Your job contains 1 sequence.
>007280
MSTSWADSVSASENAAPASSNISALPRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPAS
GPRWGSGSRPDFGRGQGYGSGGRSGSGWNNRSGGWDRREREVNPFGDDVGAEQPVAEEEN
TGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISI
GGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH
VEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY
LALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFL
AVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL
EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD
LPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR
ANYGGGKSKRSGGNRFGARDFRRDGSFTRGTSNDYYSGVNSSSSAYGVPGGGYGGGYGYS
NHGATSAWD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007280
(609 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 2075 9.6e-215 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 2048 7.0e-212 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 2008 1.2e-207 1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 1340 7.1e-141 2
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 1334 7.1e-141 2
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 1339 1.9e-140 2
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 1337 3.1e-140 2
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 1337 3.1e-140 2
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 1335 8.1e-140 2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 1336 1.3e-139 2
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 1336 1.3e-139 2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 1334 1.7e-139 2
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 1331 1.7e-139 2
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 1331 1.7e-139 2
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 1331 2.1e-139 2
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 1330 2.7e-139 2
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 1331 5.7e-139 2
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 1322 4.0e-138 2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 1313 3.5e-137 2
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 1312 4.5e-137 2
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 1286 4.5e-137 2
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 1302 5.8e-137 2
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 1270 1.7e-135 2
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 1286 2.2e-135 2
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 1295 2.8e-135 2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 1252 6.8e-132 2
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 1214 2.4e-127 2
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 1237 6.1e-126 1
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 1179 1.3e-122 2
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 1142 3.7e-118 2
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 1157 1.8e-117 1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 1100 2.0e-111 1
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 1083 1.3e-109 1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 1073 1.5e-108 1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 1073 1.5e-108 1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 1073 1.5e-108 1
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 1055 1.5e-108 2
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 1069 3.9e-108 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 1069 3.9e-108 1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 1069 3.9e-108 1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 1068 4.9e-108 1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 1063 1.7e-107 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 1057 7.2e-107 1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol... 1052 2.5e-106 1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN... 1052 2.5e-106 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 1047 8.3e-106 1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 1013 3.3e-102 1
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 983 5.0e-99 1
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 972 7.4e-98 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 889 4.6e-89 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 881 3.2e-88 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 881 3.2e-88 1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 819 3.7e-88 3
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 875 1.4e-87 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 870 4.7e-87 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 868 7.7e-87 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 840 4.4e-86 2
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 840 4.4e-86 2
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 840 4.4e-86 2
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 840 4.4e-86 2
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 858 8.9e-86 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 857 1.1e-85 1
UNIPROTKB|B4E132 - symbol:DDX3Y "Uncharacterized protein"... 823 1.9e-85 2
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 850 6.2e-85 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 850 6.2e-85 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 850 6.2e-85 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 848 1.0e-84 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 846 1.7e-84 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 843 3.4e-84 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 843 3.4e-84 1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 843 3.4e-84 1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 843 3.4e-84 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 842 4.4e-84 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 842 4.4e-84 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 842 4.4e-84 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 842 4.4e-84 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 842 4.4e-84 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 840 7.2e-84 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 840 7.2e-84 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 840 7.2e-84 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 839 9.1e-84 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 838 1.2e-83 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 838 1.2e-83 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 818 1.9e-83 2
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 835 2.4e-83 1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd... 835 2.4e-83 1
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica... 835 2.4e-83 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 834 3.1e-83 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 829 1.0e-82 1
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli... 818 1.5e-81 1
UNIPROTKB|Q8IAU1 - symbol:PF08_0096 "RNA helicase, putati... 818 1.5e-81 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 814 4.1e-81 1
WB|WBGene00001600 - symbol:glh-3 species:6239 "Caenorhabd... 814 4.1e-81 1
UNIPROTKB|O01836 - symbol:glh-3 "ATP-dependent RNA helica... 814 4.1e-81 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 806 2.9e-80 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 806 2.9e-80 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 793 6.8e-79 1
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 790 1.4e-78 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 783 7.9e-78 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 766 5.0e-76 1
WARNING: Descriptions of 870 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 2075 (735.5 bits), Expect = 9.6e-215, P = 9.6e-215
Identities = 415/581 (71%), Positives = 462/581 (79%)
Query: 2 STSWADXXXXXXXXXXXXXXXXXLPRPTRSTYVPPHLRNKPPTSS-EPPASSRESTEPAS 60
S SWAD RP+R+ YVPPHLR++ P+S P+
Sbjct: 3 SNSWADVSESERAPSGGGWGYS---RPSRTNYVPPHLRSRTPSSEFVAPSPGNNDRGGYG 59
Query: 61 GPRWGSGSRPDFXXXXXXXXXXXXXXXXXXXXXXX--DRREREVNPFGDDVGAEQPVAEE 118
G G G R DRR+ E NPFG+D A+ V E+
Sbjct: 60 GANSGYGGRGQGYGGRGSGYGGRGGPVGGWNARSGGWDRRDTETNPFGNDGNADPAVNEQ 119
Query: 119 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
ENT INF+AYEDIP+ETSG+NVPP VNTFAEIDLGEALNLNI+RCKYVKPTPVQR+AIPI
Sbjct: 120 ENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPI 179
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQ 238
GRDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPRG R VYPLA+IL+PTREL+ Q
Sbjct: 180 LAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQ 239
Query: 239 IHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
IH EA+KFSYQTGVKVVVAYGG P+NQQ+RELERGVDILVATPGRL DLLER RVSLQM+
Sbjct: 240 IHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMV 299
Query: 299 RYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYI 358
R+LALDEADRMLDMGFEPQIRKIVQQMDMPPPG+RQTMLFSATFP+EIQRLASDFL+NYI
Sbjct: 300 RFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYI 359
Query: 359 FLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
FLAVGRVGSSTDLIVQRVEFVH+SDKRSHLMDLLHAQ NG GKQALTLVFVETKKGAD
Sbjct: 360 FLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGAD 419
Query: 419 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 478
+LE+WL +NGFPATTIHGDR+QQERE+ALRSFK+G+TPILVATDVAARGLDIPHVAHVVN
Sbjct: 420 SLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVN 479
Query: 479 FDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYA 538
FDLPNDIDDYVHRIGRTGRAG SGLATAFFN+NN ++A+PL ELMQEANQEVP WL RYA
Sbjct: 480 FDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYA 539
Query: 539 SRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSN-DYYSG 578
SRA++ RDFRR+ SF+RG DYY G
Sbjct: 540 SRASFGGGKNRRSGGRFG-GRDFRRE-SFSRGGGGADYYGG 578
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 2048 (726.0 bits), Expect = 7.0e-212, P = 7.0e-212
Identities = 414/555 (74%), Positives = 454/555 (81%)
Query: 27 RPTRSTYVPPHLRNKPPTSSEPPASSRESTEPAS-GPRWGSGSRPDFXXXXXXXXXXXXX 85
RP S V P N PP+ SR + + G G G R D
Sbjct: 38 RPAASEPVAPLPANDRVGYGGPPSGSRWAPGGSGVGVGGGGGYRADAGRPGSGSGYGGRG 97
Query: 86 XXXXXXXXXX-DRREREVNPFGDDVGAEQPV-AEEENTGINFDAYEDIPVETSGENVPPA 143
DRREREVNPF +D +P E++NT INFDAYEDIP+ETSG+NVPP
Sbjct: 98 GGGWNNRSGGWDRREREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPP 157
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI + GRDLMACAQTGSGKTAAFCFPI
Sbjct: 158 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPI 217
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
ISGIM++Q+VQRPRGSRTVYPLA+IL+PTREL+SQIH EAKKFSYQTGVKVVVAYGG PI
Sbjct: 218 ISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPI 277
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
NQQLRELERGVDILVATPGRL DLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIV+
Sbjct: 278 NQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVE 337
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
QMDMPP G+RQT+LFSATFP+EIQRLA+DFLANYIFLAVGRVGSSTDLIVQRVEFV +SD
Sbjct: 338 QMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSD 397
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
KRSHLMDLLHAQ NG+ GKQALTLVFVETK+GAD+LE+WL +NGFPAT+IHGDRTQQER
Sbjct: 398 KRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQER 457
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
E+AL++FKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL
Sbjct: 458 EVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 517
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRR 563
ATAFFN+ N SLARPL ELMQEANQEVP WL RYASR+++ RDFRR
Sbjct: 518 ATAFFNDGNTSLARPLAELMQEANQEVPEWLTRYASRSSFGGGKNRRSGGRFG-GRDFRR 576
Query: 564 DGSFTRGTSNDYYSG 578
+GSF G+ Y G
Sbjct: 577 EGSF--GSGRGGYGG 589
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/140 (32%), Positives = 54/140 (38%)
Query: 1 MSTSWADXXXXXXXXXXXXXXXXXLPRPTRSTYVPPHLRNKPPTSSEP----PASSREST 56
MS SWAD P+R YVPPHLRN+P +SEP PA+ R
Sbjct: 1 MSASWADVADSENTGSGSSNQNS---HPSRPAYVPPHLRNRP-AASEPVAPLPANDRVGY 56
Query: 57 E-PASGPRW-----------GSGSRPDFXXXXXXXXXXXXXXXXXXXXXXX-DRREREVN 103
P SG RW G G R D DRREREVN
Sbjct: 57 GGPPSGSRWAPGGSGVGVGGGGGYRADAGRPGSGSGYGGRGGGGWNNRSGGWDRREREVN 116
Query: 104 PFGDDVGAEQPVAEEENTGI 123
PF +D +P E++ +
Sbjct: 117 PFENDDSEPEPAFTEQDNTV 136
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 2008 (711.9 bits), Expect = 1.2e-207, P = 1.2e-207
Identities = 416/606 (68%), Positives = 459/606 (75%)
Query: 29 TRSTYVPPHLRNKP--PTSSEPPASSREST--EPASGPRW-----------GSGSRPDFX 73
++ YVPPHLRN+P P ++ P + +PA G RW G G R D
Sbjct: 18 SKPPYVPPHLRNRPSEPVAAPLPQNDHAGYGGQPA-GSRWAPPSSGGGGASGGGYRNDGG 76
Query: 74 XXXXXXXXXXXXXXXXXXXXXX---DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
DRREREVNPFGDD E E+ENTGINFDAYED
Sbjct: 77 RTGYGYGAGGGGGGGGGWNNRSGGWDRREREVNPFGDDAELEPVFTEQENTGINFDAYED 136
Query: 131 IPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQ 190
IPVETSG +VPP VNTFA+IDLG+ALNLNIRRCKYV+PTPVQRHAIPI + RDLMACAQ
Sbjct: 137 IPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQ 196
Query: 191 TGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQT 250
TGSGKTAAFCFPIISGIM++Q+V+RPRGSR VYP A+IL+PTREL+ QIH EAKKFSYQT
Sbjct: 197 TGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQT 256
Query: 251 GVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
GVKVVVAYGG PI+QQLRELERG DILVATPGRL DLLERARVS+QMIR+LALDEADRML
Sbjct: 257 GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRML 316
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFEPQIRKIV+QMDMPP G+RQTMLFSATFP +IQRLA+DF++NYIFLAVGRVGSSTD
Sbjct: 317 DMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTD 376
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
LI QRVEFV ESDKRSHLMDLLHAQ KQ+LTLVFVETK+GAD LE+WL MN FP
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQ--RETQDKQSLTLVFVETKRGADTLENWLCMNEFP 434
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
AT+IHGDRTQQERE+ALRSFK+G+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH
Sbjct: 435 ATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 494
Query: 491 RIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANYXXXXXXX 550
RIGRTGRAGKSG+ATAFFNENN LAR L ELMQEANQEVP WL RYASRA++
Sbjct: 495 RIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASRASFGGGKKRS 554
Query: 551 XXXXXXXARDFRRDGSFTRGTS-------NDYYSGVNXXXXXXXXXXXXXXXXXXXXNHG 603
RDFRR+GS++RG +DYY G G
Sbjct: 555 GGRFG--GRDFRREGSYSRGGGGGGGGGGSDYYGGGGYGGGGYGGAPSGGYGA------G 606
Query: 604 ATSAWD 609
TSAWD
Sbjct: 607 VTSAWD 612
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 1340 (476.8 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 269/474 (56%), Positives = 342/474 (72%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 189 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 248
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 249 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 308
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 309 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 368
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 369 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 428
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A + GK
Sbjct: 429 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATES----GK 484
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 485 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 544
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 545 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 604
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSNDYYS 577
EA QEVP+WL A +Y RD + G S+ +S
Sbjct: 605 VEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFS 658
Score = 59 (25.8 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPR-WGSGSRPD 71
++ Y+PPHLRN+ T + ++ RE ++ R + +G R D
Sbjct: 34 SKGRYIPPHLRNREATKGK--SNCRERSKGRGSIRGFRTGRRLD 75
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 1334 (474.7 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 271/483 (56%), Positives = 347/483 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 145 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 204
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 205 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQY 264
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 324
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 325 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 384
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A GK
Sbjct: 385 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GK 438
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+L LVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 439 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 499 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 558
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX---ARDFRRDG-----SFTRGTSNDY 575
EA QEVP+WL A +Y ARD+R+ SF+ G +++
Sbjct: 559 VEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSGRASNS 618
Query: 576 YSG 578
SG
Sbjct: 619 RSG 621
Score = 65 (27.9 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 29 TRSTYVPPHLRNKPPT-SSEPPASSRESTEPASGPRWGSGS 68
++ Y+PPHLRN+ T +S SSR S + + +GS S
Sbjct: 34 SKGRYIPPHLRNREATKASYDKDSSRWSKDKDAYSSFGSRS 74
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 1339 (476.4 bits), Expect = 1.9e-140, Sum P(2) = 1.9e-140
Identities = 271/478 (56%), Positives = 345/478 (72%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 205
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 265
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 325
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 439
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 440 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 499
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 559
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX----ARDFRRDGSFTRGTSNDYYS 577
EA QEVP+WL A +Y ARD+R+ G+S+ + S
Sbjct: 560 VEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYRQSSG---GSSSSFSS 614
Score = 56 (24.8 bits), Expect = 1.9e-140, Sum P(2) = 1.9e-140
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSD 77
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 1337 (475.7 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 269/474 (56%), Positives = 341/474 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSNDYYS 577
EA QEVP+WL A +Y RD + G S+ +S
Sbjct: 561 VEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFS 614
Score = 56 (24.8 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSD 77
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 1337 (475.7 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 269/474 (56%), Positives = 341/474 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSNDYYS 577
EA QEVP+WL A +Y RD + G S+ +S
Sbjct: 561 VEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFS 614
Score = 56 (24.8 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRSD 77
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 1335 (475.0 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 271/477 (56%), Positives = 343/477 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N ++ + L +L+
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNANITKDLLDLL 560
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX---ARDFRRDGSFTRGTSNDYYS 577
EA QEVP+WL A +Y ARD+R+ G S+ +S
Sbjct: 561 VEAKQEVPSWLENMAYEHHYKGSSRGRSKSRFSGGFGARDYRQSS----GASSSSFS 613
Score = 54 (24.1 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 29 TRSTYVPPHLRNKPPT 44
++ Y+PPHLRN+ T
Sbjct: 34 SKGRYIPPHLRNREAT 49
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 1336 (475.4 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 272/472 (57%), Positives = 343/472 (72%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + F++ID+GE + NI +Y +PTPV
Sbjct: 142 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 201
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GSRTVY 223
Q+HAIPI G RDLMACAQTGSGKTAAF PI+S I + + V + R G R Y
Sbjct: 202 QKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 261
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 262 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 321
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 322 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 381
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V + DKRS L+D+L G G
Sbjct: 382 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGS 435
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 436 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 495
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE NM++ + L +L+
Sbjct: 496 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLL 555
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX----ARDFRRD-GSFTRG 570
EA QEVP+WL A +Y ARD+R+ GS + G
Sbjct: 556 VEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGSSSSG 607
Score = 51 (23.0 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 31 SKGRYIPPHLRNR 43
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 1336 (475.4 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 272/472 (57%), Positives = 343/472 (72%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + F++ID+GE + NI +Y +PTPV
Sbjct: 145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 204
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GSRTVY 223
Q+HAIPI G RDLMACAQTGSGKTAAF PI+S I + + V + R G R Y
Sbjct: 205 QKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 264
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 324
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 325 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 384
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V + DKRS L+D+L G G
Sbjct: 385 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGS 438
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE NM++ + L +L+
Sbjct: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLL 558
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX----ARDFRRD-GSFTRG 570
EA QEVP+WL A +Y ARD+R+ GS + G
Sbjct: 559 VEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGSSSSG 610
Score = 51 (23.0 bits), Expect = 1.3e-139, Sum P(2) = 1.3e-139
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 34 SKGRYIPPHLRNR 46
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 1334 (474.7 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 271/483 (56%), Positives = 347/483 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 205
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQY 265
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 325
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A GK
Sbjct: 386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GK 439
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+L LVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 440 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 499
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 559
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX---ARDFRRDG-----SFTRGTSNDY 575
EA QEVP+WL A +Y ARD+R+ SF+ G +++
Sbjct: 560 VEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSGRASNS 619
Query: 576 YSG 578
SG
Sbjct: 620 RSG 622
Score = 52 (23.4 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 29 TRSTYVPPHLRNKPPTSS-EPPASSRESTEPASGPRWGSGS 68
++ Y+PPHLRN+ + SR S + + +GS S
Sbjct: 34 SKGRYIPPHLRNREAAKAFYDKDGSRWSKDKDAYSSFGSRS 74
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 1331 (473.6 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 268/474 (56%), Positives = 340/474 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSNDYYS 577
EA QEVP+WL A +Y RD + G S+ +S
Sbjct: 561 VEAKQEVPSWLENMAFEHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFS 614
Score = 55 (24.4 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRGD 77
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 1331 (473.6 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 268/474 (56%), Positives = 340/474 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++++GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT------GK 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSNDYYS 577
EA QEVP+WL A +Y RD + G S+ +S
Sbjct: 561 VEAKQEVPSWLENMAFEHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFS 614
Score = 55 (24.4 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGS-GSRPD 71
++ Y+PPHLRN+ T S + + S GSR D
Sbjct: 34 SKGRYIPPHLRNREATKGFYDKDSSGWSSSKDKDAYSSFGSRGD 77
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 1331 (473.6 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 264/436 (60%), Positives = 331/436 (75%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++D+GE + NI +Y +PTPV
Sbjct: 123 EQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPV 182
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPR-GSRTV 222
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R R G R
Sbjct: 183 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQ 242
Query: 223 YPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
YP++L+LAPTREL+ QI+ EA+KF+Y++ V+ V YGGA I QQ+R+LERG +LVATPG
Sbjct: 243 YPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPG 302
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATF 342
RLVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATF
Sbjct: 303 RLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 362
Query: 343 PKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
PKEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A G
Sbjct: 363 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------G 416
Query: 403 KQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATD 462
K +LTLVFVETKKGADALE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT
Sbjct: 417 KDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATA 476
Query: 463 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTEL 522
VAARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L
Sbjct: 477 VAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDL 536
Query: 523 MQEANQEVPAWLNRYA 538
+ EA QEVP+WL A
Sbjct: 537 LVEAKQEVPSWLENMA 552
Score = 54 (24.1 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 29 TRSTYVPPHLRNKPPTS----SEPPASSRESTEPAS-GPRWGSGSRPDF 72
++ Y+PPHLRN+ + S ++SR+ +S G R G++ F
Sbjct: 20 SKGRYIPPHLRNREASKQGFDSGGWSTSRDKDAYSSFGARSDRGAKSSF 68
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 1330 (473.2 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 263/435 (60%), Positives = 330/435 (75%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++D+GE + NI +Y +PTPV
Sbjct: 125 EQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPV 184
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I +R G R Y
Sbjct: 185 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQY 244
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KF+Y++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 245 PISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 304
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 305 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 364
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 365 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GK 418
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGADALE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 419 DSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 478
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 479 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 538
Query: 524 QEANQEVPAWLNRYA 538
EA QEVP+WL A
Sbjct: 539 VEAKQEVPSWLENMA 553
Score = 54 (24.1 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 29 TRSTYVPPHLRNKPPTS----SEPPASSRESTEPAS-GPRWGSGSRPDF 72
++ Y+PPHLRN+ + S ++SR+ +S G R G++ F
Sbjct: 20 SKGRYIPPHLRNREASKQGFDSGGWSTSRDKDAYSSFGARSDRGAKSSF 68
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 1331 (473.6 bits), Expect = 5.7e-139, Sum P(2) = 5.7e-139
Identities = 256/426 (60%), Positives = 333/426 (78%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
NTGINFD YEDIPVE +G+NVPP + +F ++ L E + N+ +Y KPTPVQ+HAIPI
Sbjct: 270 NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPII 329
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV-----YPLALILAPTRE 234
I GRDLMACAQTGSGKTAAF PI++ + +V P+ +R YPL L+LAPTRE
Sbjct: 330 INGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRE 389
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L++QI EAKKF+Y++ ++ V YGG ++Q+REL+RG ++VATPGRL D++ R +V
Sbjct: 390 LATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVG 449
Query: 295 LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFL 354
L+ IR+L LDEADRMLDMGFEPQIR+IV+Q++MPP G RQT++FSATFPK+IQ LASDFL
Sbjct: 450 LENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFL 509
Query: 355 ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGV-HGKQALTLVFVET 413
+NYIFLAVGRVGS+++ I Q + +V+E DKRS+L+DLL + + +G + K +LTL+FVET
Sbjct: 510 SNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLL-SSIRDGPEYTKDSLTLIFVET 568
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHV 473
KKGAD+LE +LY P T+IHGDRTQ+ERE ALR F+SG PILVAT VAARGLDIPHV
Sbjct: 569 KKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHV 628
Query: 474 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAW 533
HV+NFDLP+D+++YVHRIGRTGR G G+AT+FFNE N ++ L EL+ E QE+P++
Sbjct: 629 KHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSF 688
Query: 534 LNRYAS 539
+ +S
Sbjct: 689 MEDMSS 694
Score = 50 (22.7 bits), Expect = 5.7e-139, Sum P(2) = 5.7e-139
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSR 69
T YVPPHLR ++ A+ ES G G SR
Sbjct: 42 TGGVYVPPHLRGGGGNNN---AADAESQGQGQGQGQGFDSR 79
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 1322 (470.4 bits), Expect = 4.0e-138, Sum P(2) = 4.0e-138
Identities = 271/477 (56%), Positives = 344/477 (72%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + +F+++ +GE + NI +Y +PTPV
Sbjct: 147 EQELFSGGNTGINFEKYDDIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPV 206
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYVQRPR--GSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I + + V+ G R Y
Sbjct: 207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQY 266
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGR 326
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+I++Q MPP G+R TM+FSATFP
Sbjct: 327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFP 386
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A G
Sbjct: 387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GT 440
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP DI++YVHRIGRTGR G GLAT+FFNE N+++++ L +L+
Sbjct: 501 AARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLL 560
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX--ARDFRRDGSFTRGTSNDYYSG 578
EA QEVP+WL A +Y ARD+R+ S G S Y SG
Sbjct: 561 VEAKQEVPSWLENMAYEHHYKSSNRGRSRRFSGGFGARDYRQSSS--SG-SFSYSSG 614
Score = 51 (23.0 bits), Expect = 4.0e-138, Sum P(2) = 4.0e-138
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 35 SKGRYIPPHLRNR 47
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 1313 (467.3 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 271/483 (56%), Positives = 346/483 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N P + +F+++++GE + NI +Y +PTPV
Sbjct: 148 EQELFSGGNTGINFEKYDDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPV 207
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I + + V + R G R Y
Sbjct: 208 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 267
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I QQ+R+LERG +LVATPGR
Sbjct: 268 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 327
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 328 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 387
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A GK
Sbjct: 388 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 441
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT V
Sbjct: 442 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 501
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL---ATAFFNENNMSLARPLT 520
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GL AT+FFNE N+++ + L
Sbjct: 502 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLIGLATSFFNERNINITKDLL 561
Query: 521 ELMQEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX-----ARDFRRDGSFTRGTSNDY 575
+L+ EA QEVP+WL A +Y ARD+R+ S T +
Sbjct: 562 DLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSYNRFSGGFGARDYRQSSSSGSSTFSSS 621
Query: 576 YSG 578
+G
Sbjct: 622 RAG 624
Score = 51 (23.0 bits), Expect = 3.5e-137, Sum P(2) = 3.5e-137
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 35 SKGRYIPPHLRNR 47
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 1312 (466.9 bits), Expect = 4.5e-137, Sum P(2) = 4.5e-137
Identities = 269/475 (56%), Positives = 341/475 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + NTGINF+ Y+DIPVE +G N PP + F++I++GE + NI +Y +PTPV
Sbjct: 146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPV 205
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE-------QYVQRPR-GSRTVY 223
Q+HAIPI RDLMACAQTGSGKTAAF PI+S I + + R G R Y
Sbjct: 206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQY 265
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA QQ+R+LERG +LVATPGR
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGR 325
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A GK
Sbjct: 386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GK 439
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE++L+ + T+IHGDR+Q++RE AL F+SG+ PILVAT V
Sbjct: 440 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAV 499
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLL 559
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX---ARDFRRD-GSFTRG-TSN 573
EA QEVP+WL A +Y ARD+R+ GS G SN
Sbjct: 560 VEAKQEVPSWLESMAYEHHYKGSSRGRSKSRFSGGFGARDYRQSSGSANAGFNSN 614
Score = 51 (23.0 bits), Expect = 4.5e-137, Sum P(2) = 4.5e-137
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 35 SKGRYIPPHLRNR 47
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 1286 (457.8 bits), Expect = 4.5e-137, Sum P(2) = 4.5e-137
Identities = 268/470 (57%), Positives = 330/470 (70%)
Query: 118 EENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIP 177
++NTGINF Y+DIPVE SG +VP VNTF L + L NI +Y PTPVQ+++IP
Sbjct: 159 KQNTGINFANYDDIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIP 218
Query: 178 ISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS-------RTVYPLALILA 230
I + GRDLMACAQTGSGKT F FPI+S + P + R YP +LILA
Sbjct: 219 IVMNGRDLMACAQTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILA 278
Query: 231 PTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLER 290
PTREL SQI EA+KF+Y++ V+ V YGGA I QLR++ERG D+LVATPGRLVDL+ER
Sbjct: 279 PTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIER 338
Query: 291 ARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLA 350
R+SL I+YL LDEADRMLDMGFEPQIR+IV+ DMP RQT++FSATFP++IQ LA
Sbjct: 339 GRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLA 398
Query: 351 SDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL +Y+FL+VGRVGS+++ I Q+VE+V + DKRS L+D+LH HG LTL+F
Sbjct: 399 RDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHT------HGTTGLTLIF 452
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETK+ ADAL +L FPAT IHGDRTQ+ERE AL F+SG+ PILVAT VAARGLDI
Sbjct: 453 VETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDI 512
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
P+V HV+N+DLP DIDDYVHRIGRTGRAG +G+ATAFFN N + R L +L++EA+QEV
Sbjct: 513 PNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEV 572
Query: 531 PAWLNRYASRAN-YXXXXXXXXXXXXXXA-RDFRRDGSFTRGTSNDYYSG 578
P++L A + Y A RD RR G G + Y G
Sbjct: 573 PSFLESIAREGSGYGGRGGRGGRGRGANATRDMRRMGGGMGGPPS--YGG 620
Score = 77 (32.2 bits), Expect = 4.5e-137, Sum P(2) = 4.5e-137
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 26 PRPTRSTYVPPHLR------NKPPTSSEPPASSRESTEPASGPR---WGSGSRPDF 72
P R+ Y+PPHLR N S+ PP + S GPR W + + PDF
Sbjct: 25 PSGGRAAYIPPHLRQRQVNANGDGASAPPPGPTGGSWGGPRGPRGGNWANANAPDF 80
Score = 40 (19.1 bits), Expect = 3.7e-133, Sum P(2) = 3.7e-133
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 98 REREVNPFGDDVGAEQP 114
R+R+VN GD A P
Sbjct: 38 RQRQVNANGDGASAPPP 54
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 1302 (463.4 bits), Expect = 5.8e-137, Sum P(2) = 5.8e-137
Identities = 265/484 (54%), Positives = 343/484 (70%)
Query: 97 RREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEAL 156
R E P + E + NTGINF+ Y+DIPVE +G N P ++ F ++++GE +
Sbjct: 160 RDEDWSKPLPPNERLEHELFSGSNTGINFEKYDDIPVEATGHNGPQPIDRFHDLEMGEII 219
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE---QYV 213
NI +Y +PTPVQ+HAIPI RDLMACAQTGSGKTAAF P++S I + + +
Sbjct: 220 MGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEAL 279
Query: 214 QRPR---------GSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN 264
Q + G R YP++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA I
Sbjct: 280 QAAKNSAQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIG 339
Query: 265 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
QQ+R+LERG +LVATPGRL+D++ER ++ L YL LDEADRMLDMGFEPQIR+IV+Q
Sbjct: 340 QQIRDLERGCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQ 399
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
MPP G+RQTM+FSATFPKEIQ LA DFL +YIFLAVGRVGS+++ I Q+V +V E+DK
Sbjct: 400 DTMPPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDK 459
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERE 444
RS L+DLL+A GK +LTLVFVETKKGADALE +LY G+ T+IHGDR+Q++RE
Sbjct: 460 RSFLLDLLNAT------GKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDRE 513
Query: 445 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 504
AL F+SG+ PILVAT VAARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLA
Sbjct: 514 EALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLA 573
Query: 505 TAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX--ARDFR 562
T+FFN+ N ++ + L +++ EA QEVP+WL A + ARD+R
Sbjct: 574 TSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHKSSSRGRSKRFSGGFGARDYR 633
Query: 563 RDGS 566
++ S
Sbjct: 634 QNSS 637
Score = 60 (26.2 bits), Expect = 5.8e-137, Sum P(2) = 5.8e-137
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 29 TRSTYVPPHLRNKPPTSSEPP 49
T Y+PPHLRNK ++ P
Sbjct: 30 TGRRYIPPHLRNKEAAKNDAP 50
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 1270 (452.1 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 259/467 (55%), Positives = 332/467 (71%)
Query: 119 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
+++GINFD Y+DIPVE SG+ VP + +F L E L NI+ ++ KPTPVQ++++PI
Sbjct: 160 QSSGINFDNYDDIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPI 219
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR---------GSRTVYPLALIL 229
GRDLMACAQTGSGKT F FP++S E Y++ P S VYP L++
Sbjct: 220 VAAGRDLMACAQTGSGKTGGFLFPVLS----ESYMKGPAPVPESNGAFSSHKVYPTILVM 275
Query: 230 APTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
APTREL SQI+ E+KKFSY++ V+ V YGGA I QQ+R ++RG D+LVATPGRL DLL+
Sbjct: 276 APTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLD 335
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R +VSL IRYL LDEADRMLDMGFEPQIR IV++ DMP RQT++FSATFP++IQ L
Sbjct: 336 RGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQML 395
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
A DFL +Y+FL+VGRVGS+++ I Q++ +V + +K+S ++DLL A NG LT+V
Sbjct: 396 ARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLLSAN-ENG------LTIV 448
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 469
F ETK+ AD L +LY GFPAT IHGDR+Q ERE AL +FK+G PILVAT VAARGLD
Sbjct: 449 FTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLD 508
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQE 529
IP+V+HV+N+DLP+DIDDYVHRIGRTGRAG G+ATAFFN NN ++ + L EL+ EANQE
Sbjct: 509 IPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSEANQE 568
Query: 530 VPAWLNRYASRANYXXXXXXXXXXXXXX--ARDFRRDGSFTRGTSND 574
VP +L + A + +RDFRR G+ G S +
Sbjct: 569 VPDFLTKIAREGAFGKMTRGGGRGGSSRGPSRDFRRSGNSGWGNSGN 615
Score = 78 (32.5 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 27 RPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWG 65
R RS YVPPHLRN+ ++ +SS S P G + G
Sbjct: 27 RGGRSQYVPPHLRNRQGGGNQSGSSSESSDVPFGGSQRG 65
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 1286 (457.8 bits), Expect = 2.2e-135, Sum P(2) = 2.2e-135
Identities = 256/440 (58%), Positives = 329/440 (74%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + NTGINF+ Y+DIPVE +G N P + +F ++D+GE + NI +Y +PTPV
Sbjct: 190 EHELFSASNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPV 249
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE---QYVQRPRGS--------- 219
Q++AIPI RDLMACAQTGSGKTAAF P++S I E + +Q + S
Sbjct: 250 QKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYV 309
Query: 220 -RTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
R YP++L+LAPTREL+ QI+ EA+KF+Y++ V+ V YGGA I QQ+R+LERG +LV
Sbjct: 310 RRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 369
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRLVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G RQTM+F
Sbjct: 370 ATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMF 429
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVAN 398
SATFPKEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A
Sbjct: 430 SATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNAT--- 486
Query: 399 GVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 458
GK +LTLVFVETKKGADALE +LY G+ T+IHGDR+Q++RE AL F+SG+ PI+
Sbjct: 487 ---GKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIM 543
Query: 459 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARP 518
VAT VAARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+F+N+ N ++ +
Sbjct: 544 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITKD 603
Query: 519 LTELMQEANQEVPAWLNRYA 538
L +++ EA QEVP+WL A
Sbjct: 604 LLDILVEAKQEVPSWLENLA 623
Score = 61 (26.5 bits), Expect = 2.2e-135, Sum P(2) = 2.2e-135
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 29 TRSTYVPPHLRNKPPTSSEPP 49
