Your job contains 1 sequence.
>007277
MGSSKREIELEEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPT
MKGLITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHA
SGRYYMKALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIM
TLVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRG
IALDDYAEIVACICGSDDENPQHGHLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSN
GTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPR
KRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTD
KMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADF
SLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRR
SLVVAISAQNISEASGGKKKKTSKGAVKSPNIDENYSEDTPKTEIKRKHTSGKEEVWVCY
IFIVVFNNY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007277
(609 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2116787 - symbol:AT4G31880 species:3702 "Arabi... 752 1.5e-74 1
TAIR|locus:2200557 - symbol:AT1G15940 species:3702 "Arabi... 693 4.1e-68 1
TAIR|locus:2025712 - symbol:AT1G80810 species:3702 "Arabi... 622 9.0e-61 1
TAIR|locus:2169058 - symbol:AT5G47690 species:3702 "Arabi... 490 5.7e-49 3
RGD|1307094 - symbol:Pds5a "PDS5, regulator of cohesion m... 196 1.6e-13 2
UNIPROTKB|E2R7R4 - symbol:PDS5A "Uncharacterized protein"... 196 1.6e-13 2
UNIPROTKB|Q29RF7 - symbol:PDS5A "Sister chromatid cohesio... 196 2.6e-13 2
UNIPROTKB|F1NIQ3 - symbol:PDS5A "Sister chromatid cohesio... 196 8.3e-13 2
UNIPROTKB|Q5F3V3 - symbol:PDS5A "Sister chromatid cohesio... 196 8.3e-13 2
UNIPROTKB|F1P3B8 - symbol:PDS5B "Sister chromatid cohesio... 186 1.4e-12 2
ZFIN|ZDB-GENE-040426-1612 - symbol:pds5a "PDS5, regulator... 193 1.7e-12 2
UNIPROTKB|E1BKG4 - symbol:E1BKG4 "Uncharacterized protein... 183 2.9e-12 2
UNIPROTKB|I3LU95 - symbol:PDS5A "Uncharacterized protein"... 182 3.8e-12 2
SGD|S000004681 - symbol:PDS5 "Protein involved in sister ... 201 4.3e-12 3
UNIPROTKB|Q5U241 - symbol:pds5b-b "Sister chromatid cohes... 194 4.5e-12 2
UNIPROTKB|Q4KLU7 - symbol:pds5a-b "Sister chromatid cohes... 191 1.5e-11 2
POMBASE|SPAC110.02 - symbol:pds5 "cohesin-associated prot... 199 1.8e-11 2
UNIPROTKB|Q4QXM3 - symbol:pds5a-a "Sister chromatid cohes... 189 2.5e-11 2
UNIPROTKB|Q5F3U9 - symbol:PDS5B "Sister chromatid cohesio... 186 4.8e-11 2
ASPGD|ASPL0000065875 - symbol:bimD species:162425 "Emeric... 177 4.9e-11 2
FB|FBgn0260012 - symbol:pds5 species:7227 "Drosophila mel... 188 8.6e-11 1
MGI|MGI:2140945 - symbol:Pds5b "PDS5, regulator of cohesi... 186 1.8e-10 1
UNIPROTKB|F1Q0Z0 - symbol:PDS5B "Uncharacterized protein"... 186 1.8e-10 1
UNIPROTKB|Q9NTI5 - symbol:PDS5B "Sister chromatid cohesio... 186 1.8e-10 1
RGD|1310838 - symbol:Pds5b "PDS5, regulator of cohesion m... 186 1.8e-10 1
UNIPROTKB|Q6TRW4 - symbol:Pds5b "Sister chromatid cohesio... 186 1.8e-10 1
UNIPROTKB|Q498H0 - symbol:pds5b-a "Sister chromatid cohes... 182 1.8e-10 2
UNIPROTKB|F1N7G8 - symbol:PDS5B "Uncharacterized protein"... 186 1.8e-10 1
ZFIN|ZDB-GENE-091217-2 - symbol:pds5b "PDS5, regulator of... 187 2.5e-10 2
CGD|CAL0006191 - symbol:PDS5 species:5476 "Candida albica... 174 2.2e-08 2
UNIPROTKB|Q5A2J0 - symbol:PDS5 "Putative uncharacterized ... 174 2.2e-08 2
FB|FBgn0037836 - symbol:CG14692 species:7227 "Drosophila ... 141 2.6e-05 1
DICTYBASE|DDB_G0275929 - symbol:pds5 "sister chromatid co... 130 3.7e-05 3
POMBASE|SPBC1711.05 - symbol:SPBC1711.05 "nucleocytoplasm... 121 0.00041 1
FB|FBgn0053526 - symbol:PNUTS "PNUTS" species:7227 "Droso... 125 0.00051 1
DICTYBASE|DDB_G0278987 - symbol:DDB_G0278987 "Pin2-intera... 116 0.00084 1
DICTYBASE|DDB_G0291444 - symbol:DDB_G0291444 species:4468... 118 0.00086 1
>TAIR|locus:2116787 [details] [associations]
symbol:AT4G31880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA;IDA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] GO:GO:0005829 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:NOG12793 UniGene:At.31705
EMBL:BT002315 IPI:IPI00525095 RefSeq:NP_194916.2 PaxDb:Q8GUP3
PRIDE:Q8GUP3 EnsemblPlants:AT4G31880.1 GeneID:829318
KEGG:ath:AT4G31880 TAIR:At4g31880 HOGENOM:HOG000148306
InParanoid:Q8GUP3 OMA:IATEEVS PhylomeDB:Q8GUP3
ProtClustDB:CLSN2716612 Genevestigator:Q8GUP3 Uniprot:Q8GUP3
Length = 873
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 208/611 (34%), Positives = 319/611 (52%)
Query: 4 SKREIELEEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKG 63
S + ELE Q+ +AG L++PPS +DE+++ LDK+ LA VEQ+P SM++AL P MKG
Sbjct: 2 SDSDKELENQIIEAGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMKG 61
Query: 64 LITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGR 123
L+ L + SD+DV+++V +CISEITRITAPD+PYDD+ MKE F+L VS+FE+L S R
Sbjct: 62 LVGGKLFKHSDVDVKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSSR 121
Query: 124 YYMKALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLV 183
Y K +SIL+TVAKVRSC++MLDLECD L++EMFQHFLK IR +H VF++ME IMTLV
Sbjct: 122 SYAKRISILETVAKVRSCVVMLDLECDALLIEMFQHFLKAIRDHHSGNVFSSMENIMTLV 181
Query: 184 IDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIAL 243
++ESED+ ++L +L SV+K+++ +S S +L E+V + CA+KLKT L EAV+S G+ L
Sbjct: 182 LEESEDIPSEMLSPILHSVKKDDE-ISQVSRRLAEQVLSNCASKLKTYLTEAVKSSGVPL 240
Query: 244 DDYAEIVACICGSDDENPQHGHLIGSENQLAT----KEPDPPCLGEVVH----DV--DGI 293
D Y+ IVA IC Q ++ +E + + +E + E+ D D
Sbjct: 241 DKYSNIVASICEGTFSALQQDQVVANEKEDSQGHIKRETEVEKAAEISTPERTDAPKDES 300
Query: 294 SKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVK--- 350
KS SNG A +N+ SV D + + ++ E Q + + + +T++ +V+
Sbjct: 301 GKSGVSNGVA-QQNDSSVDTDSMKKQDDTGAKDEPQQLDNPRNTDLNNTTEEKPDVEHQI 359
Query: 351 SETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQD 410
E E ES+ K+ EE + S + P D V + S +
Sbjct: 360 EEKENESSSVKQADLSKDSDIKEETEPAELLDSKDVLTSPPV-----DSSVTAATSSENE 414
Query: 411 SKKEALNLTDKMLADPT----SASLKSGLPDGSHHRR-GRTKKQGSTVNQNADHNSLSVS 465
K L K D T S S+ LP+ S ++ KK+ S+ + S++
Sbjct: 415 KNKSVQILPSKTSGDETANVSSPSMAEELPEQSVPKKTANQKKKESSTEEVKPSASIATE 474
Query: 466 LSTRVEETASGSADFSLRKKPEDRSDTE--IKHRKRSKTNEEISQPPGYGVSEKEAVVPS 523
+ T+ KK S T+ + K+S + ++++ SEK+ V
Sbjct: 475 EVSEEPNTSEPQVTKKSGKKVASSSKTKPTVPPSKKSTSETKVAKQ-----SEKKVVGSD 529
Query: 524 ADKEKPLQLSVTKKRRRSLVVAISAQNISEAXXXXXXXXXXXXXXXPNIDENYS-EDTPK 582
+E KK R + + + S + + E++P
Sbjct: 530 NAQESTKPKEEKKKPGRGKAIDEESLHTSSGDNEKPAVSSGKLASKSKKEAKQTVEESPN 589
Query: 583 TEIKRKHTSGK 593
+ KRK + G+
Sbjct: 590 SNTKRKRSLGQ 600
>TAIR|locus:2200557 [details] [associations]
symbol:AT1G15940 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR016024 EMBL:CP002684 GO:GO:0005829
GO:GO:0009506 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010924 HOGENOM:HOG000015164 ProtClustDB:CLSN2679925
IPI:IPI00543267 PIR:H86293 RefSeq:NP_173046.2 UniGene:At.28119
ProteinModelPortal:Q9S9P0 PRIDE:Q9S9P0 EnsemblPlants:AT1G15940.1
GeneID:838164 KEGG:ath:AT1G15940 TAIR:At1g15940 InParanoid:Q9S9P0
OMA:METIMIT PhylomeDB:Q9S9P0 Genevestigator:Q9S9P0 Uniprot:Q9S9P0
Length = 990
Score = 693 (249.0 bits), Expect = 4.1e-68, P = 4.1e-68
Identities = 192/553 (34%), Positives = 287/553 (51%)
Query: 7 EIELEEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLIT 66
E E+ L DA LL P D ++LL+ +E LLA VEQ S S++ AL P M+ L++
Sbjct: 9 EFSKEQALTDAAENLLKPHFSTDATLSLLEVMESLLATVEQDLSSSVQKALHPPMRALVS 68
Query: 67 NDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYM 126
DLLR D DVR+SV SC++EI RITAP++PY+DE MK+ FQ+ + AFE L+ AS R Y
Sbjct: 69 ADLLRNPDSDVRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFEKLADASSRSYR 128
Query: 127 KALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDE 186
KA IL+TVAKVRS L+MLDLECD LV+EMFQ FLK+IR +HP V +METIM VIDE
Sbjct: 129 KAEVILETVAKVRSSLVMLDLECDDLVLEMFQRFLKIIRPDHPQLVLVSMETIMITVIDE 188
Query: 187 SEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALDDY 246
SE+V DLL ILL +V+K++QDVSP + L EKV + C KL+ + EA++S G +LD Y
Sbjct: 189 SEEVPMDLLEILLTTVKKDSQDVSPAALTLVEKVLSSCTCKLQPCIMEALKSSGTSLDMY 248
Query: 247 AEIVACICGSDDENPQ-HGHLIGSENQLATKEPDPPCLGEVVHD---VDGISKSVTSNGT 302
+ +V+ IC S+ Q H + +N+ K + G+VV D ++ ++ GT
Sbjct: 249 SPVVSSICQSEFATTQAHNDVKPKDNEADEKISE----GQVVPSDSLEDKLNLGLSRKGT 304
Query: 303 AASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKR 362
+ R+ + + + S+S DA+ ++G + KS PE +
Sbjct: 305 RSKRSARGGTRRANGDEKVITANEGLSESTDAETASGSTRKRGWKP-KSLMNPEEGYSFK 363
Query: 363 GRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLN----QDSKKEALNL 418
+ E G D S K +P + ++ V S S + S+K +
Sbjct: 364 TSSSKKVQEKELG-DSSLGKVAAKKVPLPSKVGQTNQSVVISLSSSGRARTGSRKRSRTK 422
Query: 419 TDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSA 478
++ D +S + + + + K+ + N + + S++ E+ +G A
Sbjct: 423 MEETDHDVSSVATQPAKKQ-TVKKTNPAKEDLTKSNVKKHEDGIKTGKSSKKEKADNGLA 481
Query: 479 DFSLRKKPEDR-----SDTEIKHRKRSKTNEE---ISQP-PGYGVSEKE---AVVPSADK 526
S +K + S ++ H K N E + P P S+K+ A P+ K
Sbjct: 482 KTSAKKPLAETMMVKPSGKKLVHSDAKKKNSEGASMDTPIPQSSKSKKKDSRATTPATKK 541
Query: 527 EKPLQLSVTKKRR 539
+ S K +R
Sbjct: 542 SEQAPKSHPKMKR 554
>TAIR|locus:2025712 [details] [associations]
symbol:AT1G80810 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
SUPFAM:SSF48371 EMBL:AC011713 IPI:IPI00846911 RefSeq:NP_001077860.1
UniGene:At.33874 ProteinModelPortal:A8MRD9 PaxDb:A8MRD9
PRIDE:A8MRD9 EnsemblPlants:AT1G80810.2 GeneID:844420
