d1ixza_ 77 --DF----VEM----FV-GVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKD 145 (247)
T ss_dssp --HH----HHS----CT-THHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTT
T ss_pred --Hh----hhc----cc-cHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCC
Confidence 11 110 00 0112234455555555678999999986210 0111111110 122
Q ss_pred CCeEEEEEecccccccccC----CccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCch
Q 007268 281 KGCKVLFTARSEEVLSGEM----ESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLP 347 (610)
Q Consensus 281 ~gs~IivTTR~~~va~~~~----~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlP 347 (610)
.+.-||.||.......... .-...+.+.+.+.++-.++|+..+.......+ .....+++.|.|..
T Consensus 146 ~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~--~~~~~la~~t~g~s 214 (247)
T d1ixza_ 146 TAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAED--VDLALLAKRTPGFV 214 (247)
T ss_dssp CCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTT--CCHHHHHHTCTTCC
T ss_pred CCEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccc--cCHHHHHHHCCCCC
Confidence 3443444776544322111 22458999999999999999998853322221 11346777887764
No 19
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=98.36 E-value=1.7e-06 Score=82.25 Aligned_cols=174 Identities=18% Similarity=0.215 Sum_probs=102.9
Q ss_pred CcCccccHHHHHHHHHH---hc---------CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChH
Q 007268 153 YEAFESRASILNEIMDA---LK---------NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVR 220 (610)
Q Consensus 153 ~~~~vGR~~~~~~L~~~---L~---------~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~ 220 (610)
..++.|-++.+++|.+. +. ...++.+.++|++|+|||++|+.+++..... .+-++.+.-.+.
T Consensus 11 ~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~-----~~~i~~~~l~~~- 84 (256)
T d1lv7a_ 11 FADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP-----FFTISGSDFVEM- 84 (256)
T ss_dssp GGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCC-----EEEECSCSSTTS-
T ss_pred HHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCC-----EEEEEhHHhhhc-
Confidence 45788888877776543 32 1235678899999999999999999877532 333333322110
Q ss_pred HHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCc------------cc----chhhcCCCC--CCCCC
Q 007268 221 KIQGEIADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWEN------------LD----LLDVGIPHG--DDHKG 282 (610)
Q Consensus 221 ~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~------------~~----~~~l~~~l~--~~~~g 282 (610)
... .....+..+.+......+++|++||++.. .. +..+...+. ....+
T Consensus 85 -------------~~g-~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~ 150 (256)
T d1lv7a_ 85 -------------FVG-VGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEG 150 (256)
T ss_dssp -------------CCC-CCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSC
T ss_pred -------------chh-HHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence 011 12234555555555668899999998531 00 111111111 12345
Q ss_pred eEEEEEecccccc-cccC---CccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchH
Q 007268 283 CKVLFTARSEEVL-SGEM---ESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPV 348 (610)
Q Consensus 283 s~IivTTR~~~va-~~~~---~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPL 348 (610)
.-||.||...... .... .-...+.+.+.+.++-.++|+.+........+ .....+++.+.|..-
T Consensus 151 v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~--~~~~~la~~t~G~s~ 218 (256)
T d1lv7a_ 151 IIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSG 218 (256)
T ss_dssp EEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTT--CCHHHHHHTCTTCCH
T ss_pred EEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcc--cCHHHHHHhCCCCCH
Confidence 5566677765443 2122 12468999999999999999988854332221 123467788888653
No 20
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.22 E-value=3.6e-06 Score=80.26 Aligned_cols=173 Identities=13% Similarity=0.153 Sum_probs=100.9
Q ss_pred cCccccHHHHHHHHHHh----c---------CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChH
Q 007268 154 EAFESRASILNEIMDAL----K---------NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVR 220 (610)
Q Consensus 154 ~~~vGR~~~~~~L~~~L----~---------~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~ 220 (610)
..+.|-+..+++|.+.+ . -..++-+.++|++|+|||++|+.+++.... ..+.++.+.-.
T Consensus 4 ~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~-----~~~~i~~~~l~--- 75 (258)
T d1e32a2 4 DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA-----FFFLINGPEIM--- 75 (258)
T ss_dssp GGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTC-----EEEEECHHHHT---
T ss_pred hhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCC-----eEEEEEchhhc---
Confidence 45677777777776653 2 123567899999999999999999987543 23333322110
Q ss_pred HHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCcc---------cc----hhhcC--CCCCCCCCeEE
Q 007268 221 KIQGEIADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWENL---------DL----LDVGI--PHGDDHKGCKV 285 (610)
Q Consensus 221 ~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~~---------~~----~~l~~--~l~~~~~gs~I 285 (610)
.... ......+..+.+.....++++|++||++... .. ..+.. .......+.-|
T Consensus 76 -----------~~~~-g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv 143 (258)
T d1e32a2 76 -----------SKLA-GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIV 143 (258)
T ss_dssp -----------TSCT-THHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -----------cccc-ccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccE
Confidence 0000 0111223334444434688999999997531 01 11110 01123345556
Q ss_pred EEEeccccccc-ccC---CccceecCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchH
Q 007268 286 LFTARSEEVLS-GEM---ESRKNFPVGFLKEEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPV 348 (610)
Q Consensus 286 ivTTR~~~va~-~~~---~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPL 348 (610)
|.||....... ... .-...+.++..+.++-.++|..........++. ....|++.+.|+--
T Consensus 144 i~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~--~~~~la~~t~G~s~ 208 (258)
T d1e32a2 144 MAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDV--DLEQVANETHGHVG 208 (258)
T ss_dssp EEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTC--CHHHHHHHCTTCCH
T ss_pred EEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCccccccc--chhhhhhcccCCCH
Confidence 66887665431 112 234689999999999999999888643322221 13578889988643
No 21
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.05 E-value=3.5e-06 Score=80.68 Aligned_cols=153 Identities=12% Similarity=0.178 Sum_probs=86.0
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCC
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDVESESGRARILYDRLKKE 253 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~ 253 (610)
..+-|.++|++|+|||+||+.+++..... .+.++. .. +.. . ........+..+.......
T Consensus 40 ~~~giLL~Gp~GtGKT~l~~ala~~~~~~-----~~~~~~------~~----l~~----~-~~~~~~~~l~~~f~~A~~~ 99 (265)
T d1r7ra3 40 PSKGVLFYGPPGCGKTLLAKAIANECQAN-----FISIKG------PE----LLT----M-WFGESEANVREIFDKARQA 99 (265)
T ss_dssp CCCEEEEBCCTTSSHHHHHHHHHHHTTCE-----EEEECH------HH----HHT----S-CTTTHHHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCcchhHHHHHHHHhCCc-----EEEEEH------HH----hhh----c-cccchHHHHHHHHHHHHhc
Confidence 35678899999999999999999987532 222221 11 110 0 0112223344444444445
Q ss_pred CeEEEEEeCCCCcc--------c--------chhhcCCCC--CCCCCeEEEEEecccccccccC----CccceecCCCCC
Q 007268 254 ERILVILDNIWENL--------D--------LLDVGIPHG--DDHKGCKVLFTARSEEVLSGEM----ESRKNFPVGFLK 311 (610)
Q Consensus 254 kr~LLVLDdv~~~~--------~--------~~~l~~~l~--~~~~gs~IivTTR~~~va~~~~----~~~~~~~l~~L~ 311 (610)
.+++|+|||++... . ...+...+. ....+.-||.||....-..... .-...+++++.+
T Consensus 100 ~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~ 179 (265)
T d1r7ra3 100 APCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 179 (265)
T ss_dssp CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCC
T ss_pred CCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhCCHHHhCCCCccEEEEecchH
Confidence 78999999997331 0 112222221 1223445667777654321111 234689999999
Q ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHcCCchH
Q 007268 312 EEEAWSLFKKMAGDYVEGSELEEVARNVVEECAGLPV 348 (610)
Q Consensus 312 ~~ea~~Lf~~~~~~~~~~~~~~~~~~~I~~~c~GlPL 348 (610)
.++-.++|+..+.......+ .....|++++.|...
T Consensus 180 ~~~R~~il~~~l~~~~~~~~--~~l~~la~~t~g~s~ 214 (265)
T d1r7ra3 180 EKSRVAILKANLRKSPVAKD--VDLEFLAKMTNGFSG 214 (265)
T ss_dssp CHHHHHHHHHHTTCC----C--CCCHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHhccCCchhh--hhHHHHHhcCCCCCH
Confidence 99999999988754222111 113467778887653
No 22
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=97.92 E-value=2.2e-05 Score=72.29 Aligned_cols=130 Identities=15% Similarity=0.133 Sum_probs=78.1
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCCCe
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDVESESGRARILYDRLKKEER 255 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr 255 (610)
..+.|+|++|+|||.|++.+++....+ ...+++++.. ++...+...+... ....+.+.+. .-
T Consensus 37 n~l~l~G~~G~GKTHLl~A~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~--------~~~~~~~~~~--~~ 98 (213)
T d1l8qa2 37 NPIFIYGSVGTGKTHLLQAAGNEAKKR--GYRVIYSSAD------DFAQAMVEHLKKG--------TINEFRNMYK--SV 98 (213)
T ss_dssp SSEEEECSSSSSHHHHHHHHHHHHHHT--TCCEEEEEHH------HHHHHHHHHHHHT--------CHHHHHHHHH--TC
T ss_pred CcEEEECCCCCcHHHHHHHHHHHhccC--ccceEEechH------HHHHHHHHHHHcc--------chhhHHHHHh--hc
Confidence 348899999999999999999998765 3456666443 3444444433211 1223344444 35
Q ss_pred EEEEEeCCCCc---ccchhhcCCCCC--CCCCeEEEEEeccccccccc--------CCccceecCCCCCHHHHHHHHHHH
Q 007268 256 ILVILDNIWEN---LDLLDVGIPHGD--DHKGCKVLFTARSEEVLSGE--------MESRKNFPVGFLKEEEAWSLFKKM 322 (610)
Q Consensus 256 ~LLVLDdv~~~---~~~~~l~~~l~~--~~~gs~IivTTR~~~va~~~--------~~~~~~~~l~~L~~~ea~~Lf~~~ 322 (610)
-+|+|||++.. ..|+.....+.+ ...|.+||+||+.....-.. .....++.++ ++.++-.+++.+.
T Consensus 99 dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~ 177 (213)
T d1l8qa2 99 DLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEK 177 (213)
T ss_dssp SEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHH
T ss_pred cchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhCceEEEEC-CCcHHHHHHHHHH
Confidence 69999999744 344432111111 13466899999876532111 1234567775 4777777788877
Q ss_pred hC
Q 007268 323 AG 324 (610)
Q Consensus 323 ~~ 324 (610)
+.
T Consensus 178 a~ 179 (213)
T d1l8qa2 178 LK 179 (213)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 23
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.91 E-value=1.6e-05 Score=74.97 Aligned_cols=92 Identities=18% Similarity=0.242 Sum_probs=54.5
Q ss_pred cCccccHHHHHHHHHHhc----------CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHH
Q 007268 154 EAFESRASILNEIMDALK----------NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQ 223 (610)
Q Consensus 154 ~~~vGR~~~~~~L~~~L~----------~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~ 223 (610)
.+++|..+.++.+++-+. ....+-|.++|++|+|||++|+.+++..... .+.++.+....
T Consensus 9 ~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~-----~~~i~~~~~~~----- 78 (246)
T d1d2na_ 9 NGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFP-----FIKICSPDKMI----- 78 (246)
T ss_dssp TCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCS-----EEEEECGGGCT-----
T ss_pred cCCcCcCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEECcCCCCHHHHHHHHhhccccc-----ccccccccccc-----
Confidence 357777666665554432 2345678999999999999999999876532 23333322110
Q ss_pred HHHHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCC
Q 007268 224 GEIADKLGLKFDVESESGRARILYDRLKKEERILVILDNIW 264 (610)
Q Consensus 224 ~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~ 264 (610)
+ .........+..+.+...+..+++|+||+++
T Consensus 79 -------g--~~~~~~~~~i~~if~~A~~~~p~il~iDEid 110 (246)
T d1d2na_ 79 -------G--FSETAKCQAMKKIFDDAYKSQLSCVVVDDIE 110 (246)
T ss_dssp -------T--CCHHHHHHHHHHHHHHHHTSSEEEEEECCHH
T ss_pred -------c--ccccchhhhhhhhhhhhhhcccceeehhhhh
Confidence 0 0000111223344444445678999999985
No 24
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.43 E-value=0.00029 Score=63.64 Aligned_cols=130 Identities=14% Similarity=0.041 Sum_probs=75.8
Q ss_pred HHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccC--CCCCeEEEEEeCC-CCChHHHHHHHHHhhCCCCCCCCh
Q 007268 163 LNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESD--KLFDQVVLSEVSE-SRDVRKIQGEIADKLGLKFDVESE 239 (610)
Q Consensus 163 ~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~--~~f~~~~wv~vs~-~~~~~~~~~~i~~~l~~~~~~~~~ 239 (610)
++-+..++.......+.++|.+|+|||++|..+.+..... .|.| ++++.... ...+.++ +++...+...+.
T Consensus 3 ~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D-~~~i~~~~~~I~Id~I-R~i~~~~~~~~~---- 76 (198)
T d2gnoa2 3 LETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASD-VLEIDPEGENIGIDDI-RTIKDFLNYSPE---- 76 (198)
T ss_dssp HHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTT-EEEECCSSSCBCHHHH-HHHHHHHTSCCS----
T ss_pred HHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCC-EEEEeCCcCCCCHHHH-HHHHHHHhhCcc----
Confidence 4556666667788999999999999999999999866432 2333 44443322 2233333 334444433221
Q ss_pred hHHHHHHHHHHhCCCeEEEEEeCCCCc--ccchhhcCCCCCCCCCeEEEEEecccc-cccccCCccceecCCCC
Q 007268 240 SGRARILYDRLKKEERILVILDNIWEN--LDLLDVGIPHGDDHKGCKVLFTARSEE-VLSGEMESRKNFPVGFL 310 (610)
Q Consensus 240 ~~~~~~l~~~L~~~kr~LLVLDdv~~~--~~~~~l~~~l~~~~~gs~IivTTR~~~-va~~~~~~~~~~~l~~L 310 (610)
.+++=++|+|+++.. ..+..+...+-.-..++.+|++|.+.. +..........+.+.+.
T Consensus 77 ------------~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p 138 (198)
T d2gnoa2 77 ------------LYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVP 138 (198)
T ss_dssp ------------SSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCC
T ss_pred ------------cCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCc
Confidence 145569999999755 344444333333345666666666543 43333344556777644
No 25
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.07 E-value=0.0016 Score=61.27 Aligned_cols=83 Identities=23% Similarity=0.301 Sum_probs=59.2
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCC------CChhHHHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDV------ESESGRARILY 247 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~ 247 (610)
..+++-|+|++|+|||+||.+++...... -..++|++....++.+. ++++|.+.+. ...++... +.
T Consensus 59 ~g~i~e~~G~~~~GKT~l~l~~~~~~q~~--g~~~vyIDtE~~~~~e~-----a~~~GvD~d~il~~~~~~~E~~~~-~~ 130 (269)
T d1mo6a1 59 RGRVIEIYGPESSGKTTVALHAVANAQAA--GGVAAFIDAEHALDPDY-----AKKLGVDTDSLLVSQPDTGEQALE-IA 130 (269)
T ss_dssp SSSEEEEECSSSSSHHHHHHHHHHHHHHT--TCEEEEEESSCCCCHHH-----HHHHTCCGGGCEEECCSSHHHHHH-HH
T ss_pred cceeEEEecCCCcHHHHHHHHHHHHHhcC--CCEEEEEECCccCCHHH-----HHHhCCCHHHeEEecCCCHHHHHH-HH
Confidence 45799999999999999999988776654 34689999999888754 5666776432 23333333 33
Q ss_pred HHH-hCCCeEEEEEeCCC
Q 007268 248 DRL-KKEERILVILDNIW 264 (610)
Q Consensus 248 ~~L-~~~kr~LLVLDdv~ 264 (610)
+.| .+++.-|||+|.+-
T Consensus 131 ~~l~~~~~~~liIiDSi~ 148 (269)
T d1mo6a1 131 DMLIRSGALDIVVIDSVA 148 (269)
T ss_dssp HHHHHTTCEEEEEEECST
T ss_pred HHHHhcCCCCEEEEeccc
Confidence 333 44667899999884
No 26
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.85 E-value=0.0021 Score=60.48 Aligned_cols=83 Identities=22% Similarity=0.268 Sum_probs=59.3
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCC------CChhHHHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDV------ESESGRARILY 247 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~ 247 (610)
..+++-|+|++|+|||+||.+++....... ..++|++....++.+ +++.+|.+.+. .+.++.. .+.
