Query 007279
Match_columns 609
No_of_seqs 232 out of 390
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 21:47:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007279.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007279hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7y_A E3 ubiquitin-protein li 97.7 0.00046 1.6E-08 62.5 13.5 124 334-464 21-153 (153)
2 2dmh_A Myoferlin; beta-sandwic 97.6 0.00089 3.1E-08 59.6 13.3 122 334-468 8-137 (140)
3 1v27_A Regulating synaptic mem 97.4 0.0016 5.3E-08 57.8 12.1 105 334-448 22-137 (141)
4 2d8k_A Synaptotagmin VII; exoc 97.3 0.0016 5.4E-08 58.3 11.2 105 335-448 28-139 (141)
5 3m7f_B E3 ubiquitin-protein li 97.3 0.0028 9.5E-08 59.1 12.8 126 334-465 9-142 (176)
6 2b3r_A Phosphatidylinositol-4- 97.3 0.0027 9.1E-08 56.8 11.9 103 335-446 22-132 (134)
7 3kwu_A MUNC13-1; calcium bindi 97.2 0.0076 2.6E-07 54.1 14.7 122 333-463 17-146 (148)
8 1rlw_A Phospholipase A2, CALB 97.2 0.0052 1.8E-07 53.5 12.8 111 335-464 5-125 (126)
9 3n5a_A Synaptotagmin-7; calciu 97.2 0.0017 5.8E-08 57.2 9.8 105 334-444 17-138 (138)
10 3f04_A Synaptotagmin-1; C2A, c 97.2 0.0024 8.1E-08 57.1 10.5 101 335-444 36-142 (143)
11 1a25_A CALB, protein kinase C 97.2 0.0026 8.9E-08 57.5 10.7 101 335-445 33-140 (149)
12 3fbk_A RGS3, RGP3, regulator o 97.1 0.0019 6.5E-08 58.8 9.8 107 335-448 29-141 (153)
13 3fdw_A Synaptotagmin-like prot 97.1 0.0012 4.1E-08 59.7 8.1 108 335-451 25-141 (148)
14 1w15_A Synaptotagmin IV; metal 97.1 0.0018 6.2E-08 58.7 9.3 105 334-445 31-153 (153)
15 2cm5_A Rabphilin-3A; protein t 97.1 0.0023 7.7E-08 59.0 10.0 106 335-447 39-162 (166)
16 2ep6_A MCTP2 protein; beta san 97.0 0.0063 2.2E-07 53.8 12.0 114 335-462 15-130 (133)
17 1wfj_A Putative elicitor-respo 97.0 0.0023 7.9E-08 56.6 9.0 117 334-465 11-131 (136)
18 1tjx_A Similar to synaptotagmi 97.0 0.0036 1.2E-07 57.2 10.1 105 334-445 26-148 (159)
19 3pyc_A E3 ubiquitin-protein li 96.9 0.0091 3.1E-07 52.6 12.1 124 333-461 5-130 (132)
20 3rdl_A Protein kinase C alpha 96.9 0.0049 1.7E-07 54.3 10.2 103 335-447 18-127 (137)
21 1rsy_A Synaptotagmin I; calciu 96.9 0.005 1.7E-07 55.9 10.5 100 335-445 44-151 (152)
22 2enp_A B/K protein; C2 type 1, 96.9 0.0044 1.5E-07 55.7 10.0 103 334-447 27-144 (147)
23 2dmg_A KIAA1228 protein; beta- 96.9 0.0035 1.2E-07 55.9 9.2 106 335-448 26-139 (142)
24 1gmi_A Protein kinase C, epsil 96.9 0.0088 3E-07 53.2 11.4 115 334-464 7-133 (136)
25 2q3x_A Regulating synaptic mem 96.9 0.0031 1E-07 58.8 8.6 105 335-448 32-143 (171)
26 2bwq_A Regulating synaptic mem 96.8 0.0064 2.2E-07 53.1 10.0 98 335-442 20-128 (129)
27 2r83_A Synaptotagmin-1; C2A-C2 96.8 0.019 6.5E-07 56.9 14.5 123 334-465 20-148 (284)
28 2fk9_A Protein kinase C, ETA t 96.8 0.0069 2.3E-07 56.8 10.4 102 334-444 30-145 (157)
29 1ugk_A Synaptotagmin IV, KIAA1 96.6 0.021 7.2E-07 50.7 12.1 105 335-447 24-136 (138)
30 2nq3_A Itchy homolog E3 ubiqui 96.6 0.011 3.7E-07 55.7 10.4 105 334-446 37-144 (173)
31 1rh8_A Piccolo protein; beta-s 96.5 0.0097 3.3E-07 52.9 9.1 106 334-447 19-141 (142)
32 2z0u_A WW domain-containing pr 96.5 0.013 4.6E-07 54.1 10.2 101 335-444 45-155 (155)
33 2chd_A Rabphilin-3A, exophilin 96.1 0.042 1.4E-06 48.9 11.0 101 335-444 31-140 (142)
34 2r83_A Synaptotagmin-1; C2A-C2 96.0 0.023 7.9E-07 56.2 9.6 105 334-445 151-273 (284)
35 1wfm_A Synaptotagmin XIII; C2 95.6 0.077 2.6E-06 47.3 10.5 101 335-447 28-135 (138)
36 1dqv_A Synaptotagmin III; beta 94.8 0.015 5.1E-07 58.5 3.5 107 334-447 153-278 (296)
37 1dqv_A Synaptotagmin III; beta 94.0 0.47 1.6E-05 47.5 12.4 121 334-465 21-150 (296)
38 2cjt_A UNC-13 homolog A, MUNC1 93.8 0.65 2.2E-05 41.4 11.7 95 334-443 6-103 (131)
39 2cjs_A UNC-13 homolog A, MUNC1 90.9 0.84 2.9E-05 42.7 8.9 83 334-430 15-100 (167)
40 3jzy_A Intersectin 2; C2 domai 90.6 0.79 2.7E-05 49.0 9.4 107 331-445 385-495 (510)
41 3l9b_A Otoferlin; C2-domain, b 89.3 2.3 8E-05 39.6 10.3 118 332-466 20-142 (144)
42 1cjy_A CPLA2, protein (cytosol 87.7 1.5 5.2E-05 50.5 9.5 101 333-445 18-127 (749)
43 1djx_A PLC-D1, phosphoinositid 85.0 5.5 0.00019 44.8 12.1 121 328-462 492-622 (624)
44 3bxj_A RAS GTPase-activating p 84.3 0.18 6.3E-06 54.8 -0.2 99 335-445 13-117 (483)
45 3nsj_A Perforin-1; pore formin 83.8 20 0.00068 39.7 15.7 123 332-476 393-518 (540)
46 3pfq_A PKC-B, PKC-beta, protei 77.1 5.7 0.0002 44.5 8.7 103 335-447 174-283 (674)
47 2gix_A Inward rectifier potass 26.6 1.4E+02 0.0047 29.0 7.1 125 478-607 8-164 (208)
48 3ohm_B 1-phosphatidylinositol- 22.4 4.7E+02 0.016 30.7 11.7 113 334-465 726-848 (885)
49 3qr0_A Phospholipase C-beta (P 20.7 4.2E+02 0.014 30.8 10.8 111 333-461 650-770 (816)
No 1
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=97.73 E-value=0.00046 Score=62.53 Aligned_cols=124 Identities=18% Similarity=0.182 Sum_probs=82.5
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccC-CCccccccceeee---eeccccceeEEEEee-ccccEEEEEEecCCCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQ-PDIFFNAKQKLTI---LSKSGMKQVASFQCE-ATGELLFELVSHSTSK 407 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q-~d~~~~~~~~~~i---ss~s~~k~~~~lqCE-~t~~lvlElr~~~~~~ 407 (609)
.+.|.|++++||+... ....+-||.++... .+.... ..+..+ +.++.|++.+.|... ....|.|||.-+..
T Consensus 21 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~-- 97 (153)
T 3b7y_A 21 IVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLT-SVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENR-- 97 (153)
T ss_dssp EEEEEEEEEESCC-------CCEEEEEEEEETTTEEEE-EEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccce-eeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCC--
Confidence 4778889999998542 12357899998652 221010 111111 456799999999887 45689999887654
Q ss_pred ccCCCCcccceeEEeecccccCCCCcc--e-EEEEEeeccCCCCCCCCCceEEEEEeecC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKL--A-VEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~L--s-~E~w~~L~~~~~~~~~~p~~lrva~S~Tp 464 (609)
+++...||.++|+++++....... . .++|+.|.+.++ .+...=.|+|.+++.|
T Consensus 98 ---~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 98 ---LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH-KSRVKGYLRLKMTYLP 153 (153)
T ss_dssp ---SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST-TCCCCSEEEEEEEECC
T ss_pred ---CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccC-CCCcceEEEEEEEEeC
Confidence 567889999999999998754321 2 259999988753 2233458888888776
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.61 E-value=0.00089 Score=59.59 Aligned_cols=122 Identities=16% Similarity=0.231 Sum_probs=83.3
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEee-----ccccEEEEEEecCCCCc
Q 007279 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTSKI 408 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqCE-----~t~~lvlElr~~~~~~l 408 (609)
.+.|.|++++||+.......+-||.++... .+ .+.+ ...=+.++.|++.+.|.+. ....|.|++..+..
T Consensus 8 ~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~-~~-~kT~-v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~--- 81 (140)
T 2dmh_A 8 MLRVIVESASNIPKTKFGKPDPIVSVIFKD-EK-KKTK-KVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET--- 81 (140)
T ss_dssp EEEEEEEEEESCCCCSSSCCCEEEEEECSS-CE-EECC-CCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC---
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEECC-Ee-EEee-eecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC---
Confidence 377888999999865323368899998552 11 1110 1111346789999999986 25788999887655
Q ss_pred cCCCCcccceeEEeecccccCCCCcceEEEEEe---eccCCCCCCCCCceEEEEEeecCCCcc
Q 007279 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFD---LVPRSGNVSSKPISLRIAVSFTIPTLA 468 (609)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~---L~~~~~~~~~~p~~lrva~S~TpPvqA 468 (609)
+++..+||.+.|++++|... -..+.|++ |...++. ...=.|+|.+++.||...
T Consensus 82 --~~~~~~lG~~~i~l~~l~~~---~~~~~w~~l~~l~~~~~~--~~~G~l~l~~~~~p~~~~ 137 (140)
T 2dmh_A 82 --IGQNKLIGTATVALKDLTGD---QSRSLPYKLISLLNEKGQ--DTGATIDLVIGYDPPSGP 137 (140)
T ss_dssp --SSSCCCCEEEEEEGGGTCSS---SCEEEEEEEEEEECTTCC--EEEEEEEEEEEECCCBSS
T ss_pred --CCCCceEEEEEEEHHHhccC---CCceeEEeeeeccCCCCC--CCCCEEEEEEEEECCCCC
Confidence 56678999999999999753 46788988 5443321 122488889999886653
No 3
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=97.41 E-value=0.0016 Score=57.83 Aligned_cols=105 Identities=15% Similarity=0.201 Sum_probs=72.5
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee-----ccccEEEEEEecC
Q 007279 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-----ATGELLFELVSHS 404 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~~-~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE-----~t~~lvlElr~~~ 404 (609)
.+.|.|++++||+.... ...+-||+++......... ..+..+ +.++.|++.+.|.+- .+..|.|++..+.