KEGG:ath:AT1G80810 TAIR:At1g80810 eggNOG:NOG241686
HOGENOM:HOG000015164 InParanoid:A8MRD9 OMA:PLDEYAP PhylomeDB:A8MRD9
ProtClustDB:CLSN2679925 ArrayExpress:A8MRD9 Genevestigator:A8MRD9
Uniprot:A8MRD9
Length = 774
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 161/430 (37%), Positives = 241/430 (56%)
Query: 53 MRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVS 112
M+ AL+P+ L++ DLL D DVR+SV SC++EI RITAP++PY D+LMKE F+L +
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60
Query: 113 AFENLSHASGRYYMKALSILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFV 172
AFE L+ AS R Y KA +LD VAKV+SCL+MLDLEC L+++MF++F K IRS+HP V
Sbjct: 61 AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120
Query: 173 FAAMETIMTLVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNL 232
F++ME IM +IDE+E VS DLL LLA+V+KENQ+VSP SW L EKV ++CA KLK +
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180
Query: 233 KEAVQSRGIALDDYAEIVACICGSDDENPQHGHLIGSENQLATKEPDPPCLGEVVHD-VD 291
EA++SRG +LD Y+ +V+ IC S P+ H + + TKE + ++ H +
Sbjct: 181 IEALKSRGTSLDMYSPVVSSICQSVFNTPKV-H-----SPVNTKEHEEKL--DLGHSRKE 232
Query: 292 GISKSVTS----NGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTS-DSL 346
+SKS + + T ++ V S++L++ + RS+S DA+ + +SL
Sbjct: 233 NLSKSSSKRPARHETRGINEKEKVRNGNKSSLLKQSLKQVRSESTDAEITGKRGRKPNSL 292
Query: 347 RNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRK---SDDKGVDC 403
N + + + KR S + +SS + KVP ++ ++
Sbjct: 293 MNPE-DYDISWLSGKRDPLKTSSNKKIQKKGSGGVSS---LGKVPAKKTPLPKENSPATS 348
Query: 404 SPSLNQDSKKEALNLTDK-----MLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNAD 458
S SL K+ + + + L+ P L S D ++ +K G++ Q
Sbjct: 349 SRSLTGSLKRSRVKMDESDYDSDSLSSPRLKKLASCFRDEEPNQED-DRKIGNSSKQTRS 407
Query: 459 HNSLSVSLST 468
N L S T
Sbjct: 408 KNGLEKSQKT 417
>TAIR|locus:2169058 [details] [associations]
symbol:AT5G47690 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA;IDA] [GO:0007067 "mitosis" evidence=RCA]
InterPro:IPR016024 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB016886 KO:K11267 eggNOG:NOG268017
OMA:NMIARRI IPI:IPI00892180 RefSeq:NP_001119390.1 UniGene:At.44744
ProteinModelPortal:B3H5K3 SMR:B3H5K3 PaxDb:B3H5K3 PRIDE:B3H5K3
EnsemblPlants:AT5G47690.3 GeneID:834820 KEGG:ath:AT5G47690
TAIR:At5g47690 HOGENOM:HOG000064635 PhylomeDB:B3H5K3
ProtClustDB:CLSN2702261 Genevestigator:B3H5K3 Uniprot:B3H5K3
Length = 1607
Score = 490 (177.5 bits), Expect = 5.7e-49, Sum P(3) = 5.7e-49
Identities = 99/224 (44%), Positives = 148/224 (66%)
Query: 11 EEQLKDAGNLLLNPPSPVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLL 70
EEQLK+ G+ L P D ++ LL + L+ +EQ+P ++ ++ P + +I ++L
Sbjct: 6 EEQLKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEIL 65
Query: 71 RRSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALS 130
D DV+L V SC+SEITRITAP++PY D +MK+ FQL VSAF L+ SG + + +
Sbjct: 66 NHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVL 125
Query: 131 ILDTVAKVRSCLLMLDLECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDV 190
IL+TVAK RSC++MLDLECD LV E+F FL V R +HP VF++M+ IM ++++ESEDV
Sbjct: 126 ILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDV 185
Query: 191 SWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKE 234
LL ILL+ + + DV + +L KV CA K+++++K+
Sbjct: 186 QEHLLLILLSKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQ 229
Score = 61 (26.5 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 36/159 (22%), Positives = 60/159 (37%)
Query: 350 KSETEPESAPRKR--GRKPNSLMNPEEGY-DHSWISSGRKIAKVPGRRKSDDKGVDCSPS 406
KS T ++ +KR G KP NP+ D +++ K + P + D S
Sbjct: 1429 KSRTSKGNSKKKRSSGSKPK---NPDGVQRDEDPVTTTPKGKRTPKKNLKQLHPKDTPKS 1485
Query: 407 LNQDSKK-EALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVS 465
L+ + +K E+ N + A P + G++ K+G D ++
Sbjct: 1486 LSLEHEKVESRNKKRRSSALPIETEYSGEAGEEKSESEGKSLKEGED-----DEEVVNKE 1540
Query: 466 LSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNE 504
+ +T S S D ++ D SDTE K E
Sbjct: 1541 EDLQEAKTES-SGDAEGKEAEHDDSDTEGKQENNEMERE 1578
Score = 47 (21.6 bits), Expect = 5.7e-49, Sum P(3) = 5.7e-49
Identities = 34/146 (23%), Positives = 60/146 (41%)
Query: 341 DTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSD-DK 399
D + RNV T S P++R + +S +P + + +S K ++ +SD DK
Sbjct: 1222 DQKGNKRNVGDATSVVSVPKRR--RSSSGHSPYK-FSNSGPKVQLKASEDELHLESDMDK 1278
Query: 400 GVDC-SPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNAD 458
V S N D +K +++ + S+ LK D + ++Q + D
Sbjct: 1279 NVSLDSHDENSDQEKMLESISPRKRKKSLSSKLKITESDWA---LTDVERQSRSAG-GGD 1334
Query: 459 HNSLSVSLSTRVEETASGSADFSLRK 484
S S S + + SG A S ++
Sbjct: 1335 SKLKSASGSMKKRKNVSGLAKCSTKE 1360
Score = 43 (20.2 bits), Expect = 5.7e-49, Sum P(3) = 5.7e-49
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 483 RKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTK 536
R K S I+ + EE S+ G + E E +KE+ LQ + T+
Sbjct: 1496 RNKKRRSSALPIETEYSGEAGEEKSESEGKSLKEGEDDEEVVNKEEDLQEAKTE 1549
Score = 41 (19.5 bits), Expect = 2.4e-48, Sum P(3) = 2.4e-48
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 390 VPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLAD 425
V G RK V S+ +D ++L++ K L D
Sbjct: 699 VEGNRKQAKYAVHALASITKDDGLKSLSVLYKRLVD 734
Score = 40 (19.1 bits), Expect = 4.9e-48, Sum P(3) = 4.9e-48
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 523 SADKEKPLQLSVTKKRRRSL 542
++D+EK L+ +KR++SL
Sbjct: 1288 NSDQEKMLESISPRKRKKSL 1307
>RGD|1307094 [details] [associations]
symbol:Pds5a "PDS5, regulator of cohesion maintenance, homolog A
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0008156 "negative
regulation of DNA replication" evidence=ISO;ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 RGD:1307094 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0000785
GO:GO:0008156 HOVERGEN:HBG108241 CTD:23244 KO:K11267
eggNOG:NOG268017 HOGENOM:HOG000230672 OrthoDB:EOG46T30N
EMBL:EF460313 IPI:IPI00364488 RefSeq:NP_001077093.1
UniGene:Rn.24482 ProteinModelPortal:A4L9P7 STRING:A4L9P7
PhosphoSite:A4L9P7 PRIDE:A4L9P7 Ensembl:ENSRNOT00000003437
GeneID:305343 KEGG:rno:305343 UCSC:RGD:1307094
GeneTree:ENSGT00390000012488 InParanoid:A4L9P7 NextBio:654401
Genevestigator:A4L9P7 Uniprot:A4L9P7
Length = 1333
Score = 196 (74.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 53/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 38 DEMIKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 96
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 97 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 156
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 157 EDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 216
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ S+ L KV K
Sbjct: 217 KNLNKQSFDLA-KVLLK 232
Score = 69 (29.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 35/149 (23%), Positives = 62/149 (41%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
SAG +T ++ N SE P + R R + + N E ++ + I V
Sbjct: 1158 SAGTETGSNI-NASSELSPSAGNRSREQSSEASETGVSENEENPVRIISVTPVKSIDTVK 1216
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNL-TDKMLADPTSASLKSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + P + +SG P S RRGR K
Sbjct: 1217 NKEINSDQSTQGNISSDRGKKRIVTAAGAENIQQKPDEKADESGPPAPSKPRRGRRPKSE 1276
Query: 451 STVNQNADHNSLSVSLSTRVEETASGSAD 479
S N + + LS +S + + A+GS +
Sbjct: 1277 SQGNATKN-DDLSKPVS-KGRKRAAGSQE 1303
Score = 37 (18.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 284 PQLEFKLKSNDGEERLAVVRLLAKLFGS 311
>UNIPROTKB|E2R7R4 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008156 "negative regulation of DNA
replication" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 CTD:23244 KO:K11267 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AAEX03002532 RefSeq:XP_851177.1
Ensembl:ENSCAFT00000025282 GeneID:479103 KEGG:cfa:479103
NextBio:20854336 Uniprot:E2R7R4
Length = 1337
Score = 196 (74.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 53/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 39 DEMIKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 97
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 98 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 157
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 158 EDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 217
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ S+ L KV K
Sbjct: 218 KNLNKQSFDLA-KVLLK 233
Score = 69 (29.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + ++ N E ++ + I V
Sbjct: 1159 STGAETGSNI-NVNSELNPSTGNRSREQSSEAVETGVSENEENPVRIISVTPVKNIDPVK 1217
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T + +SG P S RRGR K
Sbjct: 1218 NKEINSDQTTQGNISSDRGKKRSVAAAGTENIQQKTDEKVDESGPPAPSKPRRGRRPKSE 1277
Query: 451 STVN--QNADHN 460
S N +N D N
Sbjct: 1278 SQGNATKNDDIN 1289
Score = 37 (18.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 285 PQLEFKLKSNDGEERLAVVRLLAKLFGS 312
>UNIPROTKB|Q29RF7 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9606 "Homo sapiens" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008156 "negative regulation of
DNA replication" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
Reactome:REACT_115566 SUPFAM:SSF48371 Reactome:REACT_21300