T Consensus 56 ~g~itei~G~~~sGKT~l~l~~~~~aqk~g--~~v~yiDtE~~~~~~-----~a~~~Gvd~d~i~~~~~~~~E~~~-~~~ 127 (268)
T d1xp8a1 56 RGRITEIYGPESGGKTTLALAIVAQAQKAG--GTCAFIDAEHALDPV-----YARALGVNTDELLVSQPDNGEQAL-EIM 127 (268)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHTT--CCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHH-HHH
T ss_pred CceEEEEecCCccchHHHHHHHHHHHHhCC--CEEEEEECCccCCHH-----HHHHhCCCchhEEEEcCCCHHHHH-HHH
Confidence 457999999999999999999988766542 468999999988874 67778876532 2233333 334
Q ss_pred HHH-hCCCeEEEEEeCCC
Q 007268 248 DRL-KKEERILVILDNIW 264 (610)
Q Consensus 248 ~~L-~~~kr~LLVLDdv~ 264 (610)
+.+ .++..-|+|+|-+-
T Consensus 128 ~~l~~~~~~~liIiDSi~ 145 (268)
T d1xp8a1 128 ELLVRSGAIDVVVVDSVA 145 (268)
T ss_dssp HHHHTTTCCSEEEEECTT
T ss_pred HHHHhcCCCcEEEEeccc
Confidence 444 33456689999884
No 27
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.74 E-value=0.0039 Score=56.13 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=53.9
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCCh--HHHHHHHHHhhCCCCCC----CChhHHHHH
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDV--RKIQGEIADKLGLKFDV----ESESGRARI 245 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~--~~~~~~i~~~l~~~~~~----~~~~~~~~~ 245 (610)
.+.+.||.++|+.|+||||.+..++.....++ ..+..++. +.+.. .+-++...+.++.+... .+....+..
T Consensus 6 ~~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g--~kV~lit~-Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~ 82 (211)
T d2qy9a2 6 GKAPFVILMVGVNGVGKTTTIGKLARQFEQQG--KSVMLAAG-DTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFD 82 (211)
T ss_dssp SCTTEEEEEECCTTSCHHHHHHHHHHHHHTTT--CCEEEECC-CTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CcEEEEec-ccccccchhhhhhhhhhcCCcccccccCCCHHHHHHH
Confidence 34578999999999999999888888776432 23444443 44443 56677778888876432 222222333
Q ss_pred HHHHHhCCCeEEEEEeCCC
Q 007268 246 LYDRLKKEERILVILDNIW 264 (610)
Q Consensus 246 l~~~L~~~kr~LLVLDdv~ 264 (610)
..+.......=++++|-.-
T Consensus 83 ~~~~a~~~~~d~ilIDTaG 101 (211)
T d2qy9a2 83 AIQAAKARNIDVLIADTAG 101 (211)
T ss_dssp HHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEeccCC
Confidence 3332222233467777664
No 28
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.70 E-value=0.00068 Score=59.43 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=29.5
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEE
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSE 212 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~ 212 (610)
+..+|.|+|++|+||||+|+.++...... +++...++.
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~-~~~~~~~~~ 42 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQ-GGRSVSLLL 42 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhc-CCCchhhhh
Confidence 45789999999999999999999987653 344555543
No 29
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.67 E-value=0.00048 Score=60.78 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=23.6
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.+.|+|.|++|+||||||+.+++...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~ 32 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFN 32 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 57899999999999999999998754
No 30
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.66 E-value=0.0026 Score=59.65 Aligned_cols=83 Identities=22% Similarity=0.276 Sum_probs=56.3
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCC------CChhHHHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDV------ESESGRARILY 247 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~ 247 (610)
..+++-|+|++|+||||||.+++...... -..++|++....++.. .++.+|.+.+. ...++....+.
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~q~~--g~~~vyidtE~~~~~~-----~a~~~Gvd~d~v~~~~~~~~E~~~~~i~ 125 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAAQRE--GKTCAFIDAEHALDPI-----YARKLGVDIDNLLCSQPDTGEQALEICD 125 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHT--TCCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHHHHH
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHHHcC--CCEEEEEccccccCHH-----HHHHhCCCHHHEEEecCCCHHHHHHHHH
Confidence 34799999999999999999998887654 3468999999888764 36677776432 22223333332
Q ss_pred HHHhCCCeEEEEEeCC
Q 007268 248 DRLKKEERILVILDNI 263 (610)
Q Consensus 248 ~~L~~~kr~LLVLDdv 263 (610)
.....+..-|+|+|.+
T Consensus 126 ~l~~~~~~~liViDSi 141 (263)
T d1u94a1 126 ALARSGAVDVIVVDSV 141 (263)
T ss_dssp HHHHHTCCSEEEEECG
T ss_pred HHHhcCCCCEEEEECc
Confidence 2223344568888877
No 31
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.63 E-value=0.00053 Score=59.66 Aligned_cols=28 Identities=32% Similarity=0.392 Sum_probs=24.7
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
.++++|+|+.|+|||||+..+.+....+
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~~~ 29 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALCAR 29 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHC
Confidence 4699999999999999999999876654
No 32
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.62 E-value=0.0037 Score=56.23 Aligned_cols=60 Identities=22% Similarity=0.328 Sum_probs=45.5
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCC-CCChHHHHHHHHHhhCCCC
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSE-SRDVRKIQGEIADKLGLKF 234 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~-~~~~~~~~~~i~~~l~~~~ 234 (610)
++.+++.++|+.|+||||.+..++......+ ..+..+++.. .....+-++..++.++.+.
T Consensus 4 ~~~~vi~lvGptGvGKTTTiaKLA~~~~~~g--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~ 64 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLG--KKVMFCAGDTFRAAGGTQLSEWGKRLSIPV 64 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTTT--CCEEEECCCCSSTTHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CcEEEEEeccccccchhhHhhcccccCceE
Confidence 4678999999999999999888888776432 3577777664 3456677788888888764
No 33
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=96.61 E-value=0.00042 Score=59.75 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+.|.|.|++|+||||+|+.++....
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~ 27 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLN 27 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhC
Confidence 4688889999999999999999864
No 34
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.53 E-value=0.0042 Score=57.31 Aligned_cols=41 Identities=27% Similarity=0.395 Sum_probs=33.4
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCC
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSES 216 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~ 216 (610)
...++.|+|.+|+|||++|.+++...... ...++|++....
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~~~~~--~~~~~~is~e~~ 65 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVENACAN--KERAILFAYEES 65 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHHTT--TCCEEEEESSSC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHh--ccccceeeccCC
Confidence 45799999999999999999999886543 567888877543
No 35
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.53 E-value=0.0018 Score=57.64 Aligned_cols=31 Identities=29% Similarity=0.366 Sum_probs=26.7
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
..++-+|+|.|.+|+||||||+.+.......
T Consensus 19 ~~~~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 19 TAGRLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp CSSSEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHhccc
Confidence 4566789999999999999999999887654
No 36
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.52 E-value=0.00082 Score=60.14 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=25.8
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.+.+.+|.|.|++|+||||+|+.+++...
T Consensus 3 ~~kp~iI~i~G~pGSGKsT~a~~La~~~g 31 (194)
T d1qf9a_ 3 KSKPNVVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp CCCCEEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHHHC
Confidence 45778999999999999999999998764
No 37
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.51 E-value=0.0007 Score=57.79 Aligned_cols=24 Identities=33% Similarity=0.538 Sum_probs=21.0
Q ss_pred eEEEEEecCCchHHHHHHHHHHHh
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
++|.|+|++|+||||+|+.+....
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHhC
Confidence 578899999999999999987653
No 38
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.49 E-value=0.00069 Score=58.93 Aligned_cols=25 Identities=32% Similarity=0.646 Sum_probs=22.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
++|.|.|++|+||||+|+.+.....
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~ 27 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLD 27 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcC
Confidence 6899999999999999999987653
No 39
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.49 E-value=0.006 Score=54.83 Aligned_cols=59 Identities=24% Similarity=0.327 Sum_probs=41.8
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCC-CChHHHHHHHHHhhCCCC
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSES-RDVRKIQGEIADKLGLKF 234 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~-~~~~~~~~~i~~~l~~~~ 234 (610)
+.+|+.++|+.|+||||.+..++.....+ -..+..+++... ....+.++...+.++.+.
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~ 68 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYYKGK--GRRPLLVAADTQRPAAREQLRLLGEKVGVPV 68 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHHHT--TCCEEEEECCSSCHHHHHHHHHHHHHHTCCE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHC--CCcEEEEecccccchHHHHHHHHHHhcCCcc
Confidence 45799999999999999988888777654 234566655432 234566677777777764
No 40
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.47 E-value=0.0029 Score=61.26 Aligned_cols=102 Identities=18% Similarity=0.269 Sum_probs=58.8
Q ss_pred CccccHHHHHHHHHHhc-------C-C-CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHH
Q 007268 155 AFESRASILNEIMDALK-------N-P-NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGE 225 (610)
Q Consensus 155 ~~vGR~~~~~~L~~~L~-------~-~-~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~ 225 (610)
.++|.++.++.+...+. + + ...++.++|+.|+|||.||+.++.-.. ...+-++++.-.+...
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~-----~~~i~~d~s~~~~~~~---- 93 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-----IELLRFDMSEYMERHT---- 93 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHT-----CEEEEEEGGGCSSSSC----
T ss_pred eecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhcc-----CCeeEeccccccchhh----
Confidence 46788888888766553 1 2 245788999999999999999998753 3455556553321110
Q ss_pred HHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCc
Q 007268 226 IADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWEN 266 (610)
Q Consensus 226 i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~ 266 (610)
+.+-+|.+.. -.....-..+...+......+++||+++..
T Consensus 94 ~~~l~g~~~g-y~g~~~~~~l~~~~~~~~~~vvl~DeieKa 133 (315)
T d1r6bx3 94 VSRLIGAPPG-YVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 133 (315)
T ss_dssp CSSSCCCCSC-SHHHHHTTHHHHHHHHCSSEEEEEETGGGS
T ss_pred hhhhcccCCC-ccccccCChhhHHHHhCccchhhhcccccc
Confidence 0011121111 000111122344444456789999999754
No 41
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.39 E-value=0.00099 Score=58.51 Aligned_cols=27 Identities=33% Similarity=0.500 Sum_probs=24.0
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
+.|.|+|++|+|||||++.++......
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHC
Confidence 579999999999999999999887654
No 42
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.38 E-value=0.00099 Score=59.32 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=25.1
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
+..+|.|+|++|+||||+|+.++......
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 34688899999999999999999887654
No 43
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.38 E-value=0.0076 Score=54.32 Aligned_cols=60 Identities=20% Similarity=0.272 Sum_probs=43.9
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCC-CChHHHHHHHHHhhCCCC
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSES-RDVRKIQGEIADKLGLKF 234 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~-~~~~~~~~~i~~~l~~~~ 234 (610)
.++.+|.++|+.|+||||.+..++.+...++ ..+..+++... ....+-++..++.++.+.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~ 69 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEG--KSVVLAAADTFRAAAIEQLKIWGERVGATV 69 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTT--CCEEEEEECTTCHHHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CceEEEeecccccchhHHHHHHhhhcCccc
Confidence 4678999999999999998888887775442 45777766543 344566777778887754
No 44
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.29 E-value=0.0093 Score=53.65 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=38.6
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCC-CChHHHHHHHHHhhCCCC
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSES-RDVRKIQGEIADKLGLKF 234 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~-~~~~~~~~~i~~~l~~~~ 234 (610)
..+.||.++|+.|+||||.+..++.....+. ..+..|++... ....+-++..++.++.+.
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g--~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~ 70 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKG--FKVGLVGADVYRPAALEQLQQLGQQIGVPV 70 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTT--CCEEEEECCCSSHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CceEEEEeeccccchhHHHHHhccccCcce
Confidence 4678999999999999998888887776442 24666766533 234456666777777764
No 45
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.29 E-value=0.0009 Score=58.23 Aligned_cols=25 Identities=44% Similarity=0.666 Sum_probs=22.0
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
..|.|.|++|+||||+|+.++....
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~ 29 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSG 29 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
Confidence 4577999999999999999998764
No 46
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.26 E-value=0.0014 Score=57.01 Aligned_cols=28 Identities=25% Similarity=0.538 Sum_probs=24.9
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...+++.|.|++|+||||+|+.+.....
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l~ 31 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQLH 31 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4568999999999999999999998764
No 47
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.20 E-value=0.0014 Score=57.07 Aligned_cols=28 Identities=36% Similarity=0.546 Sum_probs=24.2
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
++...|.|.|++|+||||+|+.+++...
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 4556799999999999999999998753
No 48
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=96.18 E-value=0.0032 Score=60.81 Aligned_cols=105 Identities=16% Similarity=0.282 Sum_probs=56.2
Q ss_pred CccccHHHHHHHHHHhc-------C-C-CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHH
Q 007268 155 AFESRASILNEIMDALK-------N-P-NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGE 225 (610)
Q Consensus 155 ~~vGR~~~~~~L~~~L~-------~-~-~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~ 225 (610)
.++|.++.++.+...+. + . ...++.++|+.|+|||.+|+.+++..-.. -...+-++.+...+...+
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~--~~~~~~~~~~~~~~~~~~--- 98 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT--EEAMIRIDMTEYMEKHAV--- 98 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS--GGGEEEECTTTCCSSGGG---
T ss_pred eEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCC--CcceEEEeccccccchhh---
Confidence 35677777777655443 1 2 23478899999999999999999886321 123344444443322111
Q ss_pred HHHhhCCCCCCCChhHHHHHHHHHHhCCCeEEEEEeCCCCc
Q 007268 226 IADKLGLKFDVESESGRARILYDRLKKEERILVILDNIWEN 266 (610)
Q Consensus 226 i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr~LLVLDdv~~~ 266 (610)
..-+|.++.-.. ...-..+.+.+.+....+++||+++..
T Consensus 99 -~~L~g~~~gyvG-~~~~~~l~~~~~~~p~~Vvl~DEieK~ 137 (315)
T d1qvra3 99 -SRLIGAPPGYVG-YEEGGQLTEAVRRRPYSVILFDEIEKA 137 (315)
T ss_dssp -GGC---------------CHHHHHHHCSSEEEEESSGGGS
T ss_pred -hhhcCCCCCCcC-cccCChHHHHHHhCCCcEEEEehHhhc
Confidence 001111111000 011123455555556789999999854
No 49
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.12 E-value=0.0015 Score=56.96 Aligned_cols=26 Identities=15% Similarity=0.331 Sum_probs=23.6
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.++|.|.|++|+||||+|+.+++...
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~ 28 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcC
Confidence 46899999999999999999998864
No 50
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=96.08 E-value=0.0026 Score=59.78 Aligned_cols=28 Identities=25% Similarity=0.401 Sum_probs=24.6
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
..++.|.++|++|+||||||+.++....
T Consensus 30 ~~P~~ilL~GpPGtGKT~la~~la~~~~ 57 (273)
T d1gvnb_ 30 ESPTAFLLGGQPGSGKTSLRSAIFEETQ 57 (273)
T ss_dssp SSCEEEEEECCTTSCTHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 4567799999999999999999998865
No 51
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.06 E-value=0.0021 Score=55.80 Aligned_cols=27 Identities=33% Similarity=0.362 Sum_probs=24.6
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
++++|+|..|+|||||+..+......+
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~ 28 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVRE 28 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 689999999999999999999887765
No 52
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=96.06 E-value=0.004 Score=58.88 Aligned_cols=52 Identities=25% Similarity=0.457 Sum_probs=40.7
Q ss_pred HHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCC
Q 007268 163 LNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSES 216 (610)
Q Consensus 163 ~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~ 216 (610)
+..+.+.+..++.++|.+.|-||+||||+|..++.....+. ..+.-|+....
T Consensus 8 ~~~~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G--~rVllvD~Dp~ 59 (279)
T d1ihua2 8 LSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMG--FDVHLTTSDPA 59 (279)
T ss_dssp HHHHHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEESCCC
T ss_pred HHHHHHHhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CcEEEEeCCCC
Confidence 55677777788899999999999999999999888776542 34666766644
No 53
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.03 E-value=0.0017 Score=57.17 Aligned_cols=27 Identities=19% Similarity=0.439 Sum_probs=24.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
++|+|.|++|+||||+++.+.......
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~ 28 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKE 28 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999887654
No 54
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.97 E-value=0.002 Score=57.55 Aligned_cols=28 Identities=25% Similarity=0.462 Sum_probs=25.1
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+..++|.|.|++|+||||+|+.+++.+.
T Consensus 6 ~~~~iI~i~GppGSGKsT~a~~La~~~g 33 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQCEKLVKDYS 33 (196)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4678999999999999999999998763
No 55
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.97 E-value=0.0016 Score=57.19 Aligned_cols=26 Identities=27% Similarity=0.498 Sum_probs=22.6
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHH
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+++.+|.++|++|+||||+|+.++..
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~ 37 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVS 37 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 46789999999999999999988654
No 56
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.95 E-value=0.0019 Score=58.18 Aligned_cols=27 Identities=26% Similarity=0.445 Sum_probs=23.7
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
+.+|.++|.+|+||||+|+.+++....
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~ 28 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNF 28 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 457999999999999999999987654
No 57
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.93 E-value=0.0019 Score=56.06 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=20.6
Q ss_pred EEEEecCCchHHHHHHHHHHHhcc
Q 007268 178 LLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
|.+.|++|+||||+++.++.....
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~ 27 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGV 27 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 445599999999999999988753
No 58
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.89 E-value=0.011 Score=54.15 Aligned_cols=47 Identities=11% Similarity=0.063 Sum_probs=34.7
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCC----CCeEEEEEeCCCCChH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKL----FDQVVLSEVSESRDVR 220 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~----f~~~~wv~vs~~~~~~ 220 (610)
..+++.|+|.+|+|||+||.+++........ -..++|++........
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 83 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPV 83 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGG
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHH
Confidence 3479999999999999999998766433211 2468888877766543
No 59
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.86 E-value=0.002 Score=56.09 Aligned_cols=26 Identities=38% Similarity=0.556 Sum_probs=22.7
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
+.++|.|.|++|+||||+|+.+.+..