T Y+PPHLRNK + ++ P
Sbjct: 31 TGRRYIPPHLRNKDASKNDSP 51
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 1295 (460.9 bits), Expect = 2.8e-135, Sum P(2) = 2.8e-135
Identities = 261/474 (55%), Positives = 337/474 (71%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + N GINF+ Y+DIPVE +G N PP + F+++++GE + NI +Y +PTPV
Sbjct: 140 EQELFSGGNAGINFEKYDDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPV 199
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE-------QYVQRPR-GSRTVY 223
Q+HAIPI RDLMACAQTGSG TAAF PI+S I + + R G R Y
Sbjct: 200 QKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQY 259
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P++L+LAPTREL+ QI+ EA+KFSY++ V+ V YGGA QQ+R+LERG +LVATPGR
Sbjct: 260 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGR 319
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
LVD++ER ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFP
Sbjct: 320 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 379
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
KEIQ LA DFL YIFLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A G+
Sbjct: 380 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GR 433
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+LTLVFVETKKGAD+LE++L+ + T+IHGDR+Q++RE AL F+SG+ PILVAT V
Sbjct: 434 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAV 493
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE N+++ + L +L+
Sbjct: 494 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLL 553
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXX---ARDFRRDGSFTRGTSND 574
EA QEVP+WL A +Y ARD+R+ + N+
Sbjct: 554 VEAKQEVPSWLESMAYEHHYKGNSRGRSKSRFSGGFGARDYRQSSGYANSGFNN 607
Score = 51 (23.0 bits), Expect = 2.8e-135, Sum P(2) = 2.8e-135
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 31 SKGRYIPPHLRNR 43
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 1252 (445.8 bits), Expect = 6.8e-132, Sum P(2) = 6.8e-132
Identities = 254/457 (55%), Positives = 325/457 (71%)
Query: 119 ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
+++GINFD Y+DIPV+ SG++VP + F L L NI+ ++ KPTPVQ++++PI
Sbjct: 116 QSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPI 175
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP--RGS---RTVYPLALILAPTR 233
GRDLMACAQTGSGKT F FP++S + +P +GS R YP A+I+APTR
Sbjct: 176 VANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTR 235
Query: 234 ELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARV 293
EL++QI EAKKF+Y++ VK V YGG+PI QLRE+ERG D+LVATPGRL DLLER ++
Sbjct: 236 ELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKI 295
Query: 294 SLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDF 353
SL ++YL LDEADRMLDMGFEPQIR IV+ DM P G RQT++FSATFP +IQ LA DF
Sbjct: 296 SLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDF 355
Query: 354 LANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVET 413
L++YIFL+VGRVGS+++ I Q+V +V DK+S L+DLL A +G LTL+FVET
Sbjct: 356 LSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSAST-DG------LTLIFVET 408
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHV 473
K+ AD L +L M F AT IHGDRTQ ERE AL +F+SG +LVAT VAARGLDIP+V
Sbjct: 409 KRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNV 468
Query: 474 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAW 533
HV+N+DLP+D+DDYVHRIGRTGRAG +GLATAFFN N ++ + L E++ EANQEVP++
Sbjct: 469 THVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSF 528
Query: 534 LNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRG 570
L A RD+R+ G + G
Sbjct: 529 LKDAMMSAPGSRSNSRRGGFGRNNNRDYRKAGGASAG 565
Score = 438 (159.2 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 93/170 (54%), Positives = 114/170 (67%)
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 465
LTL+FVETK+ AD L +L M F AT IHGDRTQ ERE AL +F+SG +LVAT VAA
Sbjct: 401 LTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAA 460
Query: 466 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQE 525
RGLDIP+V HV+N+DLP+D+DDYVHRIGRTGRAG +GLATAFFN N ++ + L E++ E
Sbjct: 461 RGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTE 520
Query: 526 ANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSNDY 575
ANQEVP++L A +R R G F R + DY
Sbjct: 521 ANQEVPSFLKDAMMSAP--------------GSRSNSRRGGFGRNNNRDY 556
Score = 62 (26.9 bits), Expect = 6.8e-132, Sum P(2) = 6.8e-132
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 33 YVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGS 68
YVPPHLR KP ++ ++ + +G R G GS
Sbjct: 21 YVPPHLRGKPRSARNNSSNYNNNNGGYNGGR-GGGS 55
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 1214 (432.4 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
Identities = 255/475 (53%), Positives = 326/475 (68%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
+TGINF+ Y+DIPVE SG ++ P VN F L L NI+ Y +PTPVQ+++IPI
Sbjct: 145 STGINFEKYDDIPVEVSGGDIEP-VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIV 203
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIIS--------GIMREQYVQRPRGSRTVYPLALILAP 231
GRDLMACAQTGSGKTA F FPI+S + +Q R YP LILAP
Sbjct: 204 TSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAP 263
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL QIH E++KF Y++ V+ YGGA I Q+R++++G D+L ATPGRLVDL++R
Sbjct: 264 TRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRG 323
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
R+SL I++L LDEADRMLDMGFEPQIR IV+ DM RQT++FSATFP++IQ LA
Sbjct: 324 RISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLAR 383
Query: 352 DFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFV 411
DFL +Y+FL+VGRVGS+++ I Q+V V +S+KRS+L+D+LH G LTL+FV
Sbjct: 384 DFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEG------LTLIFV 437
Query: 412 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 471
ETK+ AD L +L + FPAT+IHGDRTQ+ERE AL F+SG+T I+VAT VA+RGLDIP
Sbjct: 438 ETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIP 497
Query: 472 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVP 531
+V HV+N+DLP DIDDYVHRIGRTGRAG +G A AFFN NN +A+ L EL+QEANQE P
Sbjct: 498 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECP 557
Query: 532 AWLNRYASRANYXXXXXXXXXXX-------XXXARDFRRDGSFTRG-TSNDYYSG 578
++L A +++ ARDFRR + + G +S YSG
Sbjct: 558 SFLIAMARESSFGGNGRGGRYSGRGGRGGNAYGARDFRRPTNSSSGYSSGPSYSG 612
Score = 57 (25.1 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 25 LPRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPR 63
+ RP + Y+PP R+KP + P ES R
Sbjct: 24 ISRPRK--YIPPFARDKPSAGAAPAVGDDESVSSRGSSR 60
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 262/471 (55%), Positives = 332/471 (70%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
++GI FD Y++IPV+ SG++VP + F+ L E L NI+ + KPTPVQ+++IPI
Sbjct: 129 SSGIKFDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIV 188
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG-----SRTVYPLALILAPTRE 234
GRDLMACAQTGSGKT F FP+ + + R P SR YP AL+LAPTRE
Sbjct: 189 TKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRE 248
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L++QI EA+KF+Y++ V+ V YGGAPI Q+RE++RG D+LVATPGRL DLLER +VS
Sbjct: 249 LATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVS 308
Query: 295 LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFL 354
L I+YL LDEADRMLDMGFEPQIR IV++ DMP RQT++FSATFP +IQ LA DFL
Sbjct: 309 LANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFL 368
Query: 355 ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETK 414
NYIFL+VGRVGS+++ I QR+ +V + DK+S L+DLL A+ H + LTL+FVETK
Sbjct: 369 DNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAE-----H--KGLTLIFVETK 421
Query: 415 KGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVA 474
+ AD L +L M F AT IHGDRTQ ERE AL +FK+ ILVAT VAARGLDIP+V
Sbjct: 422 RMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVT 481
Query: 475 HVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWL 534
HV+N+DLP+DIDDYVHRIGRTGRAG +G+AT+FFN NN ++ + L E++ EANQEVP +L
Sbjct: 482 HVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFL 541
Query: 535 N---RYASRANYXXXXXXXXXXXXXXARDFRR---DGSF--TR----GTSN 573
+ R SR +RD+R+ +GSF TR GTSN
Sbjct: 542 SDLSRQNSRGGRTRGGGGFFNSRNNGSRDYRKHGGNGSFGSTRPRNTGTSN 592
Score = 249 (92.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 70/209 (33%), Positives = 99/209 (47%)
Query: 30 RSTYVPPHLRN--KPPTSSEPPASSRESTEPASGPRWG--SGSRPDFXXXXXXXXXXXXX 85
+S+YVPPHLR+ KP P + T R G +G+ F
Sbjct: 24 KSSYVPPHLRSRGKPSFERSTPKQEDKVTGGDFFRRAGRQTGNNGGFFGFSKERNGGTSA 83
Query: 86 XXXXXXXXXXDRR-EREVN------PFGDDVGAEQPVAEEE----NTGINFDAYEDIPVE 134
R VN P + AE ++ ++GI FD Y++IPV+
Sbjct: 84 NYNRGGSSNYKSSGNRWVNGKHIPGPKNAKLEAELFGVHDDPDYHSSGIKFDNYDNIPVD 143
Query: 135 TSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSG 194
SG++VP + F+ L E L NI+ + KPTPVQ+++IPI GRDLMACAQTGSG
Sbjct: 144 ASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSG 203
Query: 195 KTAAFCFPIISGIMREQYVQRPRGSRTVY 223
KT F FP+ + + R P +++ Y
Sbjct: 204 KTGGFLFPLFTELFRSGPSPVPEKAQSFY 232
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 1179 (420.1 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 262/509 (51%), Positives = 326/509 (64%)
Query: 35 PPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSRPDFXXXXXXXXXXXXXXXXXXXXXX 94
PP R + S + SR + G R GSGS F
Sbjct: 140 PP--RGNSYSYSPNNSFSRGGNQGGYGNRGGSGS--SFGKPANKNDRYYDRWSNFRDSRN 195
Query: 95 XDRREREVNPFGDDVGAEQPVAEEENTGINFDAYED--IPVETSGENVPPAVNTFAEIDL 152
+RE + E ++N GI+F+AY+D I +ETS E++ +N+FA++DL
Sbjct: 196 HPEMKREFIDLEEHKAEEIFKKNDDNIGIDFNAYDDDDISIETS-EHICAPLNSFADVDL 254
Query: 153 GEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQY 212
G+ L NI+ KY KPTPVQ+ A+PI + RDLMACAQTGSGKTAAF FPIISGI+ +
Sbjct: 255 GDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILLDGA 314
Query: 213 VQRPRG-----SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQL 267
+ P R P AL+LAPTREL+ QI EA KFSY + V VV YGGA + Q+
Sbjct: 315 PEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYGGAEVFHQI 374
Query: 268 RELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM 327
EL+RG DILVAT GRLVDLL R RVSL I+YL LDEADRMLDMGFEPQIR+I+ + DM
Sbjct: 375 NELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDM 434
Query: 328 PPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSH 387
P RQT++FSATFPK+IQ LA+DFL NYIFL VG VG+ T I QR+E+V E DK S+
Sbjct: 435 PGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGT-TQNITQRIEYVVEEDKNSY 493
Query: 388 LMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELAL 447
L+D L ++G L L+FVETK+ D L ++L FP T IHGD TQ ERE AL
Sbjct: 494 LLDYLSGLKSDG------LCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENAL 547
Query: 448 RSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAF 507
+SF+S TP LVATD+A+RGL I +V V+NFDLP DI YVHRIGRTGRAGK GLA +F
Sbjct: 548 QSFRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISF 607
Query: 508 FNENNMSLARPLTELMQEANQEVPAWLNR 536
FNE N + L +LM+ +NQ++P W +
Sbjct: 608 FNEKNKPVGAELLKLMKASNQDIPDWFEK 636
Score = 47 (21.6 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 29 TRSTYVPPHLRNKPPTSSEPPASSRE 54
T YVPP RNK SS SSR+
Sbjct: 41 TSEPYVPPSRRNKMNNSS---GSSRD 63
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 1142 (407.1 bits), Expect = 3.7e-118, Sum P(2) = 3.7e-118
Identities = 231/435 (53%), Positives = 310/435 (71%)
Query: 108 DVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVK 167
D EQ + + +GINFD YE+IPVE +G++VP ++ F+++ L E + NI+ Y +
Sbjct: 194 DERIEQELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDR 253
Query: 168 PTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYVQRPRGSRT 221
PTPVQ+++IP GGRDLM+CAQTGSGKTAAF P+++ I+++ + V G +
Sbjct: 254 PTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKK 313
Query: 222 VYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAP-INQQLRELERGVDILVAT 280
YP AL+L+PTRELS QI E++KF+Y+T + + YGG Q+ +L G IL+AT
Sbjct: 314 QYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIAT 373
Query: 281 PGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSA 340
PGRL+D++++ + ++ RYL LDEADRMLDMGFEPQIR+IV+ MP R T +FSA
Sbjct: 374 PGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSA 433
Query: 341 TFPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANG 399
TFPKEIQ LA DFL NY+FLAVGRVGS+++ I+Q++ +V E +KRS+LMDLL A
Sbjct: 434 TFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDAT---- 489
Query: 400 VHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILV 459
G +LTLVFVETK+GA L ++L + TIHGD Q ERE L F++G PILV
Sbjct: 490 --GDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILV 547
Query: 460 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPL 519
AT VAARGLDIP+V HV+N+DLP+D+D+YVHRIGRTGR G GLAT+FFN+ N ++AR L
Sbjct: 548 ATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIAREL 607
Query: 520 TELMQEANQEVPAWL 534
+L+ EANQE+P WL
Sbjct: 608 MDLIVEANQELPDWL 622
Score = 42 (19.8 bits), Expect = 3.7e-118, Sum P(2) = 3.7e-118
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 33 YVPPHLR 39
YVPPHLR
Sbjct: 22 YVPPHLR 28
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 251/479 (52%), Positives = 317/479 (66%)
Query: 111 AEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTP 170
+E + ++GINFD YE+IPVE SG++VP A+ F E G A+ N+ R Y KPTP
Sbjct: 105 SESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTP 164
Query: 171 VQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMR--EQYVQRP---RGSRTVYPL 225
VQ+H+IP + RDLM+CAQTGSGKTAAF PII I+ V+ P G RT YP
Sbjct: 165 VQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPC 224
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAP-INQQLRELERGVDILVATPGRL 284
AL+L+PTREL+ QIH EA KFSY++ ++ + YGG Q+ L G IL+ATPGRL
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D++E+ + L RYL LDEADRMLDMGFEPQIRKIV Q MPP R T +FSATFPK
Sbjct: 285 IDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQ-GMPPKTARTTAMFSATFPK 343
Query: 345 EIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
EIQ LA DFL NYIFLAVGRVGS+++ I QR+ +V+E +KRS+LM++L + H +
Sbjct: 344 EIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNE-----HSE 398
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
L LVFVETK+GA+ L ++L + +IHGD Q ERE L F+SG+ PILVAT V
Sbjct: 399 N-LVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAV 457
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
AARGLDIP+V HV+N+DLP D D+YVHRIGRTGR G G+AT+FFN+ N + R L L+
Sbjct: 458 AARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLI 517
Query: 524 QEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFR----RDGSFTRGTSNDYYSG 578
E+NQEVP WL++ A+ A D+R GSF SN Y SG
Sbjct: 518 VESNQEVPEWLHQVAAEGRIGGGQRGGNRRFG--ATDYRVGRGGGGSFGGNFSN-YNSG 573
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 234/458 (51%), Positives = 303/458 (66%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + GINFD Y+DI V+ SG N+P A+ TF E L E+L NI R YVKPTPV
Sbjct: 148 EDSIFSHYKMGINFDKYDDILVDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPV 207
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q++ +PI GRDLMACAQTGSGKTAAF PI+ +M + V R S P A+I+AP
Sbjct: 208 QKYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADG-VAASRFSEIQEPEAVIVAP 266
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI+ EA+KFS+ T V+ VV YGG Q+RE+E+G ++L TPGRL+D++ R
Sbjct: 267 TRELINQIYQEARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRG 326
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
+V L +R+L LDEADRMLDMGFEP +R++V MP RQT++FSATFP++IQRLA+
Sbjct: 327 KVGLSKVRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAA 386
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL +Y+F+AVG VG + + Q V + +KR L+DLL G + T+VF
Sbjct: 387 DFLKVDYLFVAVGVVGGACTDVEQTFLQVTKFNKREQLLDLLRTI------GSER-TMVF 439
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETK+ AD + +L P T+IHGDR Q+ERE AL F+SGK P+LVAT VA+RGLDI
Sbjct: 440 VETKRQADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLVATSVASRGLDI 499
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQE 529
P V HVVNFDLPN IDDYVHRIGRTGR G +G A +F++ + + LAR L ++ +A QE
Sbjct: 500 PDVQHVVNFDLPNTIDDYVHRIGRTGRCGNTGRAVSFYDPDVDSQLARSLVGILAKAQQE 559
Query: 530 VPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSF 567
VP+WL A A+ + D R+ GSF
Sbjct: 560 VPSWLEESAFGAH--GSAAFNPSGRTFASTDSRKGGSF 595
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 231/458 (50%), Positives = 299/458 (65%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+DI V+ SG N P A+ TF E L ++L+ N+ + YVKPTPV
Sbjct: 244 ESSIFSHYATGINFDKYDDILVDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPV 303
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H IPI GRDLMACAQTGSGKTAAF PI+ M + V + S P A+I+AP
Sbjct: 304 QKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDG-VAASKFSEIQEPEAIIVAP 362
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KF+Y T V+ VV YGG +RE+ +G ++L ATPGRL DL+ R
Sbjct: 363 TRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRG 422
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L +RYL LDEADRMLDMGFEP++RK+V MP RQT++FSAT+P++IQR+A+
Sbjct: 423 KIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAA 482
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL +YIFLAVG VG + + Q V V + KR L++LL A G + T+VF
Sbjct: 483 DFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLELLRAT------GNER-TMVF 535
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETK+ AD + +L T+IHGDR Q+ERE AL F+ G P+LVAT VAARGLDI
Sbjct: 536 VETKRSADFIATFLCQEKISTTSIHGDREQREREKALSDFRLGHCPVLVATSVAARGLDI 595
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
V HVVNFD+P+ ID+YVHRIGRTGR G +G A +FFN E++ LAR L +++ A Q
Sbjct: 596 EQVQHVVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLARSLVKVLSGAQQV 655
Query: 530 VPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSF 567
VP WL A A+ + D R+ GSF
Sbjct: 656 VPKWLEEVAFSAH--GTTGFNPRGKVFASTDSRKGGSF 691
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 217/429 (50%), Positives = 300/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 257 EDSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 316
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI GGRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 317 QKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 375
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 376 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKE 435
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA
Sbjct: 436 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 495
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 496 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TMVF 548
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 549 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 608
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 609 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQQD 668
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 669 VPAWLEEIA 677
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 217/429 (50%), Positives = 300/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 257 EDSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 316
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI GGRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 317 QKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 375
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 376 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKE 435
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA
Sbjct: 436 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 495
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 496 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TMVF 548
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 549 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 608
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 609 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQQD 668
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 669 VPAWLEEIA 677
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 217/429 (50%), Positives = 299/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 229 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 288
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 289 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 347
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 348 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 407
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 408 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 467
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 468 EFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILR-----NIGDER--TMVF 520
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 521 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 580
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 581 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQD 640
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 641 VPAWLEEIA 649
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 1055 (376.4 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 209/429 (48%), Positives = 303/429 (70%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + + +GINFD Y++I V+ +G++VPPA+ TF E +L E L N+ R YVK TPV
Sbjct: 241 EDNIFRQYQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPV 300
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IPI + GRDLMACAQTGSGKTAAF PI+S +M E + + + P A+I+AP
Sbjct: 301 QKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEG-ITASQYLQLQEPEAIIIAP 359
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI+++A+KFSY T V+ VV YGG +R++E+G +IL ATPGRL+D++ +
Sbjct: 360 TRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKE 419
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L +RYL LDEADRMLDMGF P+I K++ + MP RQT++FSAT+P+EI+RLAS
Sbjct: 420 KIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLAS 479
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
++L + ++F+ VG VG + + Q V + E+ K L+++L + ++ T++F
Sbjct: 480 NYLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKMEKLLEILKSS-------EKERTMIF 532
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
V TKK AD + +L F +T+IHGDR Q +RE AL F++GK ++V T VAARGLDI
Sbjct: 533 VNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAARGLDI 592
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+N+D+P ++D+YVHRIGRTGR G +G AT+FFN +++ +ARPL +++ +A+QE
Sbjct: 593 ENVQHVINYDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDHVIARPLVKILTDAHQE 652
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 653 VPAWLEEIA 661
Score = 38 (18.4 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 27 RPTRSTYVPPHLRNKPPTSSE 47
+P + TY+PP PP E
Sbjct: 226 KPKKVTYIPP-----PPPDGE 241
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 216/429 (50%), Positives = 299/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 256 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 315
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 316 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 374
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 375 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKE 434
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA
Sbjct: 435 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 494
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + G + T+VF
Sbjct: 495 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRSI------GDER-TMVF 547
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 548 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 607
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 608 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLAQPLVKVLSDAQQD 667
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 668 VPAWLEEIA 676
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 217/429 (50%), Positives = 300/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 235 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 294
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 295 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 353
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 354 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 413
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 414 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 473
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V V + KR L+++L + ++ T+VF
Sbjct: 474 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TMVF 526
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 527 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDI 586
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 587 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQD 646
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 647 VPAWLEEIA 655
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 217/429 (50%), Positives = 300/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 255 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 314
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 315 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 373
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 374 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 433
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 434 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 493
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V V + KR L+++L + ++ T+VF
Sbjct: 494 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TMVF 546
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 547 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDI 606
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 607 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQD 666
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 667 VPAWLEEIA 675
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
Identities = 216/429 (50%), Positives = 299/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 228 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 287
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 288 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 346
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 347 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKE 406
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 407 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 466
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
DFL ++Y+F+AVG+VG + + Q + V + KR L+++L + ++ T+VF
Sbjct: 467 DFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TMVF 519
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 520 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 579
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ +++ LA+PL +++ +A Q+
Sbjct: 580 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQQD 639
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 640 VPAWLEEIA 648
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 216/429 (50%), Positives = 299/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 253 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 312
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 313 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 371
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 372 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 431
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 432 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 491
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V + KR L+++L + ++ T+VF
Sbjct: 492 EFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEILR-----NIGDER--TMVF 544
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 545 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDI 604
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 605 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQD 664
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 665 VPAWLEEIA 673
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 215/429 (50%), Positives = 299/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGI+FD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 256 EDSIFAHYQTGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 315
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + P +I+AP
Sbjct: 316 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASCFKELQEPECIIVAP 374
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 375 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 434
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 435 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 494
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q V V + KR L+++L + ++ T+VF
Sbjct: 495 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TMVF 547
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 548 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 607
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 608 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQD 667
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 668 VPAWLEEIA 676
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 214/429 (49%), Positives = 297/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 240 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 299
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 300 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 358
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 359 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 418
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 419 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 478
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V K+ L+++L + ++ + VF
Sbjct: 479 EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILR-----NIGDERPM--VF 531
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 532 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 591
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NF+LP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 592 ENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQD 651
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 652 VPAWLEEIA 660
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 214/429 (49%), Positives = 297/429 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 240 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 299
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+AP
Sbjct: 300 QKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAP 358
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG +R++ +G +IL ATPGRL+D++ +
Sbjct: 359 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 418
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT+LFSATFP+EIQRLA
Sbjct: 419 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 478
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V K+ L+++L + ++ + VF
Sbjct: 479 EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILR-----NIGDERPM--VF 531
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 532 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 591
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQE 529
+V HV+NF+LP+ ID+YVHRIGRTGR G +G A +FF+ E++ LA+PL +++ +A Q+
Sbjct: 592 ENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQD 651
Query: 530 VPAWLNRYA 538
VPAWL A
Sbjct: 652 VPAWLEEIA 660
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 213/435 (48%), Positives = 301/435 (69%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + + TGINFD Y+DI VE SG +VPPA+ TF E +L ++L N+ + YVK TP+
Sbjct: 253 ESDIFKHYQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPI 312
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IPI + GRDLMACAQTGSGKTAAF PI++ +M + V+ P A+I+AP
Sbjct: 313 QKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKG-VESSAFQTLKEPEAIIVAP 371
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI+++A+KFSY T V+ VV YGG + L+++ G +IL ATPGRL+D++ +
Sbjct: 372 TRELINQIYLDARKFSYGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKE 431
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L +RYL LDEADRMLDMGF I +++ MP RQT++FSATFP IQ LA
Sbjct: 432 KIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAR 491
Query: 352 DFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+ L +Y+F+ VG+VG + + Q V V E K+ LM++L ++ G + T+VF
Sbjct: 492 EILKPDYLFVVVGQVGGACSDVEQMVIEVDEFGKKDKLMEILQ-EI-----GSER-TMVF 544
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
V+TKK AD + +L P+T+IHGDR Q+ERE ALR F++G+ P++VAT VAARGLDI
Sbjct: 545 VKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDI 604
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN---ENNMSLARPLTELMQEAN 527
+V++V+NFD+P+DID+YVHRIGRTGR G +G A +FF+ ++ +AR L +++ +A+
Sbjct: 605 ENVSYVINFDIPDDIDEYVHRIGRTGRCGNTGRAISFFDKRGDDEQRIARSLVKVLSDAH 664
Query: 528 QEVPAWLNRYASRAN 542
QEVPAWL A A+
Sbjct: 665 QEVPAWLEEVAFSAH 679
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 211/435 (48%), Positives = 292/435 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + +GINFD Y++ VE SG + P + F E + + L NI + Y K TPV
Sbjct: 134 EQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV 193
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IP+ GRDLM+CAQTGSGKTAAF PI+ +M++ V + P +I+AP
Sbjct: 194 QKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDG-VTASAFQKQQEPQCIIVAP 252
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI +EA+KF Y T ++ VV YGG +R++ +G +IL ATPGRL+D++E+
Sbjct: 253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++SL ++YL LDEADRMLDMGF ++K++ +MP RQT++FSATFP+E+QRLA
Sbjct: 313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372
Query: 352 DFL-ANYIFLAVGRV-GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
+FL +YIFL +G G+ +D + Q + V KR L+++L + G G++ T+V
Sbjct: 373 EFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQS---TG--GER--TMV 424
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 469
FV+TKK AD L +L P+T+IHGDR Q+ERE+ALR F+SGK ILVAT VA+RGLD
Sbjct: 425 FVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLD 484
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMS-LARPLTELMQEANQ 528
I +V HV+NFDLPN I+DYVHRIGRTGR G +G A +FF++ + L + L +++ EA Q
Sbjct: 485 IENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQSLLKVLSEAQQ 544
Query: 529 EVPAWLNRYA-SRAN 542
EVP WL A R N
Sbjct: 545 EVPVWLEEMAVQRTN 559
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 210/424 (49%), Positives = 283/424 (66%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E+ TGINFD Y+ I VE SG + PPA+ TF E DL + LN +I + Y K TPV
Sbjct: 233 EEATFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPV 292
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q++ IPI + GRDLMACAQTGSGKTAAF PI++ +MR+ V R P +I+AP
Sbjct: 293 QKYGIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-VTASRFKDQQEPECIIVAP 351
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI +EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 352 TRELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKE 411
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK-EIQRLA 350
++ L IRYL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+ + A
Sbjct: 412 KIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWA 471
Query: 351 SDFLANYIF--LAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTL 408
+FL N +AVG+VG + + Q V V + KR L+++L N G++ T+
Sbjct: 472 GEFLKNLTICLVAVGQVGGACSDVQQTVLQVGQYSKREKLVEILR----N--IGEER-TM 524
Query: 409 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 468
VFVETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGL
Sbjct: 525 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 584
Query: 469 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEAN 527
DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E + LA+PL +++ +A
Sbjct: 585 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGKAISFFDPEPDSHLAQPLVKVLSDAQ 644
Query: 528 QEVP 531
Q P
Sbjct: 645 QGCP 648
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 202/418 (48%), Positives = 283/418 (67%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
EQ + +GINFD Y++ VE SG + P + F E + + L NI + Y K TPV
Sbjct: 134 EQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV 193
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+H+IP+ GRDLM+CAQTGSGKTAAF PI+ +M++ V + P +I+AP
Sbjct: 194 QKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDG-VTASAFQKQQEPQCIIVAP 252
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI +EA+KF Y T ++ VV YGG +R++ +G +IL ATPGRL+D++E+
Sbjct: 253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++SL ++YL LDEADRMLDMGF ++K++ +MP RQT++FSATFP+E+QRLA
Sbjct: 313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372
Query: 352 DFL-ANYIFLAVGRV-GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
+FL +YIFL +G G+ +D + Q + V KR L+++L + G G++ T+V
Sbjct: 373 EFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQS---TG--GER--TMV 424
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 469
FV+TKK AD L +L P+T+IHGDR Q+ERE+ALR F+SGK ILVAT VA+RGLD
Sbjct: 425 FVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLD 484
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMS-LARPLTELMQEA 526
I +V HV+NFDLPN I+DYVHRIGRTGR G +G A +FF++ + L + L +++ EA
Sbjct: 485 IENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQSLLKVLSEA 542
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 190/434 (43%), Positives = 272/434 (62%)
Query: 111 AEQP-VAEEENTGIN-FDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKP 168
+E P VA + I F ++ V+ G ++P + TF E + + ++ + KP
Sbjct: 93 SEHPDVAARSDRDIEQFRKENEMTVK--GHDIPHPITTFDEAGFPDYVLQEVKDQGFPKP 150
Query: 169 TPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALI 228
TP+Q P+++ GRD++ A TGSGKT ++C P I I + +Q G P+ L+
Sbjct: 151 TPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDG-----PIVLV 205
Query: 229 LAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL 288
LAPTREL+ QI E KF + ++ YGGAP Q+R+L RGV+I +ATPGRL+D+L
Sbjct: 206 LAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDML 265
Query: 289 ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQR 348
E + +L+ + YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+Q+
Sbjct: 266 EAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVQQ 321
Query: 349 LASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALT 407
L D+L + I + +G + +++ I Q VE + E KR L+ H + A ++ K
Sbjct: 322 LTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVK--HLESA--LNEKDNKI 377
Query: 408 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 467
LVF TK+ D + +L +G+PA IHGD+ Q ER+ L F+ GKT I+VATDVAARG
Sbjct: 378 LVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARG 437
Query: 468 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEAN 527
+D+ + HV+N+D+P +I+DYVHRIGRTGR G SG A +FF E N L L ++M+EAN
Sbjct: 438 IDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREAN 497
Query: 528 QEVPAWLNRYASRA 541
Q VP L R+ R+
Sbjct: 498 QTVPPELQRFDRRS 511
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 181/395 (45%), Positives = 255/395 (64%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G +VP V TF E + + ++ + KPT +Q P+++ GRD++ A+TGSGKT
Sbjct: 132 GRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKT 191
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
++C P I I + + G P+ LILAPTREL+ QI E KF + ++
Sbjct: 192 LSYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQAEISKFGKSSRIRNTC 246
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
YGG P Q+R+L RGV++ +ATPGRL+D+LE R +L+ + YL LDEADRMLDMGFEP
Sbjct: 247 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEP 306
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQR 375
QIRKI+ Q+ P RQT ++SAT+PKE+++LASDFL NYI + +G + S+ I Q
Sbjct: 307 QIRKIISQI-RPD---RQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQI 362
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE + E +KR ++ L + N G + L VF TK+ AD + +L +G+PA +IH
Sbjct: 363 VEVISEFEKRDRMIKHLEKIMEN--RGNKCL--VFTGTKRIADEITRFLRQDGWPALSIH 418
Query: 436 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 495
GD+ QQER+ L FK+GK+PI+VATDVA+RG+D+ + HV+N+D PN+ +DYVHRIGRT
Sbjct: 419 GDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRT 478
Query: 496 GRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
GRAG G A FF +N AR L ++ EA Q++
Sbjct: 479 GRAGAKGTAITFFTTDNAKQARDLVTILSEAKQQI 513
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 187/407 (45%), Positives = 263/407 (64%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
DI VE G +VP + F + + + + I + + +PTP+Q P+++ GRDL+ A
Sbjct: 152 DISVE--GRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIA 209
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
+TGSGKT A+ P + + + PR + P+ LILAPTREL+ QI E++KF +
Sbjct: 210 ETGSGKTLAYLLPALVHVSAQ-----PRLGQDDGPIVLILAPTRELAVQIQEESRKFGLR 264
Query: 250 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
+GV+ YGGAP Q+R+L RGV+I++ATPGRL+D+LE +L+ + YL LDEADRM
Sbjct: 265 SGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRM 324
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SS 368
LDMGFEPQIRKIV Q+ P RQT+L+SAT+P+E++ LA FL + +G +
Sbjct: 325 LDMGFEPQIRKIVSQI-RPD---RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKA 380
Query: 369 TDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNG 428
I Q +E V +K + L+ LL Q+ +G + L+FVETK+G D + L M+G
Sbjct: 381 NQSINQVIEIVPTPEKYNRLLTLLK-QLMDG-----SKILIFVETKRGCDQVTRQLRMDG 434
Query: 429 FPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 488
+PA IHGD+TQ ER+ L FKSG++PI+ ATDVAARGLD+ + VVN+D PN ++DY
Sbjct: 435 WPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDY 494
Query: 489 VHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLN 535
+HRIGRTGRAG G+A FF +N AR L +++QEA Q VP L+
Sbjct: 495 IHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLS 541
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 819 (293.4 bits), Expect = 3.7e-88, Sum P(3) = 3.7e-88
Identities = 174/375 (46%), Positives = 243/375 (64%)
Query: 168 PTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLAL 227
P+P+Q + PI++ RD++A A+TGSGKT + P G M ++QR + P L
Sbjct: 252 PSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP---GFM---HLQRIHNDSRMGPTIL 305
Query: 228 ILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL 287