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0007067 GO:GO:0000785 GO:GO:0008156 HOVERGEN:HBG108241
CTD:23244 KO:K11267 eggNOG:NOG268017 HOGENOM:HOG000230672
OrthoDB:EOG46T30N EMBL:AY550968 EMBL:AK098331 EMBL:BC041361
EMBL:BC114218 EMBL:BC126225 EMBL:AF294791 EMBL:CR749425
EMBL:AB014548 IPI:IPI00854642 IPI:IPI00854687 RefSeq:NP_001093869.1
RefSeq:NP_001093870.1 UniGene:Hs.331431 ProteinModelPortal:Q29RF7
IntAct:Q29RF7 STRING:Q29RF7 PhosphoSite:Q29RF7 DMDM:121947590
PaxDb:Q29RF7 PRIDE:Q29RF7 DNASU:23244 Ensembl:ENST00000303538
Ensembl:ENST00000503396 GeneID:23244 KEGG:hsa:23244 UCSC:uc003guv.4
UCSC:uc003guw.4 GeneCards:GC04M039824 HGNC:HGNC:29088 HPA:HPA036662
MIM:613200 neXtProt:NX_Q29RF7 PharmGKB:PA162399027
InParanoid:Q29RF7 OMA:TKDAQSP ChiTaRS:PDS5A GenomeRNAi:23244
NextBio:44916 ArrayExpress:Q29RF7 Bgee:Q29RF7 CleanEx:HS_PDS5A
Genevestigator:Q29RF7 Uniprot:Q29RF7
Length = 1337
Score = 196 (74.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 53/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 39 DEMIKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 97
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 98 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 157
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 158 EDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 217
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ S+ L KV K
Sbjct: 218 KNLNKQSFDLA-KVLLK 233
Score = 67 (28.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 32/132 (24%), Positives = 53/132 (40%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + + N E ++ + I V
Sbjct: 1159 STGTETGSNI-NVNSELNPSTGNRSREQSSEAAETGVSENEENPVRIISVTPVKNIDPVK 1217
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T + +SG P S RRGR K
Sbjct: 1218 NKEINSDQATQGNISSDRGKKRTVTAAGAENIQQKTDEKVDESGPPAPSKPRRGRRPKSE 1277
Query: 451 STVN--QNADHN 460
S N +N D N
Sbjct: 1278 SQGNATKNDDLN 1289
Score = 37 (18.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 285 PQLEFKLKSNDGEERLAVVRLLAKLFGS 312
>UNIPROTKB|F1NIQ3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008156 "negative regulation of
DNA replication" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 IPI:IPI00599274 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AADN02031215 EMBL:AADN02031216
EMBL:AADN02031217 Ensembl:ENSGALT00000023102 Uniprot:F1NIQ3
Length = 1330
Score = 196 (74.1 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 52/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 33 DEVVKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 91
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 92 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 151
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 152 EDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 211
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ ++ L KV K
Sbjct: 212 KNLNKQAFDLA-KVLLK 227
Score = 62 (26.9 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 71/291 (24%), Positives = 115/291 (39%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTA---ASRNEDS 310
+EN H + +EN T++ PD P E ++ V ++ V ++ +A A +D
Sbjct: 1036 NENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDP 1095
Query: 311 VVKDKLSNVLERCSQVER---SQSIDAKCSAG-PDTSDSLRNVKSETEPESAPRKRGRKP 366
V+ K E+ +R S+ G P + L V +P SA GR+P
Sbjct: 1096 VLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLGTVN---KPLSAT---GRRP 1149
Query: 367 NSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSP---SLNQDSKKEALNLTDKML 423
E S IS +++ G R S ++ D S S N ++ +++T
Sbjct: 1150 YIRTTGSE--TGSNISVNSELSSSAGNR-SREQSSDISETGVSENDENPVRIISVTPAKT 1206
Query: 424 ADPTSASLKSG-LPDGSHHRRG--RTKKQGSTVN--QNADHNSLSVSLSTRVEETASGSA 478
+ + S G+ RG RT T N Q A+ N+ + + +T G
Sbjct: 1207 EPVKNKEINSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGPSLAAKTRRGRP 1266
Query: 479 DFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKP 529
KPE + T +K NEE ++PP G K A +A +E P
Sbjct: 1267 P-----KPEPQGTT-------AK-NEETNKPPVRG--RKRA---AASQESP 1299
Score = 52 (23.4 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 38/222 (17%), Positives = 82/222 (36%)
Query: 302 TAASRNEDSVVKDKLSNV-LERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPR 360
T N + +K N+ L R +Q + K D + + N KS +P+
Sbjct: 1034 TKNENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPK 1093
Query: 361 KRGRKPNSLMNPEEGY--DHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNL 418
PE+ + D ++IS ++ + G+ K + L+ ++ +
Sbjct: 1094 DPVLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLGTVNKPLSATGRRPYIRT 1153
Query: 419 TDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLS-TRVE------ 471
T S + + G+ R + + V++N ++ +S++ + E
Sbjct: 1154 TGSETGSNISVNSELSSSAGNRSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKE 1213
Query: 472 ----ETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQP 509
+ G++ +K+ S TE H+K + N + + P
Sbjct: 1214 INSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGP 1255
Score = 37 (18.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 279 PQLEFKLKSNDGEERLAVVRLLAKLFGS 306
>UNIPROTKB|Q5F3V3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
HOVERGEN:HBG108241 CTD:23244 KO:K11267 EMBL:AJ851547
IPI:IPI00599274 RefSeq:NP_001012598.1 UniGene:Gga.17541
ProteinModelPortal:Q5F3V3 STRING:Q5F3V3 GeneID:422787
KEGG:gga:422787 eggNOG:NOG268017 HOGENOM:HOG000230672
InParanoid:Q5F3V3 OrthoDB:EOG46T30N NextBio:20825370 Uniprot:Q5F3V3
Length = 1330
Score = 196 (74.1 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 52/197 (26%), Positives = 101/197 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 33 DEVVKRLKMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADI 91
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 92 FRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 151
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 152 EDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 211
Query: 207 QDVSPTSWKLGEKVFTK 223
++++ ++ L KV K
Sbjct: 212 KNLNKQAFDLA-KVLLK 227
Score = 62 (26.9 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 71/291 (24%), Positives = 115/291 (39%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTA---ASRNEDS 310
+EN H + +EN T++ PD P E ++ V ++ V ++ +A A +D
Sbjct: 1036 NENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDP 1095
Query: 311 VVKDKLSNVLERCSQVER---SQSIDAKCSAG-PDTSDSLRNVKSETEPESAPRKRGRKP 366
V+ K E+ +R S+ G P + L V +P SA GR+P
Sbjct: 1096 VLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLDTVN---KPLSAT---GRRP 1149
Query: 367 NSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSP---SLNQDSKKEALNLTDKML 423
E S IS +++ G R S ++ D S S N ++ +++T
Sbjct: 1150 YIRTTGSE--TGSNISVNSELSSSAGNR-SREQSSDISETGVSENDENPVRIISVTPAKT 1206
Query: 424 ADPTSASLKSG-LPDGSHHRRG--RTKKQGSTVN--QNADHNSLSVSLSTRVEETASGSA 478
+ + S G+ RG RT T N Q A+ N+ + + +T G
Sbjct: 1207 EPVKNKEINSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGPSLAAKTRRGRP 1266
Query: 479 DFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKP 529
KPE + T +K NEE ++PP G K A +A +E P
Sbjct: 1267 P-----KPEPQGTT-------AK-NEETNKPPVRG--RKRA---AASQESP 1299
Score = 52 (23.4 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 38/222 (17%), Positives = 82/222 (36%)
Query: 302 TAASRNEDSVVKDKLSNV-LERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPR 360
T N + +K N+ L R +Q + K D + + N KS +P+
Sbjct: 1034 TKNENNSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPK 1093
Query: 361 KRGRKPNSLMNPEEGY--DHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNL 418
PE+ + D ++IS ++ + G+ K + L+ ++ +
Sbjct: 1094 DPVLPTKFFTQPEKDFSNDRNYISEETRVLLLTGKPKPTGVLDTVNKPLSATGRRPYIRT 1153
Query: 419 TDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLS-TRVE------ 471
T S + + G+ R + + V++N ++ +S++ + E
Sbjct: 1154 TGSETGSNISVNSELSSSAGNRSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKE 1213
Query: 472 ----ETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQP 509
+ G++ +K+ S TE H+K + N + + P
Sbjct: 1214 INSDQATQGNSTERGKKRTATASGTENIHQKAEENNADETGP 1255
Score = 37 (18.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 279 PQLEFKLKSNDGEERLAVVRLLAKLFGS 306
>UNIPROTKB|F1P3B8 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] InterPro:IPR016024 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488
IPI:IPI00592195 UniGene:Gga.33882 CTD:23047 OMA:AKKGPPR
EMBL:AC147444 RefSeq:NP_001012845.2 Ensembl:ENSGALT00000027571
GeneID:418910 KEGG:gga:418910 NextBio:20822038 ArrayExpress:F1P3B8
Uniprot:F1P3B8
Length = 1446
Score = 186 (70.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 71 (30.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 349 VKSETEPESAPRK--RGR--KPNSLMNP-EEGYDHSWISSGRKIAKVPGRRKSDDKGVDC 403
++SE E S P+K RGR KPN+ P EE S S +K + +++
Sbjct: 1273 IESEDEQNSPPKKGRRGRPPKPNNGGTPKEEPAAKSSKRSKKKQTSAAAVEEEEEEEERQ 1332
Query: 404 SPSLNQDSKKEALNLTDK--MLADPTSASLKSGLPDGSHHRRGRTKK 448
+ ++ Q K T + A+P+ +S +RRGR+ K
Sbjct: 1333 TENIEQKPKGRQNRSTKRTQQRAEPSESSTVESAQSTPQNRRGRSSK 1379
Score = 44 (20.5 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 24/115 (20%), Positives = 43/115 (37%)
Query: 354 EPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVP-GRRKSDDKGVDCSPSLNQDSK 412
EP + KR +K + E + I + P GR+ K ++ S