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~~l 28 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALANLP 28 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 45799999999999999999997654
No 60
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=95.85 E-value=0.0033 Score=59.17 Aligned_cols=39 Identities=23% Similarity=0.446 Sum_probs=30.6
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCC
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSES 216 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~ 216 (610)
+.|+|+|-||+||||+|..++....... ..+.-|++...
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G--~rVllID~D~q 40 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMG--KTIMVVGCDPK 40 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTT--CCEEEEEECTT
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhCC--CcEEEEecCCC
Confidence 6899999999999999999998887542 34666666543
No 61
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.81 E-value=0.0022 Score=55.41 Aligned_cols=23 Identities=35% Similarity=0.664 Sum_probs=21.2
Q ss_pred EEEEecCCchHHHHHHHHHHHhc
Q 007268 178 LLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
|.|.|++|+||||+++.++....
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~ 25 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLD 25 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 77889999999999999999875
No 62
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=95.76 E-value=0.0022 Score=55.98 Aligned_cols=25 Identities=28% Similarity=0.507 Sum_probs=22.0
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+.|.|.|++|+||||+|+.+++...
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg 27 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALG 27 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhC
Confidence 3467889999999999999998875
No 63
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=95.70 E-value=0.014 Score=55.90 Aligned_cols=70 Identities=13% Similarity=0.256 Sum_probs=43.0
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHhCCCe
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDVESESGRARILYDRLKKEER 255 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~~~kr 255 (610)
.++.++|++|+|||.||+.++.....+..| +-+..+.-.+ ..- ......+..+.+... ++
T Consensus 124 g~~l~~G~pG~GKT~la~ala~~~~~~~~~---~~~~~~~~~~--------------~~~-G~~e~~~~~~f~~a~--~~ 183 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGEALGGKDKY---ATVRFGEPLS--------------GYN-TDFNVFVDDIARAML--QH 183 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHHHHTTSCC---EEEEBSCSST--------------TCB-CCHHHHHHHHHHHHH--HC
T ss_pred ceEEEECCCCccHHHHHHHHHHHhcCCCCe---EEEEhhHhhh--------------ccc-chHHHHHHHHHHHHh--hc
Confidence 456678999999999999999987644233 2233333221 011 122334455555554 35
Q ss_pred EEEEEeCCCC
Q 007268 256 ILVILDNIWE 265 (610)
Q Consensus 256 ~LLVLDdv~~ 265 (610)
++|++|.++.
T Consensus 184 ~ilf~DEid~ 193 (321)
T d1w44a_ 184 RVIVIDSLKN 193 (321)
T ss_dssp SEEEEECCTT
T ss_pred cEEEeehhhh
Confidence 7999999964
No 64
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=95.61 E-value=0.004 Score=60.07 Aligned_cols=46 Identities=26% Similarity=0.408 Sum_probs=34.0
Q ss_pred CccccHHHHHHHHHHhc--------------CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 155 AFESRASILNEIMDALK--------------NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 155 ~~vGR~~~~~~L~~~L~--------------~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.++|.++.++.+...+. ...++.+.++|++|+|||.||+.+++...
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~ 74 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLAN 74 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccc
Confidence 35687777776654331 11346788999999999999999998753
No 65
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.60 E-value=0.0032 Score=57.21 Aligned_cols=26 Identities=35% Similarity=0.474 Sum_probs=24.1
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.++|+|.|++|+||||+|+.+++++.
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~g 28 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEALQ 28 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 46999999999999999999999986
No 66
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=95.60 E-value=0.0069 Score=57.57 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=36.4
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChH
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVR 220 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~ 220 (610)
++.+++|.+.|-||+||||+|..++.....+. ..+..|++....++.
T Consensus 5 ~~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G--~rVLlvD~Dp~~~l~ 51 (296)
T d1ihua1 5 QNIPPYLFFTGKGGVGKTSISCATAIRLAEQG--KRVLLVSTDPASNVG 51 (296)
T ss_dssp SSCCSEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCTTCCHH
T ss_pred CCCCeEEEEECCCcChHHHHHHHHHHHHHHCC--CCEEEEeCCCCCCHH
Confidence 45688999999999999999999988877652 356777776555544
No 67
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.58 E-value=0.0039 Score=54.89 Aligned_cols=27 Identities=26% Similarity=0.518 Sum_probs=24.3
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
++|.|.|++|+||||+++.+......+
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 688999999999999999999888654
No 68
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.54 E-value=0.0037 Score=55.58 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=23.3
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+.+|.|.|++|+||||+|+.+++...
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g 26 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYG 26 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 46899999999999999999998764
No 69
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=95.53 E-value=0.0034 Score=54.81 Aligned_cols=24 Identities=42% Similarity=0.696 Sum_probs=21.8
Q ss_pred EEEEecCCchHHHHHHHHHHHhcc
Q 007268 178 LLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
|+|+|++|+|||||++.+......
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEECCCCcHHHHHHHHHHhcCCC
Confidence 789999999999999999987654
No 70
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=95.52 E-value=0.01 Score=57.27 Aligned_cols=56 Identities=20% Similarity=0.251 Sum_probs=39.2
Q ss_pred HHHHHHHhc--CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCC
Q 007268 163 LNEIMDALK--NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRD 218 (610)
Q Consensus 163 ~~~L~~~L~--~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~ 218 (610)
..+|++.+. ..+..+|+|.|++|+|||||...+........+--.++=++.+.+++
T Consensus 37 ~~~~~~~~~~~~~~~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~ 94 (323)
T d2qm8a1 37 VRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRT 94 (323)
T ss_dssp HHHHHHHHGGGCCCSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSS
T ss_pred HHHHHHHhhhccCCceEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccccHHH
Confidence 344554443 56778999999999999999999998766543333556666555543
No 71
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=95.43 E-value=0.0056 Score=58.27 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=30.1
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCC
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESR 217 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~ 217 (610)
+.|+|+|-||+||||+|..++...... -..+.-|++....
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA~~--G~rVLlID~DpQ~ 42 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALAEM--GKKVMIVGCDPKA 42 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHT--TCCEEEEEECSSS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEecCCCC
Confidence 678899999999999999988877654 2246666665443
No 72
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.43 E-value=0.0063 Score=54.90 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=26.4
Q ss_pred hcCCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 170 LKNPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 170 L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+...+..+|.+.|++|+||||||+.+.....
T Consensus 19 ~~~~kg~vIwltGlsGsGKTTia~~L~~~l~ 49 (208)
T d1m7ga_ 19 LRNQRGLTIWLTGLSASGKSTLAVELEHQLV 49 (208)
T ss_dssp HHTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HhCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3356778999999999999999999987764
No 73
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.32 E-value=0.047 Score=51.89 Aligned_cols=45 Identities=18% Similarity=0.062 Sum_probs=32.1
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCC
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESR 217 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~ 217 (610)
..+-+|+|.|..|+||||+|+.+.........-..+.-++...-.
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~ 122 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFL 122 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGB
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeE
Confidence 356799999999999999999999887643112235555555443
No 74
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=95.26 E-value=0.014 Score=56.45 Aligned_cols=61 Identities=23% Similarity=0.226 Sum_probs=35.9
Q ss_pred HHHHHHhc--CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHH
Q 007268 164 NEIMDALK--NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQG 224 (610)
Q Consensus 164 ~~L~~~L~--~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~ 224 (610)
.++++.+. .++..+|+|+|++|+|||||...+......+.+--+++=++.+.+.+-..++.
T Consensus 41 ~~ll~~~~~~~~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailg 103 (327)
T d2p67a1 41 TQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILG 103 (327)
T ss_dssp HHHHHHHGGGCSCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC----------
T ss_pred HHHHHHhhhccCCceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeeecccccc
Confidence 34444443 46789999999999999999999988777653322444455455544433443
No 75
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.24 E-value=0.031 Score=52.03 Aligned_cols=100 Identities=19% Similarity=0.303 Sum_probs=62.4
Q ss_pred HHHHHhcC-CCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCC-ChHHHHHHHHHhhCC--C-------
Q 007268 165 EIMDALKN-PNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESR-DVRKIQGEIADKLGL--K------- 233 (610)
Q Consensus 165 ~L~~~L~~-~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~-~~~~~~~~i~~~l~~--~------- 233 (610)
+.++.+.. .+...++|.|.+|+|||+|+..+.+..... +-+.++++-+++.. ...++.+++.+.--. .
T Consensus 57 raID~l~pigkGQr~~If~~~g~GKt~l~~~i~~~~~~~-~~~v~V~~~iGer~~ev~~~~~~~~~~~~~~~~~~~~~tv 135 (276)
T d2jdid3 57 KVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKA-HGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVA 135 (276)
T ss_dssp HHHHHHSCEETTCEEEEEECTTSSHHHHHHHHHHHHTTT-CSSEEEEEEESCCHHHHHHHHHHHHHHTSSCSSSSCCCEE
T ss_pred eeeeeeccccCCCEEEeeCCCCCCHHHHHHHHHHHHHhh-CCCeEEEEEeccChHHHHHHHHHHHhcCccccccccceEE
Confidence 34555541 233469999999999999999999875432 24577888887664 456677777653111 0
Q ss_pred ----CCCCChhHH------HHHHHHHHh--CCCeEEEEEeCCCC
Q 007268 234 ----FDVESESGR------ARILYDRLK--KEERILVILDNIWE 265 (610)
Q Consensus 234 ----~~~~~~~~~------~~~l~~~L~--~~kr~LLVLDdv~~ 265 (610)
...++.... .-.+.+++. +++.+|+++||+..
T Consensus 136 vv~~~s~~~~~~r~~~~~~a~~iAEyf~~~~G~~VLv~~Dsltr 179 (276)
T d2jdid3 136 LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 179 (276)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECTHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEcchhH
Confidence 011121111 224556665 38999999999843
No 76
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.14 E-value=0.0062 Score=55.02 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=23.9
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
+-+|+|.|..|+||||+|+.+......
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~ 28 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQ 28 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhch
Confidence 458999999999999999999988654
No 77
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.13 E-value=0.0061 Score=54.17 Aligned_cols=27 Identities=26% Similarity=0.441 Sum_probs=24.0
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+.++|.|.|++|+||||+|+.++....
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~~~g 33 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQKYG 33 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHTC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 457999999999999999999998754
No 78
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=95.12 E-value=0.023 Score=53.36 Aligned_cols=97 Identities=20% Similarity=0.169 Sum_probs=54.1
Q ss_pred HHHHHhc-CCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEE-EeCCCCChHHHHHHHHHhhCC----CCCCCC
Q 007268 165 EIMDALK-NPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLS-EVSESRDVRKIQGEIADKLGL----KFDVES 238 (610)
Q Consensus 165 ~L~~~L~-~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv-~vs~~~~~~~~~~~i~~~l~~----~~~~~~ 238 (610)
++++.+. =.+...++|.|..|+|||+|+.++.+.....+ -.+++.+ .+.+... + ..++...... .....+
T Consensus 32 r~ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~~~~-~~~v~~~~~iger~~--e-v~~~~~~~~~~vv~~t~d~~ 107 (289)
T d1xpua3 32 RVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNH-PDCVLMVLLIDERPE--E-VTEMQRLVKGEVVASTFDEP 107 (289)
T ss_dssp HHHHHHSCCBTTCEEEEEECSSSSHHHHHHHHHHHHHHHC-TTSEEEEEEEEECHH--H-HHHHHHHCSSEEEEEETTSC
T ss_pred eeeeecccccCCCeeeEeCCCCCCHHHHHHHHHHHHhhcC-CCeEEEEEeeceeHH--H-HHhHHhhcceEEEeccCCCc
Confidence 4666665 23456899999999999999999998766432 3333333 3333221 1 1222222211 111111
Q ss_pred hh------HHHHHHHHHHh-CCCeEEEEEeCCCC
Q 007268 239 ES------GRARILYDRLK-KEERILVILDNIWE 265 (610)
Q Consensus 239 ~~------~~~~~l~~~L~-~~kr~LLVLDdv~~ 265 (610)
.. .....+.+++. +++.+||++||+-.
T Consensus 108 ~~~r~~~~~~a~~iAEyfrd~G~dVLli~Dsltr 141 (289)
T d1xpua3 108 ASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITR 141 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEESCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCceeecCcHHH
Confidence 11 12234455554 47999999999843
No 79
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=95.10 E-value=0.0056 Score=54.20 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=22.6
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+..|.|.|++|+||||+|+.+++...
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~ 28 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQ 28 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHC
Confidence 44578999999999999999998874
No 80
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=95.05 E-value=0.0053 Score=59.79 Aligned_cols=47 Identities=19% Similarity=0.388 Sum_probs=35.4
Q ss_pred CCcCccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHH
Q 007268 152 DYEAFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 152 ~~~~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+...++|.+..+..|.-.+...+.+-|.|.|.+|+|||+||+.+..-
T Consensus 5 ~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~i 51 (333)
T d1g8pa_ 5 PFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAAL 51 (333)
T ss_dssp CGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHH
T ss_pred ChhhccCcHHHHHHHHHHHhccCCCeEEEECCCCccHHHHHHHHHHh
Confidence 45678999987776553333334456899999999999999999864
No 81
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=94.95 E-value=0.0066 Score=55.10 Aligned_cols=25 Identities=32% Similarity=0.361 Sum_probs=22.7
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
-+|+|-|++|+||||+|+.++..+.
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~lg 28 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDFG 28 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3688999999999999999999876
No 82
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.84 E-value=0.007 Score=52.95 Aligned_cols=23 Identities=35% Similarity=0.546 Sum_probs=21.0
Q ss_pred EEEEecCCchHHHHHHHHHHHhc
Q 007268 178 LLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
|.|.|++|+||||+|+.++....
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~~ 25 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAYG 25 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 77999999999999999998864
No 83
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.64 E-value=0.0085 Score=52.48 Aligned_cols=24 Identities=42% Similarity=0.481 Sum_probs=21.5
Q ss_pred EEEEEecCCchHHHHHHHHHHHhc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.|.|.|++|+||||+|+.+++...
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g 25 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLG 25 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Confidence 477889999999999999998874
No 84
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.63 E-value=0.0075 Score=53.49 Aligned_cols=25 Identities=36% Similarity=0.525 Sum_probs=21.8
Q ss_pred EEEEEecCCchHHHHHHHHHHHhcc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
.|+|+|++|+|||||++.+......
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~ 26 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSS 26 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCC
Confidence 4779999999999999999987653
No 85
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.60 E-value=0.008 Score=53.09 Aligned_cols=26 Identities=35% Similarity=0.464 Sum_probs=22.5
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
+.|+|+|++|+|||||++.+++....
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~ 27 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPD 27 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCc
Confidence 45889999999999999999887653
No 86
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=94.59 E-value=0.0088 Score=52.46 Aligned_cols=24 Identities=29% Similarity=0.523 Sum_probs=21.5
Q ss_pred EEEEEecCCchHHHHHHHHHHHhc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.|.|.|++|+||||+|+.++....
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g 25 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYG 25 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Confidence 377899999999999999999874
No 87
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.57 E-value=0.0093 Score=52.34 Aligned_cols=25 Identities=16% Similarity=0.444 Sum_probs=22.3
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
++|.|+|++|+|||||++.+..+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 5889999999999999999987754
No 88
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=94.55 E-value=0.011 Score=52.32 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=21.8
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.-.|.|.|++|+||||+|+.++....
T Consensus 6 ~mrIiliG~PGSGKtT~a~~La~~~g 31 (189)
T d2ak3a1 6 LLRAAIMGAPGSGKGTVSSRITKHFE 31 (189)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHBC
T ss_pred ceeEEEECCCCCCHHHHHHHHHHHHC
Confidence 34566789999999999999998753
No 89
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=94.41 E-value=0.012 Score=51.81 Aligned_cols=26 Identities=35% Similarity=0.429 Sum_probs=21.5
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+.++| |.|++|+||||+|+.++....
T Consensus 3 ~~rii-l~G~pGSGKsT~a~~La~~~g 28 (190)
T d1ak2a1 3 GVRAV-LLGPPGAGKGTQAPKLAKNFC 28 (190)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHHHHT
T ss_pred ccEEE-EECCCCCCHHHHHHHHHHHhC
Confidence 34555 789999999999999998764
No 90
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.40 E-value=0.041 Score=50.41 Aligned_cols=56 Identities=25% Similarity=0.290 Sum_probs=39.3
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccC----CCCCeEEEEEeCCCCChHHHHHHHHHhh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESD----KLFDQVVLSEVSESRDVRKIQGEIADKL 230 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~----~~f~~~~wv~vs~~~~~~~~~~~i~~~l 230 (610)
..+++.|+|.+|+|||++|.+++.....+ ......+|+..........+ +......
T Consensus 35 ~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 94 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERI-REIAQNR 94 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHH-HHHHHTT
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEeccchhHHHHH-HHHHHhc
Confidence 35799999999999999999998776432 12356788888777665433 3343333
No 91
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.24 E-value=0.012 Score=51.53 Aligned_cols=23 Identities=26% Similarity=0.437 Sum_probs=20.1
Q ss_pred EEEEecCCchHHHHHHHHHHHhc
Q 007268 178 LLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
|.|.|++|+||||+|+.++....