+L+PTREL++QI VEA KF + + YGGAP QL+E+ERGVDI+VATPGRL D+
Sbjct: 306 VLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDI 365
Query: 288 LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQ 347
LE R+SL + YL LDEADRMLDMGFEPQIRKIV ++ P RQT++++AT+PKE++
Sbjct: 366 LEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV----PTKRQTLMYTATWPKEVR 421
Query: 348 RLASDFLANYIFLAVGRVGS--STDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA 405
++A+D L N + +G V + I Q +E + +K S L +L +Q G +
Sbjct: 422 KIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEP----GSKI 477
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 465
+ +F TK+ D L L F A IHGD++Q ER+ L F+SG+TP+LVATDVAA
Sbjct: 478 I--IFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAA 534
Query: 466 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQE 525
RGLD+ + VVN+D PN ++DYVHRIGRTGRAG +GLA FF + + A L ++++
Sbjct: 535 RGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEG 594
Query: 526 ANQEVPAWLNRYASR 540
ANQ+VP + A+R
Sbjct: 595 ANQKVPPQVREMATR 609
Score = 52 (23.4 bits), Expect = 3.7e-88, Sum P(3) = 3.7e-88
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 111 AEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPT 169
A P + ++ +AY + SG VPP + +F L L +R C P
Sbjct: 126 ARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNEL---LRECPNFMPY 182
Query: 170 PVQRHAIP---ISIGGRDLMACA 189
+ +P ++GG +++ CA
Sbjct: 183 ALS--FVPGAIFALGGANVVRCA 203
Score = 42 (19.8 bits), Expect = 3.7e-88, Sum P(3) = 3.7e-88
Identities = 13/46 (28%), Positives = 17/46 (36%)
Query: 26 PRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSRPD 71
P + Y P + PP + P SS T S + SG D
Sbjct: 37 PETNVTQYERP-ASSAPPKLAAIPVSSSVQTNQQSSSGFNSGKEDD 81
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 190/445 (42%), Positives = 270/445 (60%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G +VP V TF E + ++ + PT +Q P+++ GRD++ A+TGSGKT
Sbjct: 117 GSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT 176
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
+C P I I + + G P+ LILAPTREL+ QI E KF + ++
Sbjct: 177 LTYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQAEISKFGKSSRIRNTC 231
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
YGG P Q+R+L RGV++ +ATPGRL+D+LE + +L+ + YL LDEADRMLDMGFEP
Sbjct: 232 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEP 291
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQR 375
QIRKI+ Q+ P RQT+++SAT+PKE++ +A+DFL ++I + +G + S+ I Q
Sbjct: 292 QIRKIIGQI-RPD---RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQI 347
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE V ES+KR ++ + +V +G K + L+FV TK+ AD + +L +G+PA +IH
Sbjct: 348 VEVVSESEKRDRMIRHME-KVMDGKDSKNKI-LIFVGTKRVADEITRFLRQDGWPALSIH 405
Query: 436 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 495
GD+ Q ER+ L FK+GK+PI+VATDVA+RG+D+ ++ HV+N+D PN+ +DY+HRIGRT
Sbjct: 406 GDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT 465
Query: 496 GRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANYXXXXXXXXXXXX 555
GRAG G A FF N AR L ++QEA QE+ R A A Y
Sbjct: 466 GRAGAKGTAITFFTTENSKQARDLLGVLQEAKQEIDP---RLAEMARYGGGGGGGRYGGY 522
Query: 556 XXARDFRRDGSFTRGTSNDYYSGVN 580
R R G RG +ND G N
Sbjct: 523 R-GRGGRHHGGGGRG-ANDLPMGGN 545
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 178/407 (43%), Positives = 266/407 (65%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
SG ++P + TF E + + ++ + KPT +Q P+++ GRD++ A TGSGK
Sbjct: 104 SGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGK 163
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVV 255
T ++C P I I + + G P+ L+LAPTREL+ QI E KF + + ++
Sbjct: 164 TLSYCLPGIVHINAQPLLAPGDG-----PIVLVLAPTRELAVQIQTECSKFGHSSRIRNT 218
Query: 256 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 315
YGG P +QQ+R+L RG +I++ATPGRL+D+LE + +L+ + YL LDEADRMLDMGFE
Sbjct: 219 CVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFE 278
Query: 316 PQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQ 374
PQIRKIV Q+ P RQT+++SAT+PKE+++LA+D+L + I + VG + S++ I Q
Sbjct: 279 PQIRKIVDQI-RPD---RQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQ 334
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
VE V + +KR D L+ + + TL+F TK+ D + +L +G+PA I
Sbjct: 335 IVEVVSDFEKR----DRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAI 390
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HGD+ Q+ER+ L+ F++G++PI+VATDVAARG+D+ + +V+N+D+P +I+DYVHRIGR
Sbjct: 391 HGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGR 450
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRA 541
TGRAG +G A +FF E N L L +M+EANQ +P L +Y R+
Sbjct: 451 TGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYDRRS 497
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 192/487 (39%), Positives = 278/487 (57%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEA 155
D + + PF D E + + ++ + G NVP V TF E
Sbjct: 73 DWKNETLIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNY 132
Query: 156 LNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQR 215
+ +++ + PTP+Q+ A P+++ GRD++ + TGSGKT ++C P I I + +
Sbjct: 133 VLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSP 192
Query: 216 PRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVD 275
G P+ L+LAPTREL+ QI E KF + ++ YGG P Q+R+L RGV+
Sbjct: 193 GDG-----PIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVE 247
Query: 276 ILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQT 335
I +ATPGRL+D+L+ + +L+ + YL LDEADRMLDMGFEPQIRKIV Q+ P RQT
Sbjct: 248 ICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQT 303
Query: 336 MLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHA 394
++FSAT+PKE+QRLA D+L +YI + VG + +++ I Q VE V +DKR+ L
Sbjct: 304 VMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARL----GK 359
Query: 395 QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGK 454
+ + + L+F TK+ AD + +L +G+PA IHGD+ Q ER+ L F++GK
Sbjct: 360 DIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGK 419
Query: 455 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMS 514
+PI+VATDVA+RG+D+ + HV N+D P + +DYVHRIGRTGRAG G A +F +N
Sbjct: 420 SPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAK 479
Query: 515 LARPLTELMQEANQEVPAWLNRYASRANYXXXXXXXXXXXXXXARD-FRRDGSFTRGTSN 573
AR L ++ EA Q++ L A Y R FRR G + G N
Sbjct: 480 QARELVSILSEAKQDIDPKLEEMA---RYSSGGRGGNYRRGGYGRGGFRRGGGY--GNRN 534
Query: 574 DYYSGVN 580
++G N
Sbjct: 535 RGFTGSN 541
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 840 (300.8 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 173/367 (47%), Positives = 242/367 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 247
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 248 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 307
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 308 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 363
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 364 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 419
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 420 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 479
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
A+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +++
Sbjct: 480 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 539
Query: 524 QEANQEV 530
+EANQ +
Sbjct: 540 EEANQAI 546
Score = 40 (19.1 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 34 ASERESAAPAAAP 46
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 840 (300.8 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 173/367 (47%), Positives = 242/367 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 245
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 246 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 305
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 306 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 361
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 362 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 417
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 418 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 477
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
A+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +++
Sbjct: 478 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 537
Query: 524 QEANQEV 530
+EANQ +
Sbjct: 538 EEANQAI 544
Score = 40 (19.1 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 32 ASERESAAPAAAP 44
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 840 (300.8 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 173/367 (47%), Positives = 242/367 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 245
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 246 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 305
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 306 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 361
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 362 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 417
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 418 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 477
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
A+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +++
Sbjct: 478 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 537
Query: 524 QEANQEV 530
+EANQ +
Sbjct: 538 EEANQAI 544
Score = 40 (19.1 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 32 ASERESAAPAAAP 44
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 840 (300.8 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 173/367 (47%), Positives = 242/367 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 247
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 248 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 307
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 308 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 363
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 364 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 419
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 420 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 479
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
A+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +++
Sbjct: 480 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 539
Query: 524 QEANQEV 530
+EANQ +
Sbjct: 540 EEANQAI 546
Score = 40 (19.1 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 50 ASSRESTEPASGP 62
AS RES PA+ P
Sbjct: 34 ASERESAAPAAAP 46
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 180/432 (41%), Positives = 272/432 (62%)
Query: 102 VNPFGDDVGAEQP-VAEEENTGIN-FDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLN 159
+ PF + E P VA +T + + +I VE G+++P V +F ++ + +
Sbjct: 56 LTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVE--GKDIPKPVKSFRDVGFPDYVLEE 113
Query: 160 IRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS 219
+++ + +PTP+Q P+++ GRDL+ A+TGSGKT ++ P I + + + G
Sbjct: 114 VKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDG- 172
Query: 220 RTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 279
P+ L+LAPTREL+ QI EA KF + +K YGG P Q+R+L++GV+I++A
Sbjct: 173 ----PIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIA 228
Query: 280 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFS 339
TPGRL+D++E +L+ + YL LDEADRMLDMGF+PQIRKIV + P RQT+ +S
Sbjct: 229 TPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHI-RPD---RQTLYWS 284
Query: 340 ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQR-VEFVHESDKRSHLMDLLHAQVAN 398
AT+PKE+++L+ FL N + +G + +++ V+ + ES K + L+ LL + +
Sbjct: 285 ATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE-DIMD 343
Query: 399 GVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 458
G + LVF++TKKG D + L M+G+PA +IHGD++Q ER+ L F+SGK+PI+
Sbjct: 344 G-----SRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIM 398
Query: 459 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARP 518
ATDVAARGLD+ V +V+N+D P ++DYVHRIGRTGRAG G A FF N A+
Sbjct: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKE 458
Query: 519 LTELMQEANQEV 530
LT ++QEA Q+V
Sbjct: 459 LTNILQEAGQKV 470
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 186/410 (45%), Positives = 262/410 (63%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V G VP V F E L ++ + K+ KPT +Q + PI++ GRD+++ A+TG
Sbjct: 118 VTLEGRGVPRPVFEFNEAPLPGQIH-ELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTG 176
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT AF P + I ++ + QR G P L+L PTREL+ Q+ + F + G+
Sbjct: 177 SGKTLAFMLPALVHITKQAHRQRGEG-----PAVLVLLPTRELAQQVQEVSIDFCHSLGL 231
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K+ +GGA Q R+LERGVDI+VATPGRL+D L+ +++ YL LDEADRMLDM
Sbjct: 232 KMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDM 291
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQI+KI+ Q+ P RQT++FSAT+PKE++ LASDF + FL VG + ++
Sbjct: 292 GFEPQIKKIIGQI-RPD---RQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHN 347
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I Q V+ + E K++ LM+LL+ + N K+ T++FVETK+ AD L + +G+P
Sbjct: 348 ITQVVDILEEHAKQAKLMELLN-HIMNQ---KECKTIIFVETKRKADELTRAMRRDGWPT 403
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD+ Q ER+ L+ FK+GKTPI++ATDVAARGLD+ + V+N+D PN+ +DYVHR
Sbjct: 404 LCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHR 463
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRA 541
IGRTGR+ K G A FF N S A+ L +++ EA Q VP L A+R+
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMANRS 513
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 823 (294.8 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 167/286 (58%), Positives = 208/286 (72%)
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R ++ L +YL LDEADRMLDMGFEPQIR+IV+Q MPP G+R TM+FSATFPKEIQ L
Sbjct: 78 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML 137
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
A DFL YIFLAVGRVGS+++ I Q+V +V + DKRS L+D+L G G +LTLV
Sbjct: 138 ARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGSDSLTLV 191
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 469
FVETKKGAD+LE +LY G+ T+IHGDR+Q++RE AL F+SGK+PILVAT VAARGLD
Sbjct: 192 FVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLD 251
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQE 529
I +V HV+NFDLP+DI++YVHRIGRTGR G GLAT+FFNE NM++ + L +L+ EA QE
Sbjct: 252 ISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQE 311
Query: 530 VPAWLNRYASRANYXXXXXXXXXXXXXX----ARDFRRD-GSFTRG 570
VP+WL A +Y ARD+R+ GS + G
Sbjct: 312 VPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGSSSSG 357
Score = 51 (23.0 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 29 TRSTYVPPHLRNK 41
++ Y+PPHLRN+
Sbjct: 34 SKGRYIPPHLRNR 46
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 179/412 (43%), Positives = 257/412 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V G N P + F E + + I+R + +PT +Q P+++ G D++ AQTG
Sbjct: 70 VTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 129
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++S +
Sbjct: 130 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYSRACRL 184
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 185 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 244
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL Y+ + +G + S+
Sbjct: 245 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHN 300
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 301 ILQIVDVCHDVEKDDKLIRLMEEIMSE----KENKTIVFVETKRRCDDLTRKMRRDGWPA 356
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 357 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 416
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 417 IGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGS 468
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 179/412 (43%), Positives = 257/412 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V G N P + F E + + I+R + +PT +Q P+++ G D++ AQTG
Sbjct: 78 VTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 137
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++S +
Sbjct: 138 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYSRACRL 192
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 193 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 252
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL Y+ + +G + S+
Sbjct: 253 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHN 308
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 309 ILQIVDVCHDVEKDDKLIRLMEEIMSE----KENKTIVFVETKRRCDDLTRKMRRDGWPA 364
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 365 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 424
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 425 IGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGS 476
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 176/399 (44%), Positives = 254/399 (63%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G + P + F E + + + I + + PTP+Q P+++ G+D++ AQTG
Sbjct: 84 ITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTG 143
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++ G P+ L+LAPTREL+ Q+ A ++ + +
Sbjct: 144 SGKTLSYLLPAIVHINHQPFLEHGDG-----PICLVLAPTRELAQQVQQVAAEYGKASRI 198
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 199 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 258
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL YI + VG + S+
Sbjct: 259 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHN 314
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ ++ +K L+ LL ++ K+ T++FVETK+ D L + +G+PA
Sbjct: 315 ILQIVDVCNDGEKEDKLIRLLEEIMSE----KENKTIIFVETKRRCDDLTRRMRRDGWPA 370
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD+ QQER+ L FK GK PIL+ATDVA+RGLD+ V V+NFD PN+ +DY+HR
Sbjct: 371 MGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHR 430
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
IGRT R+ K+G A FF NNM A L +++EANQ +
Sbjct: 431 IGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAI 469
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 186/413 (45%), Positives = 261/413 (63%)
Query: 133 VETSGENVP-PAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
+ G+ VP P++ F E + + IR+ + KPT +Q PI++ GRDL+ AQT
Sbjct: 145 ITIKGDQVPTPSIE-FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQT 203
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG 251
GSGKT A+ P + I + ++R G P+AL+LAPTREL+ QI A +F T
Sbjct: 204 GSGKTLAYVLPAVVHINNQPRLERGDG-----PIALVLAPTRELAQQIQQVAIEFGSNTH 258
Query: 252 VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
V+ +GGAP QQ R+LERGV+I++ATPGRL+D LER SL+ YL LDEADRMLD
Sbjct: 259 VRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLD 318
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTD 370
MGFEPQIRKI+QQ+ P RQ +++SAT+PKE+++LA +FL NYI + +G + S+
Sbjct: 319 MGFEPQIRKIMQQI-RPD---RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANH 374
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
I+Q V+ E++K L+ LL A + T++FVETKK D + + G+
Sbjct: 375 NILQIVDVCDENEKLMKLIKLLTDISAEN----ETKTIIFVETKKRVDEITRNISRQGWR 430
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHGD++QQER+ L SF++G+ ILVATDVAARGLD+ V V+N+D P++ +DYVH
Sbjct: 431 ACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVH 490
Query: 491 RIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANY 543
RIGRTGR+ +G A F +N + A L ++++EANQ + L A Y
Sbjct: 491 RIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMAMNGGY 543
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 177/394 (44%), Positives = 251/394 (63%)
Query: 138 ENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTA 197
E P V F + + + + + +PTP+Q P+++ GRD++ AQTGSGKT
Sbjct: 83 EGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTL 142
Query: 198 AFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVA 257
A+ P I I + Y++R G P+ L+LAPTREL+ Q+ A + + +K
Sbjct: 143 AYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 197
Query: 258 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 317
YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDMGFEPQ
Sbjct: 198 YGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQ 257
Query: 318 IRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRV 376
IRKIV Q+ P RQT+++SAT+PKE+++LA DFL +Y+ + VG + S+ I+Q V
Sbjct: 258 IRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIV 313
Query: 377 EFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHG 436
+ ES+K L+ L+ +A K+ T++FVETK+ D L + +G+PA IHG
Sbjct: 314 DVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHG 369
Query: 437 DRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTG 496
D++Q ER+ L F+SGK PIL+ATDVA+RGLD+ V V+N+D PN +DYVHRIGRT
Sbjct: 370 DKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTA 429
Query: 497 RAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
R+ G A FF N+ AR L ++++EANQ +
Sbjct: 430 RSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 463
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 182/425 (42%), Positives = 259/425 (60%)
Query: 121 TGINFDAYE-DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
T D Y + G N P V F E + + I R + +PT +Q P++
Sbjct: 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQI 239
+ G D++ AQTGSGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQV 183
Query: 240 HVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIR 299
A ++ +K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+
Sbjct: 184 QQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTT 243
Query: 300 YLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIF 359
YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI
Sbjct: 244 YLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIH 299
Query: 360 LAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+ +G + S+ I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D
Sbjct: 300 INIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCD 355
Query: 419 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 478
L + +G+PA IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N
Sbjct: 356 ELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVIN 415
Query: 479 FDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRY 537
+D PN +DY+HRIGRT R+ K+G A FF NN+ L +++EANQ + P L
Sbjct: 416 YDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLV 475
Query: 538 ASRAN 542
R +
Sbjct: 476 EDRGS 480
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 182/425 (42%), Positives = 259/425 (60%)
Query: 121 TGINFDAYE-DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPIS 179
T D Y + G N P V F E + + I R + +PT +Q P++
Sbjct: 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 180 IGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQI 239
+ G D++ AQTGSGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQV 183
Query: 240 HVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIR 299
A ++ +K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+
Sbjct: 184 QQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTT 243
Query: 300 YLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIF 359
YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI
Sbjct: 244 YLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIH 299
Query: 360 LAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+ +G + S+ I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D
Sbjct: 300 INIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCD 355
Query: 419 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 478
L + +G+PA IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N
Sbjct: 356 ELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVIN 415
Query: 479 FDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRY 537
+D PN +DY+HRIGRT R+ K+G A FF NN+ L +++EANQ + P L
Sbjct: 416 YDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLV 475
Query: 538 ASRAN 542
R +
Sbjct: 476 EDRGS 480
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 187/448 (41%), Positives = 266/448 (59%)
Query: 107 DDVGAEQPVAEEENTGINFDAYEDIPVE-TSGEN---VPPAVNTFAEIDLGEALNLNIRR 162
+DV Q ++E G+ F+ + D V+ TS E + P TFAE +L E + N+
Sbjct: 304 EDVFNMQKISE----GLMFNKFFDAEVKLTSSEKTVGIKPC-KTFAEANLTETMQKNVAH 358
Query: 163 CKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV 222
Y K TP+Q++A+P+ G D+MACAQTGSGKTAAF PI++ ++ + + G
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTA-GEGGC 417
Query: 223 YPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
YP +IL PTREL+ QI+ E +KF+YQT +++ YGG + ++E+G I+V T G
Sbjct: 418 YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVG 477
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSAT 341
R+ E + L R+ LDEADRM+D MGF I IV MP RQT++FSAT
Sbjct: 478 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSAT 537
Query: 342 FPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGV 400
FP +Q A FL NY+ +A+ ++G++ ++Q E S+K+ L++LL + +
Sbjct: 538 FPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYT 597
Query: 401 HGKQA-----LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 455
K A T+VFV + AD L L PA TIHG R Q+ER ALR F++G
Sbjct: 598 TEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSK 657
Query: 456 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSL 515
P+L+AT VA RGLDI V HV+N+D+P++IDDY+HRIGRTGR G SG AT+F +E+ SL
Sbjct: 658 PVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISED-CSL 716
Query: 516 ARPLTELMQEANQEVPAWLNRYASRANY 543
L ++ +A Q VP W+ A+ NY
Sbjct: 717 LSELVGVLADAQQIVPDWMQG-AAGGNY 743
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 187/448 (41%), Positives = 266/448 (59%)
Query: 107 DDVGAEQPVAEEENTGINFDAYEDIPVE-TSGEN---VPPAVNTFAEIDLGEALNLNIRR 162
+DV Q ++E G+ F+ + D V+ TS E + P TFAE +L E + N+
Sbjct: 304 EDVFNMQKISE----GLMFNKFFDAEVKLTSSEKTVGIKPC-KTFAEANLTETMQKNVAH 358
Query: 163 CKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV 222
Y K TP+Q++A+P+ G D+MACAQTGSGKTAAF PI++ ++ + + G
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTA-GEGGC 417
Query: 223 YPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 282
YP +IL PTREL+ QI+ E +KF+YQT +++ YGG + ++E+G I+V T G
Sbjct: 418 YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVG 477
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSAT 341
R+ E + L R+ LDEADRM+D MGF I IV MP RQT++FSAT
Sbjct: 478 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSAT 537
Query: 342 FPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGV 400
FP +Q A FL NY+ +A+ ++G++ ++Q E S+K+ L++LL + +
Sbjct: 538 FPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYT 597
Query: 401 HGKQA-----LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 455
K A T+VFV + AD L L PA TIHG R Q+ER ALR F++G
Sbjct: 598 TEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSK 657
Query: 456 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSL 515
P+L+AT VA RGLDI V HV+N+D+P++IDDY+HRIGRTGR G SG AT+F +E+ SL
Sbjct: 658 PVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISED-CSL 716
Query: 516 ARPLTELMQEANQEVPAWLNRYASRANY 543
L ++ +A Q VP W+ A+ NY
Sbjct: 717 LSELVGVLADAQQIVPDWMQG-AAGGNY 743
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 179/412 (43%), Positives = 256/412 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 428
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 429 IGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 480
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 179/412 (43%), Positives = 256/412 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 139 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 198
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 199 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 253
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 254 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 313
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 314 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 369
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 370 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 425
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 426 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 485
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 486 IGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 537
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 179/412 (43%), Positives = 256/412 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 428
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 429 IGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 480
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 179/412 (43%), Positives = 256/412 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 428
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 429 IGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 480
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 179/412 (43%), Positives = 256/412 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 428
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 429 IGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 480
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 173/367 (47%), Positives = 242/367 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 398
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
A+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +++
Sbjct: 399 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 458
Query: 524 QEANQEV 530
+EANQ +
Sbjct: 459 EEANQAI 465
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 173/367 (47%), Positives = 242/367 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 398
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
A+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +++
Sbjct: 399 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 458
Query: 524 QEANQEV 530
+EANQ +
Sbjct: 459 EEANQAI 465
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 173/367 (47%), Positives = 242/367 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 398
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
A+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +++
Sbjct: 399 ASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVL 458
Query: 524 QEANQEV 530
+EANQ +
Sbjct: 459 EEANQAI 465
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 174/399 (43%), Positives = 251/399 (62%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G P V F + + + + + + +PT +Q P+++ GRD++ AQTG
Sbjct: 83 ITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTG 142
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT A+ P I I + Y++R G P+ L+LAPTREL+ Q+ A + + +
Sbjct: 143 SGKTLAYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVAFDYGKSSRI 197
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 198 KSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDM 257
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +Y+ + +G + S+
Sbjct: 258 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHN 313
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ E++K + L+ L+ +A K+ T++FVETKK D L + +G+PA
Sbjct: 314 ILQIVDVCMENEKDNKLIQLMEEIMAE----KENKTIIFVETKKRCDELTRRMRRDGWPA 369
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++Q ER+ L F+SGK PIL+ATDVA+RGLD+ V V+N+D PN +DYVHR
Sbjct: 370 MCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHR 429
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
IGRT R+ G A FF N+ AR L +++EA Q +
Sbjct: 430 IGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAI 468
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 179/412 (43%), Positives = 255/412 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+I +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 369 MGIHGDKSQQERGWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 428
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 429 IGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 480
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 181/410 (44%), Positives = 254/410 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG VPP + +F L + + PTP+Q + PI++ GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT + P G + ++QR R + P L+L+PTREL++QI EA KF + +
Sbjct: 206 SGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
YGGAP QLR+LERG DI+VATPGRL D+LE R+SL+ I YL LDEADRMLDM
Sbjct: 260 SCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDM 319
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS--STD 370
GFEPQIRKIV+++ P RQT++++AT+PK ++++A+D L N + +G V +
Sbjct: 320 GFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 375
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
I Q +E V +K+ L +L +Q G + + +F TK+ D L L F
Sbjct: 376 SITQHIEVVAPMEKQRRLEQILRSQEP----GSKVI--IFCSTKRMCDQLTRNLTRQ-FG 428
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHGD++Q ER+ L F+SG+TP+LVATDVAARGLD+ + VVN+D PN ++DYVH
Sbjct: 429 AAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
Query: 491 RIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
RIGRTGRAG +G A FF + + A L ++++ ANQ VP + A+R
Sbjct: 489 RIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATR 538
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 818 (293.0 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 172/400 (43%), Positives = 250/400 (62%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G VPP + F + L I + PTP+Q A PI++ GRD++ A+TGSGKT
Sbjct: 376 GREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKT 435
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
AF P I I + ++ G P+ L+LAPTREL+ QI E KF + +
Sbjct: 436 LAFLLPSIVHINAQPVLREDDG-----PIVLVLAPTRELALQIQEETNKFGGTSQISNTC 490
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
YGGA + Q+ L++GV+I++ATPGRL+D+LE + +L+ + YL LDEADRMLDMGFEP
Sbjct: 491 VYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEP 550
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQR- 375
QIRKI+ Q+ P RQT++FSAT+PKE+Q LA DFL ++I + +G + + V++
Sbjct: 551 QIRKIISQI-RPD---RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQI 606
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE + +K+ ++ L G G+ +VF ET+KG D L+ L +GF + IH
Sbjct: 607 VEVCQDFEKKERMLSFL------GSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIH 660
Query: 436 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 495
G+++Q ER+ L FK+G PI++ATDVA+RGLDI + +VVN+D PN I+ Y+HRIGRT
Sbjct: 661 GNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRT 720
Query: 496 GRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLN 535
RAG SG++ + +N LA L +++ EA Q++P L+
Sbjct: 721 ARAGASGVSYSLLTTDNARLANELIKVLTEAKQKIPIELS 760
Score = 37 (18.1 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 42 PPTSSEPPASSRESTE---PASGPRWGSGS 68
PPTS+ +SS +T P++ GS S
Sbjct: 206 PPTSTSTSSSSTTTTTTTTPSTSYNGGSTS 235
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 178/412 (43%), Positives = 255/412 (61%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G N P V F E + + I R + +PT +Q P+++ G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT ++ P I I + +++R G P+ L+LAPTREL+ Q+ A ++ +
Sbjct: 142 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYCRACRL 196
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
K YGGAP Q+R+LERGV+ +ATPGRL+D LE + +L+ YL LDEADRMLDM
Sbjct: 197 KSTCIYGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDM 256
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDL 371
GFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL +YI + +G + S+
Sbjct: 257 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I+Q V+ H+ +K L+ L+ ++ K+ T+VFVETK+ D L + +G+PA
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKRRCDELTRKMRRDGWPA 368
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD++QQER+ L FK GK PIL+ATDVA+RGLD+ V V+N+D PN +DY+HR
Sbjct: 369 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 428
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV-PAWLNRYASRAN 542
IGRT R+ K+G A FF NN+ L +++EANQ + P L R +
Sbjct: 429 IGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS 480
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 177/432 (40%), Positives = 258/432 (59%)
Query: 122 GINFDAYEDIPVETSGENVPPAVNT---FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
G+ F+ + D V+ + + P V T F+E +LGE + N+ Y K TP+Q++ +P+
Sbjct: 526 GLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQ 238
G D+MACAQTGSGKTAAF PI++ ++ E + G YP +IL PTREL+ Q
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTA-GEGGCYPRCIILTPTRELTDQ 644
Query: 239 IHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
I+ E +KF+YQT +++ YGG + ++E+G I+V T GR+ E + L
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704
Query: 299 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLAN- 356
R+ LDEADRM+D MGF I IV MP RQT++FSATFP +Q A + L
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEG 764
Query: 357 YIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLVFV 411
YI LA+ ++G++ ++Q E S+K+ L+++L + + K + T+VFV
Sbjct: 765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824
Query: 412 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 471
+ AD L L PA TIHG R Q+ER ALR F++G P+L+AT VA RGLDI
Sbjct: 825 SQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIK 884
Query: 472 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVP 531
V HV+N+D+P++IDDY+HRIGRTGR G +G AT+F +E+ +L L ++ +A+Q VP
Sbjct: 885 GVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISED-CNLLSELVRVLSDADQLVP 943
Query: 532 AWLNRYASRANY 543
W+ AS N+
Sbjct: 944 EWMQG-ASGGNF 954
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 177/432 (40%), Positives = 258/432 (59%)
Query: 122 GINFDAYEDIPVETSGENVPPAVNT---FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI 178
G+ F+ + D V+ + + P V T F+E +LGE + N+ Y K TP+Q++ +P+
Sbjct: 526 GLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
Query: 179 SIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQ 238
G D+MACAQTGSGKTAAF PI++ ++ E + G YP +IL PTREL+ Q
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTA-GEGGCYPRCIILTPTRELTDQ 644
Query: 239 IHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
I+ E +KF+YQT +++ YGG + ++E+G I+V T GR+ E + L
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704
Query: 299 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLAN- 356
R+ LDEADRM+D MGF I IV MP RQT++FSATFP +Q A + L
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEG 764
Query: 357 YIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLVFV 411
YI LA+ ++G++ ++Q E S+K+ L+++L + + K + T+VFV
Sbjct: 765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824
Query: 412 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 471
+ AD L L PA TIHG R Q+ER ALR F++G P+L+AT VA RGLDI
Sbjct: 825 SQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIK 884
Query: 472 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVP 531
V HV+N+D+P++IDDY+HRIGRTGR G +G AT+F +E+ +L L ++ +A+Q VP
Sbjct: 885 GVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISED-CNLLSELVRVLSDADQLVP 943
Query: 532 AWLNRYASRANY 543
W+ AS N+
Sbjct: 944 EWMQG-ASGGNF 954
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 181/416 (43%), Positives = 258/416 (62%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
E+ + G+ VP + F+E+ L + + IRR Y PT +Q PI++ G + +
Sbjct: 266 EEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGI 324
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT + P I I +Q +QR G P+AL+LAPTREL+ QI A +F
Sbjct: 325 AKTGSGKTLGYILPAIVHINNQQPLQRGDG-----PIALVLAPTRELAQQIQQVATEFGS 379
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
+ V+ +GGAP Q+R+L+RG +I++ATPGRL+D L +L+ YL LDEADR
Sbjct: 380 SSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADR 439
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-S 367
MLDMGFEPQIRKIV Q+ P RQT+++SAT+PKE+++LA DFL NYI + +G + S
Sbjct: 440 MLDMGFEPQIRKIVSQI-RPD---RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELS 495
Query: 368 STDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMN 427
+ I Q V+ E K L LL + + + + ++FVETK+ D L ++
Sbjct: 496 ANHNIRQVVDVCDEFSKEEKLKTLL-SDIYDTSESPGKI-IIFVETKRRVDNLVRFIRSF 553
Query: 428 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 487
G IHGD++Q ER+ LR F+SGK+ ILVATDVAARGLD+ + +V+NFD P + +D
Sbjct: 554 GVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSED 613
Query: 488 YVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANY 543
Y+HRIGRTGR+ G + AFF +NN A+ L ++++EANQE+ L A + Y
Sbjct: 614 YIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSRY 669
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 173/369 (46%), Positives = 242/369 (65%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ L+LAPTREL+ Q+ A + + +K YGGAP Q+R+LERGV+I +ATPGRL
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+PK
Sbjct: 227 IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPK 282
Query: 345 EIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
E+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A K
Sbjct: 283 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----K 338
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATDV
Sbjct: 339 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 398
Query: 464 AARGL--DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTE 521
A+RGL D+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L +
Sbjct: 399 ASRGLGFDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIK 458
Query: 522 LMQEANQEV 530
+++EANQ +
Sbjct: 459 VLEEANQAI 467
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 175/338 (51%), Positives = 229/338 (67%)
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
+R P+ LILAPTREL+ QI +AKKF ++TG+K VV YGG I QL L++G DI+V
Sbjct: 447 NRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIV 506
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG------- 331
ATPGRL D+LE+ ++ L + +L LDEADRMLDMGF PQIR IV DMP
Sbjct: 507 ATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSE 566
Query: 332 -------------MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEF 378
RQT++FSATF KEIQ LA ++L Y FL VG+VGS+ + I Q + F
Sbjct: 567 NKVEYKKYCNDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVF 626
Query: 379 VHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDR 438
V E +K ++L++LL A+ NG LT++FVETK+ AD +E +L A IHGD+
Sbjct: 627 VEEENKCNYLLNLL-AENNNG------LTILFVETKRKADIIERFLSNQKLNAVCIHGDK 679