T Consensus 22 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 100 (141)
T 1v27_A 22 QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKN-KRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 100 (141)
T ss_dssp EEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSS-CCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBC
T ss_pred EEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCc-ceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECC
Confidence 36778899999986522 2358899998642111011 111222 456799999999852 3468999998765
Q ss_pred CCCccCCCC--cccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 007279 405 TSKIPMTGA--SKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (609)
Q Consensus 405 ~~~l~~~~~--sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (609)
. +++ ..+||.+.|++.++... . .+.|++|.+.+..
T Consensus 101 ~-----~~~~~~~~lG~~~i~l~~l~~~--~--~~~W~~L~~~~~g 137 (141)
T 1v27_A 101 R-----VREEESEFLGEILIELETALLD--D--EPHWYKLQTHDSG 137 (141)
T ss_dssp S-----SSSCCBCCCEEEEEEGGGCCCS--S--EEEEEECBCCSSC
T ss_pred C-----CcCCCCceEEEEEEEccccCCC--C--CCceEECcccccC
Confidence 5 333 78999999999999863 3 7899999987554
No 4
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.33 E-value=0.0016 Score=58.27 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=73.2
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCc-cccccceeeeeeccccceeEEEEee-----ccccEEEEEEecCCCC
Q 007279 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQCE-----ATGELLFELVSHSTSK 407 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~-~~~~lFVr~~~~q~d~-~~~~~~~~~iss~s~~k~~~~lqCE-----~t~~lvlElr~~~~~~ 407 (609)
+.|.|++++||+.... ...+-||.++....+. ..+.+ ...=+.++.|++.+.|..- ....|.|+|..+..
T Consensus 28 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~-v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~-- 104 (141)
T 2d8k_A 28 LTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETK-VKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR-- 104 (141)
T ss_dssp EEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECC-CCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS--
T ss_pred EEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCc-eEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC--
Confidence 6778899999986522 2357899998652221 11100 1111456799999888742 24679999887654
Q ss_pred ccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (609)
+++..+||.+.|++.++... -..+.|++|.+.+..
T Consensus 105 ---~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~~~~~ 139 (141)
T 2d8k_A 105 ---FSRNDPIGEVSIPLNKVDLT---QMQTFWKDLKPSGPS 139 (141)
T ss_dssp ---SSSCEEEEEEEEETTTSCTT---SCEEEEECCEECCCC
T ss_pred ---CCCCcEEEEEEEEhhhhcCC---CCccEEEECcCCCCC
Confidence 56778999999999999864 268999999987654
No 5
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=97.29 E-value=0.0028 Score=59.10 Aligned_cols=126 Identities=19% Similarity=0.220 Sum_probs=78.1
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCC-Cccccccceeee--eeccccceeEEEEeec-cccEEEEEEecCCCCc
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQP-DIFFNAKQKLTI--LSKSGMKQVASFQCEA-TGELLFELVSHSTSKI 408 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~-d~~~~~~~~~~i--ss~s~~k~~~~lqCE~-t~~lvlElr~~~~~~l 408 (609)
.+.|.|++++||+... ....+-||.++.... +......++-.+ +.++.|++.+.|...+ ...|.|++.-+..
T Consensus 9 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~--- 85 (176)
T 3m7f_B 9 VVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENR--- 85 (176)
T ss_dssp EEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC----
T ss_pred EEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCC---
Confidence 3677889999998542 123678999986532 111000111111 4567899999999884 4589999886544
Q ss_pred cCCCCcccceeEEeecccccCCCCcce---EEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 007279 409 PMTGASKTMGTASLSLQNFISPISKLA---VEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (609)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls---~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (609)
+.+..+||.+.|++.++......+. ...|+.|.+.++. +...=.|+|.++++|.
T Consensus 86 --~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 86 --LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHK-SRVKGYLRLKMTYLPK 142 (176)
T ss_dssp -----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTT-CCCCSEEEEEEEECC-
T ss_pred --CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCC-CccCEEEEEEEEEEeC
Confidence 4567899999999999987532211 1289999886442 2233588888888764
No 6
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=97.25 E-value=0.0027 Score=56.80 Aligned_cols=103 Identities=17% Similarity=0.333 Sum_probs=70.8
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceeee---eeccccceeEEEE-eec----cccEEEEEEecCCC
Q 007279 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQ-CEA----TGELLFELVSHSTS 406 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lq-CE~----t~~lvlElr~~~~~ 406 (609)
+.|.|++++||+.......+-||+++.. +|.--..+.+..+ +.++.|++.+.|. +.. ...|.|++.-+..
T Consensus 22 L~V~V~~a~~L~~~~~g~~DPyv~v~l~-~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~- 99 (134)
T 2b3r_A 22 LFIMVMHIKDLVTEDGADPNPYVKTYLL-PDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAES- 99 (134)
T ss_dssp EEEEEEEEECCCCTTSCCCCEEEEEEEE-SCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS-
T ss_pred EEEEEEEeeCCCCCCCCCCCeEEEEEEE-cCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCC-
Confidence 7788899999986422336889999865 2210000112222 4567899999998 652 4688899887654
Q ss_pred CccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCC
Q 007279 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRS 446 (609)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~ 446 (609)
+++..+||.++|++.++... =..+.|++|.+.+
T Consensus 100 ----~~~~~~lG~~~i~l~~l~~~---~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 100 ----LRENFFLGGITLPLKDFNLS---KETVKWYQLTAAT 132 (134)
T ss_dssp ----SSCCEEEEEEEEEGGGSCTT---SCEEEEEECBC--
T ss_pred ----CCCCcEEEEEEEEhhhccCC---CCcceeEECCCcc
Confidence 56678999999999999753 3578999998753
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=97.23 E-value=0.0076 Score=54.12 Aligned_cols=122 Identities=10% Similarity=0.235 Sum_probs=79.7
Q ss_pred EEEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEee-ccccEEEEEEecCCCCc--
Q 007279 333 VEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKI-- 408 (609)
Q Consensus 333 ~ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqCE-~t~~lvlElr~~~~~~l-- 408 (609)
-.+.|.|++++||+... ....+-||.++.. +..... ....=+.++.|++.+.|.+. +...|.|++.-+...-.
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~--~~~~kT-~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVG--KTKKRT-KTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEET--TEEEEC-CCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHH
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC--CEEEEC-CccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCcccc
Confidence 45888899999998642 2336789998862 211111 01111356789999999997 56789999887665300
Q ss_pred --c--CCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeec
Q 007279 409 --P--MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFT 463 (609)
Q Consensus 409 --~--~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~T 463 (609)
. ...+...||.+.|+++++. -..+.|++|.+.++.. ...=.|+|.++++
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~-----~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLS-----GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCC-----SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCc-----CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 0 1267889999999999983 2468999998754321 1223566666543
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=97.19 E-value=0.0052 Score=53.49 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=76.8
Q ss_pred EEEEEEeecCCCCC----cCCCCceEEEEeccCCC-ccccccceeee---eeccccceeEEEEee--ccccEEEEEEecC
Q 007279 335 VFVEIVAVKNLPED----HKDKGDLFVFFSKSQPD-IFFNAKQKLTI---LSKSGMKQVASFQCE--ATGELLFELVSHS 404 (609)
Q Consensus 335 v~l~iv~~kNl~~~----~~~~~~lFVr~~~~q~d-~~~~~~~~~~i---ss~s~~k~~~~lqCE--~t~~lvlElr~~~ 404 (609)
+.|.|++++||+.. .....+-||.++..... ... +..+ +.++.|++.+.|... ....|.|++..+.
T Consensus 5 L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~----kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRK----RTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp EEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCE----ECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred EEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceE----EccccCCCCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 67889999999862 11236889999965321 111 1222 346799999999985 3567888887765
Q ss_pred CCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeecC
Q 007279 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (609)
Q Consensus 405 ~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~Tp 464 (609)
. ++ ..+||.+.|++++|.. .-..+.|++|.+.+ -..+++.+..+|
T Consensus 81 ~-----~~-~~~iG~~~i~l~~l~~---~~~~~~~~~L~~~~------~g~i~~~le~~~ 125 (126)
T 1rlw_A 81 Y-----VM-DETLGTATFTVSSMKV---GEKKEVPFIFNQVT------EMVLEMSLEVAS 125 (126)
T ss_dssp S-----SC-CEEEEEEEEEGGGSCT---TCEEEEEEEETTTE------EEEEEEEEECCC
T ss_pred C-----CC-CceeEEEEEEHHHccC---CCcEEEEEEcCCCc------eEEEEEEEEeCC
Confidence 3 33 7799999999999974 46889999998732 255665555443
No 9
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=97.19 E-value=0.0017 Score=57.23 Aligned_cols=105 Identities=17% Similarity=0.273 Sum_probs=70.3
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee--eeccccceeEEEEeecc----ccEEEEEEecCCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCEAT----GELLFELVSHSTS 406 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i--ss~s~~k~~~~lqCE~t----~~lvlElr~~~~~ 406 (609)
.+.|.|++++||+... ....+-||.++....+......++-.+ +.++.|++.+.|.+... ..|.|++..+..
T Consensus 17 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~- 95 (138)
T 3n5a_A 17 SIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK- 95 (138)
T ss_dssp EEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS-
T ss_pred eEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC-
Confidence 3778889999998642 223688999986532221111111111 35678999999998642 478888877654
Q ss_pred CccCCCCcccceeEEeecc----------cccCCCCcceEEEEEeecc
Q 007279 407 KIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVP 444 (609)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~----------dll~~~~~Ls~E~w~~L~~ 444 (609)
+++...||.+.|+++ +|+.. |.-.+++|..|.|
T Consensus 96 ----~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~p 138 (138)
T 3n5a_A 96 ----LSRNDVIGKIYLSWKSGPGEVKHWKDMIAR-PRQPVAQWHQLKA 138 (138)
T ss_dssp ----SSCCEEEEEEEESSSSCHHHHHHHHHHHHS-TTCCEEEEEECBC
T ss_pred ----CCCCcEEEEEEEccccCChHHHHHHHHHhC-CCCeEEEEeecCC
Confidence 567789999999987 45543 5667888887764
No 10
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=97.16 E-value=0.0024 Score=57.13 Aligned_cols=101 Identities=14% Similarity=0.180 Sum_probs=70.4
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCc-cccccceeeeeeccccceeEEEEeec----cccEEEEEEecCCCCc
Q 007279 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSKI 408 (609)
Q Consensus 335 v~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~-~~~~~~~~~iss~s~~k~~~~lqCE~----t~~lvlElr~~~~~~l 408 (609)
+.|.|++++||+... ....+-||+++....+. .... ....=+.++.|++.+.|.... ...|.|++..+..