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~g 27 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERFH 27 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 55779999999999999998764
No 92
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.23 E-value=0.048 Score=51.15 Aligned_cols=80 Identities=6% Similarity=0.009 Sum_probs=47.4
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCC-CeEEEEEeCCCCChHHHHHHHHHhhCC-------CCCCCChhHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLF-DQVVLSEVSESRDVRKIQGEIADKLGL-------KFDVESESGRARI 245 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f-~~~~wv~vs~~~~~~~~~~~i~~~l~~-------~~~~~~~~~~~~~ 245 (610)
.+-+|+|.|..|+||||||..+......+... ..+..++...-.-..+-...+.+.... ..++.-+...+..
T Consensus 26 ~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~~ll~~ 105 (286)
T d1odfa_ 26 CPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQE 105 (286)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCHHHHHH
T ss_pred CCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCCCCHHHHHHHhhhccccccceecCCCcchhHHHHHH
Confidence 35689999999999999999887765443212 245566665543333333444444321 1233444566667
Q ss_pred HHHHHhCC
Q 007268 246 LYDRLKKE 253 (610)
Q Consensus 246 l~~~L~~~ 253 (610)
....|.++
T Consensus 106 ~l~~l~~~ 113 (286)
T d1odfa_ 106 VLNTIFNN 113 (286)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHhh
Confidence 77777643
No 93
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.20 E-value=0.013 Score=51.20 Aligned_cols=24 Identities=25% Similarity=0.281 Sum_probs=21.1
Q ss_pred EEEEEecCCchHHHHHHHHHHHhc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.|.|.|++|+||||+|+.++....
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~ 25 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYG 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 367899999999999999998764
No 94
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.09 E-value=0.014 Score=51.08 Aligned_cols=26 Identities=19% Similarity=0.492 Sum_probs=22.7
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
+.|.|+|++|+|||||++.+..+...
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~~ 29 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPD 29 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCCc
Confidence 67999999999999999999877543
No 95
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=93.87 E-value=0.016 Score=51.14 Aligned_cols=23 Identities=30% Similarity=0.306 Sum_probs=20.0
Q ss_pred CceEEEEEecCCchHHHHHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVA 196 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~ 196 (610)
.+-+|+|+|..|+||||+|..+-
T Consensus 2 ~p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
Confidence 35689999999999999998773
No 96
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.86 E-value=0.038 Score=49.49 Aligned_cols=28 Identities=18% Similarity=0.336 Sum_probs=24.8
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
...|+|.|+.|+||||+++.+.+....+
T Consensus 3 G~lI~ieG~dGsGKsT~~~~L~~~L~~~ 30 (209)
T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVEALCAA 30 (209)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHT
T ss_pred eeEEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 3679999999999999999999987764
No 97
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.61 E-value=0.02 Score=51.26 Aligned_cols=26 Identities=15% Similarity=0.361 Sum_probs=22.9
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
..++.|+|++|+|||||.+.+.....
T Consensus 2 G~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 2 GTLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCC
Confidence 36889999999999999999988754
No 98
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.50 E-value=0.022 Score=52.14 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=24.8
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
+++.|+|-|.-|+||||+++.+.+....
T Consensus 1 ~pk~IviEG~~GsGKST~~~~L~~~l~~ 28 (241)
T d2ocpa1 1 GPRRLSIEGNIAVGKSTFVKLLTKTYPE 28 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHCTT
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHhh
Confidence 4689999999999999999999987653
No 99
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=93.44 E-value=0.07 Score=48.06 Aligned_cols=41 Identities=20% Similarity=0.155 Sum_probs=28.4
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCC
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSE 215 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~ 215 (610)
...++.|.|.+|+|||+||.+++....... -..++|++...
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~-~~~~~~~s~e~ 65 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEF-DEPGVFVTFEE 65 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHH-CCCEEEEESSS
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhc-CCCcccccccC
Confidence 457999999999999999988765432211 22466666544
No 100
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.43 E-value=0.013 Score=51.80 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=23.0
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHh
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
.++-+|+|-|..|+||||+++.+.+..
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGT
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHh
Confidence 455689999999999999999987654
No 101
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=93.39 E-value=0.024 Score=51.69 Aligned_cols=25 Identities=36% Similarity=0.573 Sum_probs=22.1
Q ss_pred EEEEEecCCchHHHHHHHHHHHhcc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
||+|.|+.|+|||||...+.+....
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~~ 26 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLED 26 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTT
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHhh
Confidence 7899999999999999999876543
No 102
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.30 E-value=0.083 Score=48.16 Aligned_cols=47 Identities=13% Similarity=0.154 Sum_probs=36.0
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhcc----CCCCCeEEEEEeCCCCChH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAES----DKLFDQVVLSEVSESRDVR 220 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~----~~~f~~~~wv~vs~~~~~~ 220 (610)
..+++.|+|.+|+|||++|.+++..... ...+..+.|+.........
T Consensus 36 ~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (258)
T d1v5wa_ 36 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPD 86 (258)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHH
Confidence 4579999999999999999999876432 2235578888877776544
No 103
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.27 E-value=0.065 Score=48.08 Aligned_cols=28 Identities=29% Similarity=0.423 Sum_probs=24.7
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
+.+.|+|-|+-|+||||+++.+.+....
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 4578999999999999999999988764
No 104
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=93.27 E-value=0.053 Score=49.90 Aligned_cols=46 Identities=22% Similarity=0.419 Sum_probs=34.2
Q ss_pred CccccHHHHHHHHHHhc--CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 155 AFESRASILNEIMDALK--NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 155 ~~vGR~~~~~~L~~~L~--~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.|||....++++.+.+. .....-|.|.|..|+|||++|+.+.....
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~ 48 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSD 48 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHST
T ss_pred CeEecCHHHHHHHHHHHHHhCCCCCEEEECCCCcCHHHHHHHHHHhcC
Confidence 47888777877777665 22223478999999999999999976543
No 105
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=93.19 E-value=0.046 Score=53.33 Aligned_cols=30 Identities=30% Similarity=0.264 Sum_probs=26.3
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
.+..+.+.++|++|+|||++|..+++....
T Consensus 151 ~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~ 180 (362)
T d1svma_ 151 IPKKRYWLFKGPIDSGKTTLAAALLELCGG 180 (362)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHCC
T ss_pred CCCcCeEEEECCCCCCHHHHHHHHHHHcCC
Confidence 456679999999999999999999998764
No 106
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.12 E-value=0.047 Score=49.38 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=30.7
Q ss_pred eEEEEE-ecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCC
Q 007268 176 NMLLIY-GMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSE 215 (610)
Q Consensus 176 ~vv~I~-G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~ 215 (610)
++|+|+ |-||+||||+|..++...... -..+.+|++..
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~--g~~VlliD~D~ 40 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQL--GHDVTIVDADI 40 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHT--TCCEEEEECCC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 678887 899999999999999887754 34688887753
No 107
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.98 E-value=0.041 Score=48.88 Aligned_cols=26 Identities=31% Similarity=0.524 Sum_probs=23.1
Q ss_pred EEEEEecCCchHHHHHHHHHHHhccC
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
.|+|-|.-|+||||+++.+.+....+
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~~~ 27 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFRAA 27 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 58999999999999999999887654
No 108
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.96 E-value=0.08 Score=47.10 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=27.5
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEE
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLS 211 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv 211 (610)
.+.|+|-|+.|+||||+++.+.+...... +..+.+.
T Consensus 2 gkfIviEG~dGsGKsT~~~~L~~~L~~~g-~~~~~~~ 37 (210)
T d4tmka_ 2 SKYIVIEGLEGAGKTTARNVVVETLEQLG-IRDMVFT 37 (210)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHhCC-CCeEEEe
Confidence 35789999999999999999998876542 3444443
No 109
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=92.87 E-value=0.028 Score=47.40 Aligned_cols=22 Identities=32% Similarity=0.501 Sum_probs=19.6
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.|+|.+|+|||||...+....
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6799999999999999987664
No 110
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=92.83 E-value=0.13 Score=47.74 Aligned_cols=88 Identities=16% Similarity=0.200 Sum_probs=52.0
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCC-hHHHHHHHHHhhCCC-------CCCCChh------H
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRD-VRKIQGEIADKLGLK-------FDVESES------G 241 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~-~~~~~~~i~~~l~~~-------~~~~~~~------~ 241 (610)
..++|.|.+|+|||+|+......... ....++++-+..... ..++..++...=... ...++.. .
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~~~~--~~~v~V~~~iGer~~Ev~e~~~~~~~~~~~~~tvvv~~tsd~p~~~r~~a~~ 145 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILNQQG--QNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPY 145 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHTCCT--TTCEEEEEEESCCHHHHHHHHHHTGGGTGGGSEEEEEECTTSCGGGTTHHHH
T ss_pred ceEeeccCCCCChHHHHHHHHhhhcc--cCceeeeeeecchhHHHHHHHHhhccCCcceeeeecccccCccHHHHHHHHH
Confidence 45889999999999999987655443 245677777766543 334444443321110 1111111 2
Q ss_pred HHHHHHHHHh-CCCeEEEEEeCCCC
Q 007268 242 RARILYDRLK-KEERILVILDNIWE 265 (610)
Q Consensus 242 ~~~~l~~~L~-~~kr~LLVLDdv~~ 265 (610)
....+.+++. ++++.|+++||+-.
T Consensus 146 ~a~tiAEyfrd~G~~Vlll~Dsltr 170 (276)
T d1fx0a3 146 TGAALAEYFMYRERHTLIIYDDLSK 170 (276)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECHHH
T ss_pred HHHHHHHHHHHcCCceeEEeeccHH
Confidence 2334555554 47899999999843
No 111
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=92.66 E-value=0.31 Score=45.00 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=36.3
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhh
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKL 230 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l 230 (610)
..++.|.|.+|+|||+++.+++.+......+ .+++++.. .+..++...++...
T Consensus 35 G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~-~v~~~s~E--~~~~~~~~r~~~~~ 87 (277)
T d1cr2a_ 35 GEVIMVTSGSGMGKSTFVRQQALQWGTAMGK-KVGLAMLE--ESVEETAEDLIGLH 87 (277)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHHHHHHTSCC-CEEEEESS--SCHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHhhhhhccc-ceeEeeec--cchhhHHhHHHHHh
Confidence 3588999999999999999998775443223 45555554 44566666665443
No 112
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.51 E-value=0.14 Score=45.17 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=31.9
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCC----CCeEEEEEeCCCCCh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKL----FDQVVLSEVSESRDV 219 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~----f~~~~wv~vs~~~~~ 219 (610)
...++.|.|++|+|||+||.+++........ +....++........
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRP 71 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCH
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHHhhccccccceehhhhhhhhhHH
Confidence 3479999999999999999999877554322 234555555544443
No 113
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=92.28 E-value=0.12 Score=46.83 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=38.0
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCC--------------CCeEEEEEeCCCCChHHHHHHHHHhhC
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKL--------------FDQVVLSEVSESRDVRKIQGEIADKLG 231 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~--------------f~~~~wv~vs~~~~~~~~~~~i~~~l~ 231 (610)
...++.|.|.+|+|||++|.+++........ ...+.|++........ ....+...+.
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~~~-~~~~~~~~~~ 103 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPE-RIMQMAEHAG 103 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTTSCTTTTSSEEEEEEESSSCCCHH-HHHHHHHHHT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHhcCCCceEEeecccchhcCceEEEEEecCCcCHH-HHHHHHhhcc
Confidence 3479999999999999999999877643211 1246788776555533 3344444443
No 114
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=92.07 E-value=0.022 Score=53.48 Aligned_cols=28 Identities=14% Similarity=0.283 Sum_probs=21.4
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
+..+|+|.|.+|+||||+|+.+.+....
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~i~~~ 30 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQIFRR 30 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHhh
Confidence 4579999999999999999998887654
No 115
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=92.06 E-value=0.056 Score=46.58 Aligned_cols=25 Identities=28% Similarity=0.441 Sum_probs=20.4
Q ss_pred CCceEEEEEecCCchHHHHHHHHHH
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
++..-|+|+|.+|+|||||...+..
T Consensus 11 ~k~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 11 KKTGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp TCCEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhC
Confidence 3445688999999999999988754
No 116
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=92.05 E-value=0.034 Score=47.16 Aligned_cols=23 Identities=35% Similarity=0.579 Sum_probs=20.2
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|+|+|.+|+|||||...+....
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 37899999999999999998764
No 117
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=91.89 E-value=0.13 Score=43.34 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=25.9
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
.+.-+|.+.|.=|+||||+++.+++.....
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 344689999999999999999999987654
No 118
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=91.89 E-value=0.067 Score=52.20 Aligned_cols=26 Identities=31% Similarity=0.498 Sum_probs=22.5
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
....+...|+.|+|||.||+.++...
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~~~ 92 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAKHL 92 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcceeeeCCCCccHHHHHHHHHhhc
Confidence 45668899999999999999998764
No 119
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=91.88 E-value=0.04 Score=50.27 Aligned_cols=25 Identities=28% Similarity=0.450 Sum_probs=22.0
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHh
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
..+++|+|+.|+|||||++.++.-.
T Consensus 29 Ge~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 29 GEFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CCEEEEECCCCChHHHHHHHHhcCC
Confidence 4689999999999999999997654
No 120
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=91.88 E-value=0.094 Score=47.31 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=29.8
Q ss_pred eEEEEE-ecCCchHHHHHHHHHHHhccCCCCCeEEEEEeC
Q 007268 176 NMLLIY-GMGGIGKTTLAKKVARKAESDKLFDQVVLSEVS 214 (610)
Q Consensus 176 ~vv~I~-G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs 214 (610)
++|+|+ +-||+||||+|..++...... -..++.++..
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~~--g~~VlliD~D 40 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGDR--GRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHT--TCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhC--CCCEEEEeCC
Confidence 688888 789999999999999887754 3357777765
No 121
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=91.79 E-value=0.041 Score=50.26 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=22.8
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...+++|.|+.|+|||||++.++.-..
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 30 AGQIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp SSCEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHcCCcc
Confidence 346899999999999999999876543
No 122
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=91.78 E-value=0.047 Score=49.52 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=22.3
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
...+++|.|+.|+|||||.+.++.-.
T Consensus 25 ~Gei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 25 EGEFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCC
Confidence 34689999999999999999987654
No 123
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=91.76 E-value=0.077 Score=45.47 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHH
Q 007268 163 LNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 163 ~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+..+..++.... --|.|+|.+|+|||||...+...
T Consensus 4 ~~~~~~~~~~k~-~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 4 FTRIWRLFNHQE-HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHHHTTSC-EEEEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHHHhCCCe-EEEEEECCCCCCHHHHHHHHhcC
Confidence 345565555444 45779999999999999988754
No 124
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.72 E-value=0.041 Score=49.91 Aligned_cols=26 Identities=23% Similarity=0.336 Sum_probs=21.9
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
...+++|+|+.|+|||||.+.++.-.
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCcchhhHhccCCC
Confidence 34689999999999999999876543
No 125
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.71 E-value=0.023 Score=51.87 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=22.9
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.+.|+|-|+.|+||||+|+.+.+...
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 47899999999999999999887653
No 126
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=91.71 E-value=0.029 Score=49.97 Aligned_cols=27 Identities=37% Similarity=0.476 Sum_probs=22.8
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+..+++|+|+.|+|||||.+.++....
T Consensus 26 ~Gei~~l~G~NGsGKSTLl~~i~gl~~ 52 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLLKTISTYLK 52 (200)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcccc
Confidence 346899999999999999999976543
No 127
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=91.65 E-value=0.053 Score=47.63 Aligned_cols=25 Identities=12% Similarity=0.333 Sum_probs=21.9
Q ss_pred CCceEEEEEecCCchHHHHHHHHHH
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
++.+.|+|+|.+|+|||||...+.+
T Consensus 21 ~~~~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 21 GGLPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp SCCCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHhcC
Confidence 3456799999999999999999975
No 128
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=91.59 E-value=0.048 Score=50.31 Aligned_cols=27 Identities=26% Similarity=0.391 Sum_probs=22.7
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...+++|+|+.|+|||||++.+..-..
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~~ 66 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFYD 66 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcccC
Confidence 346899999999999999999975443
No 129
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.54 E-value=0.047 Score=46.48 Aligned_cols=22 Identities=23% Similarity=0.468 Sum_probs=19.8
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.++|.+|+|||||+..+.+..
T Consensus 5 v~liG~~~vGKTsLl~~~~~~~ 26 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAGR 26 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7799999999999999998753
No 130
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.53 E-value=0.047 Score=46.51 Aligned_cols=21 Identities=19% Similarity=0.654 Sum_probs=19.0
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|+++|.+|+|||||+..+.+.
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999998864
No 131
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.52 E-value=0.043 Score=46.92 Aligned_cols=22 Identities=32% Similarity=0.539 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||+|+..+.+..
T Consensus 7 ivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7789999999999999988753
No 132
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.52 E-value=0.042 Score=47.38 Aligned_cols=22 Identities=32% Similarity=0.520 Sum_probs=19.4
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.|+|.+|+|||+|+..+.+..
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDKR 27 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHhcCC
Confidence 6789999999999999987653
No 133
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=91.50 E-value=0.044 Score=50.15 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=22.9
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
....++|+|..|+|||||++.+..-..
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 346899999999999999999976543
No 134
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=91.41 E-value=0.054 Score=49.31 Aligned_cols=27 Identities=33% Similarity=0.491 Sum_probs=22.9
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...+++|+|+.|+|||||.+.+..-..