Query: 439 TQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRA 498
+Q ERE AL+ FK G ILVATDVAARGLDI ++ HV+NFDLP++IDDY+HRIGRTGRA
Sbjct: 680 SQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRA 739
Query: 499 GKSGLATAFFNENNMSLARPLTELMQEANQEVPAW-LN 535
G G+AT+F NE+N ++ + L ++E NQ++P W LN
Sbjct: 740 GNIGIATSFVNEDNKNIFKDLLATLEECNQQIPRWFLN 777
Score = 499 (180.7 bits), Expect = 7.7e-47, P = 7.7e-47
Identities = 110/223 (49%), Positives = 144/223 (64%)
Query: 122 GINFDAYEDIPVETSG---ENVPPAVNTFAE--IDLGEALNLNIRRCKYVKPTPVQRHAI 176
G+NFD Y IPVE SG ENV A+ TF + ++L E L NI++ Y K TP+Q++++
Sbjct: 335 GVNFDLYNSIPVEISGFNSENVA-AIETFDDPSLNLNELLLSNIKKVNYDKTTPIQKYSL 393
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIM------REQYVQRPRGS-----RTVYPL 225
I + DL+ AQTGSGKTA + PII+ ++ Y Q + S R P+
Sbjct: 394 NIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPI 453
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
LILAPTREL+ QI +AKKF ++TG+K VV YGG I QL L++G DI+VATPGRL
Sbjct: 454 CLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLN 513
Query: 286 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP 328
D+LE+ ++ L + +L LDEADRMLDMGF PQIR IV DMP
Sbjct: 514 DILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 175/338 (51%), Positives = 229/338 (67%)
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
+R P+ LILAPTREL+ QI +AKKF ++TG+K VV YGG I QL L++G DI+V
Sbjct: 447 NRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIV 506
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG------- 331
ATPGRL D+LE+ ++ L + +L LDEADRMLDMGF PQIR IV DMP
Sbjct: 507 ATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSE 566
Query: 332 -------------MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEF 378
RQT++FSATF KEIQ LA ++L Y FL VG+VGS+ + I Q + F
Sbjct: 567 NKVEYKKYCNDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVF 626
Query: 379 VHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDR 438
V E +K ++L++LL A+ NG LT++FVETK+ AD +E +L A IHGD+
Sbjct: 627 VEEENKCNYLLNLL-AENNNG------LTILFVETKRKADIIERFLSNQKLNAVCIHGDK 679
Query: 439 TQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRA 498
+Q ERE AL+ FK G ILVATDVAARGLDI ++ HV+NFDLP++IDDY+HRIGRTGRA
Sbjct: 680 SQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRA 739
Query: 499 GKSGLATAFFNENNMSLARPLTELMQEANQEVPAW-LN 535
G G+AT+F NE+N ++ + L ++E NQ++P W LN
Sbjct: 740 GNIGIATSFVNEDNKNIFKDLLATLEECNQQIPRWFLN 777
Score = 499 (180.7 bits), Expect = 7.7e-47, P = 7.7e-47
Identities = 110/223 (49%), Positives = 144/223 (64%)
Query: 122 GINFDAYEDIPVETSG---ENVPPAVNTFAE--IDLGEALNLNIRRCKYVKPTPVQRHAI 176
G+NFD Y IPVE SG ENV A+ TF + ++L E L NI++ Y K TP+Q++++
Sbjct: 335 GVNFDLYNSIPVEISGFNSENVA-AIETFDDPSLNLNELLLSNIKKVNYDKTTPIQKYSL 393
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIM------REQYVQRPRGS-----RTVYPL 225
I + DL+ AQTGSGKTA + PII+ ++ Y Q + S R P+
Sbjct: 394 NIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPI 453
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
LILAPTREL+ QI +AKKF ++TG+K VV YGG I QL L++G DI+VATPGRL
Sbjct: 454 CLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLN 513
Query: 286 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP 328
D+LE+ ++ L + +L LDEADRMLDMGF PQIR IV DMP
Sbjct: 514 DILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 180/410 (43%), Positives = 250/410 (60%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V T+GEN+P TF L + + + PTP+Q PI++ RD++A A+TG
Sbjct: 423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTG 482
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT + P ++R G P LILAPTREL++QI EA +F + +
Sbjct: 483 SGKTLGYLIPAFI-LLRHCRNDSRNG-----PTVLILAPTRELATQIQDEALRFGRSSRI 536
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
YGGAP QL+ELERG DI+VATPGRL D+LE + Q + L LDEADRMLDM
Sbjct: 537 SCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDM 596
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG--SSTD 370
GFEPQIRKIV ++ PP RQT++++AT+PKE++++ASD L N + + +GRV ++
Sbjct: 597 GFEPQIRKIVNEI--PP--RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 652
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
I Q VE V + +K L +L +Q G + + +F TK+ D L + + F
Sbjct: 653 AITQYVEVVPQMEKERRLEQILRSQE----RGSKVI--IFCSTKRLCDHLARSVGRH-FG 705
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHGD+TQ ER+ L F+SGK+ +L+ATDVAARGLDI + V+N+D P ++DYVH
Sbjct: 706 AVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVH 765
Query: 491 RIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
RIGRTGRAG +G+A FF E + A L ++++ ANQ+VP + A R
Sbjct: 766 RIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMR 815
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 169/430 (39%), Positives = 252/430 (58%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVN---TFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
N G FD + D V+ P + +F++ D+ +++ N+ R Y + TP+Q++ +
Sbjct: 270 NAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTL 329
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELS 236
P+ G+D++ACAQTGSGKTAAF PI+S ++ E+ + YP +IL PTREL+
Sbjct: 330 PLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYG-AEGGCYPRCIILTPTRELA 388
Query: 237 SQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 296
QI+ E +KFSYQ+ +++ YGG + ++ +G I+V T GR+ E + L
Sbjct: 389 DQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLD 448
Query: 297 MIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLA 355
RYL LDEADRM+D MGF P+I +I+ +MP RQTM+FSATFP +Q A L
Sbjct: 449 KCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLR 508
Query: 356 -NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLV 409
+Y + + ++G++ ++Q E + K L+ LL + K + T+V
Sbjct: 509 EDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIV 568
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 469
FV +K AD L + PA TIHG R Q+ER AL+ F+SG P+L+AT V RGLD
Sbjct: 569 FVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLD 628
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQ 528
I V HV+N+D+PN+IDDY+HRIGRTGR G SG AT+F + +++ + L + +A Q
Sbjct: 629 IKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQ 688
Query: 529 EVPAWLNRYA 538
VP+W+ A
Sbjct: 689 VVPSWMKEAA 698
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 169/430 (39%), Positives = 252/430 (58%)
Query: 120 NTGINFDAYEDIPVETSGENVPPAVN---TFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
N G FD + D V+ P + +F++ D+ +++ N+ R Y + TP+Q++ +
Sbjct: 270 NAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTL 329
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELS 236
P+ G+D++ACAQTGSGKTAAF PI+S ++ E+ + YP +IL PTREL+
Sbjct: 330 PLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYG-AEGGCYPRCIILTPTRELA 388
Query: 237 SQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 296
QI+ E +KFSYQ+ +++ YGG + ++ +G I+V T GR+ E + L
Sbjct: 389 DQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLD 448
Query: 297 MIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLA 355
RYL LDEADRM+D MGF P+I +I+ +MP RQTM+FSATFP +Q A L
Sbjct: 449 KCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLR 508
Query: 356 -NYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA-----LTLV 409
+Y + + ++G++ ++Q E + K L+ LL + K + T+V
Sbjct: 509 EDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIV 568
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 469
FV +K AD L + PA TIHG R Q+ER AL+ F+SG P+L+AT V RGLD
Sbjct: 569 FVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLD 628
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLARPLTELMQEANQ 528
I V HV+N+D+PN+IDDY+HRIGRTGR G SG AT+F + +++ + L + +A Q
Sbjct: 629 IKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQ 688
Query: 529 EVPAWLNRYA 538
VP+W+ A
Sbjct: 689 VVPSWMKEAA 698
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 177/402 (44%), Positives = 251/402 (62%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GENVP V + +I + + +++ V PTP+Q PI++ G+D++ A+TGSGKT
Sbjct: 105 GENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKT 164
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
AF P I+ + ++ G P+ L+LAPTREL+ QI E KFS ++ ++
Sbjct: 165 LAFILPAFVHILAQPNLKYGDG-----PIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
AYGG P + Q+ L++GV IL+A PGRL+DLLE+ +L + YL LDEAD+MLDMGFE
Sbjct: 220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANY-IFLAVGRVG-SSTDLIVQ 374
QIRKIV Q+ P RQT+++SAT+PKE+Q LA D I + VG + ++ I Q
Sbjct: 280 QIRKIVDQI-RPD---RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQ 335
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+ + E +K +L LL + +VFVETKK AD + L ++G PA I
Sbjct: 336 EIYLLEEHEKIGNLKSLLQR-----IFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HGD+ Q+ER L FK+GK+PI++ATDVA+RGLDI +V +V+NFD PN I+DYVHRIGR
Sbjct: 391 HGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGR 450
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNR 536
TGRAG G + F + LA+ L ++++E+ Q VP L +
Sbjct: 451 TGRAGSHGASFTFLTADKYRLAKDLVKILRESEQPVPPQLEK 492
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 177/402 (44%), Positives = 251/402 (62%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GENVP V + +I + + +++ V PTP+Q PI++ G+D++ A+TGSGKT
Sbjct: 105 GENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKT 164
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
AF P I+ + ++ G P+ L+LAPTREL+ QI E KFS ++ ++
Sbjct: 165 LAFILPAFVHILAQPNLKYGDG-----PIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 316
AYGG P + Q+ L++GV IL+A PGRL+DLLE+ +L + YL LDEAD+MLDMGFE
Sbjct: 220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279
Query: 317 QIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANY-IFLAVGRVG-SSTDLIVQ 374
QIRKIV Q+ P RQT+++SAT+PKE+Q LA D I + VG + ++ I Q
Sbjct: 280 QIRKIVDQI-RPD---RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQ 335
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+ + E +K +L LL + +VFVETKK AD + L ++G PA I
Sbjct: 336 EIYLLEEHEKIGNLKSLLQR-----IFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HGD+ Q+ER L FK+GK+PI++ATDVA+RGLDI +V +V+NFD PN I+DYVHRIGR
Sbjct: 391 HGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGR 450
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNR 536
TGRAG G + F + LA+ L ++++E+ Q VP L +
Sbjct: 451 TGRAGSHGASFTFLTADKYRLAKDLVKILRESEQPVPPQLEK 492
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 174/405 (42%), Positives = 255/405 (62%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
++ + SG +P V +F E L + ++R + KPT +Q PI++ GRDL+ A
Sbjct: 222 ELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIA 281
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY- 248
QTGSGKT A+ P I I + + R G P+AL+LAPTREL+ QI + + +
Sbjct: 282 QTGSGKTLAYMLPAIVHIGNQPPIIRGEG-----PIALVLAPTRELAQQIQSVVRDYGHL 336
Query: 249 -QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEAD 307
+ ++ +GG+ Q R+L+RGV++++ATPGRL+D LE +LQ YL LDEAD
Sbjct: 337 CKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEAD 396
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG- 366
RMLDMGFEPQIRKI++Q+ P RQ +++SAT+PKE+Q LA DFL +YI + +G +
Sbjct: 397 RMLDMGFEPQIRKIIEQI-RPD---RQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNL 452
Query: 367 SSTDLIVQRVEFVHESDKRSHLMDLLH--AQVAN-GVHGKQALTLVFVETKKGADALEHW 423
S+ I Q VE E +K L+ LL+ + + N G +G + + VFVETK + +
Sbjct: 453 SANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKII--VFVETKIKVEDILQI 510
Query: 424 LYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPN 483
+ G+ AT+IHGD+TQ ER+ L+ F++GK+ IL+ATDVA+RGLD+ + +V+N+D PN
Sbjct: 511 IRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPN 570
Query: 484 DIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQ 528
++YVHRIGRTGR + G A FF +N AR L +++EA Q
Sbjct: 571 SSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAGQ 615
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 182/428 (42%), Positives = 263/428 (61%)
Query: 118 EENTGINFDAYEDIPVETSGENVPPAVN---TFAEI--DLGEALNLNIRRCKYVKPTPVQ 172
EEN I +Y P E GE PP N TF + + + L I + + KP+P+Q
Sbjct: 255 EENNKITV-SYVFEPKE--GETSPPIPNPVWTFEQCFAEYPDMLE-EITKMGFSKPSPIQ 310
Query: 173 RHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPT 232
A PI + G D++ AQTG+GKT AF P G++ +Y PRG+R + L+LAPT
Sbjct: 311 SQAWPILLQGHDMIGIAQTGTGKTLAFLLP---GMIHTEYQSTPRGTRGGANV-LVLAPT 366
Query: 233 RELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAR 292
REL+ QI +E KK+S++ G+K V YGG N Q+ +LERG +I++ TPGRL DL+
Sbjct: 367 RELALQIEMEVKKYSFR-GMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANV 425
Query: 293 VSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASD 352
+ + I YL LDEADRMLDMGFEPQIRK++ +D+ P RQT++ SAT+P ++RLA
Sbjct: 426 IDVSTITYLVLDEADRMLDMGFEPQIRKVM--LDIRPD--RQTIMTSATWPPGVRRLAQS 481
Query: 353 FLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVE 412
++ N I + VG + + V+++ + E D + + + V N + + ++F
Sbjct: 482 YMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDK--FNTITSFVKN-MSSTDKI-IIFCG 537
Query: 413 TKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPH 472
K AD L L ++GF IHG+R Q +RE A+ KSG ILVATDVA+RGLDI
Sbjct: 538 RKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIED 597
Query: 473 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPA 532
+ HV+N+D P++I++YVHR+GRTGRAG+ G + +FF + ++A+ L E++QEA QEVP
Sbjct: 598 ITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPD 657
Query: 533 WLNRYASR 540
L+ A R
Sbjct: 658 ELHNMARR 665
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 174/438 (39%), Positives = 260/438 (59%)
Query: 118 EENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
EE T ++ + ED + G +P + ++ E L L + R Y KP+P+Q AI
Sbjct: 285 EEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAI 344
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELS 236
P+ + RD++ A+TGSGKTAAF P+++ I R + + T P A+++APTREL+
Sbjct: 345 PLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEE--NETEGPYAVVMAPTRELA 402
Query: 237 SQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 296
QI E KF++ G +V GG I +Q ++ +G +I++ATPGRL+D LER L
Sbjct: 403 QQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLN 462
Query: 297 MIRYLALDEADRMLDMGFEPQIRKIVQQM---DMPPPG----------MRQTMLFSATFP 343
Y+ LDEADRM+DMGFEPQ+ ++ M ++ P R T +FSAT P
Sbjct: 463 QCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMP 522
Query: 344 KEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGK 403
++RLA +L N + + +G G +TDLI Q V + ES+K L LL G+
Sbjct: 523 PGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDEL------GE 576
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
+ +VFV TKK D++ L G+ TT+HG ++Q++RE++L F++ + +LVATDV
Sbjct: 577 KT-AIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDV 635
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM 523
RG+DIP VAHV+N+D+P I+ Y HRIGRTGRAGKSG+AT+F ++ + L +++
Sbjct: 636 VGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQML 695
Query: 524 QEANQEVPAWLNRY-ASR 540
++N VP L R+ ASR
Sbjct: 696 VQSNSAVPPELARHEASR 713
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 177/438 (40%), Positives = 256/438 (58%)
Query: 105 FGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCK 164
F +++ + + E+E T D + + + SG +V V TF + + I++
Sbjct: 192 FYEELESISGMTEQETT----DYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQA 247
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
Y KPT +Q A+PI + GRD++ A+TGSGKTAAF P+I IM + +QR G P
Sbjct: 248 YEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----P 302
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
+ +I APTREL+ QI +EAKKFS G++V YGG ++Q +EL+ G +I+VATPGRL
Sbjct: 303 IGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRL 362
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+D+L+ +++ YL LDEADRM D+GFEPQ+R IV Q+ P RQT+LFSAT P
Sbjct: 363 IDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQI-RPD---RQTLLFSATMPW 418
Query: 345 EIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV-HESDKRSHLMDLLHAQVANGVHGK 403
++++LA + L++ I + VG VG + + I Q V + +++K L++ L + G
Sbjct: 419 KVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGD--- 475
Query: 404 QALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 463
LVF K D +E L +N F +HGD+ Q R L+ FKSG +L+ATDV
Sbjct: 476 ---VLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV 532
Query: 464 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KSGLATAFFNENNMSLARPLTEL 522
AARGLDI + VVN+D+ D+D +VHRIGRTGRAG + G+A + A L
Sbjct: 533 AARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNS 592
Query: 523 MQEANQEVPAWLNRYASR 540
+ A Q VP L A +
Sbjct: 593 LVAAGQNVPPELTDLAMK 610
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 167/402 (41%), Positives = 240/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GE +PP + +F E+ A+ +++ +PTP+Q IP + GRD++ A TGSGKT
Sbjct: 169 GEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKT 228
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VEAKKFSYQTG--- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E Q
Sbjct: 229 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGIIEYYCRLLQEDSLP 286
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ ++ GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 287 PLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 346
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L I + VGR G+++
Sbjct: 347 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASL 402
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
+VQ VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 403 DVVQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 454
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 455 AVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 514
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 515 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 556
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 171/437 (39%), Positives = 255/437 (58%)
Query: 115 VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVK-PTPVQR 173
++EEE + ++ + GE P + +F E+ + + LN K +K PTP+Q
Sbjct: 151 MSEEEREAVR----HELRILVEGETPSPPIRSFREMKFPKGI-LNGLAAKGIKNPTPIQV 205
Query: 174 HAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTR 233
+P + GRDL+ A TGSGKT F P+I + ++Y P R P LI+ P+R
Sbjct: 206 QGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEY-SLPF-ERNEGPYGLIICPSR 263
Query: 234 ELSSQIHVEAKKFSYQT---G---VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL 287
EL+ Q H + +S G ++ +A GG P+++ L + RGV I+VATPGRL+D+
Sbjct: 264 ELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDM 323
Query: 288 LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQ 347
L++ ++L M RYL +DEADRM+DMGFE +R I G RQT+LFSAT PK+IQ
Sbjct: 324 LDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQ 379
Query: 348 RLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALT 407
A L + + VGR G+++ + Q+VE+V + K +L+D L + A V
Sbjct: 380 NFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQ-KTAPPV------- 431
Query: 408 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 467
L+F E K+ D + +L + G A IHG + Q+ER A+ +++ GK +LVATDVA++G
Sbjct: 432 LIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKG 491
Query: 468 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENN-MSLARPLTELMQEA 526
LD P+V HV+N+D+P+DI++YVHRIGRTGR+ GLAT N+ S+ L L+ E
Sbjct: 492 LDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEG 551
Query: 527 NQEVPAWLNRYASRANY 543
QEVP +L+ A +
Sbjct: 552 KQEVPDFLDELAPETEH 568
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 164/402 (40%), Positives = 241/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ L A+ +++ + PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 167/408 (40%), Positives = 246/408 (60%)
Query: 125 FDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRD 184
F+ +++ + +G ++ V +F + L I + PTP+Q+ AIPI++ GRD
Sbjct: 285 FEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRD 344
Query: 185 LMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAK 244
L+A A+TGSGKTA F +P IS IM + Y+++ G P+AL LAPTREL+ QI++E
Sbjct: 345 LIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDG-----PIALFLAPTRELAHQIYLETL 399
Query: 245 KFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALD 304
K+S +K V YGG QQ +EL+ G +I+VATPGRL+D+++ L + YL LD
Sbjct: 400 KYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLD 459
Query: 305 EADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGR 364
EAD+M D GF PQ+ IV + P RQT+LFSATF ++ A L++ I +++G
Sbjct: 460 EADKMFDFGFGPQVLSIVNHV-RPD---RQTLLFSATFKPNVEEFARTILSDPIKISIGM 515
Query: 365 VGSSTDLIVQRVEFVH-ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHW 423
+GS+ I Q V+ + +SDK + L + L ++ G L+FV TK + L
Sbjct: 516 IGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGS------VLIFVSTKVAVEQLSSN 569
Query: 424 LYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPN 483
L GF T+HGD+ Q ER +++FK GK IL+ATDVAARGLDIP + +VVN+D
Sbjct: 570 LTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDTSR 629
Query: 484 DIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVP 531
DI+ + HRIGRTGRAG +G+A ++ + L + ++ A+Q VP
Sbjct: 630 DIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQFVP 677
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 187/461 (40%), Positives = 270/461 (58%)
Query: 108 DVGAEQPVAE--------EENTGINFDAYEDIPVETSGE-NVPPAVNTFAEIDLGEALNL 158
D+G E P E E GI+F +I V G V PA+ F + L A+
Sbjct: 77 DLGPEYPELEKQLFGERGESCAGIDFKVIREIAVVQEGPVRVEPALR-FEDAGLHPAMLK 135
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM-REQYVQRPR 217
N+ C Y PTP+Q + IP G D++ AQTGSGKTAAF P+I+ +M + + + PR
Sbjct: 136 NVDLCGYKVPTPIQAYCIPAIHKGHDVIGIAQTGSGKTAAFLIPVINKLMGKAKKLAAPR 195
Query: 218 GSRTVY-----------PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
+ Y PL +I+ PTREL+ Q EA+K Y++ ++ V YGG Q
Sbjct: 196 PNPVEYNMDIHGPVRAEPLVVIVCPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQ 255
Query: 267 LRELERGVDILVATPGRLVDLLERARV-SLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
+R++ G DIL ATPGRL+ +++ + +LQ +RY+ +DEAD ML +E ++KI
Sbjct: 256 IRQIGLGCDILCATPGRLLHFMDKPELLNLQRVRYVVIDEADEMLTADWEEDMKKI---- 311
Query: 326 DMPPPGMRQT---MLFSATFPKEIQRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHE 381
M G Q +LFSATFPK+I+ LA + L+ +++ L VGR GS+ I+Q V
Sbjct: 312 -MSAGGAAQEIKYLLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAP 370
Query: 382 SDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMN-GFPATTIHGDRTQ 440
+K+ L DL+ N + ++ T++FV K AD L+ +LY P T++H DRTQ
Sbjct: 371 MNKKRALNDLI-----NSMPPQR--TIIFVNNKWTADELDDYLYNECKLPCTSMHADRTQ 423
Query: 441 QERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPN-D---IDDYVHRIGRTG 496
+ERE ALR+F++G PILV T V ARG+D+ +VAHVVN+DLP+ D I++Y HRIGRTG
Sbjct: 424 REREDALRAFRAGTAPILVTTGVTARGIDVRNVAHVVNYDLPSMDHGGIEEYTHRIGRTG 483
Query: 497 RAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRY 537
R G GLAT+F+ + + ++A L M E NQE+P +L+ Y
Sbjct: 484 RIGNKGLATSFYTDRDEAIASVLVRTMLETNQEIPEFLSGY 524
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 163/402 (40%), Positives = 240/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ + PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 164/402 (40%), Positives = 240/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ L A+ +++ + PTP+Q IP + GRD++ A TGSGKT
Sbjct: 172 GDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 231
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 232 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 289
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
+ + GG + +Q+ + GV I+VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 290 LLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 349
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 350 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 405
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F + K DA+ +L + G
Sbjct: 406 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAKKKADVDAIHEYLLLKGVE 457
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 458 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 517
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 518 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 559
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 729 (261.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 173/452 (38%), Positives = 252/452 (55%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM----P---- 328
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 581
Query: 329 ---PPGM-----------RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQ 374
P M RQT++F+AT P ++RLA +L + +G G + + Q
Sbjct: 582 AEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQ 641
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+V + ES+KR L+ +L G ++FV KKG D L L G+ A T+
Sbjct: 642 KVFLMSESEKRKKLLAILE-------QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTL 694
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HG + Q++RE AL + K+G ILVATDVA RG+DI V+ VVN+D+ +I+DY+HRIGR
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGR 754
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEA 526
TGRAGKSG+A F + + ++ L + + E+
Sbjct: 755 TGRAGKSGVAITFLTKEDSAVFYELKQAILES 786
Score = 42 (19.8 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 219 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 252
Score = 37 (18.1 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEE 119
D R+ E + GD QP++ EE
Sbjct: 123 DSRKDEEDEHGDKKPKAQPLSLEE 146
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 729 (261.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 173/452 (38%), Positives = 252/452 (55%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM----P---- 328
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 581
Query: 329 ---PPGM-----------RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQ 374
P M RQT++F+AT P ++RLA +L + +G G + + Q
Sbjct: 582 AEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQ 641
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+V + ES+KR L+ +L G ++FV KKG D L L G+ A T+
Sbjct: 642 KVFLMSESEKRKKLLAILE-------QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTL 694
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HG + Q++RE AL + K+G ILVATDVA RG+DI V+ VVN+D+ +I+DY+HRIGR
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGR 754
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEA 526
TGRAGKSG+A F + + ++ L + + E+
Sbjct: 755 TGRAGKSGVAITFLTKEDSAVFYELKQAILES 786
Score = 42 (19.8 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 219 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 252
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 729 (261.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 173/452 (38%), Positives = 252/452 (55%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM----P---- 328
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 581
Query: 329 ---PPGM-----------RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQ 374
P M RQT++F+AT P ++RLA +L + +G G + + Q
Sbjct: 582 AEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQ 641
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+V + ES+KR L+ +L G ++FV KKG D L L G+ A T+
Sbjct: 642 KVFLMSESEKRKKLLAILE-------QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTL 694
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HG + Q++RE AL + K+G ILVATDVA RG+DI V+ VVN+D+ +I+DY+HRIGR
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGR 754
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEA 526
TGRAGKSG+A F + + ++ L + + E+
Sbjct: 755 TGRAGKSGVAITFLTKEDSAVFYELKQAILES 786
Score = 42 (19.8 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 219 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 252
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 729 (261.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 173/452 (38%), Positives = 252/452 (55%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 343 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 401
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 402 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 461
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 462 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 520
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM----P---- 328
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P
Sbjct: 521 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE 580
Query: 329 ---PPGM-----------RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQ 374
P M RQT++F+AT P ++RLA +L + +G G + + Q
Sbjct: 581 AEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQ 640
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+V + ES+KR L+ +L G ++FV KKG D L L G+ A T+
Sbjct: 641 KVFLMSESEKRKKLLAILE-------QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTL 693
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HG + Q++RE AL + K+G ILVATDVA RG+DI V+ VVN+D+ +I+DY+HRIGR
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGR 753
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEA 526
TGRAGKSG+A F + + ++ L + + E+
Sbjct: 754 TGRAGKSGVAITFLTKEDSAVFYELKQAILES 785
Score = 42 (19.8 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 218 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 251
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/402 (40%), Positives = 239/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/402 (40%), Positives = 239/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/402 (40%), Positives = 239/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 200 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 259
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 260 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 317
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 318 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 377
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 378 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 433
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 434 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 485
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 486 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 545
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 546 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 587
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/402 (40%), Positives = 239/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 191 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 250
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 251 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 308
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 309 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 368
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 369 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 424
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 425 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 476
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 477 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 536
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 537 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 578
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/402 (40%), Positives = 239/402 (59%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+ +PP + +F E+ A+ +++ PTP+Q IP + GRD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH--VE--AKKFSYQTG- 251
F P+I + EQ + P R P LI+ P+REL+ Q H +E + +
Sbjct: 233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
++ + GG + +Q+ + GV ++VATPGRL+DLL++ VSL + RYLALDEADRM+
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTD 370
DMGFE IR I G RQT+LFSAT PK+IQ A L + + VGR G+++
Sbjct: 351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406
Query: 371 LIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFP 430
++Q VE+V E K +L++ L L+F E K DA+ +L + G
Sbjct: 407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
A IHG + Q+ER A+ +F+ GK +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct: 459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518
Query: 491 RIGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
RIGRTGR+G +G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 172/436 (39%), Positives = 240/436 (55%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEA 155
D E + +PF + E + + ++ SG P +FA E
Sbjct: 208 DHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQ 267
Query: 156 LNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQR 215
L IR+ +Y +PTP+Q +PI++ GRD + A+TGSGKTAAF +PI+ IM ++ ++
Sbjct: 268 LMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEP 327
Query: 216 PRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVD 275
G P+A+I+ PTREL QIH E K+F G++ V YGG + +Q + L+ G +
Sbjct: 328 GEG-----PIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAE 382
Query: 276 ILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQT 335
I+V TPGRL+D +++ SLQ + +L DEADRM DMGFE Q+R I + P RQT
Sbjct: 383 IVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHV-RPD---RQT 438
Query: 336 MLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHES-DKRSHLMDLLHA 394
+LFSATF K+I++LA D L + I + G +G + + I Q VE + DK L L
Sbjct: 439 LLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQIVEVLQSGQDKWGWLTRRLVE 498
Query: 395 QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGK 454
+ G LVFV K + L L G+ +HGD Q ER + FK
Sbjct: 499 FTSAGS------VLVFVTKKANCEELATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKN 552
Query: 455 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMS 514
P+LVATDVAARGLDIP + VVN+D+ DID + HRIGRTGRAG+ G+A + S
Sbjct: 553 LPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTTKDTS 612
Query: 515 LARPLTELMQEANQEV 530
A L ++ ANQ V
Sbjct: 613 FAGDLVRNLEGANQSV 628
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 753 (270.1 bits), Expect = 5.4e-74, P = 5.4e-74
Identities = 169/421 (40%), Positives = 252/421 (59%)
Query: 115 VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLG-EALNLNIRRCKYVKPTPVQR 173
++EEE + + + I V G +VP V +++ LG + L++ I + + T +Q
Sbjct: 514 MSEEEAANLRLEL-DGIKVR--GLDVPKPVQKWSQCGLGIQTLDV-IDKLGFASLTSIQA 569
Query: 174 HAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTR 233
AIP + GRD++ A+TGSGKT AF P+ I ++ ++ G P+ LI+ PTR
Sbjct: 570 QAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEG-----PIGLIMTPTR 624
Query: 234 ELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERA 291
EL++QIH + K F ++ V AYGGAPI Q+ EL+RG +I+V TPGR++DLL
Sbjct: 625 ELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAG 684
Query: 292 RVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLA 350
RV+ L+ + Y+ LDEADRM DMGFEPQ+ KI+ + P RQT+LFSATFP+ ++ LA
Sbjct: 685 RVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNV-RPD---RQTVLFSATFPRNMEALA 740
Query: 351 SDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
L I + VG I Q VE +E K L++LL + + + A +L+F
Sbjct: 741 RKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELL-GNLYSTDENEDARSLIF 799
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
V+ ++ AD L L G+P +IHG + Q +R+ + FK+G P+L+AT VAARGLD+
Sbjct: 800 VDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDV 859
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
+ VVN+D PN ++DYVHR GRTGRAG +G A F E+ + + + ++++ QEV
Sbjct: 860 KQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQEV 919
Query: 531 P 531
P
Sbjct: 920 P 920
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 725 (260.3 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 162/431 (37%), Positives = 243/431 (56%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + T G +VP + ++ E L + L + R Y +PTP+QR AIPI++ RDL+
Sbjct: 330 EDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGV 389
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A TGSGKTAAF P++ I + + P A++LAPTREL+ QI +EAKKF+
Sbjct: 390 AVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTE 449
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G VV GG +Q L G +I++ATPGRLVD +ER + L Y+ +DEADR
Sbjct: 450 PLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADR 509
Query: 309 MLDMGFEPQIRKIVQQM----DMPPP-------GM----------RQTMLFSATFPKEIQ 347
M+D+GFE + KI+ + + P M RQTM+++AT P ++
Sbjct: 510 MIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRYRQTMMYTATMPTAVE 569
Query: 348 RLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALT 407
R+A +L + +G G + D + QRVE + DKR + ++ + + +
Sbjct: 570 RIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRL----GEILSSGDFRPPI- 624
Query: 408 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 467
+VFV K+ DA+ + GF + T+HG +TQ++RE AL S ++G T +LVATD+A RG
Sbjct: 625 IVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRG 684
Query: 468 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTE-LMQEA 526
+D+P V+ V+NF++ I+ Y HRIGRTGRAGKSG+A F + + L + L++
Sbjct: 685 IDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLIKSP 744
Query: 527 NQEVPAWLNRY 537
VP L ++
Sbjct: 745 ISRVPEELRKH 755
Score = 39 (18.8 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 26 PRPTRSTYVPPHLRNKPPTSSEPPASSRE----STEPASGP 62
P P + PP + PP EP ++ + PA+ P
Sbjct: 30 PPPPDVSAPPPPPEDLPPPPPEPEVKKKKVGWGTKRPATTP 70
Score = 38 (18.4 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 42 PPTSSEPPASSRESTEPASGP 62
P +S PP ES P P
Sbjct: 13 PEDASAPPPPPEESAAPPPPP 33
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 162/405 (40%), Positives = 235/405 (58%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H K + L L ++G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLK 518
Query: 426 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485
G +HGD Q ER + FK P+LVATDVAARGLDIP + V+N+D+ DI
Sbjct: 519 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 578
Query: 486 DDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
D + HRIGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 579 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 623
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 159/414 (38%), Positives = 251/414 (60%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVK-PTPVQRHAIPISIGGRDLMA 187
+ + + T GE++PP + TF E+ + + + +++ K +K P+P+Q +P+ + GRD++
Sbjct: 206 DQLNIITDGEDIPPPITTFKEMKIPKPV-IDVLLEKGIKKPSPIQVQGLPVILSGRDMIG 264
Query: 188 CAQTGSGKTAAFCFPIISGIMREQYVQRP--RGSRTVYPLALILAPTRELSSQIHVEAKK 245
A TGSGKT F P++ + E+ + P +G P LIL P+REL+ Q +
Sbjct: 265 IAYTGSGKTLVFTLPMVLFALEEE-CKLPIIQGEG---PFGLILCPSRELARQTYDLVNS 320
Query: 246 FS---YQTG----VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 298
F+ ++ G ++ ++A GG + +Q ++GV +++ATPGRL+DLL + +++ ++
Sbjct: 321 FTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLC 380
Query: 299 RYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYI 358
+YL LDEADR++D+GFE IR ++ RQT+LFSAT PK+IQ A L +
Sbjct: 381 KYLGLDEADRLIDLGFEDDIRSVLDNFT----NQRQTLLFSATMPKKIQEFARSALVLPV 436
Query: 359 FLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+ VGR G++ + Q VEFV K +L++ L L+F E KK D
Sbjct: 437 EVNVGRAGAANLNVTQEVEFVKPEAKIVYLLECLQKTPPP--------VLIFCENKKDVD 488
Query: 419 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 478
+ +L + A +IHGD++Q ERE A+++F+ GK +LVATDVA++GLD P + HV+N
Sbjct: 489 DIYEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVIN 548
Query: 479 FDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNM-SLARPLTELMQEANQEVP 531
FD+P +I++Y+HRIGRTGR G G+AT F N+NN SL L L+ EA Q+VP
Sbjct: 549 FDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTESLLLDLKYLLIEAKQKVP 602
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 167/403 (41%), Positives = 238/403 (59%)
Query: 140 VPPAVNTFAEIDLG-EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 198
+P V TF E + NI R + KPTP+Q A P+ + G DL+ AQTG+GKT A
Sbjct: 272 IPNPVCTFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLA 331
Query: 199 FCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAY 258
+ P G + PR R P L+L PTREL+ QI E K+SY+ G K + Y
Sbjct: 332 YLLP---GFIHMDGQPMPRDKRNG-PGMLVLTPTRELALQIEAECNKYSYK-GFKSICIY 386
Query: 259 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 318
GG N Q++ + GVDI++ATPGRL DL ++L+ I YL LDEADRMLDMGFEPQI
Sbjct: 387 GGGDRNAQIKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQI 446
Query: 319 RKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVE 377
KI+ +D+ P RQT++ SAT+P ++RLA +L + + + VG + ++ + + Q V
Sbjct: 447 MKII--LDIRPD--RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVL 502
Query: 378 FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGD 437
FV E +K+ ++ D +H L+FV K AD L L + G ++HGD
Sbjct: 503 FVQEDEKKDYVFDFIHRMEPLDK------VLIFVGKKLKADDLSSDLCLQGIAVQSLHGD 556
Query: 438 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 497
R Q +RE AL+ FK G+ ILVATD+A+RGLD+ + HV N+D P ++++YVHR+GRTGR
Sbjct: 557 REQCDREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGR 616
Query: 498 AGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
AG+SG + + +A L +++ + Q+VP L A R
Sbjct: 617 AGRSGESVTLVTREDWRVAAELITILERSGQDVPEELVLMAER 659
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 744 (267.0 bits), Expect = 5.0e-73, P = 5.0e-73
Identities = 165/441 (37%), Positives = 259/441 (58%)
Query: 96 DRREREVNPFGDDVGAE-QPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLG 153
D + E PF + E + ++ +N Y +++ ++ G++VP + + + L
Sbjct: 480 DHSKIEYEPFRKNFYIEVKDISRMTQEEVN--TYRKELELKVHGKDVPRPIKFWHQTGLT 537
Query: 154 EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYV 213
+ +++ Y KP P+Q A+PI + GRD + A+TGSGKT F P++ I + V
Sbjct: 538 SKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPV 597
Query: 214 QRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERG 273
+ G P+ L++APTREL QIH + +KFS G++ V YGG+ + QQ+ EL+RG
Sbjct: 598 EAGDG-----PIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRG 652
Query: 274 VDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
+I+V TPGR++D+L +++ L+ + +L +DEADRM DMGFEPQI +I+Q + P
Sbjct: 653 TEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNI-RPE- 710
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMD 390
RQT+LFSATFP++++ LA L + + VG I Q VE ESD+ L++
Sbjct: 711 --RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLE 768
Query: 391 LLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
