BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007278
(609 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6W7G9|ATPB_KINRD ATP synthase subunit beta OS=Kineococcus radiotolerans (strain ATCC
BAA-149 / DSM 14245 / SRS30216) GN=atpD PE=3 SV=1
Length = 486
Score = 40.0 bits (92), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 82/216 (37%), Gaps = 54/216 (25%)
Query: 340 KGVAHFDNLEGLPLSSNVGAAGLGLVLNNLGLSTRARLCLCAAGELEKQKR-------RN 392
+G A D G P+S VG A LG V N +G L L +LE +R N
Sbjct: 83 RGAAVVDT--GAPISVPVGNATLGHVFNAIGEC----LNLEEGEQLEVHERWPIHRKAPN 136
Query: 393 QDKINKKKTDIEKGLLALEGYKTRCEAGRVSYYDALKLSKD------------------- 433
D++ + T E G+ ++ + G++ + + K
Sbjct: 137 FDQLESRTTMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSV 196
Query: 434 -------TDDFNANVRRLELAGIFDEIMEMLKRYELPDEFEGHREWINIGTRYRRIVEPL 486
T + N + + AG+FD+ + + + P GTR R + L
Sbjct: 197 FAGVGERTREGNDLIGEMAEAGVFDKTALVFGQMDEPP-----------GTRLRVALSAL 245
Query: 487 DIANYYRHLKNEDTGPYMKRGRPKRYRYTQRWLEYA 522
+A Y+R ++N+D ++ +R+TQ E +
Sbjct: 246 TMAEYFRDVQNQDVLLFID----NIFRFTQAGSEVS 277
>sp|O64468|GDL36_ARATH GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050
PE=3 SV=1
Length = 349
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 3 SERLGEVISMKEEVIKKACSIAMKAHKLPEKQL--YLVEKNRGSSDVI--FSFPGSWTIS 58
S+ LGE+IS K++ IK S+ M A K+PE++L L N GS+D + + P + +
Sbjct: 120 SQHLGEIISFKKQ-IKNHRSMIMTA-KVPEEKLNKCLYTINIGSNDYLNNYFMPAPYMTN 177
Query: 59 DWFSRSPFGEKMIDPHPPQFASLRSIGNDQVAT 91
FS + + +I + SL +G +VA
Sbjct: 178 KKFSFDEYADSLIRSYRSYLKSLYVLGARKVAV 210
>sp|Q9SJI7|PLA20_ARATH Phospholipase A1-IIdelta OS=Arabidopsis thaliana GN=At2g42690 PE=1
SV=1
Length = 412
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 103 ILPQLQNEVVKAVAERKQIVFTGHSSAGPIAVLMTVWFLENWENFIKSDPSTSRMPPICV 162
+L +++ ++K E+ IV TGHS AVL EN S+ +P +
Sbjct: 214 LLAKIKELLLKYKDEKPSIVLTGHSLGATEAVLAAYDIAEN--------GSSDDVPVTAI 265
Query: 163 TFGSPLVGDFIINHALRRESWSH---YFIHFVMRYDIVPRVLLAPLSSLEPELKTILD 217
FG P VG N R E SH +H D++ R L ++ + ++D
Sbjct: 266 VFGCPQVG----NKEFRDEVMSHKNLKILHVRNTIDLLTRYPGGLLGYVDIGINFVID 319
>sp|A2WT96|PLA2_ORYSI Phospholipase A1-II 2 OS=Oryza sativa subsp. indica GN=OsI_03084
PE=2 SV=2
Length = 403
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 15/151 (9%)
Query: 43 GSSDVIFSFPGSWTISDWFSR------------SPFGEKMIDPHPPQFASLRSIGNDQVA 90
G D++ ++ G+ +W + P G DP + DQ +
Sbjct: 124 GRRDIVVAWRGTQRALEWVADLKLAPASAAGILGPEGADGTDPSVHRGYLSLYTSEDQCS 183
Query: 91 TVNEAFLTRFQAILPQLQNEVVKAVAERKQIVFTGHSSAGPIAVLMTVWFLENWENFIKS 150
+N+ R Q +L ++ + K E I GHS +A L N N
Sbjct: 184 ELNKQS-ARMQ-VLTEIARLMDKYKDEETSITVIGHSLGATLATLNAADIAANSYNTSSL 241
Query: 151 DPST-SRMPPICVTFGSPLVGDFIINHALRR 180
PS +R P V FGSP GD A R
Sbjct: 242 SPSGETRAPVTAVVFGSPRTGDRGFRDAFHR 272