T Consensus 31 ~Ge~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCChHHHHHHHHHcCCC
Confidence 346899999999999999999876543
No 135
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.40 E-value=0.26 Score=45.80 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=55.3
Q ss_pred HHHHhc-CCCceEEEEEecCCchHHHHHHHHHHHhccCC-----CC-CeEEEEEeCCCC-ChHHHHHHHHHhhCCC----
Q 007268 166 IMDALK-NPNVNMLLIYGMGGIGKTTLAKKVARKAESDK-----LF-DQVVLSEVSESR-DVRKIQGEIADKLGLK---- 233 (610)
Q Consensus 166 L~~~L~-~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~-----~f-~~~~wv~vs~~~-~~~~~~~~i~~~l~~~---- 233 (610)
.++.|. =.+...++|.|.+|+|||+|+..+.......+ .- ..++++-++... ...++...+...-..+
T Consensus 58 aID~l~pig~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGer~~E~~e~~~~~~~~~~~~~tvv 137 (285)
T d2jdia3 58 AVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIV 137 (285)
T ss_dssp HHHHHSCCBTTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred EEecccCccCCCEEEeecCCCCChHHHHHHHHHhHHhhccccccccceEEEEeeeCccHHHHHHHHHHhcccccccceEE
Confidence 444444 23345688999999999999988876543211 11 145566666554 3455555554432211
Q ss_pred ---CCCCChhHH------HHHHHHHHh-CCCeEEEEEeCCCC
Q 007268 234 ---FDVESESGR------ARILYDRLK-KEERILVILDNIWE 265 (610)
Q Consensus 234 ---~~~~~~~~~------~~~l~~~L~-~~kr~LLVLDdv~~ 265 (610)
...++.... ...+.+++. +++.+|+++||+-.
T Consensus 138 v~~ts~~~~~~r~~~~~~a~tiAEyfrd~G~~VLll~Dsltr 179 (285)
T d2jdia3 138 VSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSK 179 (285)
T ss_dssp EEECTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEETHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHcCCcEEEEEcChHH
Confidence 111221111 123444443 48999999999843
No 136
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=91.40 E-value=0.054 Score=49.63 Aligned_cols=26 Identities=23% Similarity=0.267 Sum_probs=22.5
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
....++|+|+.|+|||||++.+..-.
T Consensus 27 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 45789999999999999999997544
No 137
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=91.32 E-value=0.049 Score=49.27 Aligned_cols=25 Identities=32% Similarity=0.547 Sum_probs=22.3
Q ss_pred CceEEEEEecCCchHHHHHHHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+.++..|.|+-|+|||||.+.+.+.
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCEEEEeeCCCCCHHHHHHHHHhc
Confidence 5689999999999999999988764
No 138
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.29 E-value=0.057 Score=50.68 Aligned_cols=27 Identities=37% Similarity=0.422 Sum_probs=23.2
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...+++|+|+.|+|||||++.++....
T Consensus 61 ~Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCChHHHHHHHHhCCCc
Confidence 446899999999999999999986544
No 139
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.27 E-value=0.053 Score=49.96 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=22.9
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
....++|+|+.|+|||||++.+..-..
T Consensus 39 ~Ge~vaivG~sGsGKSTLl~li~gl~~ 65 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKSTVAALLQNLYQ 65 (251)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcccC
Confidence 446899999999999999999876543
No 140
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=91.23 E-value=0.048 Score=49.32 Aligned_cols=27 Identities=26% Similarity=0.303 Sum_probs=23.0
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...+++|.|+.|+|||||.+.+..-..
T Consensus 25 ~Ge~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 25 SGEYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp TTCEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCcC
Confidence 346899999999999999999987543
No 141
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.23 E-value=0.052 Score=49.40 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=25.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEE
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLS 211 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv 211 (610)
.+++|.|+.|+|||||.+.++.-... -.+.+|+
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~~p---~~G~I~~ 57 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIVKP---DRGEVRL 57 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSCC---SEEEEEE
T ss_pred EEEEEECCCCChHHHHHHHHHcCCCC---CceEEEE
Confidence 47889999999999999999876542 2355554
No 142
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.08 E-value=0.05 Score=46.48 Aligned_cols=23 Identities=26% Similarity=0.618 Sum_probs=20.1
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.|+|.+|+|||+|+..+.+..
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 37889999999999999998753
No 143
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.05 E-value=0.058 Score=46.29 Aligned_cols=23 Identities=26% Similarity=0.596 Sum_probs=20.0
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.|+|.+|+|||||...+.+..
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 37899999999999999998753
No 144
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.01 E-value=0.059 Score=45.79 Aligned_cols=22 Identities=27% Similarity=0.499 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||+|+..+.+..
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999999988653
No 145
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.96 E-value=0.057 Score=46.10 Aligned_cols=23 Identities=26% Similarity=0.523 Sum_probs=19.8
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.|+|.+|+|||+|+..+....
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCENK 27 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 36899999999999999988643
No 146
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=90.95 E-value=0.053 Score=50.15 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=22.3
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
...+++|+|+.|+|||||++.+..-.
T Consensus 27 ~GEi~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 27 AGDVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHcCc
Confidence 34699999999999999999997543
No 147
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=90.88 E-value=0.055 Score=48.29 Aligned_cols=20 Identities=35% Similarity=0.473 Sum_probs=18.0
Q ss_pred EEEEEecCCchHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVA 196 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~ 196 (610)
+|+|+|..|+||||+|+.+.
T Consensus 5 iIgitG~igSGKStv~~~l~ 24 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA 24 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH
T ss_pred EEEEECCCcCCHHHHHHHHH
Confidence 89999999999999998653
No 148
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.75 E-value=0.064 Score=46.15 Aligned_cols=23 Identities=30% Similarity=0.586 Sum_probs=20.1
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.|+|.+|+|||+|+..+.+..
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~~ 30 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQSY 30 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 47799999999999999988653
No 149
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.73 E-value=0.063 Score=45.98 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=19.2
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|.++|.+|+|||||...+.+.
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 789999999999999998765
No 150
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.72 E-value=0.063 Score=45.95 Aligned_cols=22 Identities=36% Similarity=0.687 Sum_probs=19.7
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.++|.+|+|||+|...+.+..
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 6789999999999999998754
No 151
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.71 E-value=0.063 Score=45.83 Aligned_cols=22 Identities=18% Similarity=0.480 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||||...+.+..
T Consensus 7 i~lvG~~~vGKTsli~rl~~~~ 28 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVEDS 28 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6788999999999999998754
No 152
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.65 E-value=0.064 Score=45.92 Aligned_cols=22 Identities=23% Similarity=0.551 Sum_probs=19.6
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.|+|.+|+|||+|+..+.+..
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6899999999999999988654
No 153
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.61 E-value=0.067 Score=45.54 Aligned_cols=22 Identities=27% Similarity=0.575 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.++|.+|+|||||+..+....
T Consensus 5 i~vvG~~~vGKTSli~~l~~~~ 26 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVEDK 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7799999999999999987653
No 154
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=90.57 E-value=0.059 Score=45.82 Aligned_cols=22 Identities=41% Similarity=0.617 Sum_probs=19.0
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|+|.+|+|||||...+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 3779999999999999998654
No 155
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.56 E-value=0.069 Score=47.23 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=20.8
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+.|+|+|.+|+|||||...+.+.
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47899999999999999999865
No 156
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.51 E-value=0.056 Score=46.31 Aligned_cols=21 Identities=29% Similarity=0.798 Sum_probs=18.7
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|+|+|.+|+|||||...+...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 678999999999999998764
No 157
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.51 E-value=0.067 Score=45.97 Aligned_cols=23 Identities=30% Similarity=0.590 Sum_probs=19.8
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|+|+|.+|+|||||...+.+..
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~~ 26 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVNDK 26 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHcCC
Confidence 37899999999999999987643
No 158
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=90.46 E-value=0.064 Score=47.72 Aligned_cols=20 Identities=35% Similarity=0.361 Sum_probs=18.2
Q ss_pred eEEEEEecCCchHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKV 195 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v 195 (610)
-+|+|+|..|+||||+|+.+
T Consensus 3 ~iIgITG~igSGKStv~~~l 22 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLF 22 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999866
No 159
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.46 E-value=0.07 Score=46.45 Aligned_cols=23 Identities=35% Similarity=0.531 Sum_probs=19.6
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.++|.+|+|||+|..++....
T Consensus 4 KivllG~~~vGKTsl~~r~~~~~ 26 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIH 26 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhhCC
Confidence 36889999999999999887654
No 160
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.44 E-value=0.071 Score=45.69 Aligned_cols=23 Identities=30% Similarity=0.582 Sum_probs=20.1
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|+|+|.+|+|||+|...+....
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~~ 29 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQSY 29 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 37889999999999999988753
No 161
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.39 E-value=0.081 Score=45.07 Aligned_cols=25 Identities=20% Similarity=0.381 Sum_probs=20.9
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHh
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
..-|+|+|.+|+|||+|...+.+..
T Consensus 4 ~~Kv~liG~~~vGKTsLl~~~~~~~ 28 (167)
T d1xtqa1 4 SRKIAILGYRSVGKSSLTIQFVEGQ 28 (167)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHSC
T ss_pred ceEEEEECCCCcCHHHHHHHHHhCC
Confidence 3457889999999999999987653
No 162
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.35 E-value=0.074 Score=47.16 Aligned_cols=24 Identities=25% Similarity=0.332 Sum_probs=21.1
Q ss_pred eEEEEEecCCchHHHHHHHHHHHh
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
+.|+|+|.+|+|||||...+....
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSC
T ss_pred CEEEEECCCCCCHHHHHHHHHcCC
Confidence 468999999999999999998753
No 163
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.35 E-value=0.071 Score=45.48 Aligned_cols=22 Identities=32% Similarity=0.705 Sum_probs=19.7
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||+|...+....
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6789999999999999988764
No 164
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.31 E-value=0.074 Score=45.69 Aligned_cols=21 Identities=33% Similarity=0.602 Sum_probs=19.1
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|+++|.+|+|||||+..+...
T Consensus 8 I~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999998765
No 165
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=90.22 E-value=0.075 Score=45.48 Aligned_cols=21 Identities=38% Similarity=0.619 Sum_probs=19.2
Q ss_pred EEEEEecCCchHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~ 197 (610)
.|+|+|.+|+|||||...+..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 689999999999999999874
No 166
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=90.19 E-value=0.063 Score=48.95 Aligned_cols=26 Identities=35% Similarity=0.392 Sum_probs=22.6
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
...+++|.|+.|+|||||.+.+..-.
T Consensus 30 ~Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 30 NGERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHcCc
Confidence 34699999999999999999998754
No 167
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.16 E-value=0.077 Score=45.74 Aligned_cols=23 Identities=35% Similarity=0.430 Sum_probs=19.7
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.|+|.+|+|||+|+..+.+..
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 46788999999999999988753
No 168
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.14 E-value=0.076 Score=44.50 Aligned_cols=22 Identities=36% Similarity=0.542 Sum_probs=19.5
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|+|.+|+|||||...+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999998764
No 169
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.11 E-value=0.064 Score=45.90 Aligned_cols=21 Identities=33% Similarity=0.626 Sum_probs=18.5
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|+|+|.+|+|||+|+..+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 678999999999999988654
No 170
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.07 E-value=0.08 Score=45.08 Aligned_cols=22 Identities=32% Similarity=0.733 Sum_probs=19.7
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||||...+.+..
T Consensus 6 i~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 7889999999999999998753
No 171
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.99 E-value=0.079 Score=45.29 Aligned_cols=22 Identities=18% Similarity=0.517 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|..|+|||+|...+....
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999999988764
No 172
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.91 E-value=0.079 Score=45.58 Aligned_cols=22 Identities=27% Similarity=0.631 Sum_probs=19.6
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|+|..|+|||||+..+.+.
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999998775
No 173
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.84 E-value=0.082 Score=45.19 Aligned_cols=23 Identities=30% Similarity=0.507 Sum_probs=20.0
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|+|+|.+|+|||+|+..+.+..
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~~ 30 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDGA 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 38899999999999999987753
No 174
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.84 E-value=0.075 Score=46.19 Aligned_cols=21 Identities=38% Similarity=0.589 Sum_probs=18.6
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|.|+|.+|+|||||+..+.+.
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 778999999999999988753
No 175
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=89.79 E-value=1.3 Score=39.49 Aligned_cols=70 Identities=21% Similarity=0.263 Sum_probs=46.8
Q ss_pred ccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhh
Q 007268 158 SRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKL 230 (610)
Q Consensus 158 GR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l 230 (610)
......+++.+.+..+......|+|..|+|||.++.......-.. ...+-+-++...-..+.+..+-+.+
T Consensus 59 ~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~---g~qv~~l~Pt~~La~Q~~~~~~~~~ 128 (233)
T d2eyqa3 59 DQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDN---HKQVAVLVPTTLLAQQHYDNFRDRF 128 (233)
T ss_dssp HHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHc---CCceEEEccHHHhHHHHHHHHHHHH
Confidence 356667788888888888899999999999999998887765432 1233333444333444444444433
No 176
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.77 E-value=0.075 Score=46.13 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=20.3
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.|+|.+|+|||+|...+....
T Consensus 7 KivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 47899999999999999988753
No 177
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.68 E-value=0.081 Score=45.45 Aligned_cols=24 Identities=29% Similarity=0.487 Sum_probs=21.5
Q ss_pred ceEEEEEecCCchHHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
...|+|+|.+|+|||||...+.+.
T Consensus 5 ~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTC
T ss_pred ccEEEEECCCCCCHHHHHHHHhCC
Confidence 467999999999999999999864
No 178
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.67 E-value=0.087 Score=46.21 Aligned_cols=22 Identities=32% Similarity=0.619 Sum_probs=19.7
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||||+..+....
T Consensus 9 ivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHhhCC
Confidence 7899999999999999998753
No 179
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=89.66 E-value=0.079 Score=45.46 Aligned_cols=22 Identities=41% Similarity=0.623 Sum_probs=19.0
Q ss_pred eEEEEEecCCchHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
--|+|+|.+|+|||||...+..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4578999999999999988854
No 180
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.64 E-value=0.08 Score=46.08 Aligned_cols=22 Identities=36% Similarity=0.514 Sum_probs=19.7
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.|+|.+|+|||+|...+.+..
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 7899999999999999988753
No 181
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=89.61 E-value=0.099 Score=47.54 Aligned_cols=24 Identities=21% Similarity=0.349 Sum_probs=21.6
Q ss_pred eEEEEEecCCchHHHHHHHHHHHh
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
++|+|+|..|+||||+|..+.+..
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHhC
Confidence 589999999999999999987764
No 182
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.57 E-value=0.13 Score=46.07 Aligned_cols=33 Identities=24% Similarity=0.502 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHH
Q 007268 163 LNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 163 ~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
++.|.++|. .+..+++|.+|+|||||...+..+
T Consensus 86 ~~~L~~~l~---~kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 86 IEELKEYLK---GKISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp HHHHHHHHS---SSEEEEECSTTSSHHHHHHHHSTT
T ss_pred HhhHHHHhc---CCeEEEECCCCCCHHHHHHhhcch
Confidence 456666663 357889999999999999887644
No 183
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.51 E-value=0.096 Score=45.73 Aligned_cols=23 Identities=35% Similarity=0.505 Sum_probs=19.6
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|.|+|.+|+|||+|...+....
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 36789999999999999986653
No 184
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=89.47 E-value=0.098 Score=45.06 Aligned_cols=24 Identities=25% Similarity=0.386 Sum_probs=21.5
Q ss_pred ceEEEEEecCCchHHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
.+.|+|+|.+|+|||||...+...
T Consensus 5 ~~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 5 SGFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCCHHHHHHHHhCC
Confidence 467999999999999999999865
No 185
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.32 E-value=0.094 Score=45.48 Aligned_cols=22 Identities=36% Similarity=0.664 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||||+..+.+..
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~~ 26 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNKK 26 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7799999999999999988743
No 186
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.26 E-value=0.084 Score=46.26 Aligned_cols=19 Identities=37% Similarity=0.684 Sum_probs=17.4
Q ss_pred EEEEEecCCchHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKV 195 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v 195 (610)
-|.|+|.+|+|||||+..+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 3679999999999999998
No 187
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=89.25 E-value=0.081 Score=48.32 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=22.9
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+..+++|.|+.|.|||||.+.+..-..
T Consensus 31 ~Gei~~liGpnGaGKSTl~~~i~Gl~~ 57 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 346999999999999999999976543
No 188
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=89.20 E-value=0.099 Score=44.35 Aligned_cols=23 Identities=30% Similarity=0.364 Sum_probs=19.3
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|+|+|.+|+|||||...+....
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 36688999999999999887653
No 189
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.12 E-value=0.1 Score=45.10 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.++|..|+|||+|+..+.+..
T Consensus 5 ivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6789999999999999998763
No 190
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=89.07 E-value=0.094 Score=47.76 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=22.8
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...+++|+|+.|+|||||.+.+.....
T Consensus 27 ~Gei~glvG~nGaGKSTLl~~l~G~~~ 53 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTTLRIISTLIK 53 (238)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 346999999999999999999876543
No 191
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=89.01 E-value=0.13 Score=47.67 Aligned_cols=26 Identities=27% Similarity=0.383 Sum_probs=22.5
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
.+..|+|.+|+||||||.+++.....
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ia~ 55 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQIAG 55 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHT
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 58889999999999999998877544
No 192
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.95 E-value=0.1 Score=44.69 Aligned_cols=21 Identities=29% Similarity=0.738 Sum_probs=19.1
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|+|+|.+|+|||||+..+.+.