LL G ++ LVFV++++ DAL + + +P ++HG + Q +RE + F
Sbjct: 769 LL------GEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDF 822
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+ +L+AT VAARGLD+ + VVNFD PN +DYVHR+GRTGRAG+ G A F +E
Sbjct: 823 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 882
Query: 511 NNMSLARPLTELMQEANQEVP 531
++ A L + ++ + Q VP
Sbjct: 883 DDAKYAPDLVKALELSEQPVP 903
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 716 (257.1 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 159/374 (42%), Positives = 231/374 (61%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
+I++ + KPTP+Q A PI + G DL+ AQTG+GKT ++ P G + RG
Sbjct: 238 SIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMP---GFIHLNSQPVSRG 294
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
R P L+L PTREL+ Q+ E K+SY+ G+K V YGG Q++++ +GVDI++
Sbjct: 295 KRNG-PGMLVLTPTRELALQVGAECSKYSYK-GLKSVCIYGGGNRKGQIQDIMKGVDIII 352
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V+L+ I YL LDEAD+MLD+GFE QI KI+ +D+ P RQT++
Sbjct: 353 ATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKIL--LDVRPD--RQTIMT 408
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P I++LA +L + + VG + + D + Q + E +KRS + L +
Sbjct: 409 SATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQS--- 465
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI 457
+ K + +VFV K AD L L + G P ++HGDR Q +RE AL FK+GK I
Sbjct: 466 --LSPKDKV-IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKI 522
Query: 458 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLAR 517
L+ATD+A+RGLD+ V HV N++ P +I++YVHR+GRTGRAGK G + +++ +A
Sbjct: 523 LIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVAG 582
Query: 518 PLTELMQEANQEVP 531
L E++Q ANQ +P
Sbjct: 583 ELIEILQRANQSIP 596
Score = 40 (19.1 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 36 PHLRNKPPTSSEPPASSRESTEPASGPRWGSGS 68
P + P S +P AS G W S S
Sbjct: 5 PERKRAEPNSRDPRASQHGRDGRGRGRGWSSTS 37
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 167/445 (37%), Positives = 253/445 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + T+ + +
Sbjct: 321 DHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISM 380
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ +++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 381 KILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALE 440
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 441 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 495
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 496 EIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 552
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q V + E +K L++L
Sbjct: 553 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLEL 611
Query: 392 LHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFK 451
L G + ++ ++FV+ ++ AD L L +P ++HG Q +R+ + FK
Sbjct: 612 L------GHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFK 665
Query: 452 SGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEN 511
+G +LVAT VAARGLD+ + VVN+ PN +DYVHR GRTGRAG G A F E+
Sbjct: 666 NGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITED 725
Query: 512 NMSLARPLTELMQEANQEVPAWLNR 536
A + + ++ + +PA L +
Sbjct: 726 QARYAGDIIKALELSGNPIPADLEK 750
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 159/405 (39%), Positives = 234/405 (57%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485
G +HGD Q ER + FK P+LVATDVAARGLDIP + V+N+D+ DI
Sbjct: 520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579
Query: 486 DDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
D + HRIGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 159/405 (39%), Positives = 234/405 (57%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485
G +HGD Q ER + FK P+LVATDVAARGLDIP + V+N+D+ DI
Sbjct: 520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579
Query: 486 DDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
D + HRIGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 159/405 (39%), Positives = 234/405 (57%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAEGKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485
G +HGD Q ER + FK P+LVATDVAARGLDIP + V+N+D+ DI
Sbjct: 520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579
Query: 486 DDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
D + HRIGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 181/451 (40%), Positives = 260/451 (57%)
Query: 98 REREVNPFGDD-VGAEQPVAEEENTGI---NFDAY---EDIPVETSGENVPPAVNTFAEI 150
+E E P V +E V E T + + D Y +I VE S + + +F +
Sbjct: 60 KESEKKPEPTSAVASEFYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYL 119
Query: 151 DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE 210
L ++ I K+ KPTP+Q A P + G+D++ A+TGSGKT AF P IS +M +
Sbjct: 120 SLDSSIQAEIS--KFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMND 177
Query: 211 QYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLREL 270
Q + RG + L+++PTREL+SQI+ + + G++ YGG P ++Q +L
Sbjct: 178 Q---KKRGIQV-----LVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQL 229
Query: 271 ERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
++ ++VATPGRL+DLL+ V L + YL LDEADRML+ GFE I+ I+++ D
Sbjct: 230 KKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDA--- 285
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST--DLIVQRVEFVHESDKRSHL 388
RQT++F+AT+PKE++ LAS F+ N I +++G T I Q VE V K L
Sbjct: 286 SKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKL 345
Query: 389 MDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALR 448
++LL + +G K L+F KK A +E L NG+ IHGD +QQ+R AL
Sbjct: 346 LELLK-KYHSGPK-KNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALN 403
Query: 449 SFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF 508
FKSGK+ +L+ATDVAARGLDIP+V V+N P ++DYVHRIGRTGRAG++G A F
Sbjct: 404 EFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLF 463
Query: 509 NENNMSLARPLTELMQEANQEVPAWLNRYAS 539
E LA L ++ ANQ VP L ++ +
Sbjct: 464 TEQEKHLAGGLVNVLNGANQPVPEDLIKFGT 494
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 159/405 (39%), Positives = 234/405 (57%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L + L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519
Query: 426 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485
G +HGD Q ER + FK P+LVATDVAARGLDIP + V+N+D+ DI
Sbjct: 520 QEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579
Query: 486 DDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
D + HRIGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 735 (263.8 bits), Expect = 9.8e-73, P = 9.8e-73
Identities = 169/446 (37%), Positives = 254/446 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
L H Q + V ++FV+ ++ AD L L +P ++HG Q +R+ + F
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+G +LVAT VAARGLD+ H+ VVN+ PN +DYVHR GRTGRAG G A F E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 511 NNMSLARPLTELMQEANQEVPAWLNR 536
+ A + + ++ + VP L +
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEK 751
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 735 (263.8 bits), Expect = 1.0e-72, P = 1.0e-72
Identities = 169/446 (37%), Positives = 254/446 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
L H Q + V ++FV+ ++ AD L L +P ++HG Q +R+ + F
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+G +LVAT VAARGLD+ H+ VVN+ PN +DYVHR GRTGRAG G A F E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 511 NNMSLARPLTELMQEANQEVPAWLNR 536
+ A + + ++ + VP L +
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEK 751
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 735 (263.8 bits), Expect = 1.0e-72, P = 1.0e-72
Identities = 169/446 (37%), Positives = 254/446 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
L H Q + V ++FV+ ++ AD L L +P ++HG Q +R+ + F
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+G +LVAT VAARGLD+ H+ VVN+ PN +DYVHR GRTGRAG G A F E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 511 NNMSLARPLTELMQEANQEVPAWLNR 536
+ A + + ++ + VP L +
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEK 751
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 735 (263.8 bits), Expect = 1.0e-72, P = 1.0e-72
Identities = 169/446 (37%), Positives = 254/446 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
L H Q + V ++FV+ ++ AD L L +P ++HG Q +R+ + F
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+G +LVAT VAARGLD+ H+ VVN+ PN +DYVHR GRTGRAG G A F E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 511 NNMSLARPLTELMQEANQEVPAWLNR 536
+ A + + ++ + VP L +
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEK 751
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 735 (263.8 bits), Expect = 1.0e-72, P = 1.0e-72
Identities = 169/446 (37%), Positives = 254/446 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
L H Q + V ++FV+ ++ AD L L +P ++HG Q +R+ + F
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+G +LVAT VAARGLD+ H+ VVN+ PN +DYVHR GRTGRAG G A F E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 511 NNMSLARPLTELMQEANQEVPAWLNR 536
+ A + + ++ + VP L +
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEK 751
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 735 (263.8 bits), Expect = 1.0e-72, P = 1.0e-72
Identities = 169/446 (37%), Positives = 254/446 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
L H Q + V ++FV+ ++ AD L L +P ++HG Q +R+ + F
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+G +LVAT VAARGLD+ H+ VVN+ PN +DYVHR GRTGRAG G A F E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 511 NNMSLARPLTELMQEANQEVPAWLNR 536
+ A + + ++ + VP L +
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEK 751
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 159/405 (39%), Positives = 233/405 (57%)
Query: 126 DAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDL 185
D + + SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD+
Sbjct: 234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293
Query: 186 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKK 245
+ A+TGSGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+
Sbjct: 294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348
Query: 246 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
F ++ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRM DMGFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +
Sbjct: 409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G + + + Q VE +H + + + + + G L+FV K A+ L L
Sbjct: 465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELASNLK 519
Query: 426 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485
G +HGD Q ER + FK P+LVATDVAARGLDIP + V+N+D+ DI
Sbjct: 520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579
Query: 486 DDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
D + HRIGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 158/395 (40%), Positives = 231/395 (58%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TGSGK
Sbjct: 244 SGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGK 303
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVV 255
TAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F ++ V
Sbjct: 304 TAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKRFGKAYNLRSV 358
Query: 256 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 315
YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DMGFE
Sbjct: 359 AVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFE 418
Query: 316 PQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQR 375
Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + + Q
Sbjct: 419 YQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 376 VEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIH 435
VE +H + + + + + G L+FV K A+ L + L G +H
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLKQEGHNLGLLH 529
Query: 436 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 495
GD Q ER + FK P+LVATDVAARGLDIP + V+N+D+ DID + HRIGRT
Sbjct: 530 GDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRT 589
Query: 496 GRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
GRAG+ G+A + + A L ++ ANQ V
Sbjct: 590 GRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 155/403 (38%), Positives = 241/403 (59%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
+G+++PP + F ++ + ++ V+PTP+Q +P+ + GRD++ A TGSGK
Sbjct: 137 NGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGK 196
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFS---YQTG- 251
T F P+I ++E+ + P+ LI+ P+REL+ Q + ++F + G
Sbjct: 197 TLVFVLPMIMIALQEEMMMPIAAGEG--PIGLIVCPSRELARQTYEVVEQFVAPLVEAGY 254
Query: 252 --VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
++ ++ GG + QL ++RGV I+VATPGRL D+L + ++SL RYL LDEADR+
Sbjct: 255 PPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRL 314
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
+D+GFE IR++ RQT+LFSAT P +IQ A L + + VGR G++
Sbjct: 315 VDLGFEDDIREVFDHFK----SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAAN 370
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
++Q VE+V + K +L++ L + + V L+F E K D + +L + G
Sbjct: 371 LDVIQEVEYVKQEAKIVYLLECLQ-KTSPPV-------LIFCENKADVDDIHEYLLLKGV 422
Query: 430 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 489
A IHG + Q++RE A+ SFK+GK +LVATDVA++GLD P + HV+N+D+P +I++YV
Sbjct: 423 EAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYV 482
Query: 490 HRIGRTGRAGKSGLATAFFNENNMSLAR-PLTELMQEANQEVP 531
HRIGRTGR GK+G+AT F N+N L L+QEA Q +P
Sbjct: 483 HRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIP 525
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 152/321 (47%), Positives = 212/321 (66%)
Query: 224 PLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 283
P+ L+LAPTREL+ Q+ A ++ +K YGGAP Q+R+LERGV+I +ATPGR
Sbjct: 89 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 148
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
L+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+P
Sbjct: 149 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWP 204
Query: 344 KEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
KE+++LA DFL +YI + +G + S+ I+Q V+ H+ +K L+ L+ ++
Sbjct: 205 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE---- 260
Query: 403 KQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATD 462
K+ T+VFVETK+ D L + +G+PA IHGD++QQER+ L FK GK PIL+ATD
Sbjct: 261 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 320
Query: 463 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTEL 522
VA+RGLD+ V V+N+D PN +DY+HRIGRT R+ K+G A FF NN+ L +
Sbjct: 321 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 380
Query: 523 MQEANQEV-PAWLNRYASRAN 542
++EANQ + P L R +
Sbjct: 381 LREANQAINPKLLQLVEDRGS 401
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 732 (262.7 bits), Expect = 2.3e-72, P = 2.3e-72
Identities = 169/446 (37%), Positives = 254/446 (56%)
Query: 96 DRREREVNPFGDDVGAEQP-VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGE 154
D + E PF + E P +A+ +N E + G+ P + ++ + +
Sbjct: 322 DHGKIEYEPFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISM 381
Query: 155 ALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ 214
+ ++++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ IM ++ ++
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 215 RPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGV 274
G P+A+I+ PTREL+ QI E KKFS G++VV YGG I++Q+ EL+RG
Sbjct: 442 EGEG-----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 275 DILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 331
+I+V TPGR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV + P
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD-- 553
Query: 332 MRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDL 391
RQT++FSATFP+ ++ LA L+ I + VG + Q+V + E K L++L
Sbjct: 554 -RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLEL 612
Query: 392 L-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSF 450
L H Q + V ++FV+ ++ AD L L +P ++HG Q +R+ + F
Sbjct: 613 LGHYQESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDF 665
Query: 451 KSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE 510
K+G +LVAT VAARGLD+ H+ VVN+ PN +DYVHR GRTGRAG G A F E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 511 NNMSLARPLTELMQEANQEVPAWLNR 536
+ A + + ++ + VP L +
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEK 751
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 160/383 (41%), Positives = 234/383 (61%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
NI + + KPTP+Q A PI + G DL+ AQTG+GKT ++ P I + +QR R
Sbjct: 255 NIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRARN 314
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
P L+L PTREL+ Q+ E ++SY+ G+K V YGG + Q+++L +G DI++
Sbjct: 315 G----PGMLVLTPTRELALQVDAECSEYSYR-GLKSVCIYGGGDRDGQIKDLSKGADIII 369
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V L+ I YL LDEAD+MLDMGFEPQI KI+ +D+ P RQT++
Sbjct: 370 ATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKIL--LDVRPD--RQTVMT 425
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P ++RLA +L + + VG + + + Q + E +KRSH+ +
Sbjct: 426 SATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFI----- 480
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI 457
+ + K + ++FV K AD L L + ++HG+R Q +RE AL+SFK+GK I
Sbjct: 481 DSMSPKDKV-IIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRI 539
Query: 458 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLAR 517
L+ATD+A+RGLD+ V HV N+D P +I++YVHR+GRTGRAG++G++ N+ +A
Sbjct: 540 LIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRNDWKIAG 599
Query: 518 PLTELMQEANQEVPAWLNRYASR 540
L +++ ANQ VP L A R
Sbjct: 600 ELINILERANQSVPEDLVSMAER 622
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 162/383 (42%), Positives = 232/383 (60%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
NI++ + KPTP+Q A PI + G DL+ AQTG+GKT + P G + +G
Sbjct: 256 NIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMP---GFIHLVLQPSLKG 312
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
R P L+L PTREL+ Q+ E K+SY+ G++ V YGG ++Q+ EL++GVDI++
Sbjct: 313 QRN-RPGMLVLTPTRELALQVEGECCKYSYK-GLRSVCVYGGGNRDEQIEELKKGVDIII 370
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V+L+ I YL LDEAD+MLDMGFEPQI KI+ +D+ P RQT++
Sbjct: 371 ATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKIL--LDVRPD--RQTVMT 426
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P + RLA +L + + VG + + + Q + E +K SH+ L + +
Sbjct: 427 SATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSS 486
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI 457
+VFV K AD L L + ++HGDR Q++RE AL +FK+GK I
Sbjct: 487 TDK------VIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRI 540
Query: 458 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLAR 517
L+ATD+A+RGLD+ V HV NFD P +I++YVHRIGRTGRAG++G++ N+ +A
Sbjct: 541 LIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVAS 600
Query: 518 PLTELMQEANQEVPAWLNRYASR 540
L +++ ANQ +P L A R
Sbjct: 601 ELINILERANQSIPEELVSMAER 623
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 173/452 (38%), Positives = 253/452 (55%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + + E L +
Sbjct: 331 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHI 389
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 390 LEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 449
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 450 EDSDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI 508
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM----P---- 328
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ + + P
Sbjct: 509 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDD 568
Query: 329 ---PPGM-----------RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQ 374
P M RQT++F+AT P ++RLA +L + +G G + + Q
Sbjct: 569 AEDPEKMMQNFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQ 628
Query: 375 RVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTI 434
+V + E +KR L+++L A+G + ++FV KKG D L L G+ A T+
Sbjct: 629 KVILMSEGEKRKKLLEVL----ASGF---EPPIIIFVNQKKGCDVLAKSLEKMGYNACTL 681
Query: 435 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 494
HG + Q++RE AL + K+G ILVATDVA RG+DI V+ V+N+D+ +I+DY+HRIGR
Sbjct: 682 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGR 741
Query: 495 TGRAGKSGLATAFFNENNMSLARPLTELMQEA 526
TGRAGKSG+A F + + S+ L + + E+
Sbjct: 742 TGRAGKSGVAMTFLTKEDSSVFYDLKQAILES 773
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 158/414 (38%), Positives = 246/414 (59%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCK-YVKPTPVQRHAIPISIGGRDLMACAQT 191
+ G+++PP + +F E+ ++L +++ K V PT +Q IP+++ GRD++ A T
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAST 236
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH---VEAKKFSY 248
GSGKT F P++ + EQ ++ P R+ P LI+ P+REL+ QI +E
Sbjct: 237 GSGKTMTFVLPLVMFCL-EQEMKLPF-MRSEGPFGLIIVPSRELARQIFDLIIEMFDALG 294
Query: 249 QTGV---KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 305
+ G+ + + GG PI +Q +++ G+ I+VATPGRL D+L + ++L++ RYL LDE
Sbjct: 295 KAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDE 354
Query: 306 ADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRV 365
ADRMLDMGFE +I+ I RQT+LFSAT P++IQ A L I + VGR
Sbjct: 355 ADRMLDMGFEDEIKSIFYFFK----AQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRA 410
Query: 366 GSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY 425
G+++ ++Q +EFV +K +++ L L+F E K D + +L
Sbjct: 411 GAASLNVLQELEFVRSENKLVRVLECLQKTSPK--------VLIFAEKKVDVDNIYEYLL 462
Query: 426 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 485
+ G +IHG + Q +R + +F+ + +LVATDVA++GLD + HV+NFD+P DI
Sbjct: 463 VKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDI 522
Query: 486 DDYVHRIGRTGRAGKSGLATAFFNENN-MSLARPLTELMQEANQEVPAWLNRYA 538
++YVHRIGRTGR+G+ GLAT F N+ + MS+ L +L+ EA QE+P +L A
Sbjct: 523 ENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLA 576
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 163/402 (40%), Positives = 235/402 (58%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
++ SG++VP V ++ L + I + +Y KPT +Q A+P+ + GRD++ A+TG
Sbjct: 366 IKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTG 425
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT AF P+ I ++ V+ G P+ LIL PTREL+ QI + K F G+
Sbjct: 426 SGKTMAFLLPMFRHIKDQEPVKDNEG-----PIGLILTPTRELAVQIFRDCKPFLKTLGL 480
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEADRM 309
+ V AYGG PI Q+ +L+RG +I+VAT GR++DLL + RV SL+ Y+ LDEADRM
Sbjct: 481 RAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRM 540
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
DMGFEPQ+ KI + P RQT+LFSAT PK + L L N + + VG
Sbjct: 541 FDMGFEPQVMKIFANV-RPD---RQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVA 596
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
I Q VE E K + L++LL + +L+FVE ++ AD L L G+
Sbjct: 597 SEITQIVEIRDEKSKFNRLLELLGELYKDD---DDVRSLIFVERQEKADELLRELLRKGY 653
Query: 430 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 489
++HG + Q +R+ + FKSG P+++AT VAARGLD+ + VVN+D PN ++DYV
Sbjct: 654 GCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYV 713
Query: 490 HRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVP 531
HR GRTGRAG +G A F E + A + + ++++ Q VP
Sbjct: 714 HRAGRTGRAGNTGTAVTFVTEEQENCAIGIAKALEQSGQPVP 755
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 162/412 (39%), Positives = 243/412 (58%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
V+ +G + P V +F E L +R+ +Y +PTP+Q A+P ++ GRD++ A+TG
Sbjct: 257 VKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTG 316
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ +M ++ ++ G P+ LILAPTRELS QI+ EAKKF +
Sbjct: 317 SGKTAAFIWPMLMHVMDQKQLKPGDG-----PIGLILAPTRELSLQIYNEAKKFGKVYNL 371
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
VV YGG +Q + LE+G +I+VATPGR++D+++ +L+ + +L LDEADRM M
Sbjct: 372 NVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHM 431
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFEPQ+R I + P RQ ++FSATF K I+RLA D L++ + + G + + I
Sbjct: 432 GFEPQVRSICNHV-RPD---RQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDI 487
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q V F + K + L+ L ++ G L+FV K A+ + + L + +
Sbjct: 488 TQSVYVFPNPLQKWNWLLCHLVKFLSEGS------VLIFVTKKVDAETVSNNLLIKEYNC 541
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
+HGD Q +R + FK + ILVATDVAARGLDIPH+ +VVN+D DI+ + HR
Sbjct: 542 LLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHR 601
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANY 543
IGRTGRAG+ G A + + A L ++ A+Q VP L A ++++
Sbjct: 602 IGRTGRAGEKGNAYTLVTDKDKEFAGHLVRNLEGADQLVPDDLMELAMKSSW 653
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 178/450 (39%), Positives = 257/450 (57%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSG--ENVPPAVNTFAEIDLG 153
+ +E E N D + E E+ G + + V G E A+ TFAE +L
Sbjct: 68 EEKESEKNKKKD---VPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLP 124
Query: 154 EALNLNIRRCK-YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQY 212
E N+ + CK + KP+P+Q H P + GRDL+ A+TGSGKT AF P I ++++
Sbjct: 125 E--NV-LDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNK 181
Query: 213 VQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELER 272
+ GS+ V P L+L+PTREL+ QI ++ G+K + YGG+ Q+ +
Sbjct: 182 -KIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRS 240
Query: 273 GVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGM 332
GVDI++ TPGRL DL+E + L + ++ LDEADRMLDMGFE +R I+ + +
Sbjct: 241 GVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNK----V 296
Query: 333 RQTMLFSATFPKEIQRLASDFL-ANYIFLAVGRVGSSTDL-IVQRVEFVHESDKRSHLMD 390
RQ ++FSAT+P ++ +LA +F+ N I + +G V + + ++Q +E + E + L+
Sbjct: 297 RQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIA 356
Query: 391 LLHAQVANGVHGKQA-LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRS 449
LL H Q LVF K A+ LE +L G+ A +IHG++ Q ER +L
Sbjct: 357 LLEKY-----HKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSL 411
Query: 450 FKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN 509
FK G P+LVATDVAARGLDIP V V+N+ P +DYVHRIGRTGRAGK G+A FF
Sbjct: 412 FKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
Query: 510 ENNMSLARPLTELMQEANQEVPAWLNRYAS 539
N LA L +++EA Q VPA L ++ +
Sbjct: 472 PLNKGLAGELVNVLREAGQVVPADLLKFGT 501
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 163/367 (44%), Positives = 227/367 (61%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
Y +PTP+Q+ AIP + GRDLMA AQTG+GKTA F P++ ++ Q +G R V
Sbjct: 21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ--PHAKGRRPVR- 77
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
ALIL PTREL++QI + +S ++ +V +GG IN Q+ +L GVD+LVATPGRL
Sbjct: 78 -ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRL 136
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
+DL + V L + L LDEADRMLDMGF IR+++ ++ P RQ +LFSATF
Sbjct: 137 LDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL----PAKRQNLLFSATFSD 192
Query: 345 EIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQ 404
+I+ LA L N + + V R +++D + Q V FV + KR +LL + G + +Q
Sbjct: 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR----ELLSHMIGKG-NWQQ 247
Query: 405 ALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVA 464
L VF TK GA+ L L +G + IHG+++Q R AL FKSG +LVATD+A
Sbjct: 248 VL--VFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIA 305
Query: 465 ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQ 524
ARGLDI + HVVN++LPN +DYVHRIGRTGRA +G A + + L R + +L++
Sbjct: 306 ARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLK 365
Query: 525 EANQEVP 531
+ E+P
Sbjct: 366 K---EIP 369
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 152/406 (37%), Positives = 240/406 (59%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ +GE++PP + F ++ L ++ + PTP+Q +P+ + GRD++ A TG
Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFS---YQ 249
SGKT F P+I ++E+ + P + P+AL++ P+REL+ Q + ++F +
Sbjct: 145 SGKTLVFVLPMIILALQEE-IMMPIAAGEG-PIALVICPSRELAKQTYDVVEQFVASLVE 202
Query: 250 TG---VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEA 306
G ++ ++ GG + QL +++GV I+VATPGRL D+L + ++SL R L LDEA
Sbjct: 203 DGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262
Query: 307 DRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG 366
DR++D+GFE IR + RQT+LFSAT P +IQ A+ L + + VGR G
Sbjct: 263 DRLVDLGFEDDIRHVFDHFK----SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAG 318
Query: 367 SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYM 426
++ ++Q VE+V + K +L++ L L+F E K D + +L +
Sbjct: 319 AANLDVIQEVEYVKQEAKIVYLLECLQKTTPP--------VLIFCENKADVDDIHEYLLL 370
Query: 427 NGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDID 486
G A IHG + Q++R+ A+ FK+GK +LVATDVA++GLD P + HV+N+D+P +I+
Sbjct: 371 KGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIE 430
Query: 487 DYVHRIGRTGRAGKSGLATAFFNENNMSLAR-PLTELMQEANQEVP 531
+YVHRIGRTGR GK+G+AT F N+N + L L+QEA Q +P
Sbjct: 431 NYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIP 476
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 159/368 (43%), Positives = 229/368 (62%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ +PTP+Q P+++ GRD++ AQTGSGKT A+ P I I + Y++R G P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----P 166
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN-QQLRELERGVDILVATPGR 283
+ +L L S ++ F ++ V + G + Q+L L + V+I +ATPGR
Sbjct: 167 IVSVLPFFSTLFS-VYRGGTDFKFKCSSLFWVCFLGQSLKGQRLEWLSQCVEICIATPGR 225
Query: 284 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFP 343
+D LE + +L+ YL LDEADRMLDMGFEPQIRKIV Q+ P RQT+++SAT+P
Sbjct: 226 -IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWP 280
Query: 344 KEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHG 402
KE+++LA DFL +Y + VG + S+ I+Q V+ ES+K L+ L+ +A
Sbjct: 281 KEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE---- 336
Query: 403 KQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATD 462
K+ T++FVETK+ D L + +G+PA IHGD++Q ER+ L F+SGK PIL+ATD
Sbjct: 337 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD 396
Query: 463 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTEL 522
VA+RGLD+ V V+N+D PN +DYVHRIGRT R+ G A FF N+ AR L ++
Sbjct: 397 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV 456
Query: 523 MQEANQEV 530
++EANQ +
Sbjct: 457 LEEANQAI 464
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 156/384 (40%), Positives = 235/384 (61%)
Query: 158 LNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR 217
+NI++ + KPTP+Q A PI + G DL+ AQTG+GKT ++ P + + V +
Sbjct: 254 INIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDSQPVVFSLQ 313
Query: 218 GSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDIL 277
+R P L+L PTREL+ Q+ E K+SY+ G+K V YGG + Q+++L +GVDI+
Sbjct: 314 RARNG-PGMLVLTPTRELALQVEAECSKYSYK-GLKSVCVYGGGDRDGQIKDLLKGVDII 371
Query: 278 VATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTML 337
+ATPGRL DL V L+ I YL LDEAD+MLDMGFEPQI KI+ +D+ P RQT++
Sbjct: 372 IATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKIL--LDIRPD--RQTVM 427
Query: 338 FSATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQV 396
SAT+P ++RLA +L + + VG + + + Q + E +KRSH+ + +
Sbjct: 428 TSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIESM- 486
Query: 397 ANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTP 456
+ ++FV K AD L L + ++HG+R Q +RE AL++FK+GK
Sbjct: 487 -----SPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVR 541
Query: 457 ILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLA 516
IL+ATD+A+RGLD+ V HV N+D P +I++YVHR+GRTGRAG++G++ ++ +A
Sbjct: 542 ILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRSDWKIA 601
Query: 517 RPLTELMQEANQEVPAWLNRYASR 540
L +++ ANQ +P L A R
Sbjct: 602 GELIHILERANQSIPEDLVEMAER 625
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 167/388 (43%), Positives = 230/388 (59%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F + L L IR YV+PTPVQR AIP+ + RD+M AQTG+GKTA F P++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 206 GIMREQYVQRPRGSRTVYPL--ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ +V RP R+ P+ ALIL PTREL+ Q+ + + +K V +GG I
Sbjct: 71 RL----FVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSI 126
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+ L RGVDILVATPGRL+DL+ + ++L + + LDEADRMLDMGF P IR+I++
Sbjct: 127 KPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P RQ +LFSATF KEI+ L L + + V R ++ I VH D
Sbjct: 187 LL----PESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH---VVHPVD 239
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R +LL + + + +Q L VF TK GA+ L L +G + IHG+++Q R
Sbjct: 240 -RQRKRELLSFMIGSK-NWRQVL--VFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAAR 295
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
AL FK GK +LVATDVAARGLDI + HV+NF+LP+ DYVHR+GRTGRA G+
Sbjct: 296 MRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGV 355
Query: 504 ATAFFNENNMSLARPLTELMQ-EANQEV 530
A + + + + L R + +L+Q + QEV
Sbjct: 356 AISLVSGDEVRLLRDIEKLLQSKMPQEV 383
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 167/388 (43%), Positives = 230/388 (59%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F + L L IR YV+PTPVQR AIP+ + RD+M AQTG+GKTA F P++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 206 GIMREQYVQRPRGSRTVYPL--ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ +V RP R+ P+ ALIL PTREL+ Q+ + + +K V +GG I
Sbjct: 71 RL----FVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSI 126
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+ L RGVDILVATPGRL+DL+ + ++L + + LDEADRMLDMGF P IR+I++
Sbjct: 127 KPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P RQ +LFSATF KEI+ L L + + V R ++ I VH D
Sbjct: 187 LL----PESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH---VVHPVD 239
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R +LL + + + +Q L VF TK GA+ L L +G + IHG+++Q R
Sbjct: 240 -RQRKRELLSFMIGSK-NWRQVL--VFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAAR 295
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
AL FK GK +LVATDVAARGLDI + HV+NF+LP+ DYVHR+GRTGRA G+
Sbjct: 296 MRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGV 355
Query: 504 ATAFFNENNMSLARPLTELMQ-EANQEV 530
A + + + + L R + +L+Q + QEV
Sbjct: 356 AISLVSGDEVRLLRDIEKLLQSKMPQEV 383
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 164/421 (38%), Positives = 237/421 (56%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + G VP + + E + + ++ Y++PTP+QR AIPI + RD++
Sbjct: 285 EDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKTAAF P++ I ++R R + P A+I+APTREL+ QI E KF
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQE-HRDLGPYAIIMAPTRELAQQIEEETNKFGK 403
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G+K V GGA Q +L GV++++ATPGRL+D+LE + L Y+ LDEADR
Sbjct: 404 LLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADR 463
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGM-----------------------RQTMLFSATFPKE 345
MLDMGFEP ++K+++ M P M RQT++F+AT
Sbjct: 464 MLDMGFEPDVQKVLEYM--PDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSA 521
Query: 346 IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA 405
I+RLA +L + +G G T+ + Q V V E KR L+++L +Q Q
Sbjct: 522 IERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQF-------QP 574
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 465
++FV KKGAD L L GF T +HG + Q +RE AL++ K G + ILVATDVA
Sbjct: 575 PIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAG 634
Query: 466 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQE 525
RG+D+ V+ V+N+D+ I+DY HRIGRTGRAGK G A F ++ ++ L +++ E
Sbjct: 635 RGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVE 694
Query: 526 A 526
+
Sbjct: 695 S 695
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 703 (252.5 bits), Expect = 5.2e-71, Sum P(2) = 5.2e-71
Identities = 160/411 (38%), Positives = 235/411 (57%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
++ G + P V ++++ L I Y KPT +Q AIP GRD++ A+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKT AF P+ I ++ ++ G P+A+I+ PTREL+ QI E K F +
Sbjct: 466 SGKTIAFLLPMFRHIKDQRPLKTGEG-----PIAIIMTPTRELAVQIFRECKPFLKLLNI 520
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLER--ARVS-LQMIRYLALDEADRM 309
+ AYGGAPI Q+ +L+RG +I+V TPGR++D+L RV+ L YL LDEADRM
Sbjct: 521 RACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRM 580
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
D+GFEPQ+ +I+ + P RQT+LFSATFP+ ++ LA L + + VG
Sbjct: 581 FDLGFEPQVMRIINNI-RPD---RQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVA 636
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
+ Q VE E K S L++LL N + + TLVFV+ ++ ADAL L G+
Sbjct: 637 SEVEQIVEVRPEESKFSRLLELLGELYNNQLDVR---TLVFVDRQESADALLSDLMKRGY 693
Query: 430 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 489
+ +IHG + Q +R+ + +K+G +L+AT V ARGLD+ + VVN+D PN ++DYV
Sbjct: 694 TSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYV 753
Query: 490 HRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
HR+GRTGRAG +G+A F A + + ++ + Q VP L AS+
Sbjct: 754 HRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTLASQ 804
Score = 39 (18.8 bits), Expect = 5.2e-71, Sum P(2) = 5.2e-71
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 109 VGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNT 146
+G EQ + EE+ DAY V T+ P +NT
Sbjct: 289 LGNEQAASMEEDEVDPLDAYMASLVGTTDTIRPGLLNT 326
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 163/403 (40%), Positives = 243/403 (60%)
Query: 140 VPPAVNTFAEI-DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 198
+P V F ++ + + NIR+ + KPTP+Q A PI + G DL+ AQTG+GKT A
Sbjct: 234 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 293
Query: 199 FCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAY 258
+ P + + + RG P L+LAPTREL+ Q+ E K++Y+ G K + Y
Sbjct: 294 YLMPGFIHLASQPIPKDKRGG----PGMLVLAPTRELALQVEAECLKYTYK-GFKSICIY 348
Query: 259 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 318
GG Q+ + +GVDI++ATPGRL DL ++L+ I YLA +EADRMLDMGFEPQI
Sbjct: 349 GGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQI 407
Query: 319 RKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SSTDLIVQRVE 377
KI+ +D+ P RQT++ SAT+P ++RLA +L N + + VG + ++ + + Q+V
Sbjct: 408 MKIL--IDVRPD--RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVI 463
Query: 378 FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGD 437
++E +K++ + + + + + K ++FV K AD + L + G P ++HGD
Sbjct: 464 VINEEEKKAFMENFI-----DSMKPKDK-AIIFVGKKSTADDIASDLGVQGVPVQSLHGD 517
Query: 438 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 497
R Q +RE AL FK GK ILVATD+A+RGLD+ + HV NFD P +I++YVHR+GRTGR
Sbjct: 518 REQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGR 577
Query: 498 AGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
AG++G A + + A L +++Q A Q VP L A R
Sbjct: 578 AGRTGKAVTLITKKDWKAASELIDILQRAKQVVPDELISMAER 620
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 159/374 (42%), Positives = 231/374 (61%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
+I++ + KPTP+Q A PI + G DL+ AQTG+GKT ++ P G + RG
Sbjct: 229 SIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMP---GFIHLNSQPVSRG 285
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
R P L+L PTREL+ Q+ E K+SY+ G+K V YGG Q++++ +GVDI++
Sbjct: 286 KRNG-PGMLVLTPTRELALQVGAECSKYSYK-GLKSVCIYGGGNRKGQIQDIMKGVDIII 343
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V+L+ I YL LDEAD+MLD+GFE QI KI+ +D+ P RQT++
Sbjct: 344 ATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKIL--LDVRPD--RQTIMT 399
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P I++LA +L + + VG + + D + Q + E +KRS + L +
Sbjct: 400 SATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQS--- 456
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI 457
+ K + +VFV K AD L L + G P ++HGDR Q +RE AL FK+GK I
Sbjct: 457 --LSPKDKV-IVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKI 513
Query: 458 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLAR 517
L+ATD+A+RGLD+ V HV N++ P +I++YVHR+GRTGRAGK G + +++ +A
Sbjct: 514 LIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVAG 573
Query: 518 PLTELMQEANQEVP 531
L E++Q ANQ +P
Sbjct: 574 ELIEILQRANQSIP 587
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 687 (246.9 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 161/422 (38%), Positives = 248/422 (58%)
Query: 127 AY-EDIP-VETSGENVPPAVNTFAEIDLG-EALNLNIRRCKYVKPTPVQRHAIPISIGGR 183
AY E++ + G + P + T+A+ + + +N+ +++ +Y KPT +Q AIP + GR
Sbjct: 284 AYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV-LKKFEYSKPTSIQAQAIPSIMSGR 342
Query: 184 DLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEA 243
D++ A+TGSGKT AF P+ I+ + ++ G P+A+ILAPTREL+ Q + EA
Sbjct: 343 DVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG-----PIAVILAPTRELAMQTYKEA 397
Query: 244 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRY 300
KF+ G+KV YGG I++Q+ +L+RG +I+V TPGR++D+L +V+ L+ + Y
Sbjct: 398 NKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTY 457
Query: 301 LALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFL 360
L LDEADRM D GFEPQI K+V + P +QT+LFSATFP+ ++ LA L + +
Sbjct: 458 LVLDEADRMFDKGFEPQIMKVVNNI-RPD---KQTVLFSATFPRHMEALARKVLDKPVEI 513
Query: 361 AVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL 420
VG I Q E K L++LL G++ ++ ++VFV+ ++ AD +
Sbjct: 514 LVGGKSVVCSDITQNAVICAEHQKFLKLLELL------GMYYEEGSSIVFVDKQEKADDI 567
Query: 421 EHWLYMNGFPATT-IHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNF 479
L G+ + +HG Q +R+ ++ FK+G +LVAT VAARGLD+ ++ VVN+
Sbjct: 568 VDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNY 627
Query: 480 DLPNDIDDYVHRIGRTGRAGKSGLATAF-FNENNMSLARPLTELMQEANQEVPAWLNRYA 538
D PN +DYVHR+GRTGRAG+ G A F E+ +A + + A + PA L
Sbjct: 628 DCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCKPPADLKAMF 687
Query: 539 SR 540
R
Sbjct: 688 ER 689
Score = 48 (22.0 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 509 NENNMSLARP-LTELMQEANQEVPAWLNRYASRANY 543
+E N+ A+ + +M+EA +++ A L R ++A Y
Sbjct: 933 SERNLKAAKEEIIRIMKEAFRQLTAQLQRGGTQARY 968
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 163/408 (39%), Positives = 236/408 (57%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED V G +P + ++ E + + I + Y +PTP+QR AIPI + RD++