>sp|Q0JKT4|PLA2_ORYSJ Phospholipase A1-II 2 OS=Oryza sativa subsp. japonica
GN=Os01g0651200 PE=2 SV=1
Length = 408
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 15/151 (9%)
Query: 43 GSSDVIFSFPGSWTISDWFSR------------SPFGEKMIDPHPPQFASLRSIGNDQVA 90
G D++ ++ G+ +W + P G DP + DQ +
Sbjct: 129 GRRDIVVAWRGTQRALEWVADLKLAPASAAGILGPEGADGTDPSVHRGYLSLYTSEDQCS 188
Query: 91 TVNEAFLTRFQAILPQLQNEVVKAVAERKQIVFTGHSSAGPIAVLMTVWFLENWENFIKS 150
+N+ R Q +L ++ + K E I GHS +A L N N
Sbjct: 189 ELNKQS-ARMQ-VLTEIARLMDKYKDEETSITVIGHSLGATLATLNAADIAANSYNTSSL 246
Query: 151 DPST-SRMPPICVTFGSPLVGDFIINHALRR 180
PS +R P V FGSP GD A R
Sbjct: 247 SPSGETRAPVTAVVFGSPRTGDRGFRDAFHR 277
>sp|Q86YC2|PALB2_HUMAN Partner and localizer of BRCA2 OS=Homo sapiens GN=PALB2 PE=1 SV=1
Length = 1186
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 391 RNQDKINKKKTDIEKGLLALEGYKTRCEA-GRVSYYDALKLSKDTDDFNANVRRLELAGI 449
R+++++ K EK + ++G K+R + +S+ ++ LS D D F A R + +
Sbjct: 541 RSKEEVTSHKYQHEKLFIQVKGKKSRHQKEDSLSWSNSAYLSLDDDAFTAPFHRDGMLSL 600
Query: 450 FDEIMEMLK--RYELPDEFEGHREWINIGTRYRRIVEPLDIANY-YRHLKNEDTGPYMKR 506
+++ L ++LPDE G + + + + VEP + + RHLK E + + +
Sbjct: 601 -KQLLSFLSITDFQLPDEDFGPLKLEKVKSCSEKPVEPFESKMFGERHLK-EGSCIFPEE 658
Query: 507 GRPKRYRYTQRWLEYALKISAGSS 530
PKR LE L + G S
Sbjct: 659 LSPKRMDTEMEDLEEDLIVLPGKS 682
>sp|Q3EBR6|PLA16_ARATH Phospholipase A1-Igamma2, chloroplastic OS=Arabidopsis thaliana
GN=At2g30550 PE=1 SV=2
Length = 529
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 27/207 (13%)
Query: 40 KNR-GSSDVIFSFPGSWTISDWFSR-----SPFGEKMI---DPHPPQFASLRSIGNDQVA 90
+NR G D+ ++ G+ T +W + P E I DP + + D+
Sbjct: 219 RNRLGRRDIAIAWRGTVTKLEWIADLKDYLKPVTENKIRCPDPAVKVESGFLDLYTDKDT 278
Query: 91 TVNEAFLTRFQAILPQLQNEVVKAVAERKQ-------IVFTGHSSAGPIAVLMTVWFLEN 143
T RF A Q+ EV + V E I TGHS G +A+L E
Sbjct: 279 TCK---FARFSA-REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEM 334
Query: 144 WENFIKSDPSTSRMPPICVTFGSPLVGDFIINHALRRESWSHYFIHFVMRYDIVPRVLLA 203
N K +P +T+G P VG+ + R E + V +D+VP+
Sbjct: 335 RLNRSKKGKV---IPVTVLTYGGPRVGN--VRFRERMEELGVKVMRVVNVHDVVPKSPGL 389
Query: 204 PLSSLEPE-LKTILDFLNPKCTIHIQE 229
L+ P L I + L P C H+ E
Sbjct: 390 FLNESRPHALMKIAEGL-PWCYSHVGE 415
>sp|A8G5Y9|PNP_PROM2 Polyribonucleotide nucleotidyltransferase OS=Prochlorococcus
marinus (strain MIT 9215) GN=pnp PE=3 SV=1
Length = 721
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 287 GDRELVVMKNPDAVLQILFYSSQLSSE--VEGPEIALRSVKDHFNYQSE-LQNLETKGVA 343
GD ++VV +PD ++ I ++QLS + +E + +V + Q + L++L K +
Sbjct: 171 GDLDIVVAGSPDGIVMIEAGANQLSEQDTIEAIDFGYEAVTELIKSQEDLLKDLGIKQIK 230
Query: 344 HFDNLEG--LP--LSSNVGAAGLGLVLNNLGLSTRARLCLCAAGELEKQKRRNQDKINKK 399
D E LP L N A + LVL S R ELEK K Q KI+