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988764
No 193
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=88.89 E-value=0.088 Score=48.54 Aligned_cols=26 Identities=31% Similarity=0.404 Sum_probs=22.6
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
..+++|.|+.|+|||||++.+..-..
T Consensus 30 Gei~~liG~nGaGKSTLl~~i~Gl~~ 55 (254)
T d1g6ha_ 30 GDVTLIIGPNGSGKSTLINVITGFLK 55 (254)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCEEEEECCCCCcHHHHHHHHHCCCc
Confidence 46899999999999999999977644
No 194
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.84 E-value=0.1 Score=44.76 Aligned_cols=22 Identities=36% Similarity=0.546 Sum_probs=18.9
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|.++|.+|+|||+|+..+...
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3779999999999999988653
No 195
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=88.82 E-value=0.11 Score=44.36 Aligned_cols=24 Identities=25% Similarity=0.574 Sum_probs=20.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHHh
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
.-|.|+|.+|+|||||+..+.+..
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~~~ 28 (168)
T d1u8za_ 5 HKVIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHSC
T ss_pred eEEEEECCCCcCHHHHHHHHHhCC
Confidence 357899999999999999987643
No 196
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=88.79 E-value=0.13 Score=43.93 Aligned_cols=23 Identities=30% Similarity=0.439 Sum_probs=19.2
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
--|.|+|.+|+|||||...+.+.
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTCC
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 34678999999999999988654
No 197
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.76 E-value=0.11 Score=45.33 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=19.3
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+++|.+|+|||+|+..+....
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6788999999999999988654
No 198
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.62 E-value=0.11 Score=44.62 Aligned_cols=22 Identities=32% Similarity=0.644 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.++|.+|+|||+|...+.+..
T Consensus 10 i~vvG~~~vGKTsli~~l~~~~ 31 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDDT 31 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999987653
No 199
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.55 E-value=0.12 Score=44.22 Aligned_cols=22 Identities=36% Similarity=0.686 Sum_probs=19.4
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|.++|.+|+|||+|+..+.+..
T Consensus 7 i~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6678999999999999998754
No 200
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=88.55 E-value=0.085 Score=45.56 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=18.4
Q ss_pred EEEEecCCchHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~ 197 (610)
|+|+|.+|+|||||...+..
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 89999999999999999864
No 201
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=88.52 E-value=0.11 Score=44.68 Aligned_cols=23 Identities=30% Similarity=0.473 Sum_probs=20.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+-|.|.|.+|+||||+|..+..+
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 56889999999999999998865
No 202
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=88.44 E-value=0.15 Score=45.24 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=24.0
Q ss_pred eEEEEEecC-CchHHHHHHHHHHHhccC
Q 007268 176 NMLLIYGMG-GIGKTTLAKKVARKAESD 202 (610)
Q Consensus 176 ~vv~I~G~g-GiGKTtLA~~v~~~~~~~ 202 (610)
+.+.|.|-| |+||||++..++.....+
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~ 29 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAA 29 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHC
Confidence 568899998 999999999999988765
No 203
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=88.37 E-value=0.094 Score=48.27 Aligned_cols=26 Identities=31% Similarity=0.386 Sum_probs=21.8
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
....++|+|..|+|||||++.+..-.
T Consensus 43 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHhcC
Confidence 44689999999999999999886543
No 204
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.22 E-value=0.066 Score=45.93 Aligned_cols=21 Identities=43% Similarity=0.667 Sum_probs=17.3
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|.|+|.+|+|||+|...+.+.
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678899999999999887654
No 205
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=88.08 E-value=0.12 Score=44.44 Aligned_cols=22 Identities=27% Similarity=0.528 Sum_probs=19.7
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
.|+|+|.+|+|||||...+.+.
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999998754
No 206
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=87.97 E-value=0.097 Score=47.48 Aligned_cols=23 Identities=35% Similarity=0.525 Sum_probs=20.8
Q ss_pred ceEEEEEecCCchHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
..+++|.|+.|.|||||.+.+..
T Consensus 25 Gei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 25 GEILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp TCEEECBCCTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCcHHHHHHHHhC
Confidence 46899999999999999998876
No 207
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.90 E-value=0.14 Score=44.14 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=20.2
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|+++|.+|+|||+|...+.+..
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 47899999999999999988754
No 208
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=87.85 E-value=0.13 Score=51.42 Aligned_cols=26 Identities=35% Similarity=0.630 Sum_probs=22.9
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.+-|.++|+.|+|||.||+.++....
T Consensus 49 ksNILliGPTGvGKTlLAr~LAk~l~ 74 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIARRLAKLAN 74 (443)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred cccEEEECCCCCCHHHHHHHHHHHhC
Confidence 35689999999999999999998764
No 209
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=87.71 E-value=0.096 Score=45.38 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=18.6
Q ss_pred EEEEEecCCchHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~ 197 (610)
-|+|+|.+|+|||||...+..
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999998754
No 210
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=87.71 E-value=0.14 Score=43.03 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=19.2
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|+|.+|+|||||...+...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3679999999999999998754
No 211
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=87.68 E-value=0.14 Score=43.72 Aligned_cols=23 Identities=35% Similarity=0.502 Sum_probs=20.5
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
.-|.|.|.+|+||||+|..+..+
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 56889999999999999988776
No 212
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=87.63 E-value=0.12 Score=44.52 Aligned_cols=23 Identities=35% Similarity=0.463 Sum_probs=20.1
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
.-|.|.|.+|+||||+|..+..+
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc
Confidence 56889999999999999998764
No 213
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=87.61 E-value=0.2 Score=43.12 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=23.1
Q ss_pred HHHHHhc-CCCceEEEEEecCCchHHHHHHHHHH
Q 007268 165 EIMDALK-NPNVNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 165 ~L~~~L~-~~~~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
.+.+.|. ..+.--|.|+|.+|+|||||...+..
T Consensus 6 ~~~~~l~~~~k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 6 SMFDKLWGSNKELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp HHHGGGTTCSSCEEEEEEEETTSSHHHHHHHTCC
T ss_pred HHHHHHhCCCceEEEEEECCCCCCHHHHHHHHhc
Confidence 3444332 33444577999999999999998753
No 214
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=87.44 E-value=0.15 Score=45.73 Aligned_cols=23 Identities=35% Similarity=0.553 Sum_probs=19.5
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
.-|.|.|.+|+|||||+..+...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 45789999999999999988544
No 215
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=87.29 E-value=0.22 Score=48.25 Aligned_cols=61 Identities=16% Similarity=0.053 Sum_probs=36.7
Q ss_pred HHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccC-CCCCeEEEEEeCCCCChHHHHHH
Q 007268 162 ILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESD-KLFDQVVLSEVSESRDVRKIQGE 225 (610)
Q Consensus 162 ~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~-~~f~~~~wv~vs~~~~~~~~~~~ 225 (610)
....+...+. .+++.|.|++|+||||++..+....... ..-...+.+..+.......+...
T Consensus 153 Q~~A~~~al~---~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~ 214 (359)
T d1w36d1 153 QKVAAAVALT---RRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTES 214 (359)
T ss_dssp HHHHHHHHHT---BSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHH
T ss_pred HHHHHHHHHc---CCeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEecCcHHHHHHHHHH
Confidence 3444555552 3699999999999999987765443221 11234567766655444444333
No 216
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=86.79 E-value=0.12 Score=44.37 Aligned_cols=25 Identities=12% Similarity=0.136 Sum_probs=20.9
Q ss_pred CCceEEEEEecCCchHHHHHHHHHH
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
++...|+|+|.+++|||||...+..
T Consensus 14 ~~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 14 DTGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SCSEEEEEEECTTSSHHHHHTTTCC
T ss_pred ccCCEEEEECCCCCCHHHHHHHHhC
Confidence 3456799999999999999987743
No 217
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.63 E-value=0.099 Score=44.82 Aligned_cols=21 Identities=33% Similarity=0.599 Sum_probs=8.3
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|.|+|.+|+|||||...+...
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEECCCCC------------
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 778999999999999887754
No 218
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=86.01 E-value=0.18 Score=43.41 Aligned_cols=22 Identities=32% Similarity=0.459 Sum_probs=19.5
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|+|..|+|||||...+...
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 4789999999999999998764
No 219
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=85.66 E-value=0.36 Score=42.16 Aligned_cols=39 Identities=23% Similarity=0.353 Sum_probs=31.0
Q ss_pred HHHHHHHHhc-CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 162 ILNEIMDALK-NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 162 ~~~~L~~~L~-~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.+..+..+|. .++...+.|+|+++.|||++|..+.+-..
T Consensus 39 Fl~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~ 78 (205)
T d1tuea_ 39 FLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ 78 (205)
T ss_dssp HHHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCceEEEEECCCCccHHHHHHHHHHHhC
Confidence 3556666665 45678999999999999999999887754
No 220
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=84.59 E-value=0.27 Score=45.57 Aligned_cols=27 Identities=19% Similarity=0.128 Sum_probs=23.4
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+.|-|+|+|.+|.|||||+..+.....
T Consensus 5 ~iRni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 5 RLRNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp GEEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred hceEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 568899999999999999999876544
No 221
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.50 E-value=0.1 Score=43.84 Aligned_cols=22 Identities=27% Similarity=0.554 Sum_probs=19.9
Q ss_pred EEEEecCCchHHHHHHHHHHHh
Q 007268 178 LLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~ 199 (610)
|+|+|.+|+|||||...+....
T Consensus 3 I~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999998664
No 222
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=84.01 E-value=0.55 Score=42.95 Aligned_cols=37 Identities=30% Similarity=0.536 Sum_probs=26.6
Q ss_pred HHHHHHHHhcC--CCceEEEEEecCCchHHHHHHHHHHH
Q 007268 162 ILNEIMDALKN--PNVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 162 ~~~~L~~~L~~--~~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
.+.++...+.+ ...-.|+|+|.+|+|||||...++.+
T Consensus 17 ~l~e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 17 KLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHhhcCCCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 34444444442 23456889999999999999999865
No 223
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=82.97 E-value=0.42 Score=44.96 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=22.7
Q ss_pred EEEEEecCCchHHHHHHH-HHHHhccC-CCCCeEEEEEeCC
Q 007268 177 MLLIYGMGGIGKTTLAKK-VARKAESD-KLFDQVVLSEVSE 215 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~-v~~~~~~~-~~f~~~~wv~vs~ 215 (610)
.+.|.|.+|+||||.+.+ +++-.... .....+++++.+.
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~ 66 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTN 66 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSH
T ss_pred CEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccH
Confidence 367889999999987654 33332221 1123455655443
No 224
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=82.69 E-value=0.45 Score=44.30 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=23.0
Q ss_pred eEEEEEecCCchHHHHHHH-HHHHhcc-CCCCCeEEEEEeCC
Q 007268 176 NMLLIYGMGGIGKTTLAKK-VARKAES-DKLFDQVVLSEVSE 215 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~-v~~~~~~-~~~f~~~~wv~vs~ 215 (610)
..+.|.|.+|+||||.+.+ +.+-... ...-..+..++.+.
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~tn 56 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTN 56 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSH
T ss_pred CCEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEeCcH
Confidence 3467889999999976543 3332222 11123566665543
No 225
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=82.19 E-value=0.42 Score=44.00 Aligned_cols=24 Identities=33% Similarity=0.527 Sum_probs=21.1
Q ss_pred ceEEEEEecCCchHHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
.|.|+|+|..|.|||||+..+...
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll~~ 25 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALLYK 25 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHH
T ss_pred eeEEEEEcCCCCcHHHHHHHHHHH
Confidence 478999999999999999988654
No 226
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=82.17 E-value=0.38 Score=44.29 Aligned_cols=23 Identities=30% Similarity=0.460 Sum_probs=19.8
Q ss_pred ceEEEEEecCCchHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
.++.+|+|..|+|||||...++.
T Consensus 23 ~~ln~IvG~NGsGKStiL~Ai~~ 45 (292)
T g1f2t.1 23 EGINLIIGQNGSGKSSLLDAILV 45 (292)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHH
Confidence 35778999999999999988764
No 227
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=81.40 E-value=0.38 Score=45.71 Aligned_cols=24 Identities=29% Similarity=0.380 Sum_probs=20.5
Q ss_pred EEEEEecCCchHHHHHHHHHHHhc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.|.|.|..|+||||+...++....
T Consensus 168 nili~G~tgSGKTT~l~al~~~i~ 191 (323)
T d1g6oa_ 168 NVIVCGGTGSGKTTYIKSIMEFIP 191 (323)
T ss_dssp CEEEEESTTSSHHHHHHHHGGGSC
T ss_pred CEEEEeeccccchHHHHHHhhhcc
Confidence 478999999999999998886543
No 228
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=80.22 E-value=0.93 Score=44.32 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 160 ASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 160 ~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
+..++.+.+++ ....+.|.|.|+.|+||||....+.+...
T Consensus 144 ~~~~~~l~~l~-~~~~GliLvtGpTGSGKSTTl~~~l~~~~ 183 (401)
T d1p9ra_ 144 AHNHDNFRRLI-KRPHGIILVTGPTGSGKSTTLYAGLQELN 183 (401)
T ss_dssp HHHHHHHHHHH-TSSSEEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH-hhhhceEEEEcCCCCCccHHHHHHhhhhc
Confidence 44455555544 44568999999999999999999988764
No 229
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=80.14 E-value=0.43 Score=45.45 Aligned_cols=28 Identities=29% Similarity=0.445 Sum_probs=23.6
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhccC
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAESD 202 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~~ 202 (610)
+-.|.|-|.-|+||||+++.+.+....+
T Consensus 6 ~~rI~iEG~iGsGKSTl~~~L~~~l~~~ 33 (333)
T d1p6xa_ 6 IVRIYLDGVYGIGKSTTGRVMASAASGG 33 (333)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHSGGGCS
T ss_pred eEEEEEECCccCCHHHHHHHHHHHhccC
Confidence 3467888999999999999999887643
No 230
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=80.13 E-value=0.27 Score=44.15 Aligned_cols=31 Identities=19% Similarity=0.474 Sum_probs=22.0
Q ss_pred HHHHHhcCCCceEEEEEecCCchHHHHHHHHHHH
Q 007268 165 EIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 165 ~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+|.++|. .+..++.|.+|+|||||...+..+
T Consensus 90 ~L~~~l~---~~~~vl~G~SGVGKSSLiN~L~~~ 120 (231)
T d1t9ha2 90 DIIPHFQ---DKTTVFAGQSGVGKSSLLNAISPE 120 (231)
T ss_dssp TTGGGGT---TSEEEEEESHHHHHHHHHHHHCC-
T ss_pred HHHHhhc---cceEEEECCCCccHHHHHHhhccH
Confidence 3444452 245678899999999999887643
No 231
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=79.82 E-value=0.57 Score=41.86 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=21.5
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHh
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
.++|+|.|-.+.|||||+..+....
T Consensus 5 ~p~IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 5 SPIVSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCccHHHHHHHHHhhc
Confidence 3579999999999999999887653
No 232
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=79.38 E-value=0.84 Score=36.76 Aligned_cols=52 Identities=13% Similarity=0.050 Sum_probs=34.6
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhC
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLG 231 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~ 231 (610)
..++..|+++.|.|||+++..++.. ....+++.+....-..+..+.+.+.++
T Consensus 7 ~~~~~ll~apTGsGKT~~~~~~~~~------~~~~vli~~P~~~l~~q~~~~~~~~~~ 58 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKVPAAYAA------QGYKVLVLNPSVAATLGFGAYMSKAHG 58 (136)
T ss_dssp SCEEEEEECCTTSCTTTHHHHHHHT------TTCCEEEEESCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHH------cCCcEEEEcChHHHHHHHHHHHHHHhh
Confidence 4578899999999999998776643 233466666655545555555555543
No 233
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=79.02 E-value=2.6 Score=37.51 Aligned_cols=26 Identities=35% Similarity=0.409 Sum_probs=22.2
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHH
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+..+++.|+|+.+.||||+.+.+.-.
T Consensus 39 ~~~~~~iiTGpN~~GKSt~lk~i~l~ 64 (234)
T d1wb9a2 39 PQRRMLIITGPNMGGKSTYMRQTALI 64 (234)
T ss_dssp SSSCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCceEEEEeccCchhhHHHHHHHHHH
Confidence 34578999999999999999998654
No 234
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=77.18 E-value=1.4 Score=40.33 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=30.2
Q ss_pred HHHHHHHHhc--CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 162 ILNEIMDALK--NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 162 ~~~~L~~~L~--~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.+..+..+|. .+....+.++|+|+.|||+++..+.+-..
T Consensus 89 f~~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~lg 129 (267)
T d1u0ja_ 89 AASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTVP 129 (267)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCccEEEEEEcCCCCCHHHHHHHHHHHhc
Confidence 3445666674 25567899999999999999999888653
No 235
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=76.77 E-value=0.66 Score=39.59 Aligned_cols=21 Identities=43% Similarity=0.468 Sum_probs=19.2
Q ss_pred EEEEEecCCchHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~ 197 (610)
.|+|+|..++|||||...+..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 589999999999999998874
No 236
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=75.95 E-value=0.56 Score=44.58 Aligned_cols=25 Identities=32% Similarity=0.375 Sum_probs=22.0
Q ss_pred EEEEEecCCchHHHHHHHHHHHhcc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
.|+|-|.-|+||||+++.+.+....