Sbjct: 378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 437
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT AF P++S I ++R P A+I+APTREL+ QI E KF
Sbjct: 438 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQG-PYAIIMAPTRELAQQIEEETTKFGQ 496
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G++ VV GG +Q L G +I++ATPGRL+D+LE + L Y+ LDEADR
Sbjct: 497 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADR 556
Query: 309 MLDMGFEPQIRKIVQQM---DMPPPG------------------MRQTMLFSATFPKEIQ 347
M+DMGFEP ++KI++ M ++ P RQT++F+AT P ++
Sbjct: 557 MIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVE 616
Query: 348 RLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALT 407
RLA +L + +G VG T+ Q V + E+DKR LM++L ++ V
Sbjct: 617 RLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPV------- 669
Query: 408 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 467
++FV KKGAD L L G+ + T+HG + Q++RE AL + KSG ILVATDVA RG
Sbjct: 670 IIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRG 729
Query: 468 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSL 515
+DI V+ V+N+D+ I+DY HRIGRTGRAGK+G A +F +++ +L
Sbjct: 730 IDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSAL 777
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 161/399 (40%), Positives = 231/399 (57%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TG
Sbjct: 243 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 302
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F +
Sbjct: 303 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 357
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
+ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DM
Sbjct: 358 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 417
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + +
Sbjct: 418 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 473
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE F K + L L ++G L+FV K A+ L + L
Sbjct: 474 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 527
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
+HGD Q ER + FK PILVATDVAARGLDIP + V+N+D+ DID + HR
Sbjct: 528 GLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHR 587
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
IGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 588 IGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 626
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 161/399 (40%), Positives = 231/399 (57%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TG
Sbjct: 236 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 295
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F +
Sbjct: 296 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 350
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
+ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DM
Sbjct: 351 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 410
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + +
Sbjct: 411 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 466
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE F K + L L ++G L+FV K A+ L + L
Sbjct: 467 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 520
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
+HGD Q ER + FK PILVATDVAARGLDIP + V+N+D+ DID + HR
Sbjct: 521 GLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHR 580
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
IGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 581 IGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 619
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 161/399 (40%), Positives = 231/399 (57%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ SG P ++FA E L IR+ +Y +PTP+Q +P+++ GRD++ A+TG
Sbjct: 241 LRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 300
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAAF +P++ IM ++ ++ G P+A+I+ PTREL QIH E K+F +
Sbjct: 301 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 355
Query: 253 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 312
+ V YGG + +Q + L+ G +I+V TPGRL+D +++ +LQ + YL DEADRM DM
Sbjct: 356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 415
Query: 313 GFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI 372
GFE Q+R I + P RQT+LFSATF K+I++LA D L + I + G +G + + +
Sbjct: 416 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 471
Query: 373 VQRVE-FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE F K + L L ++G L+FV K A+ L + L
Sbjct: 472 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 525
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
+HGD Q ER + FK PILVATDVAARGLDIP + V+N+D+ DID + HR
Sbjct: 526 GLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHR 585
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
IGRTGRAG+ G+A + + A L ++ ANQ V
Sbjct: 586 IGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 165/382 (43%), Positives = 225/382 (58%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+FA + L EAL I Y +PTPVQ+ AIP + GRDLM AQTG+GKT F PI+
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVA--YGGAPI 263
+ + + + P L+L PTREL++Q+H K Y +K V A +GG +
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKL--YARDLKFVSACIFGGVGM 119
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N Q++ + RGVD+LVA PGRL+DL + V L + L LDEADRMLDMGF ++K++
Sbjct: 120 NPQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
++ P RQ +LFSATF K+I LA L N + V ++ + I QRV + S
Sbjct: 180 RL----PAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASH 235
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
KR+ L L+ A G LVF TK GA+ L +L +G A IHG+++Q R
Sbjct: 236 KRALLAHLITA-------GAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNAR 288
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
AL FK+G+ ILVATD+AARGLDI + HVVNF+LPN +DYVHRIGRTGRAG+SG
Sbjct: 289 TKALADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGE 348
Query: 504 ATAFFNENNMSLARPLTELMQE 525
A + + L + + + ++
Sbjct: 349 AISLVAPDEEKLLKSIERMTKQ 370
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 710 (255.0 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 165/436 (37%), Positives = 249/436 (57%)
Query: 104 PFGDDVGAEQPVAEEENTGINFDAYE-DIP-VETSGENVPPAVNTFAEIDLGEALNLNIR 161
PF + E P T + + Y D+ ++ G+ P + T+A+ + + +R
Sbjct: 468 PFRKNFYVEVPELTRM-TAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLR 526
Query: 162 RCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRT 221
R + KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ I+ + ++ G+
Sbjct: 527 RLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGA-- 584
Query: 222 VYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATP 281
+A+I+APTREL QI + +KFS G++ V YGG I++Q+ EL+RG +I+V TP
Sbjct: 585 ---IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTP 641
Query: 282 GRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
GR++D+L RV+ L+ + Y+ LDEADRM DMGFEPQ+ +I+ + P RQT++F
Sbjct: 642 GRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNV-RPD---RQTVMF 697
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVAN 398
SATFP++++ LA L I + VG + Q V +++ K L++LL
Sbjct: 698 SATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELL------ 751
Query: 399 GVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 458
G++ + +VFV+ ++ AD L L +P ++HG Q +R+ + FKSGK +L
Sbjct: 752 GIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLL 811
Query: 459 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARP 518
+AT VAARGLD+ + VVN+D+PN +DYVHR GRTGRAGK G A F A
Sbjct: 812 IATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGD 871
Query: 519 LTELMQEANQEVPAWL 534
+ M + +PA L
Sbjct: 872 IIRAMDLSGTLIPAEL 887
Score = 40 (19.1 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 27 RPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGPRWGSGSR 69
R T++ V P L N S S + + PA P SG +
Sbjct: 210 RDTKAAVVAPSLVNSAKKWSLEDESEEDDSNPA--PPLDSGKK 250
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 168/403 (41%), Positives = 237/403 (58%)
Query: 140 VPPAVNTFAEI-DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAA 198
+P V F ++ + + NIR+ + KPTP+Q A PI + G DL+ AQTG+GKT A
Sbjct: 47 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 106
Query: 199 FCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAY 258
+ P + + + RG P L+LAPTREL+ Q+ E K++Y+ G K + Y
Sbjct: 107 YLMPGFIHLASQPIPKDKRGG----PGMLVLAPTRELALQVEAECLKYTYK-GFKSICIY 161
Query: 259 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 318
GG Q+ + +GVDI++ATPGRL DL ++L+ I YL LDEADRMLDMGFEPQI
Sbjct: 162 GGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQI 221
Query: 319 RKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEF 378
KI+ +D+ P RQT++ SAT+P ++RLA +L N + + VG + DL V V
Sbjct: 222 MKIL--IDVRPD--RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTL----DLAVSGVVL 273
Query: 379 VH-ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGD 437
+ + DK + + QV N + +VFV+ AD + L + G P ++HGD
Sbjct: 274 KYLQFDK--DIFTWKYMQV-NAQSFCTDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGD 330
Query: 438 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 497
R Q +RE AL FK GK ILVATD+A+RGLD+ + HV NFD P +I++YVHR+GRTGR
Sbjct: 331 REQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGR 390
Query: 498 AGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
AG++G A + + A L +++Q A Q VP L A R
Sbjct: 391 AGRTGKAVTLITKKDWKAASELIDILQRAKQVVPDELISMAER 433
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 712 (255.7 bits), Expect = 5.4e-70, P = 5.4e-70
Identities = 169/449 (37%), Positives = 255/449 (56%)
Query: 96 DRREREVNPFGDDVGAEQP----VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEID 151
D ++ + PF + E P ++ EE + + E I V+ G+ P + T+ +
Sbjct: 307 DHQKIQYEPFRKNFYVEVPELARMSPEEVSEYRLEL-EGISVK--GKGCPKPIKTWVQCG 363
Query: 152 LG-EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE 210
+ + LN +++ Y KPTP+Q AIP + GRDL+ A+TGSGKT AF P+ I+
Sbjct: 364 ISMKVLNA-LKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILD- 421
Query: 211 QYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLREL 270
QRP G PLA+I+ PTREL+ QI E KKFS ++VV YGG I++Q+ EL
Sbjct: 422 ---QRPVGEAEG-PLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAEL 477
Query: 271 ERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM 327
+RG +I+V TPGR++D+L RV+ L+ + Y+ +DEADRM DMGFEPQ+ +IV +
Sbjct: 478 KRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNV-R 536
Query: 328 PPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSH 387
P RQT++FSATFP+ ++ LA L+ + + VG + Q V + E K
Sbjct: 537 PD---RQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLK 593
Query: 388 LMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELAL 447
L+++L G + ++ ++FV+ ++ AD L L +P ++HG Q +R+ +
Sbjct: 594 LLEIL------GHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSII 647
Query: 448 RSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAF 507
FK+G +LVAT VAARGLD+ + VVN+ PN +DYVHR GRTGRAG G A F
Sbjct: 648 NDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTF 707
Query: 508 FNENNMSLARPLTELMQEANQEVPAWLNR 536
E + + + ++ + VPA L +
Sbjct: 708 ITEGQARYSGDILKALELSGSSVPAELEQ 736
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 156/379 (41%), Positives = 226/379 (59%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
++ F + L + ++ + Y PTP+Q AIP+ I GRD++ AQTG+GKT AF PI
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ + R RG+R L+LAPTREL+ QI + ++VV+ GGA I
Sbjct: 66 LDRLSRNASPAPVRGTRV-----LVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKI 120
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+R+LERG ILVATPGRL+DL+E+ VSL + L LDEAD+MLD+GF +R I +
Sbjct: 121 GGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAK 180
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ P RQT+ FSAT PK ++ LA+ FL N ++V ++ I QRV FV + +
Sbjct: 181 NV----PSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPE 236
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
K S L++ + +VF TK GAD + L + IHG+++Q +R
Sbjct: 237 KASLLIEKIRDPELRSA-------IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQR 289
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
E AL +FK+G+ PILVATD+AARG+ + + HV+N+DLP+ + +VHRIGRT RAG SG+
Sbjct: 290 EKALEAFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGV 349
Query: 504 ATAFFNENNMSLARPLTEL 522
A +F + + R + +L
Sbjct: 350 AISFCSRDERPTLRAIEKL 368
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 158/412 (38%), Positives = 241/412 (58%)
Query: 134 ETSGENVPPAVNTFAEIDLGEALNL--NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
E S +PP VN+F + G ++ IR+ + KP+P+Q P+ + G+D + +QT
Sbjct: 72 EESTVKIPPPVNSFEQA-FGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQT 130
Query: 192 GSGKTAAFCFPIISGIMRE--QYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
GSGKT AF P + I + QY + + P L+L+PTREL+ QI E KK+SY
Sbjct: 131 GSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPS-PFVLVLSPTRELAQQIEGEVKKYSYN 189
Query: 250 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
G K V YGG +Q+ GV+I++ATPGRL DL +SL + Y+ LDEADRM
Sbjct: 190 -GYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRM 248
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-SS 368
LDMGFE IR+I+ ++ P R L SAT+P+ +++L + + G + +S
Sbjct: 249 LDMGFEVAIRRIL--FEIRPD--RLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTS 304
Query: 369 TDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNG 428
+ Q EFV + + ++++ A HG+ ++FV++K AD L M G
Sbjct: 305 CKSVTQFFEFVPHDSRFLRVCEIVNFLTA--AHGQNYKMIIFVKSKVMADHLSSDFCMKG 362
Query: 429 FPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 488
+ +HG R+Q +RE++L +SG+ ILVATD+A+RG+D+P + HV+N+D P DI++Y
Sbjct: 363 INSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEY 422
Query: 489 VHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
VHR+GRTGRAG+ G A +F N+ S L ++++++ QEVP L R A +
Sbjct: 423 VHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRDAEK 474
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 159/429 (37%), Positives = 238/429 (55%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + T G P + T+ E +L + IR+ Y KP+P+Q +IPIS+ GRD++
Sbjct: 397 EDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGI 456
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT AF P++ I ++ + + + P AL++APTREL QI E + F+
Sbjct: 457 AETGSGKTCAFVIPMLIYISKQPRLTKD--TEADGPYALVMAPTRELVQQIEKETRNFAQ 514
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G +VV GG I Q ++ +G +I++ATPGRL D LE+ + L Y+ LDEAD
Sbjct: 515 HFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADM 574
Query: 309 MLDMGFEPQIRKIVQQM----------DMPPPG-------MRQTMLFSATFPKEIQRLAS 351
M+D+GFEPQ+ ++ M +M R T+LFSAT P +++L+
Sbjct: 575 MIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLVEKLSK 634
Query: 352 DFLANYIFLAVGRVGSSTDLIVQRVEFVH-ESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+L + +G G D I Q V FV E+DK+ HL L+ G ++F
Sbjct: 635 KYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIK-------DGPPPPIIIF 687
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
V KK D + L T +H R+Q++RE AL FK K +L+AT VA+RG+ +
Sbjct: 688 VNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATGVASRGIHV 747
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
V HV+NFD+P +I+DY HRIGRTGRAG +GLA++F + ++ + L +++ N V
Sbjct: 748 DGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITDKDVEIMYDLKQILTSTNNIV 807
Query: 531 PAWLNRYAS 539
P L ++ S
Sbjct: 808 PIELLKHPS 816
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 163/382 (42%), Positives = 223/382 (58%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+FA + L EAL I Y +PTPVQ+ AIP + GRDLM AQTG+GKT F PI+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVA--YGGAPI 263
+ + + P L+L PTREL++Q+H E+ K Y +K V A +GG +
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVH-ESFKL-YARDLKFVSACIFGGVGM 119
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N Q++ + RGVD+LVA PGRL+DL + V L + L LDEADRMLDMGF ++K++
Sbjct: 120 NPQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
++ P RQ +LFSATF +I LA L N + V ++ + I QRV + +
Sbjct: 180 RL----PAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANH 235
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
KRS L L+ G LVF TK GA+ L +L +G A IHG+++Q R
Sbjct: 236 KRSLLAHLITV-------GAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNAR 288
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
AL FK+G I+VATD+AARGLDI + HVVNF+LPN +DYVHRIGRTGRAG+SG
Sbjct: 289 TKALADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGE 348
Query: 504 ATAFFNENNMSLARPLTELMQE 525
A + + L + + + ++
Sbjct: 349 AISLVAPDEEKLLKSIERMTKQ 370
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 140/282 (49%), Positives = 198/282 (70%)
Query: 112 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPV 171
E + TGINFD Y+ I VE SG + PPA+ TF E +L + LN NI + Y K TPV
Sbjct: 235 EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 294
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAP 231
Q+++IPI + GRDLMACAQTGSGKTAAF PI++ +M + + R P +I+AP
Sbjct: 295 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAP 353
Query: 232 TRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 291
TREL +QI++EA+KFS+ T V+ VV YGG + +R++ +G +IL ATPGRL+D++ +
Sbjct: 354 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 413
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ I+YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA+
Sbjct: 414 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 473
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLL 392
+FL +NY+F+AVG+VG + + Q V V + KR L+++L
Sbjct: 474 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEIL 515
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 167/451 (37%), Positives = 259/451 (57%)
Query: 98 REREVNPFGDDVGAEQPVAEE------ENTGINFDAYEDIPVETSGEN---VPPAVNTFA 148
++RE+N + D++ P+ + E+ D ++ + EN +P ++T
Sbjct: 85 KKREIN-WDDELKNMAPIRKRLIDLPTEDQQETMDFIKEFEISIKKENNFYLPKPIDTIE 143
Query: 149 EIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM 208
+ + N K+ KPTPVQ PI++ G D++ ++TGSGKT +F P I I+
Sbjct: 144 SVPFQSTIK-NFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHIL 202
Query: 209 REQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLR 268
+ PR S P L++APTREL++QI+ EA+++ +++ YGGAP Q
Sbjct: 203 AQ-----PRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQL 257
Query: 269 ELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP 328
+L R I+V TPGR++D +E +SL+ I +L +DEADR+++MGFE QI I + P
Sbjct: 258 QLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSI-RP 316
Query: 329 PPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL-IVQRVEFVH-ESDKRS 386
RQ + +SAT+PK++ A + I L +G + + I Q+ + V ++DK
Sbjct: 317 D---RQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVD 373
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNG--FPATTIHGDRTQQERE 444
LMD L ++ + ++A TL+F TKKGAD L+H++ NG T+HGD Q RE
Sbjct: 374 ALMDTL-GEIYSA--DEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRE 430
Query: 445 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 504
++ FK+ + I+VATDVA+RGLDI ++HV+NF LP+D + YVHRIGRTGRAG G +
Sbjct: 431 RIVQDFKNKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGALGTS 490
Query: 505 TAFFNENN---MSLARPLTELMQEANQEVPA 532
+ + N+ M L LT L+Q + QEVP+
Sbjct: 491 HSILSNNSLDDMELVGDLTNLLQRSEQEVPS 521
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 163/411 (39%), Positives = 243/411 (59%)
Query: 135 TSGEN--VPPAVNTFAEI--DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQ 190
T GE +P TF + E + +IRR + KPTP+Q + PI + G DL+ AQ
Sbjct: 188 TEGEKRPIPKPTCTFEDAFQQYPEIMQ-SIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQ 246
Query: 191 TGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQT 250
TG+GKT ++ P I + ++ R P L+L PTREL+ Q+ E K+ Y+
Sbjct: 247 TGTGKTLSYLMPGFIHIHSQPVSRKQRNG----PGMLVLTPTRELALQVEAECSKYLYK- 301
Query: 251 GVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 310
G+K V YGG Q++++ +GVDI++ATPGRL DL V+L+ I YL LDEAD+ML
Sbjct: 302 GLKSVCIYGGGNRKGQIQDVTKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKML 361
Query: 311 DMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST- 369
D+GFE QI KI+ +D+ P RQT++ +A++P +RLA +L + + VG + T
Sbjct: 362 DLGFEHQIMKIL--LDVRPD--RQTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTV 417
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGF 429
+ + Q + E +KRS + + L + + K + +VFV K AD L L + G
Sbjct: 418 NTVKQNIIVTTEEEKRSLVKEFLQS-----LSPKDKV-IVFVSRKLVADDLSSDLSIQGI 471
Query: 430 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 489
P ++HGDR Q +R+ AL F++G+ IL+ATD+AARGLD+ V HV N++ P +I++YV
Sbjct: 472 PVQSLHGDREQSDRDQALEDFRTGRVKILIATDLAARGLDVSDVTHVYNYNFPRNIEEYV 531
Query: 490 HRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
HR+GRTGRAGK G + +++ +A L +++Q ANQ VP L A R
Sbjct: 532 HRVGRTGRAGKIGESITLVTQDDWKIADELIKILQRANQIVPPSLRSMADR 582
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 163/408 (39%), Positives = 235/408 (57%)
Query: 136 SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGK 195
S EN+ P + F E+D+ L ++ Y +PTP+Q P + GRD++ A+TGSGK
Sbjct: 159 SSENLLPILQ-FDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVVGIAETGSGK 215
Query: 196 TAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVV 255
T AF P + QY+ +++V P L+++PTREL+ Q + T +K V
Sbjct: 216 TVAFGIPAL------QYLNGLSDNKSV-PRVLVVSPTRELAIQTYENLNSLIQGTNLKAV 268
Query: 256 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 315
V YGGAP ++Q R + +++ TPGRL+DL+ + + YL LDEADRMLD GFE
Sbjct: 269 VVYGGAPKSEQARAA-KNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFE 327
Query: 316 PQIRKIVQQMDMPPP-GMRQTMLFSATFPKEIQRLASDFLANYIFLAVG--RVGSSTDLI 372
IR I+ P G RQT+ FSAT+P+ ++ LA+ FL + + + +G + +S + I
Sbjct: 328 QDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQN-I 386
Query: 373 VQRVEFVHESDKRSHLMD-LLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
Q VE + + + ++D LL +++G GK L+FV KK A +E L +
Sbjct: 387 TQIVEILDDPRSKERMLDNLLRKHLSSG--GKDDKILIFVLYKKEAARVEGTLARK-YNV 443
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHGD +Q R AL FKSGK P+LVATDVAARGLDIP V V+N P I+DYVHR
Sbjct: 444 VGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHR 503
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYAS 539
IGRTGRA G A FF + S A L ++++A Q++P L ++ +
Sbjct: 504 IGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDIPEGLFKFGT 551
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 693 (249.0 bits), Expect = 3.4e-69, Sum P(2) = 3.4e-69
Identities = 164/431 (38%), Positives = 252/431 (58%)
Query: 112 EQPV-AEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTP 170
E PV A T + D ++ V+ +G++ P + ++A+ L E ++L +++ +Y KPT
Sbjct: 476 EVPVLANMTETEV-LDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTS 534
Query: 171 VQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILA 230
+Q IP + GRDL+ A+TGSGKT AF P+ I+ + P+ + +ALI++
Sbjct: 535 IQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQ-----PKSAPGEGMIALIMS 589
Query: 231 PTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL-- 288
PTREL+ QIHVE KKFS G++ YGGA I++Q+ EL+RG DI+V TPGR++D+L
Sbjct: 590 PTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCA 649
Query: 289 -ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQ 347
R +L+ + +L LDEADRM DMGF PQI IV + P RQT++FSATFP +++
Sbjct: 650 NNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSI-RPD---RQTIMFSATFPPKVE 705
Query: 348 RLASDFLANYI-FLAVGRVGSSTDLIVQRVEFVHESDKR-SHLMDLLHAQVANGVHGKQA 405
+A L + +A GR S+D I Q VE V ++ R L++LL G
Sbjct: 706 NVAKKILNKPLEIIAGGRSIVSSD-IEQFVE-VRPTETRFRRLIELLSIWYHKGQ----- 758
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 465
L+F ++ D L L + + ++HG + Q +R+ + FK+ IL+AT +A+
Sbjct: 759 -ILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLAS 817
Query: 466 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQE 525
RGLDI + VVNFD P+ ++DYVHR+GRTGRAG G A F + + + + +++
Sbjct: 818 RGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFSSSIIKALEQ 877
Query: 526 ANQEVPAWLNR 536
+ +VP L +
Sbjct: 878 SGSKVPDELRK 888
Score = 42 (19.8 bits), Expect = 3.4e-69, Sum P(2) = 3.4e-69
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 26 PRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPASGP 62
P+ T PH++ PP P SR P + P
Sbjct: 112 PQQQTQTQQQPHIQAPPPAK---PRKSRFDQAPETIP 145
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 162/401 (40%), Positives = 234/401 (58%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
GE +P + +F E+ +A+ +++ V PTP+Q IP + GRD++ A TGSGKT
Sbjct: 29 GEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 88
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
F PII + EQ + P R P LI+ P+ ++ H ++ Y K++
Sbjct: 89 LVFTLPIIMFCL-EQEKRLPFCKREG-PYGLIICPSVNVAKHTHHGIIEY-Y---CKLLE 142
Query: 257 AYGGAPINQQL----RELERGVDIL-VATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
G + L ++ ++++ +ATPGRL+DLL + VSL + RYLALDEADRM+D
Sbjct: 143 DEGAPQMRCALCIGGMSVKEQMEVVKLATPGRLMDLLNKKMVSLDICRYLALDEADRMID 202
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL 371
MGFE IR I G RQT+LFSAT PK+IQ A L I + VGR G+++
Sbjct: 203 MGFEEDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLD 258
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
++Q VE+V E K +L++ L L+F E K DA+ +L + G A
Sbjct: 259 VIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVEA 310
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
IHG + Q+ER A+ +FK GK +LVATDVA++GLD P + HVVN+D+P +I++YVHR
Sbjct: 311 VAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHR 370
Query: 492 IGRTGRAGKSGLATAFFNEN-NMSLARPLTELMQEANQEVP 531
IGRTGR+GK+G+AT F N+ + S+ L L+ EA Q+VP
Sbjct: 371 IGRTGRSGKTGIATTFINKGCDESVLMDLKALLVEAKQKVP 411
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 163/411 (39%), Positives = 245/411 (59%)
Query: 130 DIPVET-SGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
+I VE S ++ P ++ F ++ L A+ + K+ KPTP+Q + P + G+D++
Sbjct: 140 EITVEDPSSSSLRPILS-FDQVQLTSAITSKLS--KFDKPTPIQSVSWPFLLSGKDVIGV 196
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKT AF P I+ I+ ++T+ L ++PTREL+ QI+ + +
Sbjct: 197 AETGSGKTFAFGVPAINNIITTG------NTKTLS--VLCISPTRELALQIYDNLIELTA 248
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
+GV V YGG + Q+R+++ +++VATPGRLVDL+ ++L + YL LDEADR
Sbjct: 249 DSGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGRLVDLINDGAINLGKVNYLVLDEADR 307
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG-- 366
ML+ GFE I+ I+ RQT++F+AT+PKE++ LA++F+ + + + VG
Sbjct: 308 MLEKGFEEDIKTIISNTSNSE---RQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDEL 364
Query: 367 SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYM 426
S+ I Q VE +++ DK L+ LL AN L+F KK A +E++L
Sbjct: 365 SANKRITQVVEVINKFDKEKKLIQLLRKYNAN--ESSDNKILIFALYKKEASRIENFLKR 422
Query: 427 NGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDID 486
N F IHGD +QQ+R AL +FKSG++ +L+ATDVAARGLDIP+V V+N P I+
Sbjct: 423 NRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIE 482
Query: 487 DYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRY 537
DYVHRIGRTGRAG G A F E+ L+ L +++ ANQ VP L ++
Sbjct: 483 DYVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPEELLKF 533
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 584 (210.6 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 127/319 (39%), Positives = 196/319 (61%)
Query: 227 LILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 286
LIL PTREL Q+ E K F +K V YGG P Q+ L++G DI+VATPGRL+D
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490
Query: 287 LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEI 346
LE ++L Y+ +DEADR+LDMGFE Q+RKI+ Q++ +Q + +AT+P+++
Sbjct: 491 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKN----KQLLFLTATWPEQV 546
Query: 347 QRLASDFLA-NYIFLAVGRVGSSTDLIVQRVEFVHES-DKRSHLMDLLHAQVANGVHGKQ 404
++LA DF + + + + +G+ + + +++ + S D + L+D L N
Sbjct: 547 RKLAYDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYENNK---- 602
Query: 405 ALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVA 464
L+F +TK+ D L L + + A +IHGD+ Q+ER+ L ++K+ + ILVATDVA
Sbjct: 603 --ILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVA 660
Query: 465 ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEN-----NMSLARPL 519
+RGLDI +++ V+N+D+PN I+DY+HRIGRTGRAGK G + FF+ + + A+ L
Sbjct: 661 SRGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSILFFSYDYYMPQKLKFAKEL 720
Query: 520 TELMQEANQEVPAWLNRYA 538
+L+ + NQ VP L A
Sbjct: 721 IKLLNKTNQTVPPQLKEIA 739
Score = 130 (50.8 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+N F+++ E++ LN K+ +PT +Q+ PI++ G+DL+ A+TGSGKT AF P
Sbjct: 287 INKFSDVCFHESI-LNYLNNKFSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPC 345
Query: 204 ISGIMREQYV 213
I++ + +
Sbjct: 346 FMHILKHKEI 355
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 156/358 (43%), Positives = 220/358 (61%)
Query: 160 IRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGS 219
I C Y K TP+Q+ AIP G+D++A AQTG+GKTAAF PI+ ++ V+ P +
Sbjct: 16 ISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL-----QKMVENPSET 70
Query: 220 RTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 279
LIL PTREL++Q+ + +S V+ YGG + Q ++L+RG DI+VA
Sbjct: 71 LKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVA 130
Query: 280 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFS 339
TPGRL++ L +SL + +L LDEADRMLDMGF I+KI+Q ++ RQ +LFS
Sbjct: 131 TPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKK----RQNLLFS 186
Query: 340 ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANG 399
ATF +++LA++ + ++ + ++ D + Q V V + KR L +L+ G
Sbjct: 187 ATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELI------G 240
Query: 400 VHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILV 459
Q + LVF T+ AD L L ++G P+ +HG++ Q R ALR F SGK +LV
Sbjct: 241 KKNWQQV-LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLV 299
Query: 460 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNMSLA 516
AT+VAARGLDIP + +VVNFDLP +DYVHRIGRTGRAGKSG+A +F + E +LA
Sbjct: 300 ATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLA 357
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 696 (250.1 bits), Expect = 7.0e-68, P = 7.0e-68
Identities = 170/447 (38%), Positives = 245/447 (54%)
Query: 116 AEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRH 174
+ EE T ++ + ED + G VPP + + E +L L I++ KY KPTP+Q
Sbjct: 668 SREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQ 727
Query: 175 AIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRE 234
AIPI++ RDL+ A+TGSGKTAAF P++S + +Q + P AL++AP+RE
Sbjct: 728 AIPIALEMRDLIGIAETGSGKTAAFVLPMLSYV--KQLPPLTYETSQDGPYALVIAPSRE 785
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L+ QI+ E KF+ + V GG Q EL RGV+I++ TPGRL D LE+A
Sbjct: 786 LAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTV 845
Query: 295 LQMIRYLALDEADRMLDMGFEPQIRKIV-----------------QQMDMPPPG---MRQ 334
L Y+ LDEADRM+DMGFE + I+ Q+ M G R
Sbjct: 846 LNQCNYVILDEADRMMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRL 905
Query: 335 TMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHA 394
T +FSAT P ++RL+ +L ++++G G+ I Q++EF+ E K+ L ++L
Sbjct: 906 TQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEILEM 965
Query: 395 QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGK 454
+ +VFV KK AD + + + A +HG + Q+ RE L +FK+ +
Sbjct: 966 Y--------EPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAE 1017
Query: 455 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMS 514
ILVATDVA RG+D+ V V+NFD+P DI+ Y HRIGRTGRAG GLA +F E++
Sbjct: 1018 FDILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSH 1077
Query: 515 LARPLTELMQEANQEVPAWL-NRYASR 540
L L + + +N VP L N AS+
Sbjct: 1078 LFYDLKQFLISSNNIVPLELANNPASK 1104
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 696 (250.1 bits), Expect = 7.0e-68, P = 7.0e-68
Identities = 170/447 (38%), Positives = 245/447 (54%)
Query: 116 AEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRH 174
+ EE T ++ + ED + G VPP + + E +L L I++ KY KPTP+Q
Sbjct: 668 SREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQ 727
Query: 175 AIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRE 234
AIPI++ RDL+ A+TGSGKTAAF P++S + +Q + P AL++AP+RE
Sbjct: 728 AIPIALEMRDLIGIAETGSGKTAAFVLPMLSYV--KQLPPLTYETSQDGPYALVIAPSRE 785
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 294
L+ QI+ E KF+ + V GG Q EL RGV+I++ TPGRL D LE+A
Sbjct: 786 LAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTV 845
Query: 295 LQMIRYLALDEADRMLDMGFEPQIRKIV-----------------QQMDMPPPG---MRQ 334
L Y+ LDEADRM+DMGFE + I+ Q+ M G R
Sbjct: 846 LNQCNYVILDEADRMMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRL 905
Query: 335 TMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHA 394
T +FSAT P ++RL+ +L ++++G G+ I Q++EF+ E K+ L ++L
Sbjct: 906 TQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEILEM 965
Query: 395 QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGK 454
+ +VFV KK AD + + + A +HG + Q+ RE L +FK+ +
Sbjct: 966 Y--------EPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAE 1017
Query: 455 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMS 514
ILVATDVA RG+D+ V V+NFD+P DI+ Y HRIGRTGRAG GLA +F E++
Sbjct: 1018 FDILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSH 1077
Query: 515 LARPLTELMQEANQEVPAWL-NRYASR 540
L L + + +N VP L N AS+
Sbjct: 1078 LFYDLKQFLISSNNIVPLELANNPASK 1104
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 158/393 (40%), Positives = 236/393 (60%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+++ L L + PTP+Q+ AIP + G+D++A AQTG+GKTAAF P+I
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ EQ QR S+ + AL+L PTREL+ Q+ + ++ T +K+V YGG +
Sbjct: 67 RFI-EQPWQREANSKEIR--ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKV 123
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
QL L GVDIL+ATPGRL+D + L + L LDEADRMLDMGF P ++++++++
Sbjct: 124 QLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +RQT+ FSATF +I+ +A + + I + V S+ + + Q V V + KR
Sbjct: 184 S---P-LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKR 239
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 445
L L+ ++ + +Q L VF +T++G+DAL L ++G A +I+GD++Q R+
Sbjct: 240 ELLSYLIGSK-----NWQQVL--VFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQK 292
Query: 446 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 505
AL FK+GK L+ATDVAARGLDI + VVN+D+P +DYVHRIGRTGRAG +GLA
Sbjct: 293 ALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAV 352
Query: 506 AFFNENNMSLARPLTELMQEANQEVPA-WLNRY 537
+ + + + L+ N +P WL +
Sbjct: 353 SLLSHDEQPQLEAIERLL---NTRLPQEWLKGF 382
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 158/393 (40%), Positives = 236/393 (60%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+++ L L + PTP+Q+ AIP + G+D++A AQTG+GKTAAF P+I
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ EQ QR S+ + AL+L PTREL+ Q+ + ++ T +K+V YGG +
Sbjct: 67 RFI-EQPWQREANSKEIR--ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKV 123
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
QL L GVDIL+ATPGRL+D + L + L LDEADRMLDMGF P ++++++++
Sbjct: 124 QLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +RQT+ FSATF +I+ +A + + I + V S+ + + Q V V + KR
Sbjct: 184 S---P-LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKR 239
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 445
L L+ ++ + +Q L VF +T++G+DAL L ++G A +I+GD++Q R+
Sbjct: 240 ELLSYLIGSK-----NWQQVL--VFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQK 292
Query: 446 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 505
AL FK+GK L+ATDVAARGLDI + VVN+D+P +DYVHRIGRTGRAG +GLA
Sbjct: 293 ALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAV 352
Query: 506 AFFNENNMSLARPLTELMQEANQEVPA-WLNRY 537
+ + + + L+ N +P WL +
Sbjct: 353 SLLSHDEQPQLEAIERLL---NTRLPQEWLKGF 382
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 149/425 (35%), Positives = 234/425 (55%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
ED + G+++P + + E L + +++ Y +P+ +QR AIP+ + +DL+
Sbjct: 233 EDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGI 292
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSY 248
A+TGSGKTAAF P+I I + + + + P A++LAPTREL+ QI VE KF+
Sbjct: 293 AETGSGKTAAFIIPLIIAISKLPPLTE--SNMHLGPYAVVLAPTRELAQQIQVEGNKFAE 350
Query: 249 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
G + V GG +Q ++ +G I+VATPGRL+D LER L Y+ +DEADR
Sbjct: 351 PLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADR 410
Query: 309 MLDMGFEPQIRKIVQQMDMP---------------PPGMRQTMLFSATFPKEIQRLASDF 353
MLDMGFE + KI+ + RQT++FSAT P + LA +
Sbjct: 411 MLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSY 470
Query: 354 LANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVET 413
L + L +G +G + D + QRVE + + K+ ++ ++ + ++FV
Sbjct: 471 LIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVE----EILESNRFSPPI-IIFVNL 525
Query: 414 KKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHV 473
K+ +A+ L G+ A T+HG ++Q++RE A+ ++ ILVATD+A RG+DIP+V
Sbjct: 526 KRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNV 585
Query: 474 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELM-QEANQEVPA 532
+ V+N+++ I+DY HRIGRTGRAGKSG A F + + L L+ + A +P
Sbjct: 586 SLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPD 645
Query: 533 WLNRY 537
L +
Sbjct: 646 ELRNH 650
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 160/412 (38%), Positives = 233/412 (56%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G P V +FA + L IR+ +Y +PTP+Q AIP ++ GRD++ A+TG
Sbjct: 253 LRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTG 312
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGV 252
SGKTAA+ +P I IM + ++ G P+A+I+ PTREL+ Q+ EAKKF +
Sbjct: 313 SGKTAAYLWPAIVHIMDQPDLKAGEG-----PVAVIVVPTRELAIQVFQEAKKFCKVYNI 367
Query: 253 KVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
+ AYGG +Q EL+ G +++V TPGR++DL++ + +L DEADRM D
Sbjct: 368 NPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFD 427
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL 371
MGFE Q++ I D P RQ ++FSATF ++++RLA D L + + + G VG +
Sbjct: 428 MGFEAQVKSI---SDHVRPD-RQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANAD 483
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPA 431
I Q+V + D + H L+ V GK L+FV K ++ + L M F
Sbjct: 484 IEQKVFVMQNQDVKLHW--LIRNLVEFASLGK---VLIFVTKKLDSEDVAKKLKMKDFDI 538
Query: 432 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 491
+HGD Q ER L F+ K+ ILVATDVAARGLDI + V+NFD+ DID +VHR
Sbjct: 539 VLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHR 597
Query: 492 IGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASRANY 543
IGRTGRAG G A E ++ + L + ++ +QEVP L A ++++
Sbjct: 598 IGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLAMKSSW 649
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 157/445 (35%), Positives = 256/445 (57%)
Query: 118 EENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
EE T ++ + ED + T G+N+P + + E + + L I + Y +PT VQR +I
Sbjct: 140 EEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASI 199
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMR--EQYVQRPRGSRTVYPLALILAPTRE 234
P+++ RD++ A+TGSGKT AF P+++ I+ E Y++ + S P+ LILAPTRE
Sbjct: 200 PLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNE--PVGLILAPTRE 257
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARV 293
L+ QI EA+KF + G +V+ GG + ++++ GV ++VATPGRLVD +ER V
Sbjct: 258 LALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIV 317
Query: 294 SLQMIRYLALDEADRMLDMGFEPQIRKIV------QQMDMPPPGM------RQTMLFSAT 341
L L +DEADRM+DMGFE + K++ +Q+ G R TM+F+AT
Sbjct: 318 DLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTAT 377
Query: 342 FPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH----ESDKRSHLMDLL--HAQ 395
+++L +L + +L +G G + D I Q EF+ E+ K + L+ ++ H +
Sbjct: 378 ISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWR 437
Query: 396 VANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 455
V + L ++F K D+L L N IHG ++Q RE A+ +F++ ++
Sbjct: 438 VT-----ENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFRNHES 492
Query: 456 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSL 515
+L+ATDVAARG+DIP+V V+N+ + D+Y+HRIGRTGRAG G + F ++ + +
Sbjct: 493 EVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEI 552
Query: 516 ARPLTELMQEANQEVPAWLNRYASR 540
PL + +++ + +P WL ++ S+
Sbjct: 553 FTPLKKFLKKGGKRLPDWLYKHQSQ 577
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 157/445 (35%), Positives = 256/445 (57%)
Query: 118 EENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAI 176
EE T ++ + ED + T G+N+P + + E + + L I + Y +PT VQR +I
Sbjct: 140 EEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASI 199
Query: 177 PISIGGRDLMACAQTGSGKTAAFCFPIISGIMR--EQYVQRPRGSRTVYPLALILAPTRE 234
P+++ RD++ A+TGSGKT AF P+++ I+ E Y++ + S P+ LILAPTRE
Sbjct: 200 PLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNE--PVGLILAPTRE 257
Query: 235 LSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARV 293
L+ QI EA+KF + G +V+ GG + ++++ GV ++VATPGRLVD +ER V
Sbjct: 258 LALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIV 317
Query: 294 SLQMIRYLALDEADRMLDMGFEPQIRKIV------QQMDMPPPGM------RQTMLFSAT 341
L L +DEADRM+DMGFE + K++ +Q+ G R TM+F+AT
Sbjct: 318 DLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTAT 377
Query: 342 FPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH----ESDKRSHLMDLL--HAQ 395
+++L +L + +L +G G + D I Q EF+ E+ K + L+ ++ H +
Sbjct: 378 ISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWR 437
Query: 396 VANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 455
V + L ++F K D+L L N IHG ++Q RE A+ +F++ ++
Sbjct: 438 VT-----ENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFRNHES 492
Query: 456 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSL 515
+L+ATDVAARG+DIP+V V+N+ + D+Y+HRIGRTGRAG G + F ++ + +
Sbjct: 493 EVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEI 552
Query: 516 ARPLTELMQEANQEVPAWLNRYASR 540
PL + +++ + +P WL ++ S+
Sbjct: 553 FTPLKKFLKKGGKRLPDWLYKHQSQ 577
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 155/379 (40%), Positives = 220/379 (58%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ PT +Q P+ GRD++ A+TGSGKT AF P + ++ + Q+ + P
Sbjct: 93 FASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQK-----SCRP 147