Sbjct: 231 PSDPEEDKTLPSYLEKNCSKA-IDLVLKKFDQSKEERDL-----ELEKIKTETQSKIDSL 284
Query: 400 KTDIEKGLLALEGYK 414
K D E +L E K
Sbjct: 285 KDDNEVRVLTSENEK 299
>sp|Q9LNC2|PLA18_ARATH Phospholipase A1-IIalpha OS=Arabidopsis thaliana GN=At1g06250 PE=2
SV=1
Length = 423
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 106 QLQNEVVKAVA----ERKQIVFTGHSSAGPIAVLMTVWFLENWENFIKSDPSTSRMPPIC 161
Q+Q E+ + + E I FTGHS ++VL + +N I + ++P
Sbjct: 198 QVQGELKRLLELYKDEEISITFTGHSLGAVMSVLSAADLVYGKKNNININLQKKQVPITV 257
Query: 162 VTFGSPLVGD 171
FGSP +GD
Sbjct: 258 FAFGSPRIGD 267
>sp|A2BSA7|PNP_PROMS Polyribonucleotide nucleotidyltransferase OS=Prochlorococcus
marinus (strain AS9601) GN=pnp PE=3 SV=1
Length = 721
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Query: 287 GDRELVVMKNPDAVLQILFYSSQLSSE--VEGPEIALRSVKDHFNYQSE-LQNLETKGVA 343
GD ++VV +PD ++ I ++QLS + +E + +V + Q + LQ+L K +
Sbjct: 171 GDLDIVVAGSPDGIVMIEAGANQLSEQDTIEAIDFGYEAVTELIKSQEDLLQDLGIKQIK 230
Query: 344 HFDNLEGLPLSSNVG---AAGLGLVLNNLGLSTRARLCLCAAGELEKQKRRNQDKINKKK 400
+ E L S + + LVL LS R ELEK K Q KI+ K
Sbjct: 231 PSEPEEDKTLPSYLEKNCTKPIELVLKKFDLSKEERDL-----ELEKIKTETQSKIDSLK 285
Query: 401 TDIEKGLLALEGYK 414
D + +L E K
Sbjct: 286 DDNQVKVLTSENEK 299
>sp|Q9MA46|PLA12_ARATH Galactolipase DONGLE, chloroplastic OS=Arabidopsis thaliana GN=DGL
PE=1 SV=1
Length = 471
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 40 KNRGSSDVIFSFPGSWTISDWFS--RSPFGEKMIDPHPPQ--------FASLRSIGNDQV 89
K G D++ +F G+ T +W + +S +DPH P+ F L + G +
Sbjct: 192 KRLGRRDILVTFRGTVTNHEWLANLKSSLTPARLDPHNPRPDVKVESGFLGLYTSGESES 251
Query: 90 ATVNEAFLTRFQAILPQLQNEVVKAVAERKQIVFTGHSSAGPIAVLMTVWFLENWENFIK 149
E+ + + + +L N K E I GHS +A L+ E N +
Sbjct: 252 KFGLESCREQLLSEISRLMN---KHKGEEISITLAGHSMGSSLAQLLAYDIAELGMNQRR 308
Query: 150 SDPSTSRMPPICVTFGSPLVGDF 172
+ +P +F P VG+
Sbjct: 309 DEKP---VPVTVFSFAGPRVGNL 328
>sp|Q941F1|PLA15_ARATH Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana
GN=At1g06800 PE=1 SV=2
Length = 515
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 16/198 (8%)
Query: 43 GSSDVIFSFPGSWTISDWFSR--------SPFGEKMIDPHPPQFASLRSIGNDQVATVNE 94
G D+ ++ G+ T +W + S G + DP + + D+ + N
Sbjct: 208 GRRDIAIAWRGTVTRLEWIADLKDFLKPVSGNGFRCPDPAVKAESGFLDLYTDKDTSCNF 267
Query: 95 AFLTRFQAILPQLQNEVVKAVAERKQ---IVFTGHSSAGPIAVLMTVWFLENWENFIKSD 151
+ + + +L +++ V + E + I TGHS G +AVL E N +
Sbjct: 268 SKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGVNRTRKG 327
Query: 152 PSTSRMPPICVTFGSPLVGDFIINHALRRESWSHYFIHFVMRYDIVPRVLLAPLSSLEPE 211
+P T+G P VG+ I R E + V +D+V + L+ P+
Sbjct: 328 KV---IPVTAFTYGGPRVGN--IRFKERIEKLGVKVLRVVNEHDVVAKSPGLFLNERAPQ 382
Query: 212 LKTILDFLNPKCTIHIQE 229
L P C H+ E
Sbjct: 383 ALMKLAGGLPWCYSHVGE 400
>sp|Q948R1|PLA11_ARATH Phospholipase A(1) DAD1, chloroplastic OS=Arabidopsis thaliana