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 5889999999999999999987653
No 237
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=75.65 E-value=0.58 Score=44.39 Aligned_cols=26 Identities=27% Similarity=0.327 Sum_probs=20.1
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
...|+|-|.-|+||||+++.+.+...
T Consensus 4 ~lrI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 4 LLRVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEEEECSCTTSSHHHHHHHHTC---
T ss_pred ceEEEEECCcCCCHHHHHHHHHHHhC
Confidence 34588999999999999999876543
No 238
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=74.84 E-value=0.85 Score=42.78 Aligned_cols=23 Identities=30% Similarity=0.460 Sum_probs=19.6
Q ss_pred ceEEEEEecCCchHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
.++..|+|..|+||||+..+++.
T Consensus 23 ~~~~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 23 EGINLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHH
Confidence 35778999999999999988754
No 239
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.79 E-value=5.1 Score=36.22 Aligned_cols=42 Identities=21% Similarity=0.168 Sum_probs=34.0
Q ss_pred cHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 159 RASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 159 R~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
....+++|.+.+.++.+..-.|.|.-|+|||-+|...+...-
T Consensus 88 Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~ 129 (264)
T d1gm5a3 88 QKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNY 129 (264)
T ss_dssp HHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHH
Confidence 455677888888877777889999999999999988776543
No 240
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.33 E-value=1.1 Score=41.18 Aligned_cols=28 Identities=29% Similarity=0.363 Sum_probs=24.2
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHh
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
++.+.||+|+|+-+.|||+|+..++...
T Consensus 29 ~~~v~vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 29 TQPMVVVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp CSBEEEEEEEEBTTSSHHHHHHHHTTCS
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHcCCC
Confidence 4568899999999999999999987643
No 241
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.55 E-value=1.2 Score=42.40 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=23.9
Q ss_pred CCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 173 PNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
++.|-|+|+|-.|.|||||+-.+.....
T Consensus 15 ~~IRNI~iiGhvd~GKTTL~d~Ll~~~g 42 (341)
T d1n0ua2 15 TNVRNMSVIAHVDHGKSTLTDSLVQRAG 42 (341)
T ss_dssp GGEEEEEEECCGGGTHHHHHHHHHHHHB
T ss_pred ccCcEEEEEeCCCCcHHHHHHHHHHHCC
Confidence 4678899999999999999998876543
No 242
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.89 E-value=1.3 Score=43.26 Aligned_cols=23 Identities=22% Similarity=0.341 Sum_probs=20.2
Q ss_pred ceEEEEEecCCchHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
+--|+|+|.+|+|||||...+..
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 34689999999999999999874
No 243
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=71.05 E-value=0.46 Score=40.93 Aligned_cols=25 Identities=20% Similarity=0.174 Sum_probs=20.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
++.+|+|+.|+||||+...+..-..
T Consensus 25 ~~tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 25 LVTTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHHS
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhc
Confidence 3566889999999999999876543
No 244
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=70.27 E-value=0.99 Score=42.41 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=20.3
Q ss_pred eEEEEEecCCchHHHHHHHHHHHh
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
++-+|+|+.|+||||+..++.--.
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 577899999999999998876543
No 245
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=68.24 E-value=1.5 Score=38.30 Aligned_cols=22 Identities=27% Similarity=0.173 Sum_probs=19.2
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|.|-.+.|||||+.++...
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~ 26 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYV 26 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHH
Confidence 3889999999999999998654
No 246
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=65.50 E-value=1.6 Score=40.04 Aligned_cols=22 Identities=27% Similarity=0.418 Sum_probs=19.6
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|+|++.+|||||-..+-+.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHCC
Confidence 5899999999999999988754
No 247
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.51 E-value=2 Score=33.77 Aligned_cols=26 Identities=4% Similarity=-0.084 Sum_probs=22.2
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.-+|.+.|..|+||+|||..+.....
T Consensus 6 gf~i~~tg~~~~gk~~ia~al~~~l~ 31 (122)
T d1g8fa3 6 GFSIVLGNSLTVSREQLSIALLSTFL 31 (122)
T ss_dssp CEEEEECTTCCSCHHHHHHHHHHHHT
T ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 34788999999999999999977764
No 248
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=63.34 E-value=1.9 Score=39.93 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=20.1
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|+|+|.+.+|||||-..+-..
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 5999999999999999999865
No 249
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=61.15 E-value=2 Score=40.22 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=18.5
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
|+|+|.+.+|||||-..+-..
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 899999999999999998654
No 250
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=61.09 E-value=3.5 Score=30.94 Aligned_cols=25 Identities=24% Similarity=0.509 Sum_probs=21.4
Q ss_pred CceEEEEEecCCchHHHHHHHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
..+-|-+.|.||+|.+.||+.+.+.
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~ 31 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNE 31 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhC
Confidence 3467899999999999999888765
No 251
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=60.42 E-value=6.9 Score=33.07 Aligned_cols=21 Identities=38% Similarity=0.384 Sum_probs=15.9
Q ss_pred EEEEecCCchHHHHHHHHHHH
Q 007268 178 LLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~ 198 (610)
+.|+++.|.|||.++..+...
T Consensus 26 ~lv~~pTGsGKT~i~~~~~~~ 46 (200)
T d1wp9a1 26 CLIVLPTGLGKTLIAMMIAEY 46 (200)
T ss_dssp EEEECCTTSCHHHHHHHHHHH
T ss_pred eEEEeCCCCcHHHHHHHHHHH
Confidence 457799999999876655543
No 252
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=60.30 E-value=4.9 Score=36.47 Aligned_cols=26 Identities=35% Similarity=0.556 Sum_probs=21.8
Q ss_pred CceEEEEEecCCchHHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
..-.|+|+|++.+|||||+..+....
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~~ 136 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKKN 136 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTSC
T ss_pred CceEEEEEecCccchhhhhhhhhccc
Confidence 44568999999999999999887643
No 253
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=60.03 E-value=2 Score=39.89 Aligned_cols=18 Identities=39% Similarity=0.857 Sum_probs=15.7
Q ss_pred eEEEEEecCCchHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAK 193 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~ 193 (610)
.+..+.|++|.|||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 567899999999999984
No 254
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=59.82 E-value=1.9 Score=40.12 Aligned_cols=19 Identities=37% Similarity=0.821 Sum_probs=16.3
Q ss_pred eEEEEEecCCchHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKK 194 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~ 194 (610)
.+..+.|++|.|||||...
T Consensus 15 ~valffGLSGTGKTTLs~~ 33 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLSTD 33 (318)
T ss_dssp CEEEEEECTTSCHHHHTCB
T ss_pred CEEEEEccCCCCccccccC
Confidence 5778899999999999753
No 255
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=58.08 E-value=2.3 Score=33.53 Aligned_cols=21 Identities=19% Similarity=-0.069 Sum_probs=16.7
Q ss_pred ceEEEEEecCCchHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKV 195 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v 195 (610)
.+.+.|+++.|.|||..|...
T Consensus 7 ~~~~il~~~tGsGKT~~~~~~ 27 (140)
T d1yksa1 7 GMTTVLDFHPGAGKTRRFLPQ 27 (140)
T ss_dssp TCEEEECCCTTSSTTTTHHHH
T ss_pred CCcEEEEcCCCCChhHHHHHH
Confidence 357788999999999777544
No 256
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=58.07 E-value=4.3 Score=39.41 Aligned_cols=27 Identities=30% Similarity=0.418 Sum_probs=21.4
Q ss_pred ceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
.+-+.|+|..|+|||+++..+......
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~ 76 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLL 76 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHh
Confidence 356899999999999998877665543
No 257
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=57.50 E-value=2 Score=39.71 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=19.0
Q ss_pred eEEEEEecCCchHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~ 197 (610)
++-+|+|+-|+|||++..++.-
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~~ 46 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIKW 46 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHH
Confidence 4778999999999999887754
No 258
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=57.41 E-value=4.2 Score=41.47 Aligned_cols=37 Identities=22% Similarity=0.193 Sum_probs=22.3
Q ss_pred EEEEecCCchHHHHHHH-HHHHhcc-CCCCCeEEEEEeC
Q 007268 178 LLIYGMGGIGKTTLAKK-VARKAES-DKLFDQVVLSEVS 214 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~-v~~~~~~-~~~f~~~~wv~vs 214 (610)
+.|.|.+|+||||.+.+ +.+-... .-....++.++..
T Consensus 27 ~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft 65 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFT 65 (623)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESS
T ss_pred EEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEecc
Confidence 55669999999988755 3333222 1123457777654
No 259
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=56.22 E-value=6.4 Score=33.58 Aligned_cols=19 Identities=37% Similarity=0.289 Sum_probs=15.4
Q ss_pred EEEEEecCCchHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKV 195 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v 195 (610)
-+.|.++.|.|||+.|...
T Consensus 42 ~~il~apTGsGKT~~a~l~ 60 (202)
T d2p6ra3 42 NLLLAMPTAAGKTLLAEMA 60 (202)
T ss_dssp CEEEECSSHHHHHHHHHHH
T ss_pred CEEEEcCCCCchhHHHHHH
Confidence 4679999999999987543
No 260
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=55.82 E-value=2.6 Score=39.29 Aligned_cols=18 Identities=39% Similarity=0.846 Sum_probs=15.6
Q ss_pred eEEEEEecCCchHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAK 193 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~ 193 (610)
.+..+.|++|.|||||..
T Consensus 15 d~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp CEEEEECCTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 466799999999999984
No 261
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.53 E-value=3.2 Score=39.95 Aligned_cols=23 Identities=26% Similarity=0.407 Sum_probs=19.7
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
++-+|+|..|+|||++..++.--
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~~ 48 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISFV 48 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
Confidence 47789999999999999988643
No 262
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=48.62 E-value=4.9 Score=34.49 Aligned_cols=21 Identities=29% Similarity=0.300 Sum_probs=18.6
Q ss_pred EEEEEecCCchHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~ 197 (610)
-|+|.|-.+.|||||+..+..
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 388999999999999998864
No 263
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=47.92 E-value=21 Score=28.76 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=38.0
Q ss_pred CceEEEEEecCC-chHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHh
Q 007268 174 NVNMLLIYGMGG-IGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDVESESGRARILYDRLK 251 (610)
Q Consensus 174 ~~~vv~I~G~gG-iGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~ 251 (610)
+++.|+|.|-.| +|++|| .+.++...+ |..... ++.+ +.. .+.+.+..+....-...+......+...+.
T Consensus 1 ~pK~I~IlGsTGSIG~~tL--~Vi~~~~d~--f~v~~l-sa~~--N~~-~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~ 71 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTL--DLIERNLDR--YQVIAL-TANR--NVK-DLADAAKRTNAKRAVIADPSLYNDLKEALA 71 (150)
T ss_dssp CCEEEEEETTTSHHHHHHH--HHHHHTGGG--EEEEEE-EESS--CHH-HHHHHHHHTTCSEEEESCGGGHHHHHHHTT
T ss_pred CCcEEEEECCCcHHHHHHH--HHHHcCCCC--cEEEEE-EeCC--CHH-HHHHHHHhhccccceeccHHHHHHHHHHhh
Confidence 357899999999 899987 455554433 644443 3333 333 444555555544332233333344444443
No 264
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=47.91 E-value=6.4 Score=40.88 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=24.8
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
......|.|.|..|.|||+-++.+.+...
T Consensus 83 ~~~~QsIiisGeSGsGKTe~~k~il~yL~ 111 (684)
T d1lkxa_ 83 SQENQCVIISGESGAGKTEASKKIMQFLT 111 (684)
T ss_dssp HCCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 44567899999999999999999988764
No 265
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=47.77 E-value=18 Score=30.66 Aligned_cols=43 Identities=19% Similarity=0.051 Sum_probs=28.2
Q ss_pred CccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 155 AFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 155 ~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.+.-|+-..+.+..++.. + ...|+++.|.|||.+|..+.....
T Consensus 68 ~~~Lr~yQ~eav~~~~~~-~--~~ll~~~tG~GKT~~a~~~~~~~~ 110 (206)
T d2fz4a1 68 EISLRDYQEKALERWLVD-K--RGCIVLPTGSGKTHVAMAAINELS 110 (206)
T ss_dssp CCCCCHHHHHHHHHHTTT-S--EEEEEESSSTTHHHHHHHHHHHSC
T ss_pred CCCcCHHHHHHHHHHHhC-C--CcEEEeCCCCCceehHHhHHHHhc
Confidence 344565555555555533 2 234778999999999988886653
No 266
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=47.34 E-value=6.6 Score=40.96 Aligned_cols=29 Identities=38% Similarity=0.426 Sum_probs=24.7
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
......|.|.|.+|.|||.-++.+.+...
T Consensus 122 ~~~nQsIiisGeSGaGKTe~~k~il~yL~ 150 (712)
T d1d0xa2 122 DRQNQSLLITGESGAGKTENTKKVIQYLA 150 (712)
T ss_dssp HTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred hCCCceEEEeCCCCCCHHHHHHHHHHHHH
Confidence 45667999999999999999999987654
No 267
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=47.01 E-value=5.7 Score=34.73 Aligned_cols=24 Identities=25% Similarity=0.340 Sum_probs=20.0
Q ss_pred EEEEEecCCchHHHHHHHHHHHhc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
-|+|.|-.+.|||||+.++.....
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHB
T ss_pred EEEEEecCCCCHHHHHHHHHHHcC
Confidence 478999999999999988865443
No 268
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=46.67 E-value=16 Score=35.14 Aligned_cols=63 Identities=17% Similarity=0.256 Sum_probs=43.8
Q ss_pred HHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhC
Q 007268 162 ILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLG 231 (610)
Q Consensus 162 ~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~ 231 (610)
.+++|.+.|..+ .+-..|.|..|+|||.++..++..... -+.|-+.+.....++..++..-++
T Consensus 19 aI~~l~~~l~~g-~~~q~l~GltGS~ka~~iA~l~~~~~r------p~LVVt~n~~~A~qL~~dL~~~l~ 81 (413)
T d1t5la1 19 AIAKLVDGLRRG-VKHQTLLGATGTGKTFTISNVIAQVNK------PTLVIAHNKTLAGQLYSELKEFFP 81 (413)
T ss_dssp HHHHHHHHHHHT-CSEEEEEECTTSCHHHHHHHHHHHHTC------CEEEECSSHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcC-CCcEEEeCCCCcHHHHHHHHHHHHhCC------CEEEEeCCHHHHHHHHHHHHHHcC
Confidence 377888877643 456678999999999999999887542 234445555556666666665554
No 269
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=45.78 E-value=7.1 Score=40.71 Aligned_cols=29 Identities=31% Similarity=0.349 Sum_probs=24.9
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
..+...|.|.|..|.|||+-++.+.+...
T Consensus 88 ~~~~Q~IiisGeSGaGKTe~~k~il~yL~ 116 (710)
T d1br2a2 88 DREDQSILCTGESGAGKTENTKKVIQYLA 116 (710)
T ss_dssp HTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred hCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45567899999999999999999988764
No 270
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=45.51 E-value=5.7 Score=29.24 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=18.4
Q ss_pred EEEEEecCCchHHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
-|-++|.||+|-+.||+.+.+.
T Consensus 3 ~ihfiGIgG~GMs~LA~~L~~~ 24 (89)
T d1j6ua1 3 KIHFVGIGGIGMSAVALHEFSN 24 (89)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEEeECHHHHHHHHHHHHhC
Confidence 3678899999999999887654
No 271
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=43.73 E-value=8.1 Score=40.81 Aligned_cols=29 Identities=31% Similarity=0.398 Sum_probs=24.6
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
......|.|.|.+|+|||.-++.+.+...
T Consensus 120 ~~~~QsIiisGeSGaGKTe~~K~il~yL~ 148 (794)
T d2mysa2 120 DRENQSILITGESGAGKTVNTKRVIQYFA 148 (794)
T ss_dssp HTCCEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 45567899999999999999999887764
No 272
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=43.72 E-value=6.8 Score=34.29 Aligned_cols=25 Identities=24% Similarity=0.271 Sum_probs=20.8
Q ss_pred eEEEEEecCCchHHHHHHHHHHHhc
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
-.++|+|-...|||||+.++.....
T Consensus 10 ~~i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 10 LRFLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHcC
Confidence 3478889999999999999876544
No 273
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=43.33 E-value=5.9 Score=33.63 Aligned_cols=21 Identities=33% Similarity=0.336 Sum_probs=18.3
Q ss_pred EEEEEecCCchHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~ 197 (610)
-|+|.|-.+.|||||+..+..
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 468999999999999999864
No 274
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=42.68 E-value=8.1 Score=40.78 Aligned_cols=30 Identities=33% Similarity=0.319 Sum_probs=25.3
Q ss_pred cCCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 171 KNPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 171 ~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
.......|.|.|.+|.|||.-++.+.+...
T Consensus 117 ~~~~nQ~IiisGESGaGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 117 TDRENQSCLITGESGAGKTENTKKVIMYLA 146 (789)
T ss_dssp HHTSEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HhCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 345668999999999999999999888754
No 275
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=41.73 E-value=14 Score=33.45 Aligned_cols=25 Identities=12% Similarity=0.331 Sum_probs=21.6
Q ss_pred CceEEEEEecCCchHHHHHHHHHHH
Q 007268 174 NVNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 174 ~~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
..+-|+|+|--+.|||||...+...