Sbjct: 1303 EPAAKSSKRSKKKQTSAAAVEEEEEEEERQTENIEQKPKGRQNRSTKRTQQRAEPSESST 1362
Query: 413 KEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLS 467
E+ T + + S K+ R GR+K+ S N++++ + S S
Sbjct: 1363 VESAQSTPQ---NRRGRSSKTPPSQQKKVRAGRSKQAASKENESSEEMDVFQSSS 1414
>ZFIN|ZDB-GENE-040426-1612 [details] [associations]
symbol:pds5a "PDS5, regulator of cohesion
maintenance, homolog A (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR016024
ZFIN:ZDB-GENE-040426-1612 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GeneTree:ENSGT00390000012488 EMBL:CR759875
IPI:IPI00829298 Ensembl:ENSDART00000126785 ArrayExpress:F1QDE7
Bgee:F1QDE7 Uniprot:F1QDE7
Length = 1321
Score = 193 (73.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 50/204 (24%), Positives = 102/204 (50%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + L L + LR + DVRL V C+++I
Sbjct: 35 DEVVKRLKLVVKTYMDMDQ-DSEEEKQQYLALALHLASEFFLRNPNKDVRLLVACCLADI 93
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +KE F + L + + +L+ +A V+S + +L
Sbjct: 94 FRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 153
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +
Sbjct: 154 EDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDTILINLIPAH 213
Query: 207 QDVSPTSWKLGEKVFTKCAAKLKT 230
++++ ++ L + + ++T
Sbjct: 214 KNLNKQAYDLARTLLKRTVQTIET 237
Score = 62 (26.9 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 31/155 (20%), Positives = 59/155 (38%)
Query: 342 TSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGV 401
TS++ N + ++P S + R +S + E ++ I+ + K + S K
Sbjct: 1161 TSETGSNASTNSQPSSPATNKSRDVSSEVGARENEENPVITKAVSVKKEEAAQPSGRKRA 1220
Query: 402 DCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPD-GSHHRRGRTKKQGSTVNQNADHN 460
+P+ D + +++ + P + G P S + K+ G+T A
Sbjct: 1221 --APA--SDGTENSVSSNPSAGSQPPLNKPRRGRPPKNSAGAATQEKEAGATTGAGAGRG 1276
Query: 461 SLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIK 495
+ S TAS D K P+ + + E K
Sbjct: 1277 RKRAAPSQDPSSTAS--TDALSDKTPKQQKEAEPK 1309
Score = 59 (25.8 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 35/128 (27%), Positives = 47/128 (36%)
Query: 294 SKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSET 353
S+ V+S A E+ V+ +S E +Q + A S G + S S
Sbjct: 1182 SRDVSSEVGARENEENPVITKAVSVKKEEAAQPSGRKRA-APASDGTENSVSSNPSAGSQ 1240
Query: 354 EPESAPRKRGRKP-NSL----MNPEEGYDH-SWISSGRKIAKVPGRRKSDDKGVDCSPSL 407
P + PR RGR P NS E G + GRK A P + S D
Sbjct: 1241 PPLNKPR-RGRPPKNSAGAATQEKEAGATTGAGAGRGRKRA-APSQDPSSTASTDALSDK 1298
Query: 408 NQDSKKEA 415
+KEA
Sbjct: 1299 TPKQQKEA 1306
Score = 47 (21.6 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 15/62 (24%), Positives = 24/62 (38%)
Query: 466 LSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQ-PPGYGVSEKEAVVPSA 524
+ T ET S ++ S P ++ ++ NEE V ++EA PS
Sbjct: 1157 IKTFTSETGSNASTNSQPSSPATNKSRDVSSEVGARENEENPVITKAVSVKKEEAAQPSG 1216
Query: 525 DK 526
K
Sbjct: 1217 RK 1218
Score = 44 (20.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 23/102 (22%), Positives = 45/102 (44%)
Query: 206 NQDVSPTSWKLGEKVFT-KCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDDENPQHG 264
N+ ++ T+ + K FT + + TN + + + + D +E+ A ++ENP
Sbjct: 1145 NKPLTVTARRPYIKTFTSETGSNASTNSQPSSPATNKSRDVSSEVGA---RENEENPVIT 1201
Query: 265 HLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASR 306
+ + + A + P DG SV+SN +A S+
Sbjct: 1202 KAVSVKKEEAAQ---PSGRKRAAPASDGTENSVSSNPSAGSQ 1240
>UNIPROTKB|E1BKG4 [details] [associations]
symbol:E1BKG4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:DAAA02017473 EMBL:DAAA02017474 EMBL:DAAA02017475
EMBL:DAAA02017476 EMBL:DAAA02017477 EMBL:DAAA02017478
EMBL:DAAA02017479 EMBL:DAAA02017480 IPI:IPI00715373
Ensembl:ENSBTAT00000023680 Uniprot:E1BKG4
Length = 1295
Score = 183 (69.5 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 50/191 (26%), Positives = 97/191 (50%)
Query: 35 LDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRITAP 94
L V +++Q S + LP L + LR + DVRL V C+++I RI AP
Sbjct: 1 LQMVVKTFMDMDQ-DSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAP 59
Query: 95 DSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDLE-CDKL 152
++PY + +K+ F + L + + +L+ +A V+S + +LE C+++
Sbjct: 60 EAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEI 119
Query: 153 VVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKENQDVSPT 212
+++F+ VI ++H V M +M+ +I E + V+ +LL +L ++ +++++
Sbjct: 120 FIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQ 179
Query: 213 SWKLGEKVFTK 223
S+ L KV K
Sbjct: 180 SFDLA-KVLLK 189
Score = 70 (29.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 43/180 (23%), Positives = 70/180 (38%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + + N E ++ + I V
Sbjct: 1117 STGAETGSNI-NVNSELNPSTGNRPREQSSEAAETGVSENEENPVRIISVTPVKNIDPVK 1175
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T +SG P S RRGR K
Sbjct: 1176 NKEINSDQSAQGNISSDRGKKRTVTAAGAENIQQKTDEKADESGPPAPSKPRRGRRPKSE 1235
Query: 451 STVN--QNADHNS-LSVSLS-TRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEI 506
S N +N D N LS V + + G + K P+ DT +K + T +I
Sbjct: 1236 SQGNATKNDDINKPLSKGRKRAAVSQESPGGLEAGNAKAPK-LQDTA---KKAAPTERQI 1291
>UNIPROTKB|I3LU95 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:FP326671 Ensembl:ENSSSCT00000029818 Uniprot:I3LU95
Length = 1291
Score = 182 (69.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 50 SRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRITAPDSPYDD-ELMKEFFQ 108
S + LP L + LR + DVRL V C+++I RI AP++PY + +K+ F
Sbjct: 13 SEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFL 72
Query: 109 LAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDLE-CDKLVVEMFQHFLKVIRSN 167
+ L + + +L+ +A V+S + +LE C+++ +++F+ VI ++
Sbjct: 73 FITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNS 132
Query: 168 HPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKENQDVSPTSWKLGEKVFTK 223
H V M +M+ +I E + V+ +LL +L ++ +++++ S+ L KV K
Sbjct: 133 HNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLA-KVLLK 187
Score = 70 (29.7 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 38/161 (23%), Positives = 63/161 (39%)
Query: 337 SAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLM-----NPEEGYDHSWISSGRKIAKVP 391
S G +T ++ NV SE P + R R + + N E ++ + I V
Sbjct: 1113 STGAETGSNI-NVNSELNPSTGNRSREQSSEAAETGVSENEENPVRIISVTPVKNIDPVK 1171
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASL-KSGLPDGSHHRRGRTKKQG 450
+ + D+ + S ++ K+ + + T + +SG P S RRGR K
Sbjct: 1172 NKEINSDQAAQGNISSDRGKKRTVTAAGAENIQQKTDEKVDESGPPAPSKPRRGRRPKSE 1231
Query: 451 STVN--QNADHNS-LSVSLS-TRVEETASGSADFSLRKKPE 487
S N +N D N LS V + + G + K P+
Sbjct: 1232 SQGNATKNDDINKPLSKGRKRAAVSQESPGGLETGNAKAPK 1272
Score = 37 (18.1 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 239 PQLEFKLKSNDGEERLAVVRLLAKLFGS 266
>SGD|S000004681 [details] [associations]
symbol:PDS5 "Protein involved in sister chromatid
condensation and cohesion" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0007129 "synapsis" evidence=IMP]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007126
"meiosis" evidence=IMP] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=ISS] [GO:0000798 "nuclear cohesin complex" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR016024 SGD:S000004681 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0005198
EMBL:Z48952 EMBL:BK006946 GO:GO:0006302 GO:GO:0000794 EMBL:Z49259
GO:GO:0007076 GO:GO:0007064 GO:GO:0007129 KO:K11267
eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OrthoDB:EOG44XNR4
PIR:S54451 RefSeq:NP_013793.1 ProteinModelPortal:Q04264 SMR:Q04264
DIP:DIP-6799N IntAct:Q04264 MINT:MINT-650430 STRING:Q04264
PaxDb:Q04264 PeptideAtlas:Q04264 EnsemblFungi:YMR076C GeneID:855099
KEGG:sce:YMR076C CYGD:YMR076c HOGENOM:HOG000248675 OMA:KIWINFT
NextBio:978417 Genevestigator:Q04264 GermOnline:YMR076C
Uniprot:Q04264
Length = 1277
Score = 201 (75.8 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 67/251 (26%), Positives = 120/251 (47%)
Query: 20 LLLNPP--SPVDEVIN---LLDKVEHL---LANVEQAPSRSMRDALLPTMKGLITNDLLR 71
L N P S D++I+ LLD+++ L LA+++Q + L L++ LL+
Sbjct: 9 LKFNSPIISTSDQLISTNELLDRLKALHEELASLDQ--DNTDLTGLDKYRDALVSRKLLK 66
Query: 72 RSDMDVRLSVTSCISEITRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALSI 131
D+ +R C+S+I R+ APD+PY D + + F+L +S FE L Y+++ +
Sbjct: 67 HKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQFEQLGDQENGYHIQQTYL 126
Query: 132 LDTVAKVRSCLLMLDL-ECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDV 190
+ + + RS +L+ DL + L++E+F F +S P +F + I+ VI E + V
Sbjct: 127 ITKLLEYRSIVLLADLPSSNNLLIELFHIFYDPNKS-FPARLFNVIGGILGEVISEFDSV 185
Query: 191 SWDLLRILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSR-GIALDDYAEI 249
++LR++ N + P G V + C ++ L + +R L Y
Sbjct: 186 PLEVLRLIFNKFLTYNPNEIPE----GLNVTSDCGYEVSLILCDTYSNRMSRHLTKYYSE 241
Query: 250 VACICGSDDEN 260
+ +DD N
Sbjct: 242 IIHEATNDDNN 252
Score = 50 (22.7 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 265 HLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVKDKLSNVLERCS 324
H + SEN+L KE +G+++ ++ T + T + S + D +V
Sbjct: 286 HELSSENELFRKEATK-LIGQILTSYSDLNFVSTHSDTFKAWI--SKIADISPDV----- 337
Query: 325 QVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKR 362