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
LA++++PTREL+ QI+ + KF+ + ++V +GG ++Q RE + ++VATPGRL
Sbjct: 148 LAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ-REALKSAAVVVATPGRL 206
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
DL + L ++YL LDEADRMLD GFE I+ I+ M P RQT++F+AT+P
Sbjct: 207 KDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPM---PVSKRQTVMFTATWPP 263
Query: 345 EIQRLASDFLANYIFLAVGRVGSS----TDLIVQRVEFVHESDKRSHLMDLLHAQVANGV 400
++ LAS F+ + + + +G S+ I Q VE V +K L+ +L+ G
Sbjct: 264 IVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQILNRH-QRGT 322
Query: 401 HGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVA 460
K L F KK A +E L GF IHGD +QQER +L +FKSG +LVA
Sbjct: 323 PDK---VLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVA 379
Query: 461 TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLT 520
TDVAARGLDIPHV VVN P ++DYVHRIGRTGRAG G A F E + + + L
Sbjct: 380 TDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALI 439
Query: 521 ELMQEANQEVPAWLNRYAS 539
+++ ANQEVP L ++ S
Sbjct: 440 NVLKAANQEVPEALLKFGS 458
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 487 (176.5 bits), Expect = 9.2e-66, Sum P(2) = 9.2e-66
Identities = 118/325 (36%), Positives = 187/325 (57%)
Query: 96 DRREREVNPFGDDVGAE-QPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLG 153
D + E PF + E + ++ +N AY +++ ++ G++VP + + + L
Sbjct: 347 DHSKIEYEPFRKNFYIEVKDISRMTQDAVN--AYRKELELKVHGKDVPRPIQFWHQTGLT 404
Query: 154 EALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYV 213
+ +++ Y KP P+Q A+PI + GRD + A+TGSGKT F P++ I + V
Sbjct: 405 SKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPV 464
Query: 214 QRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERG 273
+ G P+ L++APTREL QI+ + +KFS G+ V YGG+ + QQ+ EL+RG
Sbjct: 465 EAGDG-----PIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRG 519
Query: 274 VDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
+I+V TPGR++D+L +++ L+ + YL +DEADRM DMGFEPQI +IVQ + P
Sbjct: 520 TEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNI-RPD- 577
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMD 390
RQT+LFSATFP++++ LA L + + VG I Q VE ES++ S L++
Sbjct: 578 --RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLE 635
Query: 391 LLHAQVANGVHGKQALTLVFVETKK 415
LL G ++ LVFV +++
Sbjct: 636 LL------GEWYEKGKVLVFVRSQE 654
Score = 219 (82.2 bits), Expect = 9.2e-66, Sum P(2) = 9.2e-66
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 441 QERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 500
+ +E ++ FKS +L+AT VAARGLD+ + VVNFD PN +DYVHR+GRTGRAG+
Sbjct: 651 RSQEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGR 710
Query: 501 SGLATAFFNENNMSLARPLTELMQEANQEVP 531
G A F +E++ A L + ++ + Q VP
Sbjct: 711 KGCAVTFISEDDAKYAPDLVKALELSEQPVP 741
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 157/378 (41%), Positives = 225/378 (59%)
Query: 165 YVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYP 224
+ PT +Q + PI +GG DL+ A TGSGKT AF P + I+ +RP T P
Sbjct: 130 FTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKII--SLPKRPSYGAT--P 185
Query: 225 LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 284
L L++APTREL+ QI K T ++ + AYGG Q R L GVDI++ TPGRL
Sbjct: 186 LVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRL 245
Query: 285 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPK 344
DLL + +S ++YL LDEADRMLDMGF PQI ++ Q+ P RQT++FSAT+PK
Sbjct: 246 NDLLRKHHLS--SVQYLVLDEADRMLDMGFMPQIESLIDQI----PKERQTLMFSATWPK 299
Query: 345 EIQRLASDFLANYIFLAVGRVGSSTDL-IVQRVEFVHE-SDKRSHLMDLLHAQVANGVHG 402
E++ LAS FL + I + VG + + + Q + + + SD +S DL++ ++ +
Sbjct: 300 EVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDLSDLQSD--DLIYDEINKILTA 357
Query: 403 KQALT-LVFVETKKGADALEHWLY-MNGFPATTIHGDRTQQERELALRSFKSGKTPILVA 460
T +VF K D +H+L + +H + Q+ RE L+ F+ + IL+A
Sbjct: 358 DPTNTVIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRMRESGLKLFRDHRIRILIA 417
Query: 461 TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLT 520
TDVAARGLDIP V V N+ LP +I+DYVHRIGRTGRAGK+G A ++ +L R L
Sbjct: 418 TDVAARGLDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAGKTGDAWSYVTTQTPNL-RDLV 476
Query: 521 ELMQEANQEVPAWLNRYA 538
+++Q NQ++P +L ++A
Sbjct: 477 KILQRTNQKIPDFLEKFA 494
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 155/421 (36%), Positives = 246/421 (58%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIR-RCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
++ G +VP + ++ + L L+ I + K+ KP+ +Q A+P + GRD++ A+T
Sbjct: 281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG 251
GSGKT ++ P++ I +Q+ + +G P+ LIL+PTREL+ QI E F+ +
Sbjct: 341 GSGKTLSYVLPMLRHIQDQQFSKDNQG-----PIGLILSPTRELALQIEKEILNFTKRNN 395
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEAD 307
++V YGG+ I Q+ EL++GV+I+V TPGR++DLL RV +L+ ++ LDEAD
Sbjct: 396 NLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEAD 455
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
RM D+GFEPQ+ KI+ Q+ P RQT+LFSATFP++++ LA L + + + VG +
Sbjct: 456 RMFDLGFEPQVNKILTQI-RPD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISV 511
Query: 368 STDLIVQRVEF----VHESDK-RSHLMDLLHAQVAN-GVHGKQALTLVFVETKKGADALE 421
I Q V E DK + ++ LH + N + + LVF E + AD L
Sbjct: 512 VAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELV 571
Query: 422 HWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI--LVATDVAARGLDIPHVAHVVNF 479
L N +PA IHG + Q +R+ A++ F S + I L+AT +AARGLD+ ++ V+NF
Sbjct: 572 ANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDVRNLGLVINF 631
Query: 480 DLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYAS 539
D PN ++DYVHR+GRTGRAG G A F + + L + ++ ++ ++ L A+
Sbjct: 632 DPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFNLVKALKLSHSDIDPKLEEIAN 691
Query: 540 R 540
+
Sbjct: 692 K 692
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 155/421 (36%), Positives = 246/421 (58%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIR-RCKYVKPTPVQRHAIPISIGGRDLMACAQT 191
++ G +VP + ++ + L L+ I + K+ KP+ +Q A+P + GRD++ A+T
Sbjct: 281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340
Query: 192 GSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG 251
GSGKT ++ P++ I +Q+ + +G P+ LIL+PTREL+ QI E F+ +
Sbjct: 341 GSGKTLSYVLPMLRHIQDQQFSKDNQG-----PIGLILSPTRELALQIEKEILNFTKRNN 395
Query: 252 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEAD 307
++V YGG+ I Q+ EL++GV+I+V TPGR++DLL RV +L+ ++ LDEAD
Sbjct: 396 NLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEAD 455
Query: 308 RMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGS 367
RM D+GFEPQ+ KI+ Q+ P RQT+LFSATFP++++ LA L + + + VG +
Sbjct: 456 RMFDLGFEPQVNKILTQI-RPD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISV 511
Query: 368 STDLIVQRVEF----VHESDK-RSHLMDLLHAQVAN-GVHGKQALTLVFVETKKGADALE 421
I Q V E DK + ++ LH + N + + LVF E + AD L
Sbjct: 512 VAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELV 571
Query: 422 HWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI--LVATDVAARGLDIPHVAHVVNF 479
L N +PA IHG + Q +R+ A++ F S + I L+AT +AARGLD+ ++ V+NF
Sbjct: 572 ANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDVRNLGLVINF 631
Query: 480 DLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYAS 539
D PN ++DYVHR+GRTGRAG G A F + + L + ++ ++ ++ L A+
Sbjct: 632 DPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFNLVKALKLSHSDIDPKLEEIAN 691
Query: 540 R 540
+
Sbjct: 692 K 692
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 160/395 (40%), Positives = 226/395 (57%)
Query: 150 IDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMR 209
I L L ++ C Y TP+Q+ AIP+ G DL+A AQTG+GKTAAF PI+ I +
Sbjct: 6 IGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAIAK 65
Query: 210 EQYVQRPRGSRTVYPLA------------LILAPTRELSSQIHVEAKKFSYQTGVKVVVA 257
+ + + T A LIL PTREL++Q+ K+FS +K V
Sbjct: 66 ANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVV 125
Query: 258 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 317
YGG + Q + L++G+D+LVATPGRL++ L V L +++L LDEADRMLDMGF
Sbjct: 126 YGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTD 185
Query: 318 IRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVE 377
I K++ + QT++FSATF ++ LA+ L + ++V + +++ I Q V
Sbjct: 186 IEKLL----LAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVY 241
Query: 378 FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGD 437
+V E KR L +L+ GV+ Q + LVF TK+ A+ L L ++G A HGD
Sbjct: 242 WVTEERKRELLSELI------GVNNWQQV-LVFAGTKESANTLAKELKLDGIKAALCHGD 294
Query: 438 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 497
+TQ R AL F GK +LVATDVAARGLDIP +A VVNF LP +DYVHR+GRTGR
Sbjct: 295 KTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGR 354
Query: 498 AGKSGLATAFFNENNMSLARPLTELMQEANQEVPA 532
AGKSG A + + + + +L++ + + A
Sbjct: 355 AGKSGTAISLVSPKDERFLENIEQLIERKFERIVA 389
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 158/379 (41%), Positives = 217/379 (57%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F ++ L EAL +R Y P+P+Q AIP I GRD+MA AQTG+GKTA F P++
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
+ + S V ALIL PTREL++QI + + + +V +GG IN Q
Sbjct: 68 LSSSK--GNKVSSNNVR--ALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQ 123
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ L +GVD+LVATPGRL+DL + V + LDEADRMLDMGF I+K++ +
Sbjct: 124 IARLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTAL- 182
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P RQ +LFSATF EI+ LA + N + ++V S+ + + Q + V DK+
Sbjct: 183 ---PKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAV---DKKR 236
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 446
L H N + +Q L VF +TK GA+ L L G A IHG+++Q R A
Sbjct: 237 KPAVLTHLIKEN--NWQQVL--VFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKA 292
Query: 447 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 506
L +FK G ILVATD+AARG+DI + VVNFDLPN +DYVHRIGRT RAG +G A +
Sbjct: 293 LAAFKDGSVKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALS 352
Query: 507 FFNENNMSLARPLTELMQE 525
+ + L + ++Q+
Sbjct: 353 LVCADELDLLWGIEHVIQQ 371
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 155/388 (39%), Positives = 225/388 (57%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
++ F L E++ + Y +PTP+Q+ IP I G DL+ AQTG+GKTAAF PI
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
I+ R + + + +R+ LIL PTREL+SQI +S G+K V YGG
Sbjct: 61 INKFGRNKIDIKAKSTRS-----LILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGR 115
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q+ +E G+DILVATPGRL+DL+E ++ + + LDEAD MLDMGF ++ I+
Sbjct: 116 QAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIIS 175
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
++ P RQT+LFSAT P EI+ LA L + + + + DL+ Q V + +S+
Sbjct: 176 KL----PKSRQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSN 231
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
K L ++L + K L+F +TK GAD + L A ++H +TQ R
Sbjct: 232 KVPLLFNIL----TKADYEK---VLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVR 284
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
E AL++FK +LVATDVAARG+D+ ++ V+N++LP D +Y+HRIGRT RAGKSG+
Sbjct: 285 EEALQNFKDSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGM 344
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVP 531
A +F EN++ R LT + Q +P
Sbjct: 345 AISFAVENDI---RQLTNIENSIGQVIP 369
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 150/412 (36%), Positives = 224/412 (54%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
DI V+ G VPP V TF L L LN+ Y PTP+Q AIP ++ G+ L+A A
Sbjct: 95 DIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASA 154
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
TGSGKTA+F PIIS + + P R PLA++LAPTREL Q+ +AK
Sbjct: 155 DTGSGKTASFLVPIISRCTT-YHSEHPSDQRR-NPLAMVLAPTRELCVQVEDQAKMLGKG 212
Query: 250 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 309
K + GG P++ QL +++GV++++ TPGR+VDLL + + L I LDE D M
Sbjct: 213 LPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCM 272
Query: 310 LDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST 369
L GF Q+ +I Q + P Q +LFSAT +E++++ I +++G
Sbjct: 273 LQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327
Query: 370 DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWL-YMNG 428
+ Q +V K+ L D+L +Q N H K +V+V ++ GAD L + + + G
Sbjct: 328 KAVNQLAIWVDAKQKKQKLFDILRSQ--N--HFKPP-AVVYVSSRVGADLLANAITVVTG 382
Query: 429 FPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 488
A +IHG++ +ER + SF G+ P+LV+T V RG+D+ V V+ FD+P+ I +Y
Sbjct: 383 VKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEY 442
Query: 489 VHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR 540
+H IGR R G+ G A F NE++ +L L ++ + +P L SR
Sbjct: 443 IHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSR 494
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 144/374 (38%), Positives = 217/374 (58%)
Query: 159 NIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 218
+I R VKPTP+Q A PI + G DL+ AQTG+GKT ++ P + + + R
Sbjct: 236 SIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRN 295
Query: 219 SRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 278
P L+L PTREL+ + E K+SY+ G+K + YGG N Q+ ++ +GVDI++
Sbjct: 296 G----PGMLVLTPTRELALHVEAECSKYSYK-GLKSICIYGGRNRNGQIEDISKGVDIII 350
Query: 279 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLF 338
ATPGRL DL V+L+ I YL +DEAD+MLDM FEPQIRKI+ +D+ P RQT++
Sbjct: 351 ATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKIL--LDVRPD--RQTVMT 406
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGS-STDLIVQRVEFVHESDKRSHLMDLLHAQVA 397
SAT+P +++LA +L + + + VG + + + + Q + E +KR+ + +
Sbjct: 407 SATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSP 466
Query: 398 NGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI 457
N ++FV K AD L + G A ++HG+ Q ++E A+ FKSG I
Sbjct: 467 NDK------VIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKI 520
Query: 458 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLAR 517
L+ TD+ +RGLD+ V HV N+D P +ID YVHR+G GR GK+G + + + +A
Sbjct: 521 LITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAG 580
Query: 518 PLTELMQEANQEVP 531
L +++ ANQ VP
Sbjct: 581 ELIKILDRANQSVP 594
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 148/367 (40%), Positives = 217/367 (59%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+ + L + I Y KPT +Q+ AIP+ + G+D++A AQTG+GKTA+F P++
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+ QY + + R ALIL PTREL+ Q+ +++ + + YGG +
Sbjct: 62 QL-NSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQE 120
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q + L GVDILVATPGRL+D+ + + + L LDEADRMLDMGF I KI++++
Sbjct: 121 QKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERL 180
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P RQ +LFSAT +E++ LA + + +++G +S I Q + V +++K
Sbjct: 181 ----PEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKS 236
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 445
+ L ++ Q + +QAL +F+ETK GA L L G A +IH R Q RE
Sbjct: 237 ALLSHIITTQ-----NWQQAL--IFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREK 289
Query: 446 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 505
L FKSGK LVAT +AARGLDI ++ V+N+DLP +DDY+HRIGRTGRAG SG A
Sbjct: 290 ILNDFKSGKIKFLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAI 349
Query: 506 AFFNENN 512
+ +++N
Sbjct: 350 SLVSKDN 356
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 147/380 (38%), Positives = 221/380 (58%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+ + L L + Y +PTP+Q AIP + +D+MA AQTG+GKTAAF PI+
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+M + Q ++ + AL+L PTREL+ Q+ K++ T ++V +AYGG I
Sbjct: 62 LLMADN--QSDHAAKAIR--ALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEA 117
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q G+D+L+ATPGRL+D L + ++L + L DEADRMLDMGF +I+ +++Q+
Sbjct: 118 QQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQV 177
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P RQT+LFSAT I + + L + + V + ++ I QRV + +SD++
Sbjct: 178 ----PAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRV-YAIDSDRK 232
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 445
+ + H + + +Q L +F TK+G D L L G + HGD +Q RE
Sbjct: 233 TEFVS--H--LVRSKNWQQVL--IFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREK 286
Query: 446 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 505
L+ FK G +LVATDVAARGLDI + +V+NF+LP +DY+HRIGRTGRAG +GLA
Sbjct: 287 VLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAI 346
Query: 506 AFFNENNMSLARPLTELMQE 525
F++ + L + L+ +
Sbjct: 347 TLFSQEDALLLEEVETLLDK 366
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 147/380 (38%), Positives = 221/380 (58%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F+ + L L + Y +PTP+Q AIP + +D+MA AQTG+GKTAAF PI+
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
+M + Q ++ + AL+L PTREL+ Q+ K++ T ++V +AYGG I
Sbjct: 62 LLMADN--QSDHAAKAIR--ALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEA 117
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q G+D+L+ATPGRL+D L + ++L + L DEADRMLDMGF +I+ +++Q+
Sbjct: 118 QQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQV 177
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P RQT+LFSAT I + + L + + V + ++ I QRV + +SD++
Sbjct: 178 ----PAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRV-YAIDSDRK 232
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 445
+ + H + + +Q L +F TK+G D L L G + HGD +Q RE
Sbjct: 233 TEFVS--H--LVRSKNWQQVL--IFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREK 286
Query: 446 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 505
L+ FK G +LVATDVAARGLDI + +V+NF+LP +DY+HRIGRTGRAG +GLA
Sbjct: 287 VLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAI 346
Query: 506 AFFNENNMSLARPLTELMQE 525
F++ + L + L+ +
Sbjct: 347 TLFSQEDALLLEEVETLLDK 366
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 146/369 (39%), Positives = 212/369 (57%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF E+ L L + +Y +PTP+Q AIP GRDL+A A TGSGKTA F P++
Sbjct: 9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFS--YQTGVKVVVAYGGAPI 263
+ RE + S+ + L+L PTREL+ Q+ K ++ + +K + +GG +
Sbjct: 69 KL-REDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSV 127
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
N Q+ L GVDILVATPGRL+DL+ + L ++ L LDEADRML +GF ++ ++
Sbjct: 128 NIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLA 187
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
P +QT+LFSATFP+++ L + L N I + + +ST +VQRV V++ +
Sbjct: 188 LT----PKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADAST--LVQRVFTVNKGE 241
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
K + L L+ + +QAL +FV K + L L G A HGD+ Q ER
Sbjct: 242 KTAVLAHLIQQE-----QWRQAL--IFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSER 294
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
L FK+G +L+ATD+AARGLDI + V+NF+LP DY+HRIGR+GRAG+ GL
Sbjct: 295 SRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGEVGL 354
Query: 504 ATAFFNENN 512
A + + +
Sbjct: 355 AISLIDHED 363
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 146/365 (40%), Positives = 214/365 (58%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
FA+++L E + + + TP+Q +P+S+GG+D+ AQTG+GKTAAF + +
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++R RG +P A+ILAPTREL QI +A+ G + YGG +Q
Sbjct: 63 LLRSG-----RGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQ 117
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
L+ G D++V TPGRL+D L++ SL+ I L +DEADRM DMGF +R I++++
Sbjct: 118 KNALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRL- 176
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
PP RQ ++FSAT + + LA +F+ +AV + + + Q + V +K
Sbjct: 177 -PPYDKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFP 235
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 446
L+ LL + G + T++FV TK+ A+ L+ L N FP I GD Q++R
Sbjct: 236 LLLGLLRKE------GMER-TMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKI 288
Query: 447 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 506
L FKSGK PI++ATDVA+RGL I V+HV+N+DLP D +DYVHRIGRT RAG G A +
Sbjct: 289 LEDFKSGKLPIMIATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAIS 348
Query: 507 FFNEN 511
+E+
Sbjct: 349 MADED 353
>UNIPROTKB|I3LRT7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
Length = 290
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 128/248 (51%), Positives = 177/248 (71%)
Query: 292 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLAS 351
++ L+ ++YL LDEADRMLDMGF P+++K++ MP RQT++FSATFP+EIQRLA
Sbjct: 1 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 60
Query: 352 DFL-ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVF 410
+FL +NY+F+AVG+VG + + Q + V + KR L+++L + G + T+VF
Sbjct: 61 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-NI-----GDER-TMVF 113
Query: 411 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 470
VETKK AD + +L T+IHGDR Q+ERE AL F+ GK P+LVAT VAARGLDI
Sbjct: 114 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 173
Query: 471 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEV 530
+V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+E++ LA+PL +++ +A Q+V
Sbjct: 174 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDESDSHLAQPLVKVLSDAQQDV 233
Query: 531 PAWLNRYA 538
PAWL A
Sbjct: 234 PAWLEEIA 241
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 154/361 (42%), Positives = 207/361 (57%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TFA+ L E + + Y PTP+QR AIP + G D+ AQTG+GKTAAF P+I
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMI- 63
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
Q + R +R P LIL PTREL++Q+ +K+ + + + GG +
Sbjct: 64 -----QRLSTGR-ARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKE 117
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q L+RGVD+L+ATPGRL+D +R ++ + + L +DEADRMLDMGF P I KI ++
Sbjct: 118 QETLLQRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKL 177
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD-- 383
P RQT+LFSATFP +IQRLA F + + V R + + I Q V + +D
Sbjct: 178 ----PANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGK 233
Query: 384 -KRSHLMDLLHA-QVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
+R+ L ++ A V NG+ VF K D + L +G A IHGD Q
Sbjct: 234 ARRTALRRVIEATNVKNGI--------VFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQS 285
Query: 442 ERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 501
R L+ F+ GK +LVA+DVAARGLDIP V HV NF P +DYVHRIGRTGRAG++
Sbjct: 286 VRSETLQRFRDGKLKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRT 345
Query: 502 G 502
G
Sbjct: 346 G 346
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 153/374 (40%), Positives = 209/374 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TFAE+ L + + C Y +PTPVQ A+P ++ DL+A AQTG+GKTAAF P +
Sbjct: 2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61
Query: 206 GIMREQYVQRP-RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN 264
+ Q P RG P L+L PTREL+ Q+ + + V+ GG P +
Sbjct: 62 RLSSPP--QGPGRG-----PRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYH 114
Query: 265 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
QLR L VD +VATPGRLVDLL+R + L + L LDEADRMLDMGF + +I
Sbjct: 115 AQLRLLSAPVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAA 174
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDK 384
P RQT+LF+AT + RLA L + + ++ + I QR+ H +D
Sbjct: 175 S----PATRQTLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRL---HVADD 227
Query: 385 RSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERE 444
H LL + + + ++F TK+ A+ L L G A +HGD Q R
Sbjct: 228 LHHKNRLLRHLITDESLRR---AIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARN 284
Query: 445 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 504
+ + K G+ +LVATDVAARGLD+ ++HV+NFDLP +DYVHRIGRTGRAG SG+A
Sbjct: 285 RTIAAMKQGRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIA 344
Query: 505 TAFFNENNMS-LAR 517
+F + N ++ LAR
Sbjct: 345 ISFASLNEVNYLAR 358
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 609 (219.4 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
Identities = 149/414 (35%), Positives = 226/414 (54%)
Query: 115 VAEEENTGINFDAYEDIPVETSGENVPPAVN---TFAEIDLGEALNLNIRRCKYVKPTPV 171
++EE + +++ ++ NV +++ L + L ++ + P+
Sbjct: 69 LSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPI 128
Query: 172 QRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMRE--QYVQRPRGSRTVYPLALIL 229
QR + ++ GRD++A A+TG+GKT AF PII + E Y R R P L+L
Sbjct: 129 QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRL--PKFLVL 186
Query: 230 APTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
APTREL+ Q+ E K+ + + V YGG Q L RGVD++V TPGR++DL+E
Sbjct: 187 APTRELAKQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIE 244
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
+ L + YL LDEAD+ML +GFE + I++ + P RQ+MLFSAT P +++L
Sbjct: 245 GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKL 300
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRVEF----VHESDKRSHLMDLLHAQVANGVHGKQA 405
A +L N L + VG + + + ++ + KR+ L DL+ V+ K
Sbjct: 301 ARKYLDNP--LNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT------VYAKGG 352
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 465
T+VF +TK+ AD + L N +HGD +Q +RE L +F+ GK +LVATDVA+
Sbjct: 353 KTIVFTQTKRDADEVSLAL-SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVAS 411
Query: 466 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPL 519
RGLDIP+V V++++LPND + +VHR GRTGRAGK G A + R L
Sbjct: 412 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSL 465
Score = 41 (19.5 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 563 RDGSFTRGTSNDYYSG 578
R GS +RG+S+D+ G
Sbjct: 694 RGGSSSRGSSDDWLIG 709
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 150/365 (41%), Positives = 214/365 (58%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F+E++L + I Y PTP+Q AIP ++ GRD++ AQTG+GKTA+F P+I+
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITL 63
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTGVKVVVAY--GGAPI 263
+ R + +R P +L+L PTREL++Q+ A+ F +Y +K+ A GG
Sbjct: 64 LARGR-------ARARMPRSLVLCPTRELAAQV---AENFDTYTKHLKLTKALLIGGVSF 113
Query: 264 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
+Q ++RGVD+L+ATPGRL+D ER ++ L ++ + +DEADRMLDMGF P I +I
Sbjct: 114 KEQDALIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFS 173
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHES- 382
P RQT+ FSAT EI+R+ + FL+ + V R ++++ I Q V S
Sbjct: 174 LT----PFTRQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSR 229
Query: 383 -DKR-SHLMDLLHAQV-ANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 439
D+ S +L A + A G A+ +F K D + L G+ A IHGD
Sbjct: 230 RDREASEKRAVLRALIDAEGEKCTNAI--IFCNRKTDVDIVAKSLQKYGYDAAPIHGDLD 287
Query: 440 QQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG 499
Q +R L F+ GK +LVA+DVAARGLD+P V+HV NFD+P +DYVHRIGRTGRAG
Sbjct: 288 QSQRTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAG 347
Query: 500 KSGLA 504
+ G A
Sbjct: 348 RDGKA 352
>WB|WBGene00001601 [details] [associations]
symbol:glh-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
InParanoid:O76743 NextBio:873335 Uniprot:O76743
Length = 1156
Score = 629 (226.5 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 164/448 (36%), Positives = 247/448 (55%)
Query: 107 DDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYV 166
DD E V ++ I+FD + + T +P + L + L+ N++R K
Sbjct: 702 DDKMFEDAVNNDDK--IDFD--QKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMN 757
Query: 167 KPTPVQRHAI-PISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPL 225
+PTP+QR + PI + G D++ACA TGSGKT AF P + +M E R P
Sbjct: 758 RPTPIQRASFFPI-MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPR 816
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN---QQLRELERGVDILVATPG 282
LI+APTREL +Q A++ +Y+TG+K +A+GG N Q LR + ++ILVAT G
Sbjct: 817 LLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQ-LNILVATMG 875
Query: 283 RLVDLLERARVSLQMIRYLALDEADRMLDMG-FEPQIRKIVQQMDMPPPGMRQTMLFSAT 341
RL D + VSL ++Y+ LDEADRM+D F ++ KI+ P +QT+LFSA+
Sbjct: 876 RLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS---PGERTQQTVLFSAS 932
Query: 342 FPKEIQR--LASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQ---- 395
F +++Q L Y L V + G++ + I Q++ V ++KR + LL
Sbjct: 933 FSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLLGIDENTV 992
Query: 396 --VANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSG 453
+ + KQ TL+FV + K D L + G ++H + Q++R+ L F+ G
Sbjct: 993 TLLPDAPIEKQK-TLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRG 1051
Query: 454 KTPILVATDVAARGLDIPHVAHVVNFDLP--NDIDDYVHRIGRTGRAGKSGLATAFFN-E 510
K +VA++V ARGL+I + HVVN+D+P N D+YV+RIGRTGRAG +G +TAF + E
Sbjct: 1052 KYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVE 1111
Query: 511 NNMSLARPLTELMQEANQEVPAWLNRYA 538
N+ + L ++ EA +EVP WL A
Sbjct: 1112 NDTDIIPCLVSILNEAKKEVPEWLTEGA 1139
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 632 (227.5 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 143/391 (36%), Positives = 222/391 (56%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+N P V F + L + + + + K +Q IP + GRD++A A+TGSGKT
Sbjct: 715 GKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKT 774
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
++ FP+I ++ ++ ++ G P+++IL PTRELS Q+ EAK + ++++
Sbjct: 775 LSYLFPVIRHVLHQEPLRNNDG-----PISIILTPTRELSIQVKNEAKIYCKAVNIEILA 829
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMG 313
YGG+ I +QL+ L++GV+ILV TPGR++D+L +V+ L + ++ LDEADR+LD+G
Sbjct: 830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889
Query: 314 FEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIV 373
FE QI I++ +QT + SATFP IQ +A L I + VG G + + I
Sbjct: 890 FESQIYNILRNCRKD----KQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIY 945
Query: 374 QRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATT 433
Q VE + ES K L+ LL + K L L+FV + AD L LY +
Sbjct: 946 QFVEIIEESKKVFRLLKLLGEWI------KYGLVLIFVNKQIEADLLYLELYKYDYNLLV 999
Query: 434 IHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG 493
+HG + Q +R+ L FK + +L+AT V ARG+DI ++ V+N+ P+ I+DY+HRIG
Sbjct: 1000 LHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIG 1059
Query: 494 RTGRAGKSGLATAFFNENNMSLARPLTELMQ 524
RTGR+ G A F N + A + L++
Sbjct: 1060 RTGRSNNIGYAYTFILPNEYTKAYDIYNLLK 1090
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 632 (227.5 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 143/391 (36%), Positives = 222/391 (56%)
Query: 137 GENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKT 196
G+N P V F + L + + + + K +Q IP + GRD++A A+TGSGKT
Sbjct: 715 GKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKT 774
Query: 197 AAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVV 256
++ FP+I ++ ++ ++ G P+++IL PTRELS Q+ EAK + ++++
Sbjct: 775 LSYLFPVIRHVLHQEPLRNNDG-----PISIILTPTRELSIQVKNEAKIYCKAVNIEILA 829
Query: 257 AYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMG 313
YGG+ I +QL+ L++GV+ILV TPGR++D+L +V+ L + ++ LDEADR+LD+G
Sbjct: 830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889
Query: 314 FEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIV 373
FE QI I++ +QT + SATFP IQ +A L I + VG G + + I
Sbjct: 890 FESQIYNILRNCRKD----KQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIY 945
Query: 374 QRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATT 433
Q VE + ES K L+ LL + K L L+FV + AD L LY +
Sbjct: 946 QFVEIIEESKKVFRLLKLLGEWI------KYGLVLIFVNKQIEADLLYLELYKYDYNLLV 999
Query: 434 IHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG 493
+HG + Q +R+ L FK + +L+AT V ARG+DI ++ V+N+ P+ I+DY+HRIG
Sbjct: 1000 LHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIG 1059
Query: 494 RTGRAGKSGLATAFFNENNMSLARPLTELMQ 524
RTGR+ G A F N + A + L++
Sbjct: 1060 RTGRSNNIGYAYTFILPNEYTKAYDIYNLLK 1090
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 401 (146.2 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 91/229 (39%), Positives = 130/229 (56%)
Query: 98 REREVNPFGDDVGAEQPVAEEENTGINFDAY-EDIPVETSGENVPPAVNTFAEIDLGEAL 156
R++E DD Q +E T ++ + ED + T G +P + ++ + L +
Sbjct: 344 RKKEAKQRWDDRHWSQKKLDEM-TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHI 402
Query: 157 NLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP 216
I +C Y +PTP+QR AIPI + RD++ A+TGSGKTAAF P++ I + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 217 RGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDI 276
S P A+ILAPTREL+ QI E KF G++ V GG Q L G +I
Sbjct: 463 EESDQG-PYAIILAPTRELAQQIEEETIKFGKPLGIRPVAVIGGISREDQGFRLRMGCEI 521
Query: 277 LVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M
Sbjct: 522 VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHM 570
Score = 253 (94.1 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 48/102 (47%), Positives = 71/102 (69%)
Query: 425 YMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPND 484
+ + A T+HG + Q++RE AL + K+G ILVATDVA RG+DI V+ VVN+D+ +
Sbjct: 666 FFQQYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKN 725
Query: 485 IDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEA 526
I+DY+HRIGRTGRAGKSG+A F + + ++ L + + E+
Sbjct: 726 IEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 767
Score = 50 (22.7 bits), Expect = 3.8e-39, Sum P(2) = 3.8e-39
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 355 ANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETK 414
A I +A G D +Q V V D ++ D +H G GK + + F+ TK
Sbjct: 695 AKDILVATDVAGRGID--IQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFL-TK 751
Query: 415 K 415
+
Sbjct: 752 E 752
Score = 42 (19.8 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYED 130
+R ERE N D+ G Q + EE++ A ++
Sbjct: 219 ERMERETNGNEDEEG-RQKIREEKDKSKELHAIKE 252
Score = 41 (19.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 28 PTRSTY-VPPHLRNKPPTSSEPPASSRESTEPA 59
P ST +P L + P SS P+S S P+
Sbjct: 604 PCLSTPPIPTRLLSLPSLSSAHPSSPPSSPSPS 636
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 144/369 (39%), Positives = 206/369 (55%)
Query: 143 AVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFP 202
+V +FAE+ + L + YV PTPVQ IP + GRD++A A TGSGKTAAF P
Sbjct: 7 SVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALP 66
Query: 203 IISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG-VKVVVAYGG 260
++ + + + G L+L PTREL+ Q+ + S+ G +K+V A+GG
Sbjct: 67 LLQRLSEAKSADKSAG----VVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGG 122
Query: 261 APINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRK 320
+N Q++ L G D+LVATPGRL+DLL + L + LDEADRML +GF ++ +
Sbjct: 123 VSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQ 182
Query: 321 IVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH 380
++ + P +QT+LFSATFP+E++ L + L + + ST I QRV V+
Sbjct: 183 VLAAL----PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST--IEQRVITVN 236
Query: 381 ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
K + L L+ QAL +FV K + L L G A HGD+ Q
Sbjct: 237 REQKTALLAHLIKQH-----QWSQAL--IFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQ 289
Query: 441 QERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 500
R L FK+G+ +L+ATD+AARG+DI + V+NFDLP DY+HRIGR+GRAG+
Sbjct: 290 GARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGE 349
Query: 501 SGLATAFFN 509
+GLA +
Sbjct: 350 AGLAVTLIS 358
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 144/369 (39%), Positives = 206/369 (55%)
Query: 143 AVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFP 202
+V +FAE+ + L + YV PTPVQ IP + GRD++A A TGSGKTAAF P
Sbjct: 7 SVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALP 66
Query: 203 IISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG-VKVVVAYGG 260
++ + + + G L+L PTREL+ Q+ + S+ G +K+V A+GG
Sbjct: 67 LLQRLSEAKSADKSAG----VVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGG 122
Query: 261 APINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRK 320
+N Q++ L G D+LVATPGRL+DLL + L + LDEADRML +GF ++ +
Sbjct: 123 VSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQ 182
Query: 321 IVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH 380
++ + P +QT+LFSATFP+E++ L + L + + ST I QRV V+
Sbjct: 183 VLAAL----PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST--IEQRVITVN 236
Query: 381 ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
K + L L+ QAL +FV K + L L G A HGD+ Q
Sbjct: 237 REQKTALLAHLIKQH-----QWSQAL--IFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQ 289
Query: 441 QERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 500
R L FK+G+ +L+ATD+AARG+DI + V+NFDLP DY+HRIGR+GRAG+
Sbjct: 290 GARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGE 349
Query: 501 SGLATAFFN 509
+GLA +
Sbjct: 350 AGLAVTLIS 358
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 146/412 (35%), Positives = 229/412 (55%)
Query: 170 PVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALIL 229
P+Q+ + ++ GRD++ A+TG+GKT AF PII I++ + RG PL L+L
Sbjct: 129 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYN-AKHGRGRN---PLCLVL 184
Query: 230 APTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
APTREL+ Q+ E ++ + + + YGG PI QQ+R+L+ GVD+ V TPGR++DL++
Sbjct: 185 APTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMK 242
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R ++L ++++ LDEAD+ML +GF + I++++ P RQ+M+FSAT P I+ L
Sbjct: 243 RGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL----PEKRQSMMFSATMPSWIRSL 298
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRV---EFVHESDKRSHLMDLLHAQVANGVHGKQAL 406
+L N L V VG S + + + +S R+ ++ L + A G GK
Sbjct: 299 TKKYLNNP--LTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKG--GK--- 351
Query: 407 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 466
+VF +TK+ AD L + L F +HGD +Q +RE L F+ G ILVATDVAAR
Sbjct: 352 CIVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAAR 410
Query: 467 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEA 526
GLD+P+V +++++LPN+ + +VHR GRTGRAGK G A ++++ + + +
Sbjct: 411 GLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSR 470
Query: 527 NQEVPAWLNRYASRANYXXXXXXXXXXXXXXARDFRRDGSFTRGTSNDYYSG 578
E+P+ S + + RD R SF + Y G
Sbjct: 471 FTELPSIAVERGSASMFEGIGSRSGGSFGGGMRD--RGSSFGGRSGGGGYGG 520
>MGI|MGI:2182303 [details] [associations]
symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
CleanEx:MM_DDX50 Genevestigator:Q99MJ9
GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
Length = 734
Score = 556 (200.8 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
Identities = 142/402 (35%), Positives = 221/402 (54%)
Query: 115 VAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNL-NIRRCKYVKPTPVQR 173
V+ EN+ + D E+ E A + F+ + E + L R Y+ P V+
Sbjct: 110 VSSSENSHKSSDKAEETLTREQKEG---AFSNFSISE--ETIKLLKGRGVTYLFPIQVKT 164
Query: 174 HAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTR 233
P+ G+DL+A A+TG+GKT +F P+I + R Q + + SR+ P L+LAPTR
Sbjct: 165 FG-PV-YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ--ETIKKSRS--PKVLVLAPTR 218
Query: 234 ELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARV 293
EL++Q+ + K + + + V YGG Q+ ++ G+DILV TPGR+ D L+ R+
Sbjct: 219 ELANQVAKDFKDITRK--LSVACFYGGTSYQSQINQIRNGIDILVGTPGRIKDHLQSGRL 276
Query: 294 SLQMIRYLALDEADRMLDMGFEPQIRKIVQQM-DMPPPGMRQTMLFSATFPKEIQRLASD 352
L +R++ LDE D+MLD+GF Q+ I+ + QT+LFSAT P+ + ++A
Sbjct: 277 DLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKK 336
Query: 353 FLANYIFLAVGRVGSSTDLIVQRVEFV----HESDKRSHLMDLLHAQVANGVHGKQALTL 408
++ + + V VG T VE + H S + + + D+L QV +G G+ +
Sbjct: 337 YMKSR-YEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL--QVYSGSEGR---AI 390
Query: 409 VFVETKKGAD--ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 466
+F ETKK A+ + N A +HGD Q +RE+ L+ F+ G +LVAT+VAAR
Sbjct: 391 IFCETKKNVTEMAMNPHIKQN---AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAAR 447
Query: 467 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF 508
GLDIP V V+ P D++ Y+HR GRTGRAG++G+ F+
Sbjct: 448 GLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICVCFY 489
Score = 42 (19.8 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 493 GRTGRAGKSG 502
GR+GR+G+SG
Sbjct: 682 GRSGRSGRSG 691
Score = 39 (18.8 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDI 131
+R E N DD+ A +P + +N D E +
Sbjct: 43 ERTETRENGVTDDLDAPKPKKAKMREKLNGDTKEGL 78
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 134/363 (36%), Positives = 208/363 (57%)
Query: 170 PVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALIL 229
P+Q+ + ++ GRD++ A+TG+GKT AF PII I++ + RG P L+L
Sbjct: 141 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFN-AKHGRGKN---PQCLVL 196
Query: 230 APTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 289
APTREL+ Q+ E ++ + + + YGG PI QQ+REL G+D+ V TPGR++DL++
Sbjct: 197 APTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMK 254
Query: 290 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRL 349
R ++L ++++ LDEAD+ML +GF + I+Q++ P RQ+M+FSAT P I+ L
Sbjct: 255 RGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL----PAKRQSMMFSATMPSWIRSL 310
Query: 350 ASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLV 409
+L N L + VG S + + + ++ V HGK +V
Sbjct: 311 TKKYLNNP--LTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE--HGKGGKCIV 366
Query: 410 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 469
F +TK+ AD L L + +HGD +Q +RE L F+ G ILVATDVAARGLD
Sbjct: 367 FTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLD 425
Query: 470 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQE 529
+P+V V++++LPN+ + +VHR GRTGRAGK G A ++ + + + + E
Sbjct: 426 VPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNE 485
Query: 530 VPA 532
+P+
Sbjct: 486 LPS 488
>UNIPROTKB|F1SUG8 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
Length = 737
Score = 552 (199.4 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 132/355 (37%), Positives = 202/355 (56%)
Query: 161 RRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSR 220
R Y+ P V+ P+ G+DL+A A+TG+GKT +F P+I + R Q + + SR
Sbjct: 155 RGVTYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ--ETIKKSR 210
Query: 221 TVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVAT 280