T Consensus 36 L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT-~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--- 111 (143)
T 3f04_A 36 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFET-KVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR--- 111 (143)
T ss_dssp EEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEEC-CCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---
T ss_pred EEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEEC-ccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC---
Confidence 677889999998652 22367899998642221 1110 111114567899999998763 2678888876554
Q ss_pred cCCCCcccceeEEeecccccCCCCcceEEEEEeecc
Q 007279 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (609)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~ 444 (609)
+++..+||.+.|++.++.. .-..+.|++|.|
T Consensus 112 --~~~~~~iG~~~i~l~~l~~---~~~~~~W~~L~~ 142 (143)
T 3f04_A 112 --FSKHDIIGEFKVPMNTVDF---GHVTEEWRDLQS 142 (143)
T ss_dssp --SSCCEEEEEEEEEGGGCCT---TSCEEEEEECBC
T ss_pred --CCCCceEEEEEEEHHHccC---CCCcceEEECcC
Confidence 5677899999999999864 346789999876
No 11
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=97.15 E-value=0.0026 Score=57.49 Aligned_cols=101 Identities=21% Similarity=0.264 Sum_probs=71.8
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec---cccEEEEEEecCCCC
Q 007279 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA---TGELLFELVSHSTSK 407 (609)
Q Consensus 335 v~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~---t~~lvlElr~~~~~~ 407 (609)
+.|.|++++||+... ....+-||+++......... ..+..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 33 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~-- 109 (149)
T 1a25_A 33 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSES-KQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-- 109 (149)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSS-CEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcc-eEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC--
Confidence 788899999998552 22368899998653111111 111111 4567999999999873 3578899887654
Q ss_pred ccCCCCcccceeEEeecccccCCCCcceEEEEEeeccC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~ 445 (609)
+++..+||.+.|++.+|... ..+.|++|.+.
T Consensus 110 ---~~~~~~iG~~~i~l~~l~~~----~~~~W~~L~~~ 140 (149)
T 1a25_A 110 ---TSRNDFMGSLSFGISELQKA----GVDGWFKLLSQ 140 (149)
T ss_dssp ---SSCCEEEEEEEEEHHHHTTC----CEEEEEECBCH
T ss_pred ---CCCCCEEEEEEEEHHHhCcC----ccCCeEEccCC
Confidence 56778999999999999863 38999999775
No 12
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=97.14 E-value=0.0019 Score=58.85 Aligned_cols=107 Identities=17% Similarity=0.285 Sum_probs=72.2
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee---ccccEEEEEEecCCCCc
Q 007279 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE---ATGELLFELVSHSTSKI 408 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE---~t~~lvlElr~~~~~~l 408 (609)
+.|.|++++||+.......+-||+++......... +.+..+ +.++.|++.+.|... ....|.|+|.-....
T Consensus 29 L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~-- 105 (153)
T 3fbk_A 29 LLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLR-HQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQ-- 105 (153)
T ss_dssp EEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTT-CEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSS--
T ss_pred EEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCcc-EEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCC--
Confidence 67778999999865323368899998653211111 112222 456789999999873 335688888765431
Q ss_pred cCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 007279 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (609)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (609)
.++...||.+.|++.++..+ .-.++.|+.|.+....
T Consensus 106 --~~~d~~lG~~~i~l~~l~~~--~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 106 --SRQSGLIGCMSFGVKSLLTP--DKEISGWYYLLGEHLG 141 (153)
T ss_dssp --GGGCEEEEEEEEEHHHHTC----CCEEEEEECBCTTGG
T ss_pred --CCCCcEEEEEEEEHHHhcCC--CCccccEEECCChhhc
Confidence 23478999999999999864 4678999999887543
No 13
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=97.12 E-value=0.0012 Score=59.68 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=70.8
Q ss_pred EEEEEEeecCCCCCc--CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 007279 335 VFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (609)
Q Consensus 335 v~l~iv~~kNl~~~~--~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~ 405 (609)
+.|.|++++||+... ....+-||+++......... +.+..+ +.++.|++.+.|.... ...|.|++.-+..
T Consensus 25 L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~ 103 (148)
T 3fdw_A 25 LVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQG-KRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR 103 (148)
T ss_dssp EEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGG-EEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG
T ss_pred EEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccC-ccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC
Confidence 677889999998432 23368899998652221111 112222 3567899999998763 3358888876543
Q ss_pred CCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCC
Q 007279 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSS 451 (609)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~ 451 (609)
+++..+||.+.|++.++... =..+.|++|.+++..+++
T Consensus 104 -----~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~~~~~~~~ 141 (148)
T 3fdw_A 104 -----FGRNTFLGEAEIQMDSWKLD---KKLDHCLPLHGKISAESE 141 (148)
T ss_dssp -----GGCEEEEEEEEEEHHHHHHH---CCSEEEEECBCC------
T ss_pred -----CcCCcEEEEEEEEccccccc---CCccceEECcCccccccc
Confidence 56788999999999999753 256799999998765443
No 14
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=97.10 E-value=0.0018 Score=58.66 Aligned_cols=105 Identities=12% Similarity=0.223 Sum_probs=70.0
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeecc----ccEEEEEEecCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEAT----GELLFELVSHST 405 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~t----~~lvlElr~~~~ 405 (609)
.+.|.|++++||+... ....+-||.++......... +.+..+ +.++.|++.+.|..... ..|.|+|..+..
T Consensus 31 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~ 109 (153)
T 1w15_A 31 TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRIS-KKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 109 (153)
T ss_dssp EEEEEEEEEESCC------CCCEEEEEEEEETTEEEE-EEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT
T ss_pred EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEec-eEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC
Confidence 3777889999998542 22368899998653221110 111111 44678999999988743 568888876653
Q ss_pred CCccCCCCcccceeEEeeccc----------ccCCCCcceEEEEEeeccC
Q 007279 406 SKIPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVPR 445 (609)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~d----------ll~~~~~Ls~E~w~~L~~~ 445 (609)
+++..+||.+.|+..+ |+.. |...+++|..|.++
T Consensus 110 -----~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~-p~~~~~~Wh~L~~~ 153 (153)
T 1w15_A 110 -----GSRNEVIGRLVLGATAEGSGGGHWKEICDF-PRRQIAKWHMLCDG 153 (153)
T ss_dssp -----TSCCEEEEEEEESTTCCSHHHHHHHHHHHS-TTCCEEEEEECBCC
T ss_pred -----CCCCcEEEEEEECCCCCchHHHHHHHHHhC-CCCeeeeccccccC
Confidence 5677899999998766 6764 67889999988763
No 15
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=97.10 E-value=0.0023 Score=59.03 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=71.1
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCC
Q 007279 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (609)
Q Consensus 335 v~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~~ 406 (609)
+.|.|++++||+... ....+-||.++....+.... ..+..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 39 L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~- 116 (166)
T 2cm5_A 39 LIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKA-KHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI- 116 (166)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CC-EEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS-
T ss_pred EEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccc-eEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC-
Confidence 677789999998652 22368899998653221111 111222 4567999999999864 4588899887654
Q ss_pred CccCCCCcccceeEEeeccc----------ccCCCCcceEEEEEeeccCCC
Q 007279 407 KIPMTGASKTMGTASLSLQN----------FISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~d----------ll~~~~~Ls~E~w~~L~~~~~ 447 (609)
+++..+||.++|+..+ |+.. +.-.++.|..|.+.+.
T Consensus 117 ----~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~-~~~~~~~Wh~L~~~~~ 162 (166)
T 2cm5_A 117 ----GKSNDYIGGCQLGISAKGERLKHWYECLKN-KDKKIERWHQLQNENH 162 (166)
T ss_dssp ----SSCCEEEEEEEEETTCCHHHHHHHHHHHHC-TTCCEEEEEECBC---
T ss_pred ----CCCCcEEEeEEEecccCCchhHHHHHHHhC-CCCcceEeeECCCccc
Confidence 5677899999999766 4554 5678899999887544
No 16
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=97.05 E-value=0.0063 Score=53.76 Aligned_cols=114 Identities=11% Similarity=0.151 Sum_probs=77.7
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEee-ccccEEEEEEecCCCCccCCC
Q 007279 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPMTG 412 (609)
Q Consensus 335 v~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqCE-~t~~lvlElr~~~~~~l~~~~ 412 (609)
+.|.|++++||+... ....+-||.++.. +++ .+.+ ...=+.++.|++.+.|... +...|.|++..+.. ++
T Consensus 15 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~-~~~-~kT~-~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~-----~~ 86 (133)
T 2ep6_A 15 LQVKVLKAADLLAADFSGKSDPFCLLELG-NDR-LQTH-TVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDG-----DK 86 (133)
T ss_dssp EEEEEEEEESCCCSSSSSCCCEEEEEEET-TEE-EECC-CCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEET-----TE
T ss_pred EEEEEEeeECCCCCCCCCCcCeEEEEEEC-CEE-EEee-eecCCCCCccccEEEEEecCCCCEEEEEEEECCC-----CC
Confidence 667789999998542 2236789998854 221 1111 1111356799999999987 56789999987765 45
Q ss_pred CcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEee
Q 007279 413 ASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSF 462 (609)
Q Consensus 413 ~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~ 462 (609)
+...||.+.|+..++... .+.|++|...++. +...=.|+|.+++
T Consensus 87 ~~~~lG~~~i~l~~l~~~-----~~~w~~L~~~~~~-~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDG-----QPNCYVLKNKDLE-QAFKGVIYLEMDL 130 (133)
T ss_dssp EEEECCBCEEEGGGCCSS-----CCEECCCBCSCTT-SCCSSEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCC-----CceEEEeecCCCC-CccceEEEEEEEE
Confidence 678999999999999753 2589999876542 2233366666664
No 17
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=97.03 E-value=0.0023 Score=56.58 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=80.8
Q ss_pred EEEEEEEeecCCCCCcC-CCCceEEEEeccCCCccccccceee--eeeccccceeEEEEee-ccccEEEEEEecCCCCcc
Q 007279 334 EVFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIP 409 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~~-~~~~lFVr~~~~q~d~~~~~~~~~~--iss~s~~k~~~~lqCE-~t~~lvlElr~~~~~~l~ 409 (609)
.+.|.|++++||+.... ...+-||.++... ++ ++ .+.. =+.++.|++.+.|... ....|.|++..+..
T Consensus 11 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~-~k--T~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~---- 82 (136)
T 1wfj_A 11 TLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QD-QK--SNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV---- 82 (136)
T ss_dssp EEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CE-EE--CCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS----
T ss_pred EEEEEEEeccCCCCcccCCCcCceEEEEECC-cc-ce--eEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC----
Confidence 36778899999986522 2367899988542 22 11 1111 1346799999999988 46788888876643
Q ss_pred CCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 007279 410 MTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (609)
Q Consensus 410 ~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (609)
+.+..+||.+.|++++++.. .-..+.|++|.+. + ...=.|++.+++.|-
T Consensus 83 -~~~d~~lG~~~i~l~~l~~~--~~~~~~w~~L~~~-~---~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 -GTEDDAVGEATIPLEPVFVE--GSIPPTAYNVVKD-E---EYKGEIWVALSFKPS 131 (136)
T ss_dssp -CTTTCCSEEEEEESHHHHHH--SEEEEEEEEEEET-T---EEEEEEEEEEEEEEC
T ss_pred -CCCCceEEEEEEEHHHhccC--CCCCcEEEEeecC-C---ccCEEEEEEEEEEeC
Confidence 56788999999999999654 3457899999832 1 222477777777664
No 18
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=96.99 E-value=0.0036 Score=57.18 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=72.4
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~ 405 (609)
.+.|.|++++||+... ....+-||.++....+.... ..+..+ +.++.|++.+.|.+.. ...|.|+|..+..