GN=DAD1 PE=1 SV=1
Length = 447
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 43 GSSDVIFSFPGSWTISDWFSRSPFGEKMIDPHPPQFASLRSIGNDQVATVNEAFLTRFQA 102
G DV+ SF G+ T +W + P+ P A+L G++ V FL+ + +
Sbjct: 206 GRRDVVISFRGTATCLEWLENLRATLTHL-PNGPTGANLN--GSNSGPMVESGFLSLYTS 262
Query: 103 ILPQLQNEVVKAVAERKQ--------IVFTGHSSAGPIAVLMTVWFLENWENFIKSDPST 154
+ L++ V + +A Q + TGHS IA L + + K P
Sbjct: 263 GVHSLRDMVREEIARLLQSYGDEPLSVTITGHSLGAAIATLAAY----DIKTTFKRAPMV 318
Query: 155 SRMPPICVTFGSPLVGDFIINHALRRE 181
+ ++FG P VG+ L ++
Sbjct: 319 T-----VISFGGPRVGNRCFRKLLEKQ 340
>sp|Q6C457|UTP10_YARLI U3 small nucleolar RNA-associated protein 10 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=UTP10 PE=3 SV=1
Length = 1635
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 200 VLLAPLSSLEPELKTILDFLNPKCTIHIQEPTREASALYVTVMSNASSVASHAACHLMGN 259
+L+A L+++ P L +L + P T R+ V V+ +VA C L GN
Sbjct: 913 LLVAELATVAPTL--VLHSVMPIFTFMGANTLRQDDDFSVHVIEQ--TVARIVPC-LAGN 967
Query: 260 TNKLSDTLLSFIELSPYRPFGTYVFCTGD--RELVVMKNPDAVLQILFYSSQLSSEVE 315
T+K+ L+SF+ P+ P V G+ R L DA+ +LF +Q S+E++
Sbjct: 968 TDKVDMLLVSFVTAFPHIPQHRRVKLFGELVRALDASGTKDALATLLFLFAQKSAELK 1025
>sp|O59952|LIP_THELA Lipase OS=Thermomyces lanuginosus GN=LIP PE=1 SV=1
Length = 291
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 31/158 (19%)
Query: 47 VIFSFPGSWTISDWFSRSPFGEKMIDPHPPQFASLRSIGNDQVATV--NEAFLTRFQAIL 104
++ SF GS +I +W F K I ND + ++ F + ++++
Sbjct: 98 IVLSFRGSRSIENWIGNLNFDLKEI--------------NDICSGCRGHDGFTSSWRSVA 143
Query: 105 PQLQNEVVKAVAERK--QIVFTGHSSAGPIAVLMTVWFLENWENFIKSDPSTSRMPPICV 162
L+ +V AV E ++VFTGHS G +A + +D +
Sbjct: 144 DTLRQKVEDAVREHPDYRVVFTGHSLGGALATVA------------GADLRGNGYDIDVF 191
Query: 163 TFGSPLVGDFIINHALRRESWSHYFIHFVMRYDIVPRV 200
++G+P VG+ L ++ + DIVPR+
Sbjct: 192 SYGAPRVGNRAFAEFLTVQTGGTLY-RITHTNDIVPRL 228
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 33.1 bits (74), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 511 RYRYTQRWLEYALKISAGSSGESCFWARIEDLCLRTINMGLFEDVKEEILSLEKQVEKWV 570
RY YT+R+L +I+A G + E+L T+ G D+K+ + V +W
Sbjct: 499 RYNYTERYLRS--RITAALGGRAA-----EELVFGTVTTGAENDLKQVTEIARQMVTRWG 551
Query: 571 QNRELG 576
++E+G
Sbjct: 552 MSKEVG 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,435,437
Number of Sequences: 539616
Number of extensions: 9954884
Number of successful extensions: 25992
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 25988
Number of HSP's gapped (non-prelim): 21
length of query: 609
length of database: 191,569,459
effective HSP length: 123
effective length of query: 486
effective length of database: 125,196,691
effective search space: 60845591826
effective search space used: 60845591826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)