+VE ++SI + D S L ++T +S PR R
Sbjct: 338 RVEWTESIPQIIATREDISKELNQALAKTFIDSDPRVR 375
Score = 44 (20.5 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 392 GRRKSDDKGVDCSPSLNQDSKKEALNLTDKML 423
G R+SD SPS ++KK N+ K L
Sbjct: 1227 GDRESDSDDDSYSPSNKNETKKGHENIVMKKL 1258
>UNIPROTKB|Q5U241 [details] [associations]
symbol:pds5b-b "Sister chromatid cohesion protein PDS5
homolog B-B" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC086289 RefSeq:NP_001088643.2 UniGene:Xl.49057
ProteinModelPortal:Q5U241 IntAct:Q5U241 PRIDE:Q5U241 GeneID:495695
KEGG:xla:495695 CTD:495695 Xenbase:XB-GENE-6041384 Uniprot:Q5U241
Length = 1464
Score = 194 (73.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 53/228 (23%), Positives = 113/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKEQYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ ++++ VI + H V M +M+ ++ E + VS +LL +L ++ +
Sbjct: 148 EDCNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGDTVSQELLDSVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 58 (25.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 324 SQVERSQSIDAKCSA-G-----PDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYD 377
S+ + S++ID K G P SDS + + P + ++RGR P + P
Sbjct: 1335 SEEQDSENIDQKRKGRGSSKKTPQKSDSTDSALDTSRP-TPQKRRGRPPKT---PTVQQK 1390
Query: 378 HSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPT 427
S + RK+ + + + SP+L+++ E ++++A T
Sbjct: 1391 KSHVGRPRKVVSKEPESEEEMEISQNSPALSENISNEEETADEEVVAPST 1440
>UNIPROTKB|Q4KLU7 [details] [associations]
symbol:pds5a-b "Sister chromatid cohesion protein PDS5
homolog A-B" species:8355 "Xenopus laevis" [GO:0008156 "negative
regulation of DNA replication" evidence=ISS] InterPro:IPR016024
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
UniGene:Xl.76790 Xenbase:XB-GENE-5812802 HOVERGEN:HBG108241
EMBL:BC098992 RefSeq:NP_001090063.1 ProteinModelPortal:Q4KLU7
PRIDE:Q4KLU7 GeneID:735137 KEGG:xla:735137 CTD:23244 KO:K11267
Uniprot:Q4KLU7
Length = 1323
Score = 191 (72.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 52/201 (25%), Positives = 102/201 (50%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L ++ LR + DVRL V C+++I
Sbjct: 31 DEVVKRLKMVVKTFMDMDQ-DSEEEKQQYLPLALHLSSDFFLRNPNKDVRLLVACCLADI 89
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +KE F + L + + +L+ +A V+S + +L
Sbjct: 90 FRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 149
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ + E + V+ + L +L ++ +
Sbjct: 150 EDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQLDSILINLISAH 209
Query: 207 QDVSPTSWKLGEKVFTKCAAK 227
++++ ++ L KV K A+
Sbjct: 210 KNLNKQAFDLA-KVLLKRTAQ 229
Score = 55 (24.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 63/293 (21%), Positives = 111/293 (37%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVK 313
+EN H + EN T++ PD P E + V ++ V N +A +E S K
Sbjct: 1034 NENNSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCDVALCVVYNKSAPCHSESS--K 1091
Query: 314 DKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPE--------SAP-RKRGR 364
D VL + + +K +D RN+ +P+ + P GR
Sbjct: 1092 DP---VLPLTFFTQPDKDFSSKSYI----TDEARNLLLTGKPKPMTVLGMVNKPLNATGR 1144
Query: 365 KPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLA 424
+P S E ++ I+S A V R+ S+ + S + + ++
Sbjct: 1145 RPYSRSTGSEISNNVSINS-ESDASVANRQSSEVPEIGVSENDENPVRLISVPPAKTETV 1203
Query: 425 DPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADFSLRK 484
+L P + RG KK+ S + A+ N S +V+ ++ R
Sbjct: 1204 KNKEVNLDQTAPSNTGTERG--KKR-SAASAGAE-NIRKESEEKKVDNISATPTPKPRRG 1259
Query: 485 KPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKK 537
+P +S+++ K N+E S+P G G A S+ ++ V K+
Sbjct: 1260 RPP-KSESQGSAAK----NDETSKPSGRGRKRAAANQESSGAQEAANAKVPKQ 1307
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 277 PQLEFKLKSNDGEERLAVVRLLAKLFGS 304
>POMBASE|SPAC110.02 [details] [associations]
symbol:pds5 "cohesin-associated protein Pds5"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IGI] [GO:0030892 "mitotic cohesin complex" evidence=IGI]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IMP]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IMP] [GO:0072356 "chromosome passenger complex
localization to kinetochore" evidence=IMP] [GO:2000281 "regulation
of histone H3-T3 phosphorylation" evidence=IDA] [GO:2000817
"regulation of histone H3-T3 phosphorylation involved in chromosome
passenger complex localization to kinetochore" evidence=IMP]
InterPro:IPR016024 PomBase:SPAC110.02 EMBL:CU329670 SUPFAM:SSF48371
GO:GO:0000775 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0006974 GO:GO:0000070 GO:GO:0000794
GO:GO:0071459 GO:GO:0051455 GO:GO:0007062 GO:GO:0030892 KO:K11267
eggNOG:NOG268017 EMBL:AB067651 EMBL:AF049529 PIR:T43647
RefSeq:NP_593535.1 ProteinModelPortal:Q9HFF5 IntAct:Q9HFF5
STRING:Q9HFF5 EnsemblFungi:SPAC110.02.1 GeneID:2541628
KEGG:spo:SPAC110.02 OMA:CESATMR OrthoDB:EOG44XNR4 NextBio:20802721
GO:GO:2000817 Uniprot:Q9HFF5
Length = 1205
Score = 199 (75.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 46/171 (26%), Positives = 88/171 (51%)
Query: 34 LLDKVEHLLANVEQAPSRSM-RDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEITRIT 92
+L ++ LL + ++ RD++LP + L+ N+LL D +R CI E+ R+
Sbjct: 23 ILKRLRDLLGELTSLSQDTIDRDSVLPVARSLVNNNLLHHKDKGIRSYTLCCIVELLRLC 82
Query: 93 APDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL-ECDK 151
APD+P+ +++ FQ+ + L + YY + IL++++ V+S +L++DL ++
Sbjct: 83 APDAPFTLSQLEDIFQVILKILSGLMNQESTYYPQIYEILESLSNVKSAVLIVDLPNAEE 142
Query: 152 LVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASV 202
+V +F+ F + R V M I+ +I+E + L IL A +
Sbjct: 143 FLVNIFRLFFDLARKGTTKNVEFYMLDIINQLINEINTIPAAALNILFAQL 193
Score = 45 (20.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 460 NSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEI----KHRKRSKTNEE 505
+++ +S+ ++T + A+ +K +SD + K+ KR K NE+
Sbjct: 1106 HAIRTPVSSFAKQTTNKHANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQ 1155
Score = 40 (19.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 16/92 (17%), Positives = 34/92 (36%)
Query: 489 RSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKKRRRSLVVAI-S 547
+ +++I+H R+ + Q + K+ S+ +K ++RR L +
Sbjct: 1099 KMESQIEHAIRTPVSSFAKQTTNKHANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQNPN 1158
Query: 548 AQNISEAXXXXXXXXXXXXXXXPNIDENYSED 579
+N+ E P+ E SE+
Sbjct: 1159 IRNVPERSSSRFQGIRINYSEAPSSSEEISEE 1190
>UNIPROTKB|Q4QXM3 [details] [associations]
symbol:pds5a-a "Sister chromatid cohesion protein PDS5
homolog A-A" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
EMBL:AY695731 UniGene:Xl.76790 ProteinModelPortal:Q4QXM3
IntAct:Q4QXM3 PRIDE:Q4QXM3 Xenbase:XB-GENE-5812802
HOVERGEN:HBG108241 Uniprot:Q4QXM3
Length = 1323
Score = 189 (71.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 52/201 (25%), Positives = 101/201 (50%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DEV+ L V +++Q S + LP L + LR + DVRL V C+++I
Sbjct: 31 DEVVKRLKMVVKTYMDMDQ-DSEEEKQQYLPLALHLSSEFFLRNPNKDVRLLVACCLADI 89
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +KE F + L + + +L+ +A V+S + +L
Sbjct: 90 FRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFEL 149
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C+++ +++F+ VI ++H V M +M+ + E + V+ + L +L ++ +
Sbjct: 150 EDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQLDSILINLISAH 209
Query: 207 QDVSPTSWKLGEKVFTKCAAK 227
++++ ++ L KV K A+
Sbjct: 210 KNLNKQAFDLA-KVLLKRTAQ 229
Score = 55 (24.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 59/293 (20%), Positives = 105/293 (35%)
Query: 258 DENPQHGHLIG-SENQLATKE---PDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVK 313
+EN H + EN T++ PD P E + V ++ V N +A +E S K
Sbjct: 1034 NENNSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCDVALCVVYNKSAPCHSESS--K 1091
Query: 314 DKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPE--------SAP-RKRGR 364
D VL + + +K +D RN+ +P+ + P GR
Sbjct: 1092 DP---VLPLTFFTQPDKDFSSKSYI----TDEARNLLLTGKPKPMTVLGMVNKPLNATGR 1144
Query: 365 KPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLA 424
+P S E ++ I+S A V R+ S+ + S + + ++
Sbjct: 1145 RPYSRSTGSEISNNVSINS-ESDASVANRQSSEVPEIGVSENDENPVRLISVPPAKTETV 1203
Query: 425 DPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADFSLRK 484
+L P + RG+ + S +N S EE + + +
Sbjct: 1204 KNKEVNLDQTAPSNTGTERGKKRSAASAGAENIRKES---------EEKKADNISATPTP 1254
Query: 485 KPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQLSVTKK 537
KP + + + + N+E S+P G G A S+ ++ V K+
Sbjct: 1255 KPRRGRPPKSESQGSAAKNDETSKPSGRGRKRAAANQESSGAQEAANAKVPKQ 1307
Score = 37 (18.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 581 PKTEIKRKHTSGKEEVWVCYIFIVVFNN 608
P+ E K K G+E + V + +F +
Sbjct: 277 PQLEFKLKSNDGEERLAVVRLLAKLFGS 304
>UNIPROTKB|Q5F3U9 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0051301 "cell division"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AJ851551 IPI:IPI00592195 UniGene:Gga.33882 STRING:Q5F3U9
PRIDE:Q5F3U9 InParanoid:Q5F3U9 Uniprot:Q5F3U9
Length = 1412
Score = 186 (70.5 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 56 (24.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 349 VKSETEPESAPRK--RGR--KPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCS 404