T Consensus 26 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 104 (159)
T 1tjx_A 26 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLK-KKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 104 (159)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred EEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceec-eeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC
Confidence 3677789999998552 22357899998653221111 111111 4567899999999863 3568888887654
Q ss_pred CCccCCCCcccceeEEeecc----------cccCCCCcceEEEEEeeccC
Q 007279 406 SKIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (609)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~----------dll~~~~~Ls~E~w~~L~~~ 445 (609)
+++..+||.+.|+.. +++.. +.-.+++|+.|.+.
T Consensus 105 -----~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~-~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 105 -----IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 148 (159)
T ss_dssp -----SSCCEEEEEEEEETTCCHHHHHHHHHHHHS-TTCCEEEEEECBCH
T ss_pred -----CCCCceEEEEEECCCCCCcHHHHHHHHHHC-CCCeeeeEEECcCc
Confidence 567789999999987 55654 56788999999774
No 19
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=96.94 E-value=0.0091 Score=52.65 Aligned_cols=124 Identities=10% Similarity=0.066 Sum_probs=78.2
Q ss_pred EEEEEEEEeecCCCCC-cCCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeeccccEEEEEEecCCCCccCC
Q 007279 333 VEVFVEIVAVKNLPED-HKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMT 411 (609)
Q Consensus 333 ~ev~l~iv~~kNl~~~-~~~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqCE~t~~lvlElr~~~~~~l~~~ 411 (609)
..+.|.|++++||+.. .....+-||.++.......... ....=+.++.|++.+.|.+.....|.|++.-+.... ..
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT-~v~~~t~nP~wne~f~f~v~~~~~l~~~v~d~d~~~--~~ 81 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHST-DTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIH--KK 81 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEEC-CCCSSCSSCEEEEEEEEEEETTCCEEEEEEEGGGTT--SS
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEEC-CccCCCCCCCccCEEEEEeCCCCEEEEEEEECCCCC--CC
Confidence 4577889999999754 2223688999986432221111 011113467899999999986667999998765421 11
Q ss_pred CCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCC-CCceEEEEEe
Q 007279 412 GASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSS-KPISLRIAVS 461 (609)
Q Consensus 412 ~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~-~p~~lrva~S 461 (609)
.....||.+.|++.++.+.. -....|++|...++.... ..=.|.|.+|
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~--~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLK--DTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHT--TSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhccc--ccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 23689999999999885432 233578999876443322 2335665554
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=96.93 E-value=0.0049 Score=54.31 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=71.0
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec-c--ccEEEEEEecCCCC
Q 007279 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA-T--GELLFELVSHSTSK 407 (609)
Q Consensus 335 v~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~-t--~~lvlElr~~~~~~ 407 (609)
+.|.|++++||+... ....+-||.++......... ..+..+ +.++.|++.+.|.... . ..|.|++..+..
T Consensus 18 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~-~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~-- 94 (137)
T 3rdl_A 18 LHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNES-KQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR-- 94 (137)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCC-CEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCe-eecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC--
Confidence 678889999998642 22368899998642110001 111222 4567899999998763 2 468888877644
Q ss_pred ccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (609)
+++..+||.++|++.++... . .+.|+.|.+.+.
T Consensus 95 ---~~~~~~iG~~~i~l~~l~~~--~--~~~W~~L~~~~~ 127 (137)
T 3rdl_A 95 ---TTRNDFMGSLSFGVSELMKM--P--ASGWYKLLNQEE 127 (137)
T ss_dssp ---SSCCEEEEEEEEEHHHHHHS--C--EEEEEECBCHHH
T ss_pred ---CCCCceEEEEEEeHHHhccC--c--cCceEECcCccc
Confidence 56788999999999999874 2 799999987643
No 21
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.92 E-value=0.005 Score=55.87 Aligned_cols=100 Identities=14% Similarity=0.177 Sum_probs=70.8
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCC
Q 007279 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (609)
Q Consensus 335 v~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~~ 406 (609)
+.|.|++++||+... ....+-||+++....+.. ..+..+ +.++.|++.+.|.... ...|.|+|..+..
T Consensus 44 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~- 119 (152)
T 1rsy_A 44 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKK---KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR- 119 (152)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCS---CEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS-
T ss_pred EEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCc---eEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC-
Confidence 677889999998652 223578999986522211 111222 3467999998888752 4689999887654
Q ss_pred CccCCCCcccceeEEeecccccCCCCcceEEEEEeeccC
Q 007279 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (609)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~ 445 (609)
+++..+||.+.|++.++... -.++.|++|.+.
T Consensus 120 ----~~~~~~iG~~~i~l~~l~~~---~~~~~W~~L~~~ 151 (152)
T 1rsy_A 120 ----FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQSA 151 (152)
T ss_dssp ----SSCCEEEEEEEEEGGGCCCS---SCEEEEEECBCC
T ss_pred ----CCCCcEEEEEEEEchhccCC---CCcceEEECCCC
Confidence 56778999999999998642 368999998763
No 22
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.92 E-value=0.0044 Score=55.70 Aligned_cols=103 Identities=16% Similarity=0.240 Sum_probs=71.4
Q ss_pred EEEEEEEeecCCCCC--cC------CCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEE
Q 007279 334 EVFVEIVAVKNLPED--HK------DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLF 398 (609)
Q Consensus 334 ev~l~iv~~kNl~~~--~~------~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvl 398 (609)
.+.|.|++++||+.. .. ...+-||+++....+.. ..+..+ +.++.|++.+.|.... ...|.|
T Consensus 27 ~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 27 HLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKN---SKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp EEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSS---CEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred EEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCc---ceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 367788999999863 10 12578999986532211 111222 3467999999998763 358888
Q ss_pred EEEecCCCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 007279 399 ELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 399 Elr~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (609)
+|.-+.. +++..+||.+.|++.++.... ..+.|+.|.|++.
T Consensus 104 ~V~d~d~-----~~~~~~iG~~~i~l~~l~~~~---~~~~w~~L~~~~~ 144 (147)
T 2enp_A 104 TVVDFDK-----FSRHCVIGKVSVPLCEVDLVK---GGHWWKALIPSGP 144 (147)
T ss_dssp EEECCST-----TCCSCCCEEEEEETTTSCTTT---CCCEEECCBCCCC
T ss_pred EEEECCC-----CcCCcEEEEEEEechhcCCCC---CccEEEEeecCCC
Confidence 8886654 566789999999999997542 3478999998754
No 23
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.91 E-value=0.0035 Score=55.91 Aligned_cols=106 Identities=19% Similarity=0.193 Sum_probs=72.1
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCCC
Q 007279 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~~~ 407 (609)
+.|.|++++||+.....+.+-||.++....+.... +.+..+ +.++.|++.+.|.... ...|.|+|..+...
T Consensus 26 L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~- 103 (142)
T 2dmg_A 26 LIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSG-RRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGF- 103 (142)
T ss_dssp EEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSS-CEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCS-
T ss_pred EEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCC-cccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCc-
Confidence 67778999999865332268899998753222111 112222 3467899988888753 35899999876541
Q ss_pred ccCCC-CcccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 007279 408 IPMTG-ASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (609)
Q Consensus 408 l~~~~-~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (609)
.+ ...+||.+.|++.++... . ..+.|++|.+.++.
T Consensus 104 ---~~~~~~~iG~~~i~l~~~~~~--~-~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 104 ---LSKDKGLLGKVLVALASEELA--K-GWTQWYDLTEDSGP 139 (142)
T ss_dssp ---SCCSCCCCEEEEEECCCSTTT--T-CBCCBCCCBCSCSC
T ss_pred ---cccCCcEEEEEEEeccccccc--c-cccceeeccCCCCC
Confidence 12 235899999999998754 2 67899999987543
No 24
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=96.87 E-value=0.0088 Score=53.22 Aligned_cols=115 Identities=8% Similarity=0.150 Sum_probs=76.2
Q ss_pred EEEEEEEeecCCCCCc---C---------CCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeeccccEEEEEE
Q 007279 334 EVFVEIVAVKNLPEDH---K---------DKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELV 401 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~---~---------~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqCE~t~~lvlElr 401 (609)
.+.|.|++++||+... + ...+-||.++... ...... ....=+.++.|++.+.|.-.....|.|++.
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-~~~~~T-~~~~~t~nP~WnE~f~f~v~~~~~L~~~V~ 84 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-SRIGQT-ATKQKTNSPAWHDEFVTDVCNGRKIELAVF 84 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-EEEEEC-CCCSSCSSCEEEEEEEEEEEEECEEEEEEE
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-eEeeee-eEECCCcCCccCCEEEEEecCCCEEEEEEE
Confidence 3677889999998531 1 1157899887521 111000 001113467899988888764488889987
Q ss_pred ecCCCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeecC
Q 007279 402 SHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTI 464 (609)
Q Consensus 402 ~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~Tp 464 (609)
-+.. +.+..+||.++|+++++... +.-.++.|++|.|.+ .|+|.+++++
T Consensus 85 d~d~-----~~~dd~iG~~~i~l~~l~~~-~~~~~~~w~~L~~~G--------~i~l~l~~~~ 133 (136)
T 1gmi_A 85 HDAP-----IGYDDFVANCTIQFEELLQN-GSRHFEDWIDLEPEG--------KVYVIIDLSG 133 (136)
T ss_dssp ECCS-----SSSCEEEEEEEEEHHHHTST-TCSEEEEEEECBSSC--------EEEEEEEEEE
T ss_pred eCCC-----CCCCCEEEEEEEEHHHhccc-CCCCccEEEEcCCCe--------EEEEEEEEEe
Confidence 6543 56678999999999999975 345679999998742 4666666543
No 25
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=96.85 E-value=0.0031 Score=58.82 Aligned_cols=105 Identities=19% Similarity=0.189 Sum_probs=72.2
Q ss_pred EEEEEEeecCCCCCc--CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee-ccccEEEEEE-ecCCCC
Q 007279 335 VFVEIVAVKNLPEDH--KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-ATGELLFELV-SHSTSK 407 (609)
Q Consensus 335 v~l~iv~~kNl~~~~--~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE-~t~~lvlElr-~~~~~~ 407 (609)
+.|.|++++||+... ....+-||.++......... ..+..+ +.++.|++.+.|... ....|.|+|. -+..
T Consensus 32 L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~-- 108 (171)
T 2q3x_A 32 LEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIA-KKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR-- 108 (171)
T ss_dssp EEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST--
T ss_pred EEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCcccc-ceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC--
Confidence 678889999998542 23468899998653211111 111111 346789998888876 4578888887 4332
Q ss_pred ccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGN 448 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~ 448 (609)
+++...||.+.|++.++... -..+.|++|.+.+..