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCeEEEEcCCCCCHHHHHHHHhCC
Confidence 3456889999999999999999864
No 276
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=41.02 E-value=26 Score=33.38 Aligned_cols=62 Identities=16% Similarity=0.284 Sum_probs=41.2
Q ss_pred HHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhh
Q 007268 162 ILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKL 230 (610)
Q Consensus 162 ~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l 230 (610)
.+++|.+.|.++ .+.+.|.|..|+|||.++..++..... .++.| +.+......+..++..-+
T Consensus 16 aI~~l~~~L~~g-~~~~~L~GlsgS~ka~~~A~l~~~~~r-----p~LvV-t~~~~~A~~l~~dL~~~l 77 (408)
T d1c4oa1 16 AIAGLVEALRDG-ERFVTLLGATGTGKTVTMAKVIEALGR-----PALVL-APNKILAAQLAAEFRELF 77 (408)
T ss_dssp HHHHHHHHHHTT-CSEEEEEECTTSCHHHHHHHHHHHHTC-----CEEEE-ESSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHHHHhCC-----CEEEE-eCCHHHHHHHHHHHHHhc
Confidence 388898888753 466899999999999999998877643 23333 344444444444444433
No 277
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=40.24 E-value=9.7 Score=39.78 Aligned_cols=29 Identities=28% Similarity=0.347 Sum_probs=24.3
Q ss_pred CCCceEEEEEecCCchHHHHHHHHHHHhc
Q 007268 172 NPNVNMLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 172 ~~~~~vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
..+...|.|.|..|.|||.-++.+.+...
T Consensus 91 ~~~~Q~IiisGeSGsGKTe~~k~il~~l~ 119 (730)
T d1w7ja2 91 DERNQSIIVSGESGAGKTVSAKYAMRYFA 119 (730)
T ss_dssp HTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred hCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999877653
No 278
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=39.22 E-value=7.4 Score=33.30 Aligned_cols=21 Identities=29% Similarity=0.332 Sum_probs=18.7
Q ss_pred EEEEEecCCchHHHHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKKVAR 197 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~ 197 (610)
.|+|+|-...|||||+..+..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 589999999999999998864
No 279
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=38.67 E-value=8.7 Score=33.62 Aligned_cols=23 Identities=30% Similarity=0.418 Sum_probs=20.1
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+++.|.|+...||||+.+.+.-.
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~ 58 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALI 58 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHH
T ss_pred cEEEEECCCccccchhhhhhHHH
Confidence 47899999999999999988654
No 280
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=37.83 E-value=16 Score=30.63 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=24.9
Q ss_pred EEEEecCCchHHHHHHHHHHHhccCCCCCeEEEEEeCCCCC
Q 007268 178 LLIYGMGGIGKTTLAKKVARKAESDKLFDQVVLSEVSESRD 218 (610)
Q Consensus 178 v~I~G~gGiGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~ 218 (610)
+.|.|-.++|||..|.+++. .+..+.+|--+..++
T Consensus 2 iLVtGGarSGKS~~AE~l~~------~~~~~~YiAT~~~~D 36 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIG------DAPQVLYIATSQILD 36 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHC------SCSSEEEEECCCC--
T ss_pred EEEECCCCccHHHHHHHHHh------cCCCcEEEEccCCCC
Confidence 68999999999999988752 145567776555543
No 281
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=37.04 E-value=8.7 Score=34.10 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=19.7
Q ss_pred EEEEEecCCchHHHHHHHHHHHh
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKA 199 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~ 199 (610)
-|+|.|-.+.|||||+-++....
T Consensus 26 Ni~iiGHVD~GKSTL~~~Ll~~~ 48 (245)
T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLT 48 (245)
T ss_dssp EEEEEECGGGTHHHHHHHHHHHT
T ss_pred EEEEEeeCCCCHHHHHHHHHHHc
Confidence 38899999999999999886544
No 282
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.96 E-value=10 Score=33.50 Aligned_cols=24 Identities=21% Similarity=0.263 Sum_probs=20.5
Q ss_pred EEEEEecCCchHHHHHHHHHHHhc
Q 007268 177 MLLIYGMGGIGKTTLAKKVARKAE 200 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~v~~~~~ 200 (610)
-|+|.|-.+.|||||+.++.....
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~~g 31 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCG 31 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHcC
Confidence 688999999999999988876543
No 283
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=35.90 E-value=19 Score=32.59 Aligned_cols=24 Identities=13% Similarity=0.412 Sum_probs=21.2
Q ss_pred ceEEEEEecCCchHHHHHHHHHHH
Q 007268 175 VNMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
++-|+|+|.-+.|||||...+...
T Consensus 24 lP~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 24 LPQIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp CCEEEEEECSSSSHHHHHHHHHTS
T ss_pred CCeEEEEeCCCCCHHHHHHHHhCC
Confidence 467899999999999999999864
No 284
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.78 E-value=22 Score=27.55 Aligned_cols=108 Identities=9% Similarity=0.064 Sum_probs=58.7
Q ss_pred eCCCCChHHHHHHHHHhhCCCC-C-CCChhHHHHHHHHHHhCCCeE-EEEEeCC-CCcc---cchhhcCCCCCCCCCeEE
Q 007268 213 VSESRDVRKIQGEIADKLGLKF-D-VESESGRARILYDRLKKEERI-LVILDNI-WENL---DLLDVGIPHGDDHKGCKV 285 (610)
Q Consensus 213 vs~~~~~~~~~~~i~~~l~~~~-~-~~~~~~~~~~l~~~L~~~kr~-LLVLDdv-~~~~---~~~~l~~~l~~~~~gs~I 285 (610)
+........++..++...|... . ..+..+.+..+.+....+.++ ++++|=- -..+ ....+..... ....|
T Consensus 7 VDD~~~~~~~l~~~L~~~g~~~v~~a~~g~eAl~~l~~~~~~~~~~dlillD~~mP~~dG~el~~~ir~~~~---~~~pi 83 (128)
T d2r25b1 7 VEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLG---YTSPI 83 (128)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSC---CCSCE
T ss_pred EeCCHHHHHHHHHHHHHcCCeEEEEEcChHHHHHHHHhhhhccCCCCEEEEEeCCCCCCHHHHHHHHHHccC---CCCeE
Confidence 3455566778888888888752 3 244455566666555444455 7788732 2222 2233332111 12335
Q ss_pred E-EEecccccc--cccCCccceecCCCCCHHHHHHHHHHHh
Q 007268 286 L-FTARSEEVL--SGEMESRKNFPVGFLKEEEAWSLFKKMA 323 (610)
Q Consensus 286 i-vTTR~~~va--~~~~~~~~~~~l~~L~~~ea~~Lf~~~~ 323 (610)
| +|+....-. .....+...|-.+|++.++-.+.+.+.+
T Consensus 84 I~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~ 124 (128)
T d2r25b1 84 VALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFC 124 (128)
T ss_dssp EEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHC
T ss_pred EEEECCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 4 455433211 1111234568888999888887777654
No 285
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=29.70 E-value=21 Score=33.37 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=21.9
Q ss_pred HHHHHHhcCCCceEEEEEecCCchHHHHH
Q 007268 164 NEIMDALKNPNVNMLLIYGMGGIGKTTLA 192 (610)
Q Consensus 164 ~~L~~~L~~~~~~vv~I~G~gGiGKTtLA 192 (610)
..+++.+.++....|..+|..|+|||...
T Consensus 69 ~plv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 69 KPTVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp HHHHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHhhccCceeEEecccCCCCcceee
Confidence 44555555666678899999999999664
No 286
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.43 E-value=20 Score=33.02 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=22.6
Q ss_pred HHHHHHhcCCCceEEEEEecCCchHHHHH
Q 007268 164 NEIMDALKNPNVNMLLIYGMGGIGKTTLA 192 (610)
Q Consensus 164 ~~L~~~L~~~~~~vv~I~G~gGiGKTtLA 192 (610)
..+++.+.++....|..+|..|.|||...
T Consensus 65 ~~lv~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 65 KKIVKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHcCCCcceeeecccCCCCceec
Confidence 34555555677788999999999999775
No 287
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=29.40 E-value=13 Score=32.38 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=17.4
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+-+.|+++.|.|||..+....-.
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~ 81 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLF 81 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHH
Confidence 35778899999999876655443
No 288
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=29.13 E-value=9.9 Score=27.81 Aligned_cols=22 Identities=18% Similarity=0.309 Sum_probs=16.5
Q ss_pred eEEEEEecCCchHHHHHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKKVARK 198 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~v~~~ 198 (610)
+.|.|+|+|++|.++ |+.+.+.
T Consensus 6 K~v~ViGlG~sG~s~-a~~L~~~ 27 (93)
T d2jfga1 6 KNVVIIGLGLTGLSC-VDFFLAR 27 (93)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHT
T ss_pred CEEEEEeECHHHHHH-HHHHHHC
Confidence 458899999999975 6655554
No 289
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.37 E-value=88 Score=26.32 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=14.4
Q ss_pred EEEEEecCCchHHHHHHH
Q 007268 177 MLLIYGMGGIGKTTLAKK 194 (610)
Q Consensus 177 vv~I~G~gGiGKTtLA~~ 194 (610)
-+.+.+..|+|||.-...
T Consensus 51 dvl~~a~TGsGKTlayll 68 (218)
T d2g9na1 51 DVIAQAQSGTGKTATFAI 68 (218)
T ss_dssp CEEEECCTTSSHHHHHHH
T ss_pred CEEEEcccchhhhhhhhh
Confidence 477899999999966543
No 290
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.79 E-value=18 Score=34.88 Aligned_cols=27 Identities=30% Similarity=0.185 Sum_probs=19.1
Q ss_pred CCceEEEEEecCCchHHHHH-HHHHHHh
Q 007268 173 PNVNMLLIYGMGGIGKTTLA-KKVARKA 199 (610)
Q Consensus 173 ~~~~vv~I~G~gGiGKTtLA-~~v~~~~ 199 (610)
+-.+++.|.+-+|+|||+.+ ..+.+-.
T Consensus 14 p~~g~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 14 PLQGERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp CCSSCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCchHHHHHHHHHHHHHH
Confidence 34467889999999999765 4454443
No 291
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=24.43 E-value=32 Score=31.82 Aligned_cols=30 Identities=27% Similarity=0.349 Sum_probs=22.7
Q ss_pred HHHHHHHhcCCCceEEEEEecCCchHHHHH
Q 007268 163 LNEIMDALKNPNVNMLLIYGMGGIGKTTLA 192 (610)
Q Consensus 163 ~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA 192 (610)
...+++.+.++....|..+|..|+|||...
T Consensus 69 ~~~lv~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 69 VCPILDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp HHHHHHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred HHHhHHHHhccCCceEEeeeeccccceEEe
Confidence 344556556676778889999999999765
No 292
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=23.78 E-value=1.8e+02 Score=23.84 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 162 ILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 162 ~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
..++|.+.|.. .--++.+.||||-.=|..|-.+++-.+.
T Consensus 74 ~~~~I~~~l~~-~d~vfi~AGlGGgTGtgaapviA~~ake 112 (194)
T d1w5fa1 74 SEEKIREVLQD-THMVFITAGFGGGTGTGASPVIAKIAKE 112 (194)
T ss_dssp THHHHHHHTTT-CSEEEEEEETTSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCeEEEEEecCCCcccchHHHHHHHHHH
Confidence 34566666654 3457778899998778877777776655
No 293
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=22.96 E-value=22 Score=31.85 Aligned_cols=16 Identities=25% Similarity=0.283 Sum_probs=13.9
Q ss_pred ceEEEEEecCCchHHH
Q 007268 175 VNMLLIYGMGGIGKTT 190 (610)
Q Consensus 175 ~~vv~I~G~gGiGKTt 190 (610)
.+.+.|.++.|+|||+
T Consensus 9 ~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 9 KRLTIMDLHPGAGKTK 24 (305)
T ss_dssp TCEEEECCCTTSSTTT
T ss_pred CCcEEEEECCCCCHHH
Confidence 4678899999999995
No 294
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=22.93 E-value=93 Score=24.70 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=39.2
Q ss_pred eEEEEEecCC-chHHHHHHHHHHHhccCCCCCeEEEEEeCCCCChHHHHHHHHHhhCCCCCCCChhHHHHHHHHHHh
Q 007268 176 NMLLIYGMGG-IGKTTLAKKVARKAESDKLFDQVVLSEVSESRDVRKIQGEIADKLGLKFDVESESGRARILYDRLK 251 (610)
Q Consensus 176 ~vv~I~G~gG-iGKTtLA~~v~~~~~~~~~f~~~~wv~vs~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~L~ 251 (610)
+-|+|.|-.| +|++||- +.+.... .|..+... + ..+. +.+.+.+..+....-...+......+...+.
T Consensus 2 K~I~IlGsTGSIG~~tL~--Vi~~~~d--~f~v~~Ls-a--~~N~-~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~ 70 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLD--VVRHNPE--HFRVVALV-A--GKNV-TRMVEQCLEFSPRYAVMDDEASAKLLKTMLQ 70 (151)
T ss_dssp EEEEEETTTSHHHHHHHH--HHHHCTT--TEEEEEEE-E--SSCH-HHHHHHHHHHCCSEEEESSHHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHH--HHHhCCC--CcEEEEEE-e--cCcH-HHHHHHHHHHhhcccccccHHHHHHHHHHhh
Confidence 4589999998 8999985 3344332 26554443 3 3333 4455555666655444444455556666664
No 295
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.75 E-value=60 Score=27.13 Aligned_cols=19 Identities=26% Similarity=0.265 Sum_probs=14.5
Q ss_pred eEEEEEecCCchHHHHHHH
Q 007268 176 NMLLIYGMGGIGKTTLAKK 194 (610)
Q Consensus 176 ~vv~I~G~gGiGKTtLA~~ 194 (610)
+-+.+..+.|+|||.-...
T Consensus 39 ~dvl~~A~TGsGKTla~~l 57 (207)
T d1t6na_ 39 MDVLCQAKSGMGKTAVFVL 57 (207)
T ss_dssp CCEEEECCTTSCHHHHHHH
T ss_pred CCeEEEecccccccccccc
Confidence 3478899999999865443
No 296
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=21.73 E-value=49 Score=29.43 Aligned_cols=44 Identities=14% Similarity=0.111 Sum_probs=30.7
Q ss_pred CccccHHHHHHHHHHhcCCCceEEEEEecCCchHHHHHHHHHHHhcc
Q 007268 155 AFESRASILNEIMDALKNPNVNMLLIYGMGGIGKTTLAKKVARKAES 201 (610)
Q Consensus 155 ~~vGR~~~~~~L~~~L~~~~~~vv~I~G~gGiGKTtLA~~v~~~~~~ 201 (610)
.+.-|+-..+.+..++..+ ...|+-+.|.|||-+|..+......
T Consensus 111 ~~~~rdyQ~~av~~~l~~~---~~il~~pTGsGKT~i~~~i~~~~~~ 154 (282)
T d1rifa_ 111 RIEPHWYQKDAVFEGLVNR---RRILNLPTSAGRSLIQALLARYYLE 154 (282)
T ss_dssp ECCCCHHHHHHHHHHHHHS---EEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHhcC---CceeEEEcccCccHHHHHHHHHhhh
Confidence 4566877777777777533 3455668999999888777755433
No 297
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=21.68 E-value=28 Score=32.51 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=21.4
Q ss_pred HHHHHhcCCCceEEEEEecCCchHHHHH
Q 007268 165 EIMDALKNPNVNMLLIYGMGGIGKTTLA 192 (610)
Q Consensus 165 ~L~~~L~~~~~~vv~I~G~gGiGKTtLA 192 (610)
.+++.+.++-...|..+|..|+|||...
T Consensus 104 plv~~~l~G~n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 104 PLVQTIFEGGKATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp HHHHHHHTTCEEEEEEEESTTSSHHHHH
T ss_pred HHHHHHHhccCceEEeeccCCCCCceee
Confidence 3555555666678889999999999765
No 298
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=20.63 E-value=36 Score=31.49 Aligned_cols=29 Identities=21% Similarity=0.317 Sum_probs=21.7
Q ss_pred HHHHHHhcCCCceEEEEEecCCchHHHHH
Q 007268 164 NEIMDALKNPNVNMLLIYGMGGIGKTTLA 192 (610)
Q Consensus 164 ~~L~~~L~~~~~~vv~I~G~gGiGKTtLA 192 (610)
..+++.+.++....|.-+|..|.|||...
T Consensus 76 ~plv~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 76 EEMLQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHhccCceeeeeccCCCCCceee
Confidence 34555555666678889999999999664
No 299
>d1xzpa1 a.24.25.1 (A:118-211,A:372-450) TrmE connector domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.48 E-value=1.6e+02 Score=23.43 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHhHhhHHHHh
Q 007268 38 NLKAEVDNLKSERDSLLRQVDEAERNGEEIEENVRSWLEAANKVIEEADKFTEDEAA 94 (610)
Q Consensus 38 ~~~~~i~~L~~~l~~i~~~l~~a~~~~~~~~~~v~~Wl~~lr~layd~ed~ld~~~~ 94 (610)
++...+..++++|..+.+.++..-.-..+.......-...+..+....+++++.+..
T Consensus 31 ~ls~~i~~ir~~L~~l~a~iEa~iDf~ee~~~~~~~~~~~l~~i~~~l~~li~~~~~ 87 (173)
T d1xzpa1 31 GLRDFVDSLRRELIEVLAEIRVELDYPDEIETNTGEVVTRLERIKEKLTEELKKADA 87 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcCCcccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777777777776543332211112233445666666777777766543
Done!