++SE E S P+K RGR KPN+ P+E AK R K
Sbjct: 1273 IESEDEQNSPPKKGRRGRPPKPNNGGTPKE----------EPAAKSSKRSKKKQTSAAAV 1322
Query: 405 PSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSV 464
++ +++ N+ K ++ ++ R GR+K+ S N++++ +
Sbjct: 1323 EEEEEEEERQTENIEQKPKGRQNRSTKRT-----QQSRAGRSKQAASKENESSEEMDVFQ 1377
Query: 465 SLS 467
S S
Sbjct: 1378 SSS 1380
>ASPGD|ASPL0000065875 [details] [associations]
symbol:bimD species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0043935 "sexual sporulation resulting in
formation of a cellular spore" evidence=IMP] [GO:0071459 "protein
localization to chromosome, centromeric region" evidence=IEA]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IEA]
[GO:2000817 "regulation of histone H3-T3 phosphorylation involved
in chromosome passenger complex localization to kinetochore"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001304 EMBL:AACD01000127 KO:K11267
OrthoDB:EOG44XNR4 RefSeq:XP_680565.1 ProteinModelPortal:Q5AWN4
EnsemblFungi:CADANIAT00000142 GeneID:2870172 KEGG:ani:AN7296.2
HOGENOM:HOG000168219 OMA:FAITHET Uniprot:Q5AWN4
Length = 1506
Score = 177 (67.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 58/216 (26%), Positives = 105/216 (48%)
Query: 27 PVDEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCIS 86
P+ +++ L + L +EQ +++L + L T LL D VR T CI
Sbjct: 44 PIADLLQRLQTLAQELRKLEQEEIE--KESLRKVSQELATAQLLAHKDKGVRAWATCCIV 101
Query: 87 EITRITAPDSPYDDELMKEFFQLAVSAF-ENLSHASGRYYMKALSILDTVAKVRSCLLML 145
++ R+ APD+P+ +K+ F VS+ L S Y + + +L+++A+V+S +LM
Sbjct: 102 DVLRLCAPDAPFTANQLKDIFTCIVSSIIPALGDPSNPYNAQHIYVLNSLAEVKSIVLMT 161
Query: 146 DLEC-DKLVVEMFQHFLKVIRSN------HP--HFVFAAMETIMTLVIDESEDVSWDLLR 196
DL+ D L+V +F ++ + P V M ++ VIDES ++ D++
Sbjct: 162 DLDHPDTLIVPLFISCFDIVAGSAKASTGEPVAKNVEYDMTRLLVTVIDESPVLAPDVVD 221
Query: 197 ILLASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNL 232
+++A + + V K G+K T+ K +T L
Sbjct: 222 VIVAQFLRVDPRVLDGPGKKGKKPETQVDEKQETLL 257
Score = 66 (28.3 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 351 SETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQD 410
S T ++ P K+ R+ N + EEG D +S ++ + R D + P L +
Sbjct: 295 SATGTQNGPSKQARRTNLDDSDEEGEDIKELSKAHRLIRELWRA-CPDVLQNVIPQLEAE 353
Query: 411 SKKEALNLTDKMLADPTSASLKSG 434
E+++L ++LA T L SG
Sbjct: 354 LSAESVSL--RLLATQTIGDLTSG 375
Score = 56 (24.8 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 307 NEDSVVKDKLSNVLERCSQVERSQSIDAKCSAG-PDTSDSLRNVKSETEPESAPRKRGRK 365
+ED + D+L+ + + E Q+ D + + + S++ N+ E E + P ++ +
Sbjct: 1405 DEDDMEMDELNQARDDEDEGE-DQAKDIENGSDLSELSEADSNMLEEPEDDDGPSEKEDQ 1463
Query: 366 PNSLMN-PEEGYDHSWISSGRKIAKVPGR 393
P+ N ++ S + K AKVPG+
Sbjct: 1464 PDDKQNGDDDAQPASPVPVASK-AKVPGK 1491
Score = 43 (20.2 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 287 VHDVDGISKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQS 331
V D + K++ + ++++ + L+ +L RCS + ++S
Sbjct: 735 VSDYRTVIKAIKELARRLQSSNNTILHETLTTLLYRCSSIVFNRS 779
Score = 42 (19.8 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 39/189 (20%), Positives = 71/189 (37%)
Query: 347 RNVKSETEP--ESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKS-DDKGVDC 403
R S EP ++ K+ RK NS + S + G K+ K +K+ DD D
Sbjct: 1316 RKTDSTQEPSRDANAAKKARK-NSESSSRRKSGSSAV--GFKMPKRKSTKKTGDDWSSDG 1372
Query: 404 SPSLNQDSKKEALNLTDK-------MLADPTSASLKSGLPDGSHHR--RGRTKKQGSTVN 454
+ N S +++ ADP S + + + R + Q +
Sbjct: 1373 EAAGNVASSSATRRRSNRGSASRRISYADPDSDEDDMEMDELNQARDDEDEGEDQAKDIE 1432
Query: 455 QNADHNSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGV 514
+D + LS + S +EE +P+D+ + + + S S+ G
Sbjct: 1433 NGSDLSELSEADSNMLEEPEDDDGPSEKEDQPDDKQNGDDDAQPASPV-PVASKAKVPGK 1491
Query: 515 SEKEAVVPS 523
+ K+A +P+
Sbjct: 1492 AMKKATLPT 1500
Score = 42 (19.8 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 405 PSLNQDSKKEALNLTDKMLADPTS 428
P L++ S ++ L D A+P S
Sbjct: 602 PKLSRSSSSQSQRLKDSQAAEPES 625
Score = 40 (19.1 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 298 TSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDA 334
++ G+ S NE+ + LS++L + R +++A
Sbjct: 456 SAGGSGLSDNEEQTLITHLSSMLRDADERVRLAAVEA 492
>FB|FBgn0260012 [details] [associations]
symbol:pds5 species:7227 "Drosophila melanogaster"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR016024
EMBL:AE013599 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005700 GO:GO:0030717 GO:GO:0007062
KO:K11267 eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OMA:NMIARRI
EMBL:BT053744 RefSeq:NP_001246271.1 RefSeq:NP_610719.1
UniGene:Dm.4304 IntAct:A1Z8S6 STRING:A1Z8S6
EnsemblMetazoa:FBtr0087974 EnsemblMetazoa:FBtr0306062 GeneID:36286
KEGG:dme:Dmel_CG17509 UCSC:CG17509-RA CTD:36286 FlyBase:FBgn0260012
OrthoDB:EOG402V70 ChiTaRS:pds5 GenomeRNAi:36286 NextBio:797748
Uniprot:A1Z8S6
Length = 1218
Score = 188 (71.2 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 45/218 (20%), Positives = 112/218 (51%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
DE+I L + ++L ++Q ++ +P L+ + ++ DV+L + C++++
Sbjct: 20 DELIRRLKTLANVLQTMDQ--DDNLYQQYIPLALHLLDDFFMQHPSRDVQLLIACCVADV 77
Query: 89 TRITAPDSPY-DDELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
R+ AP++PY + + +K F+ + L + + +L+ +A V+S + +L
Sbjct: 78 LRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFNMCFEL 137
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E C ++ ++F K++ H V +++ +I E++++S +LL ++L ++ +
Sbjct: 138 EDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
Query: 207 QDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALD 244
+ + + +L E++ TK L++ +K +R + +D
Sbjct: 198 KSNNKFACQLTEQLLTKTGDALESTIKMFF-NRALVMD 234
>MGI|MGI:2140945 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance,
homolog B (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 MGI:MGI:2140945 GO:GO:0005634
GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267 eggNOG:NOG268017
OrthoDB:EOG46T30N GeneTree:ENSGT00390000012488 CTD:23047
EMBL:AY102267 EMBL:AK041682 EMBL:AK045159 EMBL:AK048706
EMBL:AK164853 EMBL:BC096539 EMBL:AK122414 IPI:IPI00317401
IPI:IPI00776026 IPI:IPI00845638 RefSeq:NP_780519.3 UniGene:Mm.32959
ProteinModelPortal:Q4VA53 SMR:Q4VA53 STRING:Q4VA53
PhosphoSite:Q4VA53 PaxDb:Q4VA53 PRIDE:Q4VA53
Ensembl:ENSMUST00000016569 Ensembl:ENSMUST00000110486 GeneID:100710
KEGG:mmu:100710 UCSC:uc009auh.1 UCSC:uc009aui.1 UCSC:uc009auj.1
InParanoid:Q4VA53 NextBio:354602 Bgee:Q4VA53 Genevestigator:Q4VA53
Uniprot:Q4VA53
Length = 1446
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
>UNIPROTKB|F1Q0Z0 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488 CTD:23047
OMA:AKKGPPR EMBL:AAEX03014215 RefSeq:XP_543139.3
Ensembl:ENSCAFT00000010289 GeneID:486014 KEGG:cfa:486014
Uniprot:F1Q0Z0
Length = 1447
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
>UNIPROTKB|Q9NTI5 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005524
"ATP binding" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0042127 "regulation of cell proliferation"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_115566 GO:GO:0008285 SUPFAM:SSF48371
Reactome:REACT_21300 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0008283
GO:GO:0000785 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
eggNOG:NOG268017 OrthoDB:EOG46T30N EMBL:U95825 EMBL:AB023196
EMBL:AK026889 EMBL:AL137201 EMBL:AL138820 EMBL:Z75889 EMBL:BC039256
EMBL:BC070274 IPI:IPI00240812 IPI:IPI00845253 IPI:IPI00845353
IPI:IPI00845446 IPI:IPI00845459 RefSeq:NP_055847.1
UniGene:Hs.646051 ProteinModelPortal:Q9NTI5 SMR:Q9NTI5
IntAct:Q9NTI5 STRING:Q9NTI5 PhosphoSite:Q9NTI5 DMDM:74725312
PaxDb:Q9NTI5 PRIDE:Q9NTI5 DNASU:23047 Ensembl:ENST00000315596
Ensembl:ENST00000450460 GeneID:23047 KEGG:hsa:23047 UCSC:uc001uun.3
UCSC:uc001uuo.3 UCSC:uc010abf.3 CTD:23047 GeneCards:GC13P033160
HGNC:HGNC:20418 HPA:HPA039513 HPA:HPA040015 MIM:605333
neXtProt:NX_Q9NTI5 PharmGKB:PA162399098 OMA:AKKGPPR ChiTaRS:PDS5B
GenomeRNAi:23047 NextBio:44084 ArrayExpress:Q9NTI5 Bgee:Q9NTI5
CleanEx:HS_PDS5B Genevestigator:Q9NTI5 Uniprot:Q9NTI5
Length = 1447
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
>RGD|1310838 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance, homolog B
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=ISO;ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISO;IDA] [GO:0042127 "regulation of
cell proliferation" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 RGD:1310838
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677
GO:GO:0007064 HOVERGEN:HBG108241 eggNOG:NOG268017
HOGENOM:HOG000230672 EMBL:AABR03082233 EMBL:AABR03082545
EMBL:AY388627 EMBL:AY820182 EMBL:AY820183 EMBL:AY831451
EMBL:AY831452 EMBL:AY836673 IPI:IPI00515846 IPI:IPI00562353
IPI:IPI00764370 UniGene:Rn.105768 ProteinModelPortal:Q6TRW4
STRING:Q6TRW4 PhosphoSite:Q6TRW4 PRIDE:Q6TRW4 UCSC:RGD:1310838
ArrayExpress:Q6TRW4 Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
>UNIPROTKB|Q6TRW4 [details] [associations]
symbol:Pds5b "Sister chromatid cohesion protein PDS5
homolog B" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 RGD:1310838 GO:GO:0005634 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AABR03082233 EMBL:AABR03082545 EMBL:AY388627 EMBL:AY820182