T Consensus 109 ---~~~d~~iG~~~i~l~~l~~~---~~~~~W~~L~~~~~~ 143 (171)
T 2q3x_A 109 ---MDHKCFMGVAQILLEELDLS---SMVIGWYKLFPPSSL 143 (171)
T ss_dssp ---TCSSEEEEEEEECGGGSCTT---SCEEEEEECBCGGGG
T ss_pred ---CCCCCEEEEEEEEHHHcccC---CCcceeEECCCcccc
Confidence 56778999999999999753 258999999887653
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.83 E-value=0.0064 Score=53.13 Aligned_cols=98 Identities=16% Similarity=0.216 Sum_probs=65.0
Q ss_pred EEEEEEeecCCCCCcC-CCCceEEEEeccCCCccccccceeee---eeccccceeEEEEee-----ccccEEEEEEecCC
Q 007279 335 VFVEIVAVKNLPEDHK-DKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCE-----ATGELLFELVSHST 405 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~-~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE-----~t~~lvlElr~~~~ 405 (609)
+.|.|++++||+.... ...+-||.++... |..-....+..+ +.++.|++.+.|.+. ....|.|++..+..
T Consensus 20 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~ 98 (129)
T 2bwq_A 20 LIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR 98 (129)
T ss_dssp EEEEEEEEESCCCCTTSCCBCEEEEEEEES-SCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC--
T ss_pred EEEEEEEeeCCCCCCCCCCCCCEEEEEEec-CCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc
Confidence 7788899999986522 2357899998642 210000111222 456789999999852 24688888887654
Q ss_pred CCccCCC--CcccceeEEeecccccCCCCcceEEEEEee
Q 007279 406 SKIPMTG--ASKTMGTASLSLQNFISPISKLAVEQWFDL 442 (609)
Q Consensus 406 ~~l~~~~--~sk~lG~~sisw~dll~~~~~Ls~E~w~~L 442 (609)
++ +...||.+.|++.++... . .+.|++|
T Consensus 99 -----~~~~~~~~lG~~~i~l~~l~~~--~--~~~W~~L 128 (129)
T 2bwq_A 99 -----VREEESEFLGEILIELETALLD--D--EPHWYKL 128 (129)
T ss_dssp ----------CEEEEEEEEEGGGCCCS--S--CEEEEEC
T ss_pred -----CcCcCCceeEEEEEEccccCCC--c--CCccEEC
Confidence 33 378999999999999864 3 7899987
No 27
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=96.81 E-value=0.019 Score=56.85 Aligned_cols=123 Identities=13% Similarity=0.161 Sum_probs=81.0
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCC-ccccccceeeeeeccccceeEEEEeec----cccEEEEEEecCCCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPD-IFFNAKQKLTILSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d-~~~~~~~~~~iss~s~~k~~~~lqCE~----t~~lvlElr~~~~~~ 407 (609)
++.|.|++++||+... ....+-||.++....+ .....+ ...=+.++.|++.+.|.... ...|.|++..+..
T Consensus 20 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~-~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~-- 96 (284)
T 2r83_A 20 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETK-VHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR-- 96 (284)
T ss_dssp EEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECC-CCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCC-cccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC--
Confidence 3778889999998542 2236889999864221 111110 11113467899999888753 3578888876553
Q ss_pred ccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (609)
+++...||.+.|++.++... -..+.|++|.+..+......=.+.+.+...|+
T Consensus 97 ---~~~~~~lG~~~i~l~~l~~~---~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 97 ---FSKHDIIGEFKVPMNTVDFG---HVTEEWRDLQSAEKEEQEKLGDICFSLRYVPT 148 (284)
T ss_dssp ---SSCCCEEEEEEEEGGGCCCS---SCEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred ---CCCCceeEEEEEcchhcccC---CcceeEEEeeccccccccccccEEEEEEecCc
Confidence 56778999999999999753 36799999987654322233356666666553
No 28
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=96.78 E-value=0.0069 Score=56.76 Aligned_cols=102 Identities=18% Similarity=0.193 Sum_probs=70.3
Q ss_pred EEEEEEEeecCCCCCc-----------CCCCceEEEEeccCCCccccccceeee--eeccccceeEEEEeeccccEEEEE
Q 007279 334 EVFVEIVAVKNLPEDH-----------KDKGDLFVFFSKSQPDIFFNAKQKLTI--LSKSGMKQVASFQCEATGELLFEL 400 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-----------~~~~~lFVr~~~~q~d~~~~~~~~~~i--ss~s~~k~~~~lqCE~t~~lvlEl 400 (609)
.+.|.|++++||+..- ....+-||.++... ....+ +..+ +.++.|++.+.|.-.....|.|++
T Consensus 30 ~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-~~~~k---T~v~~ktlnP~WNE~F~f~v~~~~~L~~~V 105 (157)
T 2fk9_A 30 YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-VRVGQ---TSTKQKTNKPTYNEEFCANVTDGGHLELAV 105 (157)
T ss_dssp EEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-EEEEE---CCCCSSCSSCEEEEEEEEEEEEECEEEEEE
T ss_pred EEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-EeeEE---eeecCCCCCCccCcEEEEEcCCCCEEEEEE
Confidence 3778889999998542 01257899987531 11111 1112 456899999888876666788888
Q ss_pred EecCCCCccCCCCcccceeEEeecccccCCC-CcceEEEEEeecc
Q 007279 401 VSHSTSKIPMTGASKTMGTASLSLQNFISPI-SKLAVEQWFDLVP 444 (609)
Q Consensus 401 r~~~~~~l~~~~~sk~lG~~sisw~dll~~~-~~Ls~E~w~~L~~ 444 (609)
.-... +.+...||+++|+++++.... +.-..+.|++|.+
T Consensus 106 ~D~d~-----~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 106 FHETP-----LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp EECCS-----SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS
T ss_pred EECCC-----CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC
Confidence 75432 466789999999999998630 2357899999977
No 29
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.64 E-value=0.021 Score=50.68 Aligned_cols=105 Identities=11% Similarity=0.126 Sum_probs=70.4
Q ss_pred EEEEEEeecCCCCCcC--CCCceEEEEeccCCCc-cccccceeeeeeccccceeEEEE-ee----ccccEEEEEEecCCC
Q 007279 335 VFVEIVAVKNLPEDHK--DKGDLFVFFSKSQPDI-FFNAKQKLTILSKSGMKQVASFQ-CE----ATGELLFELVSHSTS 406 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~--~~~~lFVr~~~~q~d~-~~~~~~~~~iss~s~~k~~~~lq-CE----~t~~lvlElr~~~~~ 406 (609)
+.|.|++++||+.... ...+-||.++....+. .... ....=+.++.|++.+.|+ .. ....|.|+|..+..
T Consensus 24 L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT-~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~- 101 (138)
T 1ugk_A 24 FVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKT-RVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR- 101 (138)
T ss_dssp EEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEEC-CCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS-
T ss_pred EEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEec-CcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC-
Confidence 6778899999986432 2367899998652111 1110 011113467899999986 33 24588899887654
Q ss_pred CccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 007279 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (609)
+++...||.+.|+++++.... =..+-|++|.+.++
T Consensus 102 ----~~~~~~lG~~~i~l~~l~~~~--~~~~~~~~l~~~~~ 136 (138)
T 1ugk_A 102 ----FSRDDIIGEVLIPLSGIELSE--GKMLMNREIISGPS 136 (138)
T ss_dssp ----SCCCCCCEEEEEECTTCCCTT--CCEEEEEECBSSSS
T ss_pred ----CCCCcEEEEEEEehhHccCCC--CcchhhhhhhcCCC
Confidence 567789999999999997642 34577899987643
No 30
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=96.58 E-value=0.011 Score=55.72 Aligned_cols=105 Identities=17% Similarity=0.136 Sum_probs=72.7
Q ss_pred EEEEEEEeecCCC-CCcCCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeeccccEEEEEEecCCCCccCCC
Q 007279 334 EVFVEIVAVKNLP-EDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEATGELLFELVSHSTSKIPMTG 412 (609)
Q Consensus 334 ev~l~iv~~kNl~-~~~~~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqCE~t~~lvlElr~~~~~~l~~~~ 412 (609)
.+.|.|++++||+ .....+.+-||.++... ...+.+ ...=+.++.|++.+.|.+.+...|.|||.-+.. ++
T Consensus 37 ~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~--~~~kT~-v~~~tlnP~Wne~f~f~v~~~~~L~~~V~D~d~-----~~ 108 (173)
T 2nq3_A 37 QLQITVISAKLKENKKNWFGPSPYVEVTVDG--QSKKTE-KCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQT-----LK 108 (173)
T ss_dssp EEEEEEEEEEECCCC--CCCCCEEEEEEETT--EEEECC-CCSSCSSCEEEEEEEEEECTTCEEEEEEEECCS-----SS
T ss_pred EEEEEEEEeECCCCcccCCCCCeEEEEEECC--EEeEcc-ccCCCCCCeECCEEEEEeCCCCEEEEEEEECCC-----CC
Confidence 3777889999998 33222367899988542 111100 111134679999999999888899999987654 56
Q ss_pred CcccceeEEeecccccCCCC-cc-eEEEEEeeccCC
Q 007279 413 ASKTMGTASLSLQNFISPIS-KL-AVEQWFDLVPRS 446 (609)
Q Consensus 413 ~sk~lG~~sisw~dll~~~~-~L-s~E~w~~L~~~~ 446 (609)
+...||.+.|++++++...+ .. .++.|++|...+
T Consensus 109 ~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~ 144 (173)
T 2nq3_A 109 SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK 144 (173)
T ss_dssp CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS
T ss_pred CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC
Confidence 78899999999999986422 12 357899998864
No 31
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.52 E-value=0.0097 Score=52.91 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=72.7
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccc--------cccceeee---eeccccceeEEEE-ee----ccccE
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFF--------NAKQKLTI---LSKSGMKQVASFQ-CE----ATGEL 396 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~--------~~~~~~~i---ss~s~~k~~~~lq-CE----~t~~l 396 (609)
.+.|.|++++||+... ....+-||.++....+..+ ....+..+ +.++.|++.+.|. -. ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 3778899999998652 2235789999966432110 00011111 4567899988886 22 35689
Q ss_pred EEEEEecCCCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 007279 397 LFELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 397 vlElr~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (609)
.|++..+.. +++...||.+.|++.++... -..++|++|.+.++
T Consensus 99 ~i~V~d~d~-----~~~~~~lG~~~i~l~~l~~~---~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 99 EVTVWDYDR-----FSSNDFLGEVLIDLSSTSHL---DNTPRWYPLKEQTE 141 (142)
T ss_dssp EEEEEEECS-----SSCEEEEEEEEEETTSCGGG---TTCCEEEECBCCCC
T ss_pred EEEEEECCC-----CCCCceEEEEEEeccccccC---CCCCeEEECCccCC
Confidence 999987755 56778999999999998753 24679999988654
No 32
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=96.50 E-value=0.013 Score=54.08 Aligned_cols=101 Identities=11% Similarity=0.136 Sum_probs=71.2
Q ss_pred EEEEEEeecCCCCC-cCCCCceEEEEeccCC--Cccccccceeee---eeccccceeEEEEeec----cccEEEEEEecC
Q 007279 335 VFVEIVAVKNLPED-HKDKGDLFVFFSKSQP--DIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHS 404 (609)
Q Consensus 335 v~l~iv~~kNl~~~-~~~~~~lFVr~~~~q~--d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~ 404 (609)
+.|.|++++||+.. .....+-||+++.... ++.. +.+..+ +.++.|++.+.|.... ...|.|++.-+.