EMBL:AY820183 EMBL:AY831451 EMBL:AY831452 EMBL:AY836673
IPI:IPI00515846 IPI:IPI00562353 IPI:IPI00764370 UniGene:Rn.105768
ProteinModelPortal:Q6TRW4 STRING:Q6TRW4 PhosphoSite:Q6TRW4
PRIDE:Q6TRW4 UCSC:RGD:1310838 ArrayExpress:Q6TRW4
Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
>UNIPROTKB|Q498H0 [details] [associations]
symbol:pds5b-a "Sister chromatid cohesion protein PDS5
homolog B-A" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC100220 EMBL:AY695732 RefSeq:NP_001089658.1 UniGene:Xl.51523
ProteinModelPortal:Q498H0 IntAct:Q498H0 GeneID:734718
KEGG:xla:734718 CTD:734718 Xenbase:XB-GENE-6255297 Uniprot:Q498H0
Length = 1448
Score = 182 (69.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 52/228 (22%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKEQYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ ++ E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGDTVSQELLDSVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
Score = 55 (24.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 34/145 (23%), Positives = 54/145 (37%)
Query: 256 SDDENPQHGH---LIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVV 312
S+ E P+ G LI ++ L+ E P + AAS +E+
Sbjct: 1209 SELEKPRRGKKQSLIDQDDSLSMDELSKPAQ----EPKSRTGQRGRKRAAAASDSEEQTW 1264
Query: 313 KDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMN- 371
++K + E + E Q+ K S + S+ EP KRGRK +
Sbjct: 1265 QEK--RLKEDLLENEDEQNSPPKKGRRGRPPKSAKMAISKEEPTVTTPKRGRKKAVPVES 1322
Query: 372 -PEEGYDHSWISSGRKIAKVPGRRK 395
P + DH IS + + +RK
Sbjct: 1323 PPTDEDDHLEISEEQDFENIDQKRK 1347
>UNIPROTKB|F1N7G8 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
InterPro:IPR016024 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000785 GO:GO:0007064
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:DAAA02033076
IPI:IPI00826394 Ensembl:ENSBTAT00000015410 Uniprot:F1N7G8
Length = 1449
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 53/228 (23%), Positives = 112/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ VI + H V M +M+ +I E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHV 255
>ZFIN|ZDB-GENE-091217-2 [details] [associations]
symbol:pds5b "PDS5, regulator of cohesion
maintenance, homolog B (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 ZFIN:ZDB-GENE-091217-2
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:CR855379
EMBL:CT027778 EMBL:CU369047 IPI:IPI00501181
Ensembl:ENSDART00000087246 Uniprot:E7EXW9
Length = 1415
Score = 187 (70.9 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 52/228 (22%), Positives = 113/228 (49%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+E++ L V +++Q S ++ L L ++ L+ D DVRL V C+++I
Sbjct: 29 EEMVRRLKMVVKTFMDMDQ-DSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADI 87
Query: 89 TRITAPDSPYDD-ELMKEFFQLAVSAFENLSHASGRYYMKALSILDTVAKVRSCLLMLDL 147
RI AP++PY + +K+ F + L + + +L+ +A V+S + +L
Sbjct: 88 FRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSAQFNRYFYLLENIAWVKSYNICFEL 147
Query: 148 E-CDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILLASVRKEN 206
E +++ ++++ +VI + H V M +M+ ++ E + VS +LL +L ++ +
Sbjct: 148 EDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDLMSSIVCEGDSVSQELLDTVLVNLVPAH 207
Query: 207 QDVSPTSWKLGEKVFTKCAAKLK---TNLKEAVQSRG-IALDDYAEIV 250
++++ ++ L + + + A ++ TN V G ++ D +E V
Sbjct: 208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSVSDLSEHV 255
Score = 48 (22.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 356 ESAPRKR-GRKPNSLMNPEEGYD-------HSWISSGRKIAKVPGRRKSDDKGVDCSPSL 407
E+ P+KR GR P S + H S ++ V + +D+ VD SP +
Sbjct: 1339 ETTPQKRRGRPPKSQTAARKASGGRSRAAAHQEEESEEEMDTVQQSEEDEDESVDSSPKV 1398
Query: 408 NQD 410
+Q+
Sbjct: 1399 SQN 1401
>CGD|CAL0006191 [details] [associations]
symbol:PDS5 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0030892 "mitotic cohesin complex"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0051455
"attachment of spindle microtubules to kinetochore involved in
homologous chromosome segregation" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:2000817 "regulation
of histone H3-T3 phosphorylation involved in chromosome passenger
complex localization to kinetochore" evidence=IEA] [GO:0007064
"mitotic sister chromatid cohesion" evidence=IEA]
InterPro:IPR016024 CGD:CAL0006191 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267
eggNOG:NOG268017 RefSeq:XP_715997.1 RefSeq:XP_716056.1
STRING:Q5A2J0 GeneID:3642341 GeneID:3642402 KEGG:cal:CaO19.2216
KEGG:cal:CaO19.9761 Uniprot:Q5A2J0
Length = 1303
Score = 174 (66.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 46/172 (26%), Positives = 91/172 (52%)
Query: 30 EVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEIT 89
E+IN L + L+N++ + S+ + T L+ LL + M V+ + C+S+I
Sbjct: 35 ELINRLIALHDELSNIDDS---SVNLSNYTT--DLVNKKLLSHTSMGVQAYLCCCLSDIL 89
Query: 90 RITAPDSPYDDELMKEFFQLAVSAFENLS-HASGRYYMKALSILDTVAKVRSCLLMLDL- 147
RI AP++PY D+ + + F+L F LS +Y + + +L +A+ +S +++ DL
Sbjct: 90 RIYAPNAPYSDQQLSDVFKLFFKQFSRLSAKKDDPFYQQHVYLLKRLAEAKSTIIITDLP 149
Query: 148 ECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILL 199
+ + L+V +F F + P + + I++ V+ E+E V +L+++L
Sbjct: 150 DSESLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSEAEVVPHQILQLIL 201
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 303 AASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSL 346
A ++ + + K LS +E +S +++ K ++G D S+ +
Sbjct: 544 AINKRQQQISK-VLSTYIELSEAYNKSNTLENKDNSGTDDSNEI 586
>UNIPROTKB|Q5A2J0 [details] [associations]
symbol:PDS5 "Putative uncharacterized protein PDS5"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR016024 CGD:CAL0006191
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267 eggNOG:NOG268017
RefSeq:XP_715997.1 RefSeq:XP_716056.1 STRING:Q5A2J0 GeneID:3642341
GeneID:3642402 KEGG:cal:CaO19.2216 KEGG:cal:CaO19.9761
Uniprot:Q5A2J0
Length = 1303
Score = 174 (66.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 46/172 (26%), Positives = 91/172 (52%)
Query: 30 EVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEIT 89
E+IN L + L+N++ + S+ + T L+ LL + M V+ + C+S+I
Sbjct: 35 ELINRLIALHDELSNIDDS---SVNLSNYTT--DLVNKKLLSHTSMGVQAYLCCCLSDIL 89
Query: 90 RITAPDSPYDDELMKEFFQLAVSAFENLS-HASGRYYMKALSILDTVAKVRSCLLMLDL- 147
RI AP++PY D+ + + F+L F LS +Y + + +L +A+ +S +++ DL
Sbjct: 90 RIYAPNAPYSDQQLSDVFKLFFKQFSRLSAKKDDPFYQQHVYLLKRLAEAKSTIIITDLP 149
Query: 148 ECDKLVVEMFQHFLKVIRSNHPHFVFAAMETIMTLVIDESEDVSWDLLRILL 199
+ + L+V +F F + P + + I++ V+ E+E V +L+++L
Sbjct: 150 DSESLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSEAEVVPHQILQLIL 201
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 303 AASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSL 346
A ++ + + K LS +E +S +++ K ++G D S+ +
Sbjct: 544 AINKRQQQISK-VLSTYIELSEAYNKSNTLENKDNSGTDDSNEI 586
>FB|FBgn0037836 [details] [associations]
symbol:CG14692 species:7227 "Drosophila melanogaster"
[GO:0008603 "cAMP-dependent protein kinase regulator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0032027 "myosin light chain binding" evidence=RCA]
InterPro:IPR000048 InterPro:IPR003117 Pfam:PF00612 Pfam:PF02197
PROSITE:PS50096 SMART:SM00015 SMART:SM00394 EMBL:AE014297
GO:GO:0007165 GO:GO:0008603 eggNOG:NOG12793 SUPFAM:SSF47391
RefSeq:NP_650019.4 ProteinModelPortal:Q9VGW4 SMR:Q9VGW4
IntAct:Q9VGW4 MINT:MINT-328162 GeneID:41298 KEGG:dme:Dmel_CG14692
UCSC:CG14692-RB FlyBase:FBgn0037836 InParanoid:Q9VGW4
OrthoDB:EOG4B8GTZ GenomeRNAi:41298 NextBio:823185 Bgee:Q9VGW4
Uniprot:Q9VGW4
Length = 2743
Score = 141 (54.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 94/407 (23%), Positives = 154/407 (37%)
Query: 199 LASVRKENQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDD 258
L S + EN + +L + VF + K E++ + + ++ G +D
Sbjct: 998 LDSDQVENMKLEGEIGQL-KTVFEQSEEKTSPTKSESLHAEDRKISGKSKESLEDAGEND 1056
Query: 259 ENPQHGHLIGSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVKDKLSN 318
+ +L SE + +T + P + +D S T T+ S K+K ++
Sbjct: 1057 RSTLLENLPSSEKENSTSLDENPLPEKESTSLDEKPSSGTEKSTSLDEKSSSE-KEKSTS 1115
Query: 319 VLER-CSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYD 377
+ E+ S+ E+S S+D S+ + S SL S PE KP+S D
Sbjct: 1116 LDEKPSSEKEKSTSLDETPSSEKENSTSLDEKPS---PEKESTSLDEKPSSGTEKSTSLD 1172
Query: 378 HSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPD 437
S K + + S +K + S SLN+ E N T ++ +P+ + L +
Sbjct: 1173 EKSSSEKEKSTSLD-EKPSSEK--EKSTSLNERPSSEKENSTS-LVENPSPEKESTSLDE 1228
Query: 438 GSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGSADFSLRKKPEDRSDTEIKHR 497
G T+K S + S SL+ R S + E T +
Sbjct: 1229 KPSS--G-TEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSQDEKPSSETEKSTSLDE- 1284
Query: 498 KRSKTNEEISQPPGYGVSEKEAVV-----PSADKEKPLQL----SVTKKRRRSLVVAISA 548
K S E+ + G SEKE PS++KEK L S K+ SLV S
Sbjct: 1285 KPSSEKEKSTSLDGKPSSEKEKSTSLDENPSSEKEKSTSLNERPSSEKENSTSLVENPSP 1344
Query: 549 QNISEAXXXXXXXXXXXXXXXPNIDENYSEDTPK-TEIKRKHTSGKE 594
+ S + ++DEN S + K T + + +S KE
Sbjct: 1345 EKESTSLDEKPSSGTEKST---SLDENPSSEKEKSTSLNERPSSEKE 1388
>DICTYBASE|DDB_G0275929 [details] [associations]
symbol:pds5 "sister chromatid cohesion protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR016024 dictyBase:DDB_G0275929
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008156 KO:K11267 eggNOG:NOG268017
RefSeq:XP_643624.1 EnsemblProtists:DDB0305112 GeneID:8620211
KEGG:ddi:DDB_G0275929 InParanoid:Q552Q7 OMA:NMIARRI
ProtClustDB:CLSZ2430964 Uniprot:Q552Q7
Length = 1450
Score = 130 (50.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 66/304 (21%), Positives = 124/304 (40%)
Query: 29 DEVINLLDKVEHLLANVEQAPSRSMRDALLPTMKGLITNDLLRRSDMDVRLSVTSCISEI 88
+++I L K++ L Q R + L ++ LI ++RL + C+SEI
Sbjct: 172 EKIIKRLKKLDEYL----QDKKRGNTEGLEIVLEVLIDPKFADNKIFEIRLMTSCCLSEI 227
Query: 89 TRITAPDSPYDDELMKEFFQLAVSAFENLSHASGRYYMKALSILD--TVAKVRSCLLMLD 146
RI AP P+D ++K F+L + + + +L+ +V KV + L ++D
Sbjct: 228 FRIYAPTLPFDMVVLKVVFKLFTEQVLQGDKVDKKLFPQYFQMLERLSVIKVFALLALVD 287
Query: 147 LECDKLVVEMFQHFLKVIRSNHPHFVFAAM-ETIMTLVIDESEDVSWDLLRILLASVRKE 205
++ F+ L + + H M T++ +++ E+V L LL S+ +
Sbjct: 288 ---SSMLTPFFKDCLSRVHGDKEHQPMDIMFSTLLNTILESLEEVPTSLWNELLESLIER 344
Query: 206 NQDVSPTSWKLGEKVFTKCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDDENPQHGH 265
+ PTS + +FT ++TN + + L D E + G + Q
Sbjct: 345 EKGGVPTS----KAIFTHDL--IETNSRFLQVHFDLFLQDLLE-PEILAGGQQQQQQDSS 397
Query: 266 LI--GSENQLATKEPDPPCLGEVVHDVDGISKSVTSNGTAASRNEDSVVKDKLSNVLERC 323
L G QL K+ + L E+ + + N + ++ ++ + VL RC
Sbjct: 398 LSNNGISKQLKKKKNE--ILFEMFNILPEFIYPALQNLEFDLEDVNASIRKGAAIVLSRC 455
Query: 324 SQVE 327
E
Sbjct: 456 YSTE 459
Score = 63 (27.2 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 420 DKMLADP--TSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASGS 477
D+M D TS L S LP +R + S +QN ++N+ + + ST +E+
Sbjct: 1317 DEMSIDDEVTSIKLPSLLP-----KRFKLPPLPSITDQNNNNNNNNTN-STNNDESEK-- 1368
Query: 478 ADFSLRKKPEDRSDTEIKHRKRSKTNEE--ISQPPGYGVSEKEAVVPSADKEKPLQLSVT 535
D + K ++ +D + + ++ IS+PP VS+K A + K+K
Sbjct: 1369 -DENNNNKNDNDNDNDNDDNSTTAVPQKSIISKPPAKKVSKKAAAKQKSPKKK-----TN 1422
Query: 536 KKRRRS 541
KK+++S
Sbjct: 1423 KKKKQS 1428
Score = 51 (23.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 17/104 (16%), Positives = 39/104 (37%)
Query: 417 NLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVEETASG 476
++TD+ + + + + + K N N D+++ +V + + + +
Sbjct: 1345 SITDQNNNNNNNNTNSTNNDESEKDENNNNKNDNDNDNDNDDNSTTAVPQKSIISKPPAK 1404
Query: 477 SADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAV 520
K + K +K+S + EE+S S+ E V
Sbjct: 1405 KVSKKAAAKQKSPKKKTNKKKKQSSSEEEVSSSEEEDESQDEEV 1448
Score = 39 (18.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 582 KTEIKRKHTSGKEEV 596
KT K+K +S +EEV
Sbjct: 1420 KTNKKKKQSSSEEEV 1434
>POMBASE|SPBC1711.05 [details] [associations]
symbol:SPBC1711.05 "nucleocytoplasmic transport
chaperone Srp40 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0006605 "protein targeting"
evidence=NAS] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISM] InterPro:IPR006594 PROSITE:PS50896 SMART:SM00667
PomBase:SPBC1711.05 Pfam:PF05022 GO:GO:0006605 GO:GO:0005730
EMBL:CU329671 GO:GO:0006913 InterPro:IPR013720 Pfam:PF08513
eggNOG:NOG318801 InterPro:IPR007718 OrthoDB:EOG4M68TB
RefSeq:NP_595878.1 ProteinModelPortal:Q9P785 STRING:Q9P785
PRIDE:Q9P785 EnsemblFungi:SPBC1711.05.1 GeneID:2539687
KEGG:spo:SPBC1711.05 OMA:RKHFSRI NextBio:20800841 Uniprot:Q9P785
Length = 451
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 66/297 (22%), Positives = 114/297 (38%)
Query: 218 EKVFTKCAAKLKTNLKEAVQSRGIALDDYAEIVACICGSDDENPQHGHLIGSENQLATKE 277
+K+ K A K + G + D+ + S ++N SE++ ++++
Sbjct: 84 QKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSED 143
Query: 278 PDPPCLG---EVVHDVDGI-SKSVTSNGTAASRNEDSVVKDKLSNVLERCSQVER---SQ 330
D E +G S S +S+ + S +ED+ S+ S + S
Sbjct: 144 SDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS 203
Query: 331 SIDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKV 390
S D++ + + SDS + S S+ +S E + S SS ++
Sbjct: 204 SSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSES 263
Query: 391 PGRRKSDDKGVDCSPSLNQDSKKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQG 450
K D + S S + S + + ++ D S S S S G +
Sbjct: 264 ESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDT 323
Query: 451 ST---VNQNADHNSLSVSLSTRV-EETASGSADFSLRKKPED-RSDTEIKHRKRSKT 502
+T V+ + NS S ST V +E +S D SL++K ED S T K + +KT
Sbjct: 324 TTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKT 380
>FB|FBgn0053526 [details] [associations]
symbol:PNUTS "PNUTS" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;NAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035304 "regulation of protein dephosphorylation"
evidence=ISS;NAS] [GO:0019888 "protein phosphatase regulator
activity" evidence=ISS;NAS] [GO:0050790 "regulation of catalytic
activity" evidence=ISS] [GO:0006605 "protein targeting"
evidence=ISS] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0008157 "protein phosphatase 1 binding" evidence=IPI]
InterPro:IPR000571 InterPro:IPR017923 PROSITE:PS50103
PROSITE:PS51319 SMART:SM00356 GO:GO:0005634 GO:GO:0006911
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 Gene3D:1.20.930.10
SUPFAM:SSF47676 FlyBase:FBgn0053526 EMBL:AJ580979
ProteinModelPortal:Q70HU3 IntAct:Q70HU3 STRING:Q70HU3 PRIDE:Q70HU3
InParanoid:Q70HU3 ArrayExpress:Q70HU3 Bgee:Q70HU3 Uniprot:Q70HU3
Length = 1135
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 57/257 (22%), Positives = 102/257 (39%)
Query: 298 TSNGTAASRNE-DSVVK-DKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEP 355
T +GT + NE + + K +++L S ++S D+ +A + + + N K ++
Sbjct: 227 TDSGTQSKDNEVEHLEKGSSATHLLADASLGKKSGLDDSSSAAEVKSGEDVDNKKHKSS- 285
Query: 356 ESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKSDDKGVDCSPSLNQDSKKEA 415
+S KR K +E H SS K + S S S + + +
Sbjct: 286 KSDKSKRSEKEREKDRKKESSSHRSSSSSHKSSSSSSSSSSKSSSSKSSSSSSSSHRSSS 345
Query: 416 LNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADH-NSLSVSLSTRVEETA 474
DK A +S S S + R + GS+ + + H +S S S S+ ++
Sbjct: 346 DKYRDKDKARSSSGSSSSS--------KDRERSSGSSSSSSNKHKSSKSSSSSSSSSSSS 397
Query: 475 SGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSA-----DKEKP 529
SGS+ RK S + R+ + ++ PP S P+A D +KP
Sbjct: 398 SGSSSSKDRKSSSSTSSSSSSSRQDKDKDNKLMPPPAVAASNAAGTSPTASAKESDAQKP 457
Query: 530 LQLSVTKKRRRSLVVAI 546
+ + R+ S+ + I
Sbjct: 458 RSIPIMS-RKASISIEI 473
>DICTYBASE|DDB_G0278987 [details] [associations]
symbol:DDB_G0278987 "Pin2-interacting protein X1"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
dictyBase:DDB_G0278987 EMBL:AAFI02000026 GO:GO:0003676
eggNOG:NOG263032 RefSeq:XP_641890.1 EnsemblProtists:DDB0215282
GeneID:8621816 KEGG:ddi:DDB_G0278987 OMA:TNASHED Uniprot:Q54XG0
Length = 328
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 61/254 (24%), Positives = 106/254 (41%)
Query: 312 VKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETEPESAPRKRGRKPNSLMN 371
+ D++S S E I AK + + + +N K E E KR K NS N
Sbjct: 54 ISDRVSTSNNWESTNEAYDHILAKLNGVDEITWKKKNNKFVKE-EKITFKRTIKKNSKKN 112
Query: 372 PEEGYDHSWISSGRKIAKVPGRRKS--DDKGVDCSPSLNQDSKKEALN-LTDKMLADPTS 428
+E S S + K P +++ D CS S + S + + DK ++ TS
Sbjct: 113 KDESDSDSDSDSESESDKKPTKKQKVQSDSDSSCSDSSSSSSSSSSESEKEDKSSSNTTS 172
Query: 429 -ASLKSGLPDGSHHRRGRTKKQGST--VN----QNADHNSLSVSLSTRVEETASGSADFS 481
S K D S +K+ VN +++D +S S + +++S S+ S
Sbjct: 173 DESDKESSSDSSDSSESENEKKDKKKIVNNKKGKDSDSSSSSDDSCSSESDSSSSSSSSS 232
Query: 482 LRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQ--LSVTKKRR 539
SD++ K++ ++K + S+ S + +K++ + SV+K R
Sbjct: 233 SSSDSSSESDSDNKNKNKNKNKNKKSKESDSSSSSSSSESEEEEKKEVAKKSFSVSKTRY 292
Query: 540 RSLVVAISAQNISE 553
+ L+ A S +N SE
Sbjct: 293 QRLLRAKSVKNYSE 306
>DICTYBASE|DDB_G0291444 [details] [associations]
symbol:DDB_G0291444 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0291444 Pfam:PF05022 EMBL:AAFI02000177
InterPro:IPR007718 RefSeq:XP_635213.1 STRING:Q54EM7
EnsemblProtists:DDB0183896 GeneID:8628159 KEGG:ddi:DDB_G0291444
eggNOG:NOG140707 InParanoid:Q54EM7 OMA:TICEESS Uniprot:Q54EM7
Length = 447
Score = 118 (46.6 bits), Expect = 0.00086, P = 0.00086
Identities = 51/240 (21%), Positives = 98/240 (40%)
Query: 295 KSVTSNGTAASRNEDSVVKDKLSNVLERCSQVERSQSIDAKCSAGPDTSDSLRNVKSETE 354
KS + ++ S D S+ + + E+ +D K +S+S S +E
Sbjct: 71 KSSKKHKVEKDSSDSSDSSDSESDSSDSEDEKEKEMKVDKKTEDSSSSSESDTESSSSSE 130
Query: 355 PESAPRKRGRKPNSLMNPEEGYDHSWISSGRKIAKVPGRRKS---DDKGVDCSPSLNQDS 411
E +K +S + E D S S + ++ +S D+K + S S + +S
Sbjct: 131 SEDEKKKEKESDDSSSSESES-DSSSSESESESSESSSSSESESEDEKKKESSDSSDSES 189
Query: 412 KKEALNLTDKMLADPTSASLKSGLPDGSHHRRGRTKKQGSTVNQNADHNSLSVSLSTRVE 471
+ E + +D +S+ +S S + KK S+ + +++ S S S S +
Sbjct: 190 EDEKKKKVES--SDSSSSESESSDSSDSESEDEKKKKVESSDSSSSESESSSSSSSDSSD 247
Query: 472 ETASGSADFSLRKKPEDRSDTEIKHRKRSKTNEEISQPPGYGVSEKEAVVPSADKEKPLQ 531
+ S S D +KK E SD E S+ +++ +K+ +K+KP++
Sbjct: 248 SSDSESED-EKKKKVEKSSDKETSSESESEDSDDEKDKKKSKKEDKKENKKQEEKKKPIE 306
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.358 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 609 594 0.00084 120 3 11 23 0.47 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 618 (66 KB)
Total size of DFA: 313 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.76u 0.11s 67.87t Elapsed: 00:00:40
Total cpu time: 67.77u 0.11s 67.88t Elapsed: 00:00:40
Start: Mon May 20 14:53:56 2013 End: Mon May 20 14:54:36 2013