T Consensus 45 L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~--~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d 122 (155)
T 2z0u_A 45 FAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTC--LFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTD 122 (155)
T ss_dssp EEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHH--EEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEEC
T ss_pred EEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCcc--ceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECC
Confidence 67788999999854 2233688999997643 2211 111222 3467899999888653 457889988765
Q ss_pred CCCccCCCCcccceeEEeecccccCCCCcceEEEEEeecc
Q 007279 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (609)
Q Consensus 405 ~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~ 444 (609)
. +++..+||.+.|+++++... .-..+.|++|.|
T Consensus 123 ~-----~~~~d~iG~~~i~l~~l~~~--~~~~~~W~~L~~ 155 (155)
T 2z0u_A 123 R-----SHLEECLGGAQISLAEVCRS--GERSTRWYNLLS 155 (155)
T ss_dssp T-----TSCEEEEEEEEEECTTSCTT--CCCEEEEEEEBC
T ss_pred C-----CCCCcEEEEEEEEHHHccCC--CCccccceEccC
Confidence 4 56788999999999999642 346789999864
No 33
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=96.14 E-value=0.042 Score=48.86 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=68.3
Q ss_pred EEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEe--ec---cccEEEEEEecCC
Q 007279 335 VFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQC--EA---TGELLFELVSHST 405 (609)
Q Consensus 335 v~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqC--E~---t~~lvlElr~~~~ 405 (609)
+.|.|++++||+... ....+-||+++......... ..+..+ +.++.|++.+.|.. .. ...|.|+|..+..
T Consensus 31 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 109 (142)
T 2chd_A 31 LQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSN-KLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK 109 (142)
T ss_dssp EEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGG-EEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT
T ss_pred EEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcc-eeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC
Confidence 677889999998652 22368899999763211111 111222 44678999988872 21 3689999987754
Q ss_pred CCccCCCCcccceeEEeecccccCCCCcceEEEEEeecc
Q 007279 406 SKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVP 444 (609)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~ 444 (609)
+++...||.++|+++++... =..+-|++|..
T Consensus 110 -----~~~d~~iG~~~i~l~~l~~~---~~~~~~~~L~~ 140 (142)
T 2chd_A 110 -----FGHNEFIGETRFSLKKLKAN---QRKNFNICLER 140 (142)
T ss_dssp -----TSCEEEEEEEEEEGGGCCTT---CCEEEEEECBC
T ss_pred -----CCCCcEEEEEEEEHHHcCCC---CccEEEEeccc
Confidence 46678999999999999864 25777777654
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=96.01 E-value=0.023 Score=56.22 Aligned_cols=105 Identities=18% Similarity=0.266 Sum_probs=71.7
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~ 405 (609)
.+.|.|++++||+... ....+-||+++......... +.+..+ +.++.|++.+.|.+.. ...|.|+|.-+..
T Consensus 151 ~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 229 (284)
T 2r83_A 151 KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLK-KKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 229 (284)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCS
T ss_pred ceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEee-eeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCC
Confidence 3677889999998542 22368899998653221111 111222 3467899999998863 3468888887654
Q ss_pred CCccCCCCcccceeEEeecc----------cccCCCCcceEEEEEeeccC
Q 007279 406 SKIPMTGASKTMGTASLSLQ----------NFISPISKLAVEQWFDLVPR 445 (609)
Q Consensus 406 ~~l~~~~~sk~lG~~sisw~----------dll~~~~~Ls~E~w~~L~~~ 445 (609)
+++..+||.+.|+.+ +++.. |.-.+++|+.|.+.
T Consensus 230 -----~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~-~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 230 -----IGKNDAIGKVFVGYNSTGAELRHWSDMLAN-PRRPIAQWHTLQVE 273 (284)
T ss_dssp -----SSCCCEEEEEEEETTCCHHHHHHHHHHHHS-TTSCEEEEEECBCH
T ss_pred -----CCCCcEEEEEEECCCCCCcHHHHHHHHHHC-CCCchheeeecCCc
Confidence 567889999999965 45553 56788999999875
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=95.62 E-value=0.077 Score=47.33 Aligned_cols=101 Identities=17% Similarity=0.162 Sum_probs=69.0
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCCCC
Q 007279 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHSTSK 407 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~~~ 407 (609)
+.|.|++++|...... .+-||+++....+..-. .+..+ +.++.|++.+.|.... ...|.|+|.-+..
T Consensus 28 L~V~v~~a~~~d~~g~--sDPyv~v~l~~~~~~~~--~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~-- 101 (138)
T 1wfm_A 28 LFVTRLEAVTSNHDGG--CDCYVQGSVANRTGSVE--AQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR-- 101 (138)
T ss_dssp EEEEEEEEECCCCSSC--CCEEEEEEEEETTEEEE--EECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS--
T ss_pred EEEEEEEEEcCCCCCC--cceEEEEEEEcCCCccc--EecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC--
Confidence 6777889887544444 68899998753222110 11212 3467899999998653 3578888877643
Q ss_pred ccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (609)
+++..+||.+.|++.++... -..+.|++|.+...
T Consensus 102 ---~~~dd~lG~~~i~l~~l~~~---~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 102 ---FSRHSVAGELRLGLDGTSVP---LGAAQWGELKTSGP 135 (138)
T ss_dssp ---SCTTSCSEEEEEESSSSSSC---TTCCEEEECCCCSC
T ss_pred ---CCCCcEEEEEEEEcccccCc---ccccceeeCcCCCc
Confidence 56778999999999998532 35689999987543
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=94.81 E-value=0.015 Score=58.53 Aligned_cols=107 Identities=19% Similarity=0.263 Sum_probs=71.6
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~ 405 (609)
.+.|.|++++||+... ....+-||+++......... +.+..+ +.++.|++.+.|.... ...|.|+|.-+..
T Consensus 153 ~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 231 (296)
T 1dqv_A 153 LLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLK-KRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDC 231 (296)
T ss_dssp EEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTS-CEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCS
T ss_pred eeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCcc-ceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCC
Confidence 4677789999997542 22358899999764222111 112222 3457899988887653 2468899887654
Q ss_pred CCccCCCCcccceeEEee-----------cccccCCCCcceEEEEEeeccCCC
Q 007279 406 SKIPMTGASKTMGTASLS-----------LQNFISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 406 ~~l~~~~~sk~lG~~sis-----------w~dll~~~~~Ls~E~w~~L~~~~~ 447 (609)
+++..+||.+.|+ |.+|+.. |.-.+++|..|.+..+
T Consensus 232 -----~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~-~~~~~~~w~~L~~~~~ 278 (296)
T 1dqv_A 232 -----IGHNEVIGVCRVGPEAADPHGREHWAEMLAN-PRKPVEHWHQLVEEKT 278 (296)
T ss_dssp -----SSCCEEEEECCCSSCTTCHHHHHHHHTSSSS-SSSCSCSCCCCBBCC-
T ss_pred -----CCCCceEEEEEECCccCCchhHHHHHHHHhC-CCCceeEeeeccCccc
Confidence 5677899999988 5556654 5678888888887655
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=93.97 E-value=0.47 Score=47.51 Aligned_cols=121 Identities=15% Similarity=0.209 Sum_probs=77.7
Q ss_pred EEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeee---eeccccceeEEEEeec----cccEEEEEEecCC
Q 007279 334 EVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTI---LSKSGMKQVASFQCEA----TGELLFELVSHST 405 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~i---ss~s~~k~~~~lqCE~----t~~lvlElr~~~~ 405 (609)
++.|.|++++||+... ....+-||+++.. +|..- ..+..+ +.++.|++.+.|.... ...|.|+|.-+..
T Consensus 21 ~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~-~~~~~--~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 21 QLVVRILQALDLPAKDSNGFSDPYVKIYLL-PDRKK--KFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp EEEEEEEEEECCCCCSTTSCCCEEEEEECT-TSTTS--CEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred EEEEEEEEeECCCCcCCCCCcCeEEEEEEE-cCCCe--eEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 4788889999998652 2236789999975 33110 111222 3567999999999853 3489999887653
Q ss_pred CCccCCCCcccceeEEee-cccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeecCC
Q 007279 406 SKIPMTGASKTMGTASLS-LQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIP 465 (609)
Q Consensus 406 ~~l~~~~~sk~lG~~sis-w~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpP 465 (609)
+++..+||.+.|+ ..++... .-..+.|++|.+..+.. ...-.+.+.++..|+
T Consensus 98 -----~~~~~~iG~~~i~~l~~~~~~--~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 98 -----FSRHDLIGQVVLDNLLELAEQ--PPDRPLWRDILEGGSEK-ADLGELNFSLCYLPT 150 (296)
T ss_dssp -----SSCCCEEEEEECCCTTGGGSS--CSSCCCCEECBCCSSCC-SCCCEEEEEEEEETT
T ss_pred -----CCCCceEEEEEeccccccccC--Cccceeeeccccccccc-cccceEEEEEEeccc
Confidence 5677899999995 5455542 23467899997754321 122356666665554
No 38
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=93.81 E-value=0.65 Score=41.37 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=64.8
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceee--eeeccccceeEEEEee-ccccEEEEEEecCCCCccC
Q 007279 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPM 410 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~--iss~s~~k~~~~lqCE-~t~~lvlElr~~~~~~l~~ 410 (609)
.++|.|+++++++...+ .+-||.++ .+. . +.+.. =+.++.|++.+.|... +...|.|++.-+.
T Consensus 6 ~L~V~V~~A~~l~~~g~--~DPYv~v~-~~~--~---kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d------ 71 (131)
T 2cjt_A 6 LLCVGVKKAKFDGAQEK--FNTYVTLK-VQN--V---KSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG------ 71 (131)
T ss_dssp EEEEEEEEEECSSCGGG--CEEEEEEE-ETT--E---EEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC------
T ss_pred EEEEEEEEeECCCCCCC--cCeEEEEE-ecC--E---EEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC------
Confidence 37788899999975444 68899998 221 1 11111 1346799999999887 5567999988764
Q ss_pred CCCcccceeEEeecccccCCCCcceEEEEEeec
Q 007279 411 TGASKTMGTASLSLQNFISPISKLAVEQWFDLV 443 (609)
Q Consensus 411 ~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~ 443 (609)
+.+...||.+.|+++++.... .-....|.++.
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~~-~~~~~~~~~~~ 103 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQSN-EEGPGEWLTLD 103 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBCS-SCCCCEEEECB
T ss_pred CCCCCeEEEEEEEHHHhhhcC-CCCccccEEcc
Confidence 245789999999999997642 12222455553
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=90.92 E-value=0.84 Score=42.66 Aligned_cols=83 Identities=16% Similarity=0.065 Sum_probs=60.2
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceee--eeeccccceeEEEEee-ccccEEEEEEecCCCCccC
Q 007279 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT--ILSKSGMKQVASFQCE-ATGELLFELVSHSTSKIPM 410 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~--iss~s~~k~~~~lqCE-~t~~lvlElr~~~~~~l~~ 410 (609)
-++|.|+++++++...+ .+-||.++ .|. . +.+.. =..++.|++.+.|... ....|.|+|.-+.
T Consensus 15 ~L~V~V~~A~~l~~~g~--~DPYV~v~-~~~--~---kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d------ 80 (167)
T 2cjs_A 15 LLCVGVKKAKFDGAQEK--FNTYVTLK-VQN--V---ESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG------ 80 (167)
T ss_dssp EEEEEEEEEECSSCGGG--CEEEEEEE-ETT--E---EEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC------
T ss_pred EEEEEEEEEECCCCCCC--CCeEEEEE-ecc--e---EEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC------
Confidence 37778899999975444 68899998 221 1 11111 1346799999999987 5678999988764
Q ss_pred CCCcccceeEEeecccccCC
Q 007279 411 TGASKTMGTASLSLQNFISP 430 (609)
Q Consensus 411 ~~~sk~lG~~sisw~dll~~ 430 (609)
+.+..+||++.|+++++...
T Consensus 81 ~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCBC
T ss_pred CCCCceEEEEEEEHHHhccc
Confidence 24588999999999999764
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=90.57 E-value=0.79 Score=49.04 Aligned_cols=107 Identities=11% Similarity=0.146 Sum_probs=72.0
Q ss_pred eEEEEEEEEEeecCCCCCc-CCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEeec--cccEEEEEEecCCCC
Q 007279 331 KIVEVFVEIVAVKNLPEDH-KDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQCEA--TGELLFELVSHSTSK 407 (609)
Q Consensus 331 ~~~ev~l~iv~~kNl~~~~-~~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqCE~--t~~lvlElr~~~~~~ 407 (609)
.+-.+.|.|++++||+... ....+-||.++.. +.+ ...+ ...=+.++.|++.+.|.... ...|.|+|.-+..
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~-~~~-~~T~-~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-- 459 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMG-SQS-YTTR-TIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-- 459 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-TEE-EECC-CCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS--
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEEC-Cee-ccCC-ccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC--
Confidence 3345788899999997552 2336789998853 111 1100 11113567899999998873 3468888876554
Q ss_pred ccCCCCcccceeEEeecccccCCC-CcceEEEEEeeccC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPI-SKLAVEQWFDLVPR 445 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~-~~Ls~E~w~~L~~~ 445 (609)
+++...||.+++++.++.... +.-.++.|+.|...
T Consensus 460 ---~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 460 ---FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp ---SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred ---CCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 567889999999999998531 12347899998765
No 41
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=89.34 E-value=2.3 Score=39.60 Aligned_cols=118 Identities=16% Similarity=0.232 Sum_probs=71.0
Q ss_pred EEEEEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceee-eeeccccceeEEEEeec----cccEEEEEEecCCC
Q 007279 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLT-ILSKSGMKQVASFQCEA----TGELLFELVSHSTS 406 (609)
Q Consensus 332 ~~ev~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~-iss~s~~k~~~~lqCE~----t~~lvlElr~~~~~ 406 (609)
-|.+.|-|..++|+|-.+. .-.-|.|+ +.++. .+.++ -.-++-|++++.+-=-+ ...|.++|..+..
T Consensus 20 ~msL~V~l~~a~~Lpg~~D--p~akv~FR---g~k~k--Tkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~- 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELRGRAD--RIAKVTFR---GQSFY--SRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK- 91 (144)
T ss_dssp CEEEEEEEEEEESCCSCEE--EEEEEEET---TEEEE--CCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT-
T ss_pred cEEEEEEEEEecCCCCCCC--CeEEEEEe---cccee--eEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc-
Confidence 3567777789999995443 12222332 22211 11232 23355678866553222 3456666666555
Q ss_pred CccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeecCCC
Q 007279 407 KIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPT 466 (609)
Q Consensus 407 ~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpPv 466 (609)
+.+.++||++.+++++|..+ +.|++. ..|...++... +..+-+.++-.||-
T Consensus 92 ----v~~nrlIG~~~i~Lq~lv~~-~~l~l~--~~LvD~n~~~~--~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 92 ----VFSNKLIGTFRMVLQKVVEE-NRVEVS--DTLIDDNNAII--KTSLSMEVRYQAAD 142 (144)
T ss_dssp ----TSCCEEEEEEEEESHHHHHH-SEEEEE--EEEECTTSCEE--EEEEEEEEEEEETT
T ss_pred ----ccCCCEEEEEEEEhHHhccC-CeEEEe--ecccCCCCCcc--ccEEEEEEEecCCC
Confidence 55779999999999999997 577765 57766655321 14666777767764
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=87.66 E-value=1.5 Score=50.54 Aligned_cols=101 Identities=16% Similarity=0.109 Sum_probs=71.2
Q ss_pred EEEEEEEEeecCCCC---C-cCCCCceEEEEeccC-CCccccccceeee--eeccccceeEEEEeec--cccEEEEEEec
Q 007279 333 VEVFVEIVAVKNLPE---D-HKDKGDLFVFFSKSQ-PDIFFNAKQKLTI--LSKSGMKQVASFQCEA--TGELLFELVSH 403 (609)
Q Consensus 333 ~ev~l~iv~~kNl~~---~-~~~~~~lFVr~~~~q-~d~~~~~~~~~~i--ss~s~~k~~~~lqCE~--t~~lvlElr~~ 403 (609)
-.+.|.|++++||+. . .....+-||.++... +....+ +-.+ +.++.|++.+.|.+.. ...|.|+|.-+
T Consensus 18 g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~k---Tkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 18 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKR---TRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp EEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEE---CCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred cEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEe---cceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 347788899999987 2 112367899998652 111111 1112 3567899999999873 56888888876
Q ss_pred CCCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccC
Q 007279 404 STSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (609)
Q Consensus 404 ~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~ 445 (609)
.. ++ ...||.+.|++.+|.. .-..+.|++|.+.
T Consensus 95 D~-----~~-ddfIG~v~I~L~~L~~---g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NY-----VM-DETLGTATFTVSSMKV---GEKKEVPFIFNQV 127 (749)
T ss_dssp CS-----SS-CEEEEEECCBSTTSCT---TCCCCEEEEETTT
T ss_pred CC-----CC-CceeEEEEEEHHHcCC---CCceEEEEecCCC
Confidence 54 45 7899999999999964 3457899999875
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=84.97 E-value=5.5 Score=44.80 Aligned_cols=121 Identities=14% Similarity=0.162 Sum_probs=78.2
Q ss_pred CCceEEEEEEEEEeecCCCCCc---CCCCceEEEEeccC-C-Cccccccceeee--e-eccccceeEEEEee-cc-ccEE
Q 007279 328 PDLKIVEVFVEIVAVKNLPEDH---KDKGDLFVFFSKSQ-P-DIFFNAKQKLTI--L-SKSGMKQVASFQCE-AT-GELL 397 (609)
Q Consensus 328 ~~~~~~ev~l~iv~~kNl~~~~---~~~~~lFVr~~~~q-~-d~~~~~~~~~~i--s-s~s~~k~~~~lqCE-~t-~~lv 397 (609)
+.+....+.|.|++++|||... ....+-||.+.... + |... .++-.+ . .++.|++.+.|.+. +. .-|.
T Consensus 492 ~~~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~--~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~ 569 (624)
T 1djx_A 492 PWWRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGS--RQTAVITNNGFNPRWDMEFEFEVTVPDLALVR 569 (624)
T ss_dssp TTCCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEE--EECCCCTTCSSSCEEEEEEEEEESCGGGCEEE
T ss_pred CCccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcce--eecccccCCCCCCccCceEEEEEecCCCCEEE
Confidence 3344556889999999998553 23467899988642 1 2111 111222 1 46789999999887 43 4677
Q ss_pred EEEEecCCCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEee
Q 007279 398 FELVSHSTSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSF 462 (609)
Q Consensus 398 lElr~~~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~ 462 (609)
|+|.-+.. +.+...||.+.|++.+|.. . .+|++|...+|..- ...+|.|-++|
T Consensus 570 ~~V~D~D~-----~~~dd~iG~~~ipl~~L~~-G-----~r~v~L~d~~g~~~-~~~~L~v~i~~ 622 (624)
T 1djx_A 570 FMVEDYDS-----SSKNDFIGQSTIPWNSLKQ-G-----YRHVHLLSKNGDQH-PSATLFVKISI 622 (624)
T ss_dssp EEEEECCS-----SSCCEEEEEEEEEGGGBCC-E-----EEEEEEECTTSCEE-EEEEEEEEEEE
T ss_pred EEEEEcCC-----CCCCceeEEEEEEHHHcCC-C-----cEEEeCCCCCcCCC-CceEEEEEEEE
Confidence 88876643 4667899999999999864 2 37999977665311 12345555554
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=84.35 E-value=0.18 Score=54.75 Aligned_cols=99 Identities=13% Similarity=0.194 Sum_probs=11.6
Q ss_pred EEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceeee--e---eccccceeEEEEee-ccccEEEEEEecCCCCc
Q 007279 335 VFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTI--L---SKSGMKQVASFQCE-ATGELLFELVSHSTSKI 408 (609)
Q Consensus 335 v~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~i--s---s~s~~k~~~~lqCE-~t~~lvlElr~~~~~~l 408 (609)
+.|.|++++||+... +-||.++... .... ++..+ + .++.|++.+.|.+. +...|.++|..+....
T Consensus 13 L~V~VieAk~L~~~d----dpYv~v~l~~-~~~~---kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~- 83 (483)
T 3bxj_A 13 LKLWIIEARELPPKK----RYYCELCLDD-MLYA---RTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK- 83 (483)
T ss_dssp C-----------------------------------------------------CCEECC--------------------
T ss_pred EEEEEEEcCCcCCCC----CCeEEEEECC-eEEe---eeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc-
Confidence 677889999998543 4477776421 1111 11222 2 47899999999987 4567777776532100
Q ss_pred cCCCCcccceeEEeecccccCCCCcceEEEEEeeccC
Q 007279 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPR 445 (609)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~ 445 (609)
..+.+...||.+.|+.+++... -..+.|++|...
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~---~~~~~W~~L~~~ 117 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGR---HFTEQWYPVTLP 117 (483)
T ss_dssp --------------------------CCEECC-----
T ss_pred ccCCCCceEEEEEEEHHHhcCC---CCCCeEEECCCC
Confidence 0145677899999999999853 358999999543
No 45
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=83.82 E-value=20 Score=39.73 Aligned_cols=123 Identities=11% Similarity=0.027 Sum_probs=85.7
Q ss_pred EEEEEEEEEeecCCCCCcCCCCceEEEEeccCCCccccccceeeeeeccccceeEEEEe-e--ccccEEEEEEecCCCCc
Q 007279 332 IVEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQPDIFFNAKQKLTILSKSGMKQVASFQC-E--ATGELLFELVSHSTSKI 408 (609)
Q Consensus 332 ~~ev~l~iv~~kNl~~~~~~~~~lFVr~~~~q~d~~~~~~~~~~iss~s~~k~~~~lqC-E--~t~~lvlElr~~~~~~l 408 (609)
+-.+.|.+++++||+.+.....+-||.++... ...+-+ .+.=+.++.|++.+.|.- + ....|.|||.-...
T Consensus 393 ~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~--~~~kTk-vik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~--- 466 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWGDYTTATDAYLKVFFGG--QEFRTG-VVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY--- 466 (540)
T ss_dssp EEEEEEEEEEEESCCCSSCSCCCEEEEEEETT--EEEECC-CBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS---
T ss_pred ccEEEEEEEEccCCCcccCCCcCeEEEEEECC--Eeeeee-eecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC---
Confidence 55678889999999864222367899998641 112111 111134679999998874 3 46789999866544
Q ss_pred cCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCCCCCceEEEEEeecCCCccchhhcccc
Q 007279 409 PMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVSSKPISLRIAVSFTIPTLAPHLLRMVR 476 (609)
Q Consensus 409 ~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~~~p~~lrva~S~TpPvqApyll~~v~ 476 (609)
+++..+||.++++++ + =+++.|+.|.. | -+.+++-+.+-|=.+.++=+.-+|
T Consensus 467 --~~~dD~LG~~~~~L~----~---g~~~~~~~l~~--G-----~l~~~~~~~c~p~l~g~~c~~y~~ 518 (540)
T 3nsj_A 467 --GWDDDLLGSCDRSPH----S---GFHEVTCELNH--G-----RVKFSYHAKCLPHLTGGTCLEYAP 518 (540)
T ss_dssp --SSCCEEEEEEEECCC----S---EEEEEEEECSS--S-----EEEEEEEEEECTTEESTTSCEECC
T ss_pred --CCCCCEEEEEEEEee----C---CcEEEEEEcCC--e-----EEEEEEEEEECCCCCCChhhhcCC
Confidence 356679999999985 2 24788998653 2 278888888888888888888888
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=77.13 E-value=5.7 Score=44.52 Aligned_cols=103 Identities=22% Similarity=0.291 Sum_probs=69.3
Q ss_pred EEEEEEeecCCCCC-cCCCCceEEEEeccCCCccccccceee-e--eeccccceeEEEEeec---cccEEEEEEecCCCC
Q 007279 335 VFVEIVAVKNLPED-HKDKGDLFVFFSKSQPDIFFNAKQKLT-I--LSKSGMKQVASFQCEA---TGELLFELVSHSTSK 407 (609)
Q Consensus 335 v~l~iv~~kNl~~~-~~~~~~lFVr~~~~q~d~~~~~~~~~~-i--ss~s~~k~~~~lqCE~---t~~lvlElr~~~~~~ 407 (609)
+.|.+++++|++.. .....+-||.++... +.....+.+.. + +.++.|++.+.|+-.. ...|.+|+.-...
T Consensus 174 L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p-~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~-- 250 (674)
T 3pfq_A 174 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-- 250 (674)
T ss_dssp EEEEEEEEESCCCCSTTSSCCEEEEEEEES-CSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS--
T ss_pred eeeeeecccccCCCCcccccCccccccccc-CccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc--
Confidence 56678899998754 223468899998642 21111111111 2 3456899988887652 3468888876543
Q ss_pred ccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCC
Q 007279 408 IPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSG 447 (609)
Q Consensus 408 l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~ 447 (609)
+.+..+||.++|+.+++... ..+.|+.|.....
T Consensus 251 ---~~~dd~iG~~~i~l~~l~~~----~~~~w~~Lls~~~ 283 (674)
T 3pfq_A 251 ---TSRNDFMGSLSFGISELQKA----GVDGWFKLLSQEE 283 (674)
T ss_dssp ---SSCCEECCBCCCBTTHHHHC----CEEEEEECBCTTG
T ss_pred ---ccccccccccccchhhhccC----Ccccceeeccccc
Confidence 56788999999999999974 2489999977644
No 47
>2gix_A Inward rectifier potassium channel 2; cytoplasmic domains of KIR2.1, andersen'S mutation, metal transport; 2.02A {Mus musculus}
Probab=26.60 E-value=1.4e+02 Score=29.04 Aligned_cols=125 Identities=15% Similarity=0.232 Sum_probs=77.6
Q ss_pred cccCCCccccCCCCCCCC---CCceeE---eeccCCceEEEEEEecCCcccCCCccccceeEeE------EeecCCceeE
Q 007279 478 RPLSKSSCFFPLPGRIQP---AKSWTR---VIDETQSEVISLQMRDPKKEKGGDNCTLRKQVIG------VTESGETITL 545 (609)
Q Consensus 478 r~~~~~~~~~~~~~~~q~---~~~~t~---v~d~~g~e~~~~~ir~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~ 545 (609)
++-.||-|++-+.-||++ .=.+++ |--.+|+-|+++|+-+.++ +. ...-+|-+ ++..|+...+
T Consensus 8 ~~~~~~~~vfakisrP~kRa~tI~FS~~AVI~~~dG~~~LmfRv~n~R~----~~-iiea~vr~~L~r~~~t~EGe~~~~ 82 (208)
T 2gix_A 8 FVKKDGHCNVQFINVGEKRNETLVFSHNAVIAMRDGKLCLMWRVGNLQK----SH-LVEAHVRAQLLKSRITSEGEYIPL 82 (208)
T ss_dssp SBCTTSCBCEEEECCCCSCSCSEEECSCEEEEEETTEEEEEEEEEECCS----SC-EEEEEEEEEEEEEEECTTCCEEEE
T ss_pred ccccCceEEEEEecCCcccCCcEEecCeEEEEEeCCEEEEEEEEecCcc----Ce-EEeeEEEEEEEEEEeCCCCcEEEE
Confidence 456778888887778874 334443 4457899999999987644 21 11122222 2667876532
Q ss_pred --EEEe-----cCceEEeccccccccccCCCCceeEec-------CCeeEEEeecc-----ccccCCccccccc-cccee
Q 007279 546 --AEMV-----ETGWSVMDCCWSLKKKSSKEGHLFELL-------GNRMVCIYHVL-----ASLQSPLSYLSGP-CWNFR 605 (609)
Q Consensus 546 --~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~ 605 (609)
-++. ++..-++..-|-+.-.+..+.+|+.++ .-..|-++.|- ...|.--||+.+- .|+.|
T Consensus 83 ~~~~L~l~~d~~~~~~fl~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~dest~qt~qaR~SY~~~eIlWg~r 162 (208)
T 2gix_A 83 DQIDINVGFDSGIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTKQCRSSYLANEILWGHR 162 (208)
T ss_dssp EEEEECSSGGGTTTEECCSSCEEEEEECCTTSTTTTCCHHHHHTCCCEEEEEEEEEETTTCCEEEEEEEEEGGGEEETEE
T ss_pred EEEEEEeccCCCCCceEEeccEEEEEECCCCCCccccChhHHhcCCEEEEEEEEEEecccCcEEEEEEEEchHHEEeCCE
Confidence 3333 355666666666665567778888765 24567777774 3456667887654 68888
Q ss_pred ee
Q 007279 606 YI 607 (609)
Q Consensus 606 ~~ 607 (609)
|.
T Consensus 163 F~ 164 (208)
T 2gix_A 163 YE 164 (208)
T ss_dssp EC
T ss_pred ec
Confidence 74
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=22.39 E-value=4.7e+02 Score=30.74 Aligned_cols=113 Identities=13% Similarity=0.069 Sum_probs=72.2
Q ss_pred EEEEEEEeecCCCCCcCCCCceEEEEeccC--CCccccccceeeee---eccccce-eEEEE-ee-c-cccEEEEEEecC
Q 007279 334 EVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ--PDIFFNAKQKLTIL---SKSGMKQ-VASFQ-CE-A-TGELLFELVSHS 404 (609)
Q Consensus 334 ev~l~iv~~kNl~~~~~~~~~lFVr~~~~q--~d~~~~~~~~~~is---s~s~~k~-~~~lq-CE-~-t~~lvlElr~~~ 404 (609)
.+.|.|+.++||+.+. .+-||.+.... .|..-. .++-.+. -++-|++ .+.|. +. + ..-|.|+|.-+.
T Consensus 726 ~L~V~Visaq~L~~~~---~DPYV~V~l~g~p~D~~~k-~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d 801 (885)
T 3ohm_B 726 ALRVKVISGQFLSDRK---VGIYVEVDMFGLPVDTRRK-YRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG 801 (885)
T ss_dssp EEEEEEEEEESCCSSC---CCEEEEEEEESSTTTCBCC-CCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred EEEEEEEEeccCcccC---CCcEEEEEEeCCCcccccc-eeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC
Confidence 4778889999998642 57899988542 232111 1122332 3578998 78998 53 3 346888888753
Q ss_pred CCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCC-CCCCceEEEEEeecCC
Q 007279 405 TSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNV-SSKPISLRIAVSFTIP 465 (609)
Q Consensus 405 ~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~-~~~p~~lrva~S~TpP 465 (609)
...||.+.|++..|.. . .++++|...+|.. ..--+-|+|.+.--+|
T Consensus 802 ---------ddfiG~~~lpL~~L~~-G-----yR~vpL~~~~g~~l~~atLfv~i~~~~~~~ 848 (885)
T 3ohm_B 802 ---------GKFVGHRILPVSAIRS-G-----YHYVCLRNEANQPLCLPALLIYTEASDYIP 848 (885)
T ss_dssp ---------TEEEEEEEEETTTCCC-E-----EEEEEEECTTSCEEEEEEEEEEEEEEECCC
T ss_pred ---------ccEEeeEEEEHHHcCC-C-----ceEEEecCCCCCccCceEEEEEEEEEecCC
Confidence 4679999999988763 2 6789998776642 1223555666553333
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=20.66 E-value=4.2e+02 Score=30.79 Aligned_cols=111 Identities=11% Similarity=0.053 Sum_probs=71.0
Q ss_pred EEEEEEEEeecCCCCCcCCCCceEEEEeccC--CCccccccceeeee---ecccccee-EEEE-ee-c-cccEEEEEEec
Q 007279 333 VEVFVEIVAVKNLPEDHKDKGDLFVFFSKSQ--PDIFFNAKQKLTIL---SKSGMKQV-ASFQ-CE-A-TGELLFELVSH 403 (609)
Q Consensus 333 ~ev~l~iv~~kNl~~~~~~~~~lFVr~~~~q--~d~~~~~~~~~~is---s~s~~k~~-~~lq-CE-~-t~~lvlElr~~ 403 (609)
..+.|.|+.++||+... .+-||.+.... .|..-.-.++-.+. .++-|++. +.|. .. + ..-|.|+|.-+
T Consensus 650 ~~L~V~Visaq~L~~~~---~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~ 726 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDKQ---ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEE 726 (816)
T ss_dssp EEEEEEEEEEECCCSSC---CCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEcccCCCCC---CCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEec
Confidence 34788889999998642 57899988542 23100000122232 35788986 8887 43 3 24678888875
Q ss_pred CCCCccCCCCcccceeEEeecccccCCCCcceEEEEEeeccCCCCCC-CCCceEEEEEe
Q 007279 404 STSKIPMTGASKTMGTASLSLQNFISPISKLAVEQWFDLVPRSGNVS-SKPISLRIAVS 461 (609)
Q Consensus 404 ~~~~l~~~~~sk~lG~~sisw~dll~~~~~Ls~E~w~~L~~~~~~~~-~~p~~lrva~S 461 (609)
. ...||.+.|+++.|.. . .++++|...+|..- .--+-++|.+.
T Consensus 727 d---------ddfiG~~~ipL~~L~~-G-----yR~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 727 N---------GKFIGHRVMPLDGIKP-G-----YRHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp T---------SCEEEEEEEESTTCCC-E-----EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred C---------CCeeeEEEEEHHHcCC-c-----ceEEEEeCCCCCCCCceEEEEEEEEE
Confidence 3 4679999999988774 2 58899988766421 12356666666
Done!