+ P L+LAPTREL++Q+ + K + + + V YGG Q+ + G+DILV T
Sbjct: 211 S--PKVLVLAPTRELANQVAKDFKDITKK--LSVACFYGGTSYQSQINHIRNGIDILVGT 266
Query: 281 PGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM-DMPPPGMRQTMLFS 339
PGR+ D L+ R+ L +R++ LDE D+MLD+GF Q+ I+ + QT+LFS
Sbjct: 267 PGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFS 326
Query: 340 ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV----HESDKRSHLMDLLHAQ 395
AT P+ + ++A ++ + + V VG T VE + H S + + + D+L Q
Sbjct: 327 ATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL--Q 383
Query: 396 VANGVHGKQALTLVFVETKKGAD--ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSG 453
V +G G+ ++F ETKK A+ + N A +HGD Q +RE+ L+ F+ G
Sbjct: 384 VYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGDIAQSQREITLKGFREG 437
Query: 454 KTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF 508
+LVAT+VAARGLDIP V V+ P D++ Y+HR GRTGRAG++G+ F+
Sbjct: 438 SFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFY 492
Score = 42 (19.8 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 493 GRTGRAGKSG 502
GR+GR+G+SG
Sbjct: 685 GRSGRSGRSG 694
Score = 37 (18.1 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYE 129
++ E N DD+ A +P + +N D E
Sbjct: 43 EKSETRENGVADDLDAPKPKKAKVKEKLNGDTEE 76
>SGD|S000002651 [details] [associations]
symbol:PRP28 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
"U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
Uniprot:P23394
Length = 588
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 150/414 (36%), Positives = 235/414 (56%)
Query: 129 EDIPVETSGENVPPAVNTFAEIDL--GEALNLNIRRCKYVKPTPVQRHAIPISIGG---R 183
ED + T G V + + E+++ + L + I+ ++ PTP+QR IP R
Sbjct: 156 EDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYR 215
Query: 184 DLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVY-PLALILAPTRELSSQIHVE 242
D + A TGSGKT AF PI+ + R RP + + P ALILAPTREL QI E
Sbjct: 216 DFLGVASTGSGKTLAFVIPILIKMSRSP--PRPPSLKIIDGPKALILAPTRELVQQIQKE 273
Query: 243 AKK----FSYQTGV--KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 296
+K +S ++ KV+ GG + + L G DILVATPGRL+D LE + ++
Sbjct: 274 TQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMK 333
Query: 297 MIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGM--RQTMLFSATFPKEIQRLASDFL 354
+ L LDEAD+M+D+GFE Q+ I+ ++D+ RQT++F+AT I+++A+ ++
Sbjct: 334 QVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYM 393
Query: 355 ANYIFLAVGRVGSSTDLIVQRVEFV-HESDKRSHLMDLLHAQVANGVHGKQALTLVFVET 413
++ +G S LI Q VE+ ++ DK L ++ A+ + ++F+
Sbjct: 394 QKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIV-AKYDPPI-------IIFINY 445
Query: 414 KKGADAL-EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPH 472
K+ AD L E + T +HG ++Q++RE +L+ F++ K I++AT+VAARGLDIP+
Sbjct: 446 KQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPN 505
Query: 473 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE-NNMSLARPLTELMQE 525
V+ VVNF + +DDY+HRIGRTGRA G A +F + + SL R L + +++
Sbjct: 506 VSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRK 559
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 148/389 (38%), Positives = 215/389 (55%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF +++L L I + +PTP+Q+ +P+ + G+D+ ACA TG+GKTAAF P++
Sbjct: 202 TFHDMNLSRPLLKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFMLPVL- 260
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
E+ + +PR T L+L PTREL Q+H A++ + T + +A GG +
Sbjct: 261 ----ERLIYKPR--ETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKS 314
Query: 266 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
Q L G D+L+ATPGRL+D L L I L LDEADRMLD FE Q+++I++
Sbjct: 315 QEAALRAGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEIIRM 374
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQ-RVEFVHESD 383
RQTMLFSAT +E++ LAS L + + V S+TD+ R EFV
Sbjct: 375 CAY----QRQTMLFSATMSEEVKDLASVSLKQPVRIFVN---SNTDVAPYLRQEFVRIRP 427
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
+ + + A + Q ++F +TKK A + L + G +HG+ +Q +R
Sbjct: 428 NKEGDREAIVAALLTRTF--QDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQR 485
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
+LR FK + ILVATDVAARGLDI V V+NF +PN + YVHR+GRT RAGK G
Sbjct: 486 LESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGR 545
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E + L E++++A V A
Sbjct: 546 SVSLVGETERKM---LKEIVKKAKFPVKA 571
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 143/381 (37%), Positives = 208/381 (54%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F + DL L +I + Y KPT +Q IP ++ G+D++A A TG+GKTAAF PI
Sbjct: 15 FEQFDLDSELLASINKIGYTKPTSIQELVIPQAMVGKDVLASAPTGTGKTAAFLLPIAQH 74
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++ Y PR ++ +P LIL PTREL+ QI ++++ + T +K V GG
Sbjct: 75 LL--DY---PR-TKPGFPRVLILTPTRELAIQIGEDSEQLTELTKIKTGVITGGVNYGSH 128
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
L DILVATPGRL++ +E + + I L LDEADRMLD+GF I +IV +
Sbjct: 129 ADILTSTTDILVATPGRLLEYIENEQFDAREIEILVLDEADRMLDLGFSETINRIVAEAR 188
Query: 327 MPPPGMRQTMLFSATFPKE-IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
+QTMLFSAT +Q A + L +FL + ++ +++H +D
Sbjct: 189 W----RKQTMLFSATLESPGVQLFAEEVLNEPVFLE-SKPSRKEKAVIH--QWLHLADDA 241
Query: 386 SHLMDLL-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERE 444
+H ++LL + GV T+VF ++ L LY P + G Q +R
Sbjct: 242 NHKLNLLVNTLKQEGVER----TVVFANKRETVQYLSGKLYAEELPCVWLEGKMPQDKRN 297
Query: 445 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 504
A+ FK G+ +LVATDVAARGLDI ++HV+NFD+P +D Y+HRIGRTGRAGK G A
Sbjct: 298 KAIERFKKGEVKVLVATDVAARGLDIDDISHVINFDMPRKVDIYIHRIGRTGRAGKKGTA 357
Query: 505 TAFFNENNMSLARPLTELMQE 525
+ ++M + + +E
Sbjct: 358 ISLVEAHDMGVIGKIERYTKE 378
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 153/433 (35%), Positives = 236/433 (54%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINF-DAYEDIPVETSGENV--------PPAVNT 146
D E ++ FG ++ EEE + + E + E S E + P +T
Sbjct: 71 DDEELALDGFGMGASKQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHT 130
Query: 147 -FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
F + L + I K+ KPTP+Q +IPI++ G+D++A AQTGSGKT A+ PII
Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII- 189
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG-VKVVVAYGGAPIN 264
E+ + +P S V +IL PTREL+ Q++ KK S+ + + +A GG +
Sbjct: 190 ----ERLLYKPSTSTKV----IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLR 241
Query: 265 QQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
QQ +L+ DI++ATPGRL+D + + S+Q I+ L +DEADRML+ GF+ ++ +I
Sbjct: 242 QQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEI-- 299
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ + P RQT+LFSAT IQ L L + + + S ++Q +FV
Sbjct: 300 -LSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQ--QFVRIR- 355
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
KR L L Q+ GV + +VFV K+ A L L + G + +HG TQ++R
Sbjct: 356 KRDQLKPALLYQLLKGVSSR---VVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQR 412
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
+++FKS + P+L+ TD+AARGLDIP + V+N+D+P + Y+HR+GRT RAG+ G
Sbjct: 413 LQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTARAGRDGT 472
Query: 504 ATAFFNENNMSLA 516
+ F E++ A
Sbjct: 473 SITFVGESSQERA 485
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 153/433 (35%), Positives = 236/433 (54%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINF-DAYEDIPVETSGENV--------PPAVNT 146
D E ++ FG ++ EEE + + E + E S E + P +T
Sbjct: 71 DDEELALDGFGMGASKQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHT 130
Query: 147 -FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
F + L + I K+ KPTP+Q +IPI++ G+D++A AQTGSGKT A+ PII
Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII- 189
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTG-VKVVVAYGGAPIN 264
E+ + +P S V +IL PTREL+ Q++ KK S+ + + +A GG +
Sbjct: 190 ----ERLLYKPSTSTKV----IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLR 241
Query: 265 QQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
QQ +L+ DI++ATPGRL+D + + S+Q I+ L +DEADRML+ GF+ ++ +I
Sbjct: 242 QQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEI-- 299
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESD 383
+ + P RQT+LFSAT IQ L L + + + S ++Q +FV
Sbjct: 300 -LSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQ--QFVRIR- 355
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
KR L L Q+ GV + +VFV K+ A L L + G + +HG TQ++R
Sbjct: 356 KRDQLKPALLYQLLKGVSSR---VVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQR 412
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
+++FKS + P+L+ TD+AARGLDIP + V+N+D+P + Y+HR+GRT RAG+ G
Sbjct: 413 LQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTARAGRDGT 472
Query: 504 ATAFFNENNMSLA 516
+ F E++ A
Sbjct: 473 SITFVGESSQERA 485
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 149/389 (38%), Positives = 211/389 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F +++L L I + +PTP+Q+ IP+ + G+D+ ACA TG+GKTAAF P++
Sbjct: 188 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 246
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
E+ + +PR S L+L PTREL Q+H K+ + + +A GG +
Sbjct: 247 ----ERLIYKPRQSPVTR--VLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKS 300
Query: 266 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
Q L DIL+ATPGRL+D L L I L LDEADRMLD FE Q+++I++
Sbjct: 301 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 360
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI-VQRVEFVHESD 383
RQTMLFSAT E++ LAS L N + + V S+TD+ R EFV
Sbjct: 361 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFVRIRP 413
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R + + A + + +F +TKK A + L + G +HG+ +Q +R
Sbjct: 414 NREGDREAIVAALLTRTFTDHVM--LFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 471
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
ALR FK + ILVATDVAARGLDI V V+NF +PN I YVHR+GRT RAG++G
Sbjct: 472 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 531
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E + L E+++ A V A
Sbjct: 532 SVSLVGEEERKM---LKEIVKAAKAPVKA 557
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 149/389 (38%), Positives = 211/389 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F +++L L I + +PTP+Q+ IP+ + G+D+ ACA TG+GKTAAF P++
Sbjct: 209 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 267
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
E+ + +PR S L+L PTREL Q+H K+ + + +A GG +
Sbjct: 268 ----ERLIYKPRQSPVTR--VLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKS 321
Query: 266 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
Q L DIL+ATPGRL+D L L I L LDEADRMLD FE Q+++I++
Sbjct: 322 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 381
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI-VQRVEFVHESD 383
RQTMLFSAT E++ LAS L N + + V S+TD+ R EFV
Sbjct: 382 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFVRIRP 434
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R + + A + + +F +TKK A + L + G +HG+ +Q +R
Sbjct: 435 NREGDREAIVAALLTRTFTDHVM--LFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 492
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
ALR FK + ILVATDVAARGLDI V V+NF +PN I YVHR+GRT RAG++G
Sbjct: 493 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 552
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E + L E+++ A V A
Sbjct: 553 SVSLVGEEERKM---LKEIVKAAKAPVKA 578
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 155/405 (38%), Positives = 224/405 (55%)
Query: 131 IP-VETSGENVPPAVNTFAEIDLGEALNLNI-RRCKYVKPTPVQRHAIPISIGGRDLMAC 188
IP + S E+ P ++ TFAE+ L AL + R K+ PT VQ+ AIP + GRDL+A
Sbjct: 3 IPKLSPSPESYPESL-TFAELGLNAALRKALPTRLKH--PTRVQQLAIPAILAGRDLLAL 59
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGS-RTVYPLALILAPTRELSSQI----HVEA 243
+QTGSGKT AF P++ + ++ VQ S PLAL+L PTREL+ Q+ H A
Sbjct: 60 SQTGSGKTFAFGLPLLQILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALA 119
Query: 244 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLAL 303
+ S + + + GG + QQL +L ++VATPGRL+DL ++ +SL I++L L
Sbjct: 120 SQLSTSAPLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVL 179
Query: 304 DEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVG 363
DEADR+L+MGF P ++K++ M P +QT+LFSAT P+ + LA L N
Sbjct: 180 DEADRLLEMGFWPDMQKLMAMM----PKRKQTLLFSATLPEALDSLAGKLLTNDPL---- 231
Query: 364 RVGSST-DLIVQRVE----FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+V +ST + +V +E V++ K L+ LL + LVF+ + AD
Sbjct: 232 KVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLKQY-------QWPQVLVFISARDDAD 284
Query: 419 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 478
A+ L G A +HG++ Q R L FK+ + +LVATD+ ARG+ + + V+N
Sbjct: 285 AIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVATDLMARGIHVDALPVVIN 344
Query: 479 FDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEN---NMSLARPLT 520
DLP YVHRIGRT RAG GLA + N++ R LT
Sbjct: 345 LDLPTSAPVYVHRIGRTARAGAKGLAISLVCHGEMPNLTAIRNLT 389
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 155/405 (38%), Positives = 224/405 (55%)
Query: 131 IP-VETSGENVPPAVNTFAEIDLGEALNLNI-RRCKYVKPTPVQRHAIPISIGGRDLMAC 188
IP + S E+ P ++ TFAE+ L AL + R K+ PT VQ+ AIP + GRDL+A
Sbjct: 3 IPKLSPSPESYPESL-TFAELGLNAALRKALPTRLKH--PTRVQQLAIPAILAGRDLLAL 59
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRPRGS-RTVYPLALILAPTRELSSQI----HVEA 243
+QTGSGKT AF P++ + ++ VQ S PLAL+L PTREL+ Q+ H A
Sbjct: 60 SQTGSGKTFAFGLPLLQILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALA 119
Query: 244 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLAL 303
+ S + + + GG + QQL +L ++VATPGRL+DL ++ +SL I++L L
Sbjct: 120 SQLSTSAPLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVL 179
Query: 304 DEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVG 363
DEADR+L+MGF P ++K++ M P +QT+LFSAT P+ + LA L N
Sbjct: 180 DEADRLLEMGFWPDMQKLMAMM----PKRKQTLLFSATLPEALDSLAGKLLTNDPL---- 231
Query: 364 RVGSST-DLIVQRVE----FVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGAD 418
+V +ST + +V +E V++ K L+ LL + LVF+ + AD
Sbjct: 232 KVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLKQY-------QWPQVLVFISARDDAD 284
Query: 419 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 478
A+ L G A +HG++ Q R L FK+ + +LVATD+ ARG+ + + V+N
Sbjct: 285 AIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVATDLMARGIHVDALPVVIN 344
Query: 479 FDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEN---NMSLARPLT 520
DLP YVHRIGRT RAG GLA + N++ R LT
Sbjct: 345 LDLPTSAPVYVHRIGRTARAGAKGLAISLVCHGEMPNLTAIRNLT 389
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 147/389 (37%), Positives = 211/389 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F +++L L I + +PTP+Q+ IP+ + G+D+ ACA TG+GKTAAF P++
Sbjct: 188 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 246
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
E+ + +PR + L+L PTREL Q+H K+ + + +A GG +
Sbjct: 247 ----ERLIYKPRQAPVTR--VLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKS 300
Query: 266 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
Q L DIL+ATPGRL+D L L I L LDEADRMLD FE Q+++I++
Sbjct: 301 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 360
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI-VQRVEFVHESD 383
RQTMLFSAT E++ LAS L N + + V S+TD+ R EF+
Sbjct: 361 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFIRIRP 413
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R + + A + + +F +TKK A + L + G +HG+ +Q +R
Sbjct: 414 NREGDREAIVAALLMRTFTDHVM--LFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 471
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
ALR FK + ILVATDVAARGLDI V V+NF +PN I YVHR+GRT RAG++G
Sbjct: 472 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 531
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E + L E+++ A V A
Sbjct: 532 SVSLVGEEERKM---LKEIVKAAKAPVKA 557
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 146/389 (37%), Positives = 212/389 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F +++L L I + +PTP+Q+ IP+ + G+D+ ACA TG+GKTAAF P++
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 277
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
E+ + +PR + L+L PTREL Q+H ++ + + +A GG +
Sbjct: 278 ----ERLIYKPRQAPVTR--VLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKS 331
Query: 266 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
Q L DIL+ATPGRL+D L L I L LDEADRMLD FE Q+++I++
Sbjct: 332 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 391
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI-VQRVEFVHESD 383
RQTMLFSAT E++ LAS L N + + V S+TD+ R EF+
Sbjct: 392 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFIRIRP 444
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R + + A + + +F +TKK A + L + G +HG+ +Q +R
Sbjct: 445 NREGDREAIVAALLTRTFTDHVM--LFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 502
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
ALR FK + ILVATDVAARGLDI V V+NF +PN I YVHR+GRT RAG++G
Sbjct: 503 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 562
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E+ + L E+++ A V A
Sbjct: 563 SVSLVGEDERKM---LKEIVKAAKAPVKA 588
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 146/389 (37%), Positives = 211/389 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F +++L L I + +PTP+Q+ IP+ + G+D+ ACA TG+GKTAAF P++
Sbjct: 185 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 243
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
E+ + +PR + L+L PTREL Q+H K+ + + +A GG +
Sbjct: 244 ----ERLIYKPR--QAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKS 297
Query: 266 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
Q L DIL+ATPGRL+D L L I L LDEADRMLD FE Q+++I++
Sbjct: 298 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 357
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI-VQRVEFVHESD 383
RQTMLFSAT E++ LAS L N + + V S+TD+ R EF+
Sbjct: 358 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFIRIRP 410
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R + + A + + +F +TKK A + L + G +HG+ +Q +R
Sbjct: 411 NREGDREAIVAALLMRTFTDHVM--LFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQR 468
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
ALR FK + ILVATDVAARGLDI V V+NF +PN + YVHR+GRT RAG++G
Sbjct: 469 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGR 528
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E + L E+++ A V A
Sbjct: 529 SVSLVGEEERKM---LKEIVKAAKAPVKA 554
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 140/392 (35%), Positives = 215/392 (54%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
V TFAE+ + E L R + P+ +Q A+P ++ G+D++ AQTGSGKT AF PI
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 204 ISGIMREQYVQRPRGSRTVYP--LALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGA 261
+ ++ Y P+ R P A +L+PTREL+ QI + + ++ V GG
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
Query: 262 PINQQLRELERGVDILVATPGRLVDLLERAR-VSLQMIRYLALDEADRMLDMGFEPQIRK 320
QQ L + ++VATPGRL D + + SL+ ++YL LDEADR+L+ FE + +
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQ 187
Query: 321 IVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH 380
I++++ P R+T LFSAT K++++L L N + + S+ D + Q+ FV
Sbjct: 188 ILEEI----PLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVA 243
Query: 381 ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 440
K +L+ +L ++ +++F T G L L GF A I G TQ
Sbjct: 244 AKYKDCYLVYILSEM-------PESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQ 296
Query: 441 QERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 500
+R AL FK+G+ ILV TDVA+RGLDIP V V+N+D+P + DY+HR+GRT RAG+
Sbjct: 297 SKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGR 356
Query: 501 SGLATAFFNENNMSLARPLTELMQEANQEVPA 532
SG+ + N+ + + +L+ + E PA
Sbjct: 357 SGVGISLVNQYELEWYIQIEKLIGKKLPEYPA 388
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 139/381 (36%), Positives = 212/381 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F + L +L +++ ++ PT +Q+ +P ++ RD++A A TG+GKTA+F P +
Sbjct: 3 FEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQH 62
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++ + +R G V LIL PTREL+SQIH A + G+ + + GG P Q
Sbjct: 63 LI--DFPRRYSGQARV----LILTPTRELASQIHRYACHLATDQGLNIAIITGGVPYAPQ 116
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
L+ +DILVATPGRL++ L++ + S + + L +DEADRMLDMGF ++ I +
Sbjct: 117 EEALKGNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRMLDMGFSAVVKAIALEAQ 176
Query: 327 MPPPGMRQTMLFSATFPKE-IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
G +Q MLFSAT + R A + L + I + V I Q ++H +D +
Sbjct: 177 ----GRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQ---WIHLADDK 229
Query: 386 SHLMDLL-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERE 444
H LL H V K+A+ VFV+T+ +LE L G P + GD Q++R
Sbjct: 230 DHKFALLCHLLKQEDV--KRAI--VFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRF 285
Query: 445 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 504
AL F G+ +L+ATDVAARG+DI ++HV+NFD+P D Y+HRIGRTGRAG G A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 505 TAFFNENNMSLARPLTELMQE 525
+ ++M + + +++
Sbjct: 346 ISLAEAHDMRIVGKIERYIEQ 366
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 139/381 (36%), Positives = 212/381 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
F + L +L +++ ++ PT +Q+ +P ++ RD++A A TG+GKTA+F P +
Sbjct: 3 FEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQH 62
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++ + +R G V LIL PTREL+SQIH A + G+ + + GG P Q
Sbjct: 63 LI--DFPRRYSGQARV----LILTPTRELASQIHRYACHLATDQGLNIAIITGGVPYAPQ 116
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
L+ +DILVATPGRL++ L++ + S + + L +DEADRMLDMGF ++ I +
Sbjct: 117 EEALKGNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRMLDMGFSAVVKAIALEAQ 176
Query: 327 MPPPGMRQTMLFSATFPKE-IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
G +Q MLFSAT + R A + L + I + V I Q ++H +D +
Sbjct: 177 ----GRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQ---WIHLADDK 229
Query: 386 SHLMDLL-HAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERE 444
H LL H V K+A+ VFV+T+ +LE L G P + GD Q++R
Sbjct: 230 DHKFALLCHLLKQEDV--KRAI--VFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRF 285
Query: 445 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 504
AL F G+ +L+ATDVAARG+DI ++HV+NFD+P D Y+HRIGRTGRAG G A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 505 TAFFNENNMSLARPLTELMQE 525
+ ++M + + +++
Sbjct: 346 ISLAEAHDMRIVGKIERYIEQ 366
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 146/389 (37%), Positives = 212/389 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
+F +++L L I + +PTP+Q+ IP+ + G+D+ ACA TG+GKTAAF P++
Sbjct: 181 SFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVL- 239
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
E+ + +PR + L+L PTREL Q+H K+ + + V +A GG +
Sbjct: 240 ----ERLIYKPR--QAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKT 293
Query: 266 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 324
Q L G DIL+ATPGRL+D L L + L LDEADRMLD FE Q+++I++
Sbjct: 294 QEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRL 353
Query: 325 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI-VQRVEFVHESD 383
RQTMLFSAT +E++ LAS L N + V S+TD+ R EF+
Sbjct: 354 CSRH----RQTMLFSATMTEEVKDLASVSLKNPTRIFVN---SNTDVAPFLRQEFIRIRP 406
Query: 384 KRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 443
R + + + + + +F +TKK A + L + G +HG+ +Q +R
Sbjct: 407 NREGDREAIVSALLTRTFPDHVM--LFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQR 464
Query: 444 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 503
ALR FK + ILVATDVAARGLDI V V+NF +PN YVHR+GRT RAG++G
Sbjct: 465 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGR 524
Query: 504 ATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E + L E+++ A V A
Sbjct: 525 SVSLVGEEERKM---LKEIVKAAKTPVKA 550
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 137/404 (33%), Positives = 216/404 (53%)
Query: 130 DIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACA 189
++ + + G V V F L N++ Y PTPVQ +P+ + GRD++A A
Sbjct: 155 ELGIVSVGTEVCRPVIEFQHCRFPTVLERNLKAAGYEAPTPVQMQMVPVGLTGRDVIATA 214
Query: 190 QTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQ 249
TGSGKT AF P++ MR +Q S + P LIL PTREL+ QI +AK+
Sbjct: 215 DTGSGKTVAFLLPVV---MRA--LQSESASPSC-PACLILTPTRELAIQIEEQAKELMRG 268
Query: 250 T-GVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 308
++ + GG P+ QL L+ + I++ TPGRL+++L++ V L +R + +DEAD
Sbjct: 269 LPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADT 328
Query: 309 MLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSS 368
ML MGF+ Q+ I++Q+ P QT+L SAT P Q+LA + + + +G+
Sbjct: 329 MLKMGFQQQVLDILEQV----PEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQP 384
Query: 369 TDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL-EHWLYMN 427
+ Q V +V E K+ L ++L+ + Q +VFV+ K GAD L E +
Sbjct: 385 CANVRQIVLWVEEPSKKKKLFEILNDEKLY-----QPPVVVFVDCKLGADLLCEAVQKVM 439
Query: 428 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 487
IH D+ Q ER ++ G+ ++++T + RGLD+ +V V+NFD+P+++D+
Sbjct: 440 SLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGLDLVNVKLVINFDMPSNMDE 499
Query: 488 YVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVP 531
YVH+IGR GR G G A F N NN L + + ++ +P
Sbjct: 500 YVHQIGRAGRLGHRGTAITFMNNNNKRLFLEMVKRVKPTGSILP 543
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 133/312 (42%), Positives = 184/312 (58%)
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
AL+L PTREL+ Q+H + T V + +AYGG +Q+ EL+ GVDIL+ATPGRL+
Sbjct: 79 ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIATPGRLL 138
Query: 286 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKE 345
DLL VSL I L DEADRMLDMGF+ +I +I Q + P +QT+LFSATF +
Sbjct: 139 DLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL----PKTKQTLLFSATFADD 194
Query: 346 IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA 405
I +++ + L + + + D + Q V V ++D++ L L + KQ
Sbjct: 195 IYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV-DADRKRELTSFL----IGSRNWKQV 249
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 465
L VF TK+ AD L + +G + IHGD++Q RE AL FK GK L+ATDVAA
Sbjct: 250 L--VFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAA 307
Query: 466 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQE 525
RG+DI ++HV+N++LP + +DYVHRIGRT RAG SGLA + + L + EL+
Sbjct: 308 RGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDI 367
Query: 526 ANQEVPAWLNRY 537
Q + WL Y
Sbjct: 368 --QLLQQWLPGY 377
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 99/247 (40%), Positives = 142/247 (57%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+ L L I Y +PT +Q+ +IP+ + D+MA AQTG+GKTAAF PI+
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
++ Q +P R AL+L PTREL+ Q+H + T V + +AYGG +
Sbjct: 66 QLISVQPC-KPE-LR-----ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKK 118
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+ EL+ GVDIL+ATPGRL+DLL VSL I L DEADRMLDMGF+ +I +I Q +
Sbjct: 119 QISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL 178
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +QT+LFSATF +I +++ + L + + + D + Q V V ++D++
Sbjct: 179 ----PKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV-DADRK 233
Query: 386 SHLMDLL 392
L L
Sbjct: 234 RELTSFL 240
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 133/312 (42%), Positives = 184/312 (58%)
Query: 226 ALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 285
AL+L PTREL+ Q+H + T V + +AYGG +Q+ EL+ GVDIL+ATPGRL+
Sbjct: 79 ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIATPGRLL 138
Query: 286 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKE 345
DLL VSL I L DEADRMLDMGF+ +I +I Q + P +QT+LFSATF +
Sbjct: 139 DLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL----PKTKQTLLFSATFADD 194
Query: 346 IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQA 405
I +++ + L + + + D + Q V V ++D++ L L + KQ
Sbjct: 195 IYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV-DADRKRELTSFL----IGSRNWKQV 249
Query: 406 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 465
L VF TK+ AD L + +G + IHGD++Q RE AL FK GK L+ATDVAA
Sbjct: 250 L--VFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAA 307
Query: 466 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQE 525
RG+DI ++HV+N++LP + +DYVHRIGRT RAG SGLA + + L + EL+
Sbjct: 308 RGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDI 367
Query: 526 ANQEVPAWLNRY 537
Q + WL Y
Sbjct: 368 --QLLQQWLPGY 377
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 99/247 (40%), Positives = 142/247 (57%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS 205
TF+ L L I Y +PT +Q+ +IP+ + D+MA AQTG+GKTAAF PI+
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 206 GIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQ 265
++ Q +P R AL+L PTREL+ Q+H + T V + +AYGG +
Sbjct: 66 QLISVQPC-KPE-LR-----ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKK 118
Query: 266 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 325
Q+ EL+ GVDIL+ATPGRL+DLL VSL I L DEADRMLDMGF+ +I +I Q +
Sbjct: 119 QISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL 178
Query: 326 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKR 385
P +QT+LFSATF +I +++ + L + + + D + Q V V ++D++
Sbjct: 179 ----PKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV-DADRK 233
Query: 386 SHLMDLL 392
L L
Sbjct: 234 RELTSFL 240
>UNIPROTKB|E2QTT0 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
Length = 738
Score = 553 (199.7 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 132/355 (37%), Positives = 202/355 (56%)
Query: 161 RRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSR 220
R Y+ P V+ P+ G+DL+A A+TG+GKT +F P+I + R Q + + SR
Sbjct: 156 RGVSYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ--ETIKKSR 211
Query: 221 TVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVAT 280
+ P L+LAPTREL++Q+ + K + + + V YGG Q+ + G+DILV T
Sbjct: 212 S--PKVLVLAPTRELANQVAKDFKDITRK--LSVACFYGGTSYQSQINHIRNGIDILVGT 267
Query: 281 PGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM-DMPPPGMRQTMLFS 339
PGR+ D L+ R+ L +R++ LDE D+MLD+GF Q+ I+ + QT+LFS
Sbjct: 268 PGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFS 327
Query: 340 ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV----HESDKRSHLMDLLHAQ 395
AT P+ + ++A ++ + + V VG T VE + H S + + + D+L Q
Sbjct: 328 ATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL--Q 384
Query: 396 VANGVHGKQALTLVFVETKKGAD--ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSG 453
V +G G+ ++F ETKK A+ + N A +HGD Q +RE+ L+ F+ G
Sbjct: 385 VYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGDIAQSQREITLKGFREG 438
Query: 454 KTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF 508
+LVAT+VAARGLDIP V V+ P D++ Y+HR GRTGRAG++G+ F+
Sbjct: 439 SFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFY 493
Score = 41 (19.5 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 493 GRTGRAGKSG 502
GR GR+G+SG
Sbjct: 686 GRAGRSGRSG 695
Score = 37 (18.1 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 491 RIGRTGRAG-KSG 502
R GR+GR+G +SG
Sbjct: 687 RAGRSGRSGGRSG 699
>UNIPROTKB|Q9BQ39 [details] [associations]
symbol:DDX50 "ATP-dependent RNA helicase DDX50"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
Length = 737
Score = 552 (199.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 132/355 (37%), Positives = 202/355 (56%)
Query: 161 RRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSR 220
R Y+ P V+ P+ G+DL+A A+TG+GKT +F P+I + R Q + + SR
Sbjct: 155 RGVTYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ--ETIKKSR 210
Query: 221 TVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVAT 280
+ P L+LAPTREL++Q+ + K + + + V YGG Q+ + G+DILV T
Sbjct: 211 S--PKVLVLAPTRELANQVAKDFKDITRK--LSVACFYGGTSYQSQINHIRNGIDILVGT 266
Query: 281 PGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM-DMPPPGMRQTMLFS 339
PGR+ D L+ R+ L +R++ LDE D+MLD+GF Q+ I+ + QT+LFS
Sbjct: 267 PGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFS 326
Query: 340 ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV----HESDKRSHLMDLLHAQ 395
AT P+ + ++A ++ + + V VG T VE + H S + + + D+L Q
Sbjct: 327 ATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL--Q 383
Query: 396 VANGVHGKQALTLVFVETKKGAD--ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSG 453
V +G G+ ++F ETKK A+ + N A +HGD Q +RE+ L+ F+ G
Sbjct: 384 VYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGDIAQSQREITLKGFREG 437
Query: 454 KTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF 508
+LVAT+VAARGLDIP V V+ P D++ Y+HR GRTGRAG++G+ F+
Sbjct: 438 SFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFY 492
Score = 42 (19.8 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 493 GRTGRAGKSG 502
GR+GR+G+SG
Sbjct: 685 GRSGRSGRSG 694
>UNIPROTKB|P0A8J8 [details] [associations]
symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
Uniprot:P0A8J8
Length = 421
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 133/334 (39%), Positives = 194/334 (58%)
Query: 169 TPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALI 228
TP+Q A+P+++ GRD+ AQTG+GKT AF ++ + + ++ P ALI
Sbjct: 33 TPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQ---PRALI 89
Query: 229 LAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL 288
+APTREL+ QIH +A+ + TG+K+ +AYGG ++QL+ LE GVDIL+ T GRL+D
Sbjct: 90 MAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYA 149
Query: 289 ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQR 348
++ ++L I+ + LDEADRM D+GF IR + ++M PP R MLFSAT ++
Sbjct: 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM--PPANQRLNMLFSATLSYRVRE 207
Query: 349 LASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTL 408
LA + + N ++ V + I + + + +K L L+ + + +
Sbjct: 208 LAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRA-------I 260
Query: 409 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 468
+F TK + + L +G + GD Q++R L F G ILVATDVAARGL
Sbjct: 261 IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL 320
Query: 469 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 502
IP V HV N+DLP+D +DYVHRIGRTGRAG SG
Sbjct: 321 HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 139/361 (38%), Positives = 201/361 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
FA+ L + + + +V TP+Q A+P+ + G+D+ AQTG+GKT AF +
Sbjct: 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++ + G P A+I+APTREL+ QI +A+ TG+K +AYGG ++Q
Sbjct: 71 LLTTPAAE---GRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQ 127
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
L +L+ GVDIL+ T GR++D ++ +L I+ + LDEADRM D+GF IR + ++M
Sbjct: 128 LAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P P R MLFSAT +Q LA + + N + V T +Q E + S++
Sbjct: 187 -PEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVV-EPEQKTGHRIQE-ELFYPSNE-- 241
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 446
H M LL + + ++F TK + + L + + GD Q++RE
Sbjct: 242 HKMALLQTLIEEEWPDR---AIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERI 298
Query: 447 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 506
L F G ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGRTGRAG SG + +
Sbjct: 299 LEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358
Query: 507 F 507
F
Sbjct: 359 F 359
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 139/361 (38%), Positives = 201/361 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
FA+ L + + + +V TP+Q A+P+ + G+D+ AQTG+GKT AF +
Sbjct: 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++ + G P A+I+APTREL+ QI +A+ TG+K +AYGG ++Q
Sbjct: 71 LLTTPAAE---GRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQ 127
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
L +L+ GVDIL+ T GR++D ++ +L I+ + LDEADRM D+GF IR + ++M
Sbjct: 128 LAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P P R MLFSAT +Q LA + + N + V T +Q E + S++
Sbjct: 187 -PEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVV-EPEQKTGHRIQE-ELFYPSNE-- 241
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 446
H M LL + + ++F TK + + L + + GD Q++RE
Sbjct: 242 HKMALLQTLIEEEWPDR---AIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERI 298
Query: 447 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 506
L F G ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGRTGRAG SG + +
Sbjct: 299 LEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358
Query: 507 F 507
F
Sbjct: 359 F 359
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 156/458 (34%), Positives = 246/458 (53%)
Query: 96 DRREREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVN----TFAEID 151
+ E E N ++ +Q ++++ N + I V S + V TF E+
Sbjct: 140 EEEEEEDNENEKEINKKQQQQQQQS---NKQTTDKIKVLQSNRKLKKIVEEELPTFEELH 196
Query: 152 LGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQ 211
L L +++ + +PTP+Q AIP+++ G+D++A A TGSGKTAAF P++ E+
Sbjct: 197 LSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVL-----ER 251
Query: 212 YVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELE 271
+ R R + LIL PTREL+ Q + + + + + GG Q EL
Sbjct: 252 LLFRDSEYRAIR--VLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELR 309
Query: 272 RGVDILVATPGRLVD-LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 330
+ D+++ATPGRL+D LL + L + L LDEADR+LDMGF+ +I KIV+ P
Sbjct: 310 KSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESC----P 365
Query: 331 GMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV-----HESDKR 385
RQTMLFSAT E++ LA L I + V + T + Q EFV H SD+
Sbjct: 366 TNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQ--EFVKIKPQHLSDRP 423
Query: 386 SHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 445
+ L+ L +V N Q T++F +KK L ++ A +HG+ +Q++R
Sbjct: 424 AILLSLC-TRVFN-----QGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFD 477
Query: 446 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 505
+L+ F+ G+ L+A+DVA+RGLDI V V+N+++PN++ +Y+HR+GRT RAG G +
Sbjct: 478 SLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSC 537
Query: 506 AFFNENNMSLARPL-TELMQEA-----NQE-VPAWLNR 536
+F +N+ L + + T+ +A +Q+ V W NR
Sbjct: 538 SFITDNDRKLLKDIVTKARNKAKSRSVSQDNVNFWRNR 575
>UNIPROTKB|F1MMK3 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
Uniprot:F1MMK3
Length = 737
Score = 551 (199.0 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 135/356 (37%), Positives = 202/356 (56%)
Query: 161 RRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSR 220
R Y+ P V+ P+ G+DL+A A+TG+GKT +F P+I + R Q + + SR
Sbjct: 155 RGVTYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQ--ETIKKSR 210
Query: 221 TVYPLALILAPTRELSSQIHVEAKKFSYQTG-VKVVVAYGGAPINQQLRELERGVDILVA 279
+ P L+LAPTREL++Q+ AK F T + V YGG Q+ + G+DILV
Sbjct: 211 S--PKVLVLAPTRELANQV---AKDFKDVTRKLSVACFYGGTSYQSQINHIRNGIDILVG 265
Query: 280 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM-DMPPPGMRQTMLF 338
TPGR+ D L+ R+ L +R++ LDE D+MLD+GF Q+ I+ + QT+LF
Sbjct: 266 TPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDILHESYKTDSEDNPQTLLF 325
Query: 339 SATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFV----HESDKRSHLMDLLHA 394
SAT P+ + ++A ++ + + V VG T VE + H S + + + D+L
Sbjct: 326 SATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVL-- 382
Query: 395 QVANGVHGKQALTLVFVETKKGAD--ALEHWLYMNGFPATTIHGDRTQQERELALRSFKS 452
QV +G G+ ++F ETKK A+ + N A +HGD Q +RE+ L+ F+
Sbjct: 383 QVYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGDIAQSQREITLKGFRE 436
Query: 453 GKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF 508
G +LVAT+VAARGLDIP V V+ P D++ Y+HR GRTGRAG++G+ F+
Sbjct: 437 GSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFY 492
Score = 40 (19.1 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 493 GRTGRAGKSG 502
GR GR+G+SG
Sbjct: 685 GRLGRSGRSG 694
Score = 40 (19.1 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 491 RIGRTGRAG-KSG 502
R+GR+GR+G +SG
Sbjct: 686 RLGRSGRSGGRSG 698
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 146/390 (37%), Positives = 212/390 (54%)
Query: 146 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGS-GKTAAFCFPII 204
+F +++L L I + +PTP+Q+ IP+ + G+D+ ACA TG+ GKTAAF P++
Sbjct: 181 SFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTVGKTAAFILPVL 240
Query: 205 SGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPIN 264
E+ + +PR + L+L PTREL Q+H K+ + + V +A GG +
Sbjct: 241 -----ERLIYKPR--QAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVK 293
Query: 265 QQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 323
Q L G DIL+ATPGRL+D L L + L LDEADRMLD FE Q+++I++
Sbjct: 294 TQEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIR 353
Query: 324 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLI-VQRVEFVHES 382
RQTMLFSAT +E++ LAS L N + V S+TD+ R EF+
Sbjct: 354 LCSRH----RQTMLFSATMTEEVKDLASVSLKNPTRIFVN---SNTDVAPFLRQEFIRIR 406
Query: 383 DKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQE 442
R + + + + + +F +TKK A + L + G +HG+ +Q +
Sbjct: 407 PNREGDREAIVSALLTRTFPDHVM--LFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQ 464
Query: 443 RELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 502
R ALR FK + ILVATDVAARGLDI V V+NF +PN YVHR+GRT RAG++G
Sbjct: 465 RLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAG 524
Query: 503 LATAFFNENNMSLARPLTELMQEANQEVPA 532
+ + E + L E+++ A V A
Sbjct: 525 RSVSLVGEEERKM---LKEIVKAAKTPVKA 551
>ZFIN|ZDB-GENE-060623-1 [details] [associations]
symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
Uniprot:Q1ECZ5
Length = 606
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 141/414 (34%), Positives = 228/414 (55%)
Query: 133 VETSGENVPPAVNTFAEI----DLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMAC 188
+ G ++P V TF E+ DL + NI+ + PTP+Q A+P+ + R+++AC
Sbjct: 151 INVHGTDIPDPVTTFEELQKEYDLDPRIIHNIKAAGFQTPTPIQMQAVPLMMHKREILAC 210
Query: 189 AQTGSGKTAAFCFPIISGIMREQYVQRP--RGSRTVYPLALILAPTRELSSQIHVEAKKF 246
A TGSGKT AFC P+++ ++++P +G R ALI++PTREL++Q H E K
Sbjct: 211 APTGSGKTMAFCLPLLA------HLRQPLNKGFR-----ALIISPTRELATQTHRELLKL 259
Query: 247 SYQTGVKV-VVAYGGAPINQQLRELERGVDILVATPGRLVDLLER--ARVSLQMIRYLAL 303
S G +V ++ G + + + + DILV TP RL+ LL + ++L + +L +
Sbjct: 260 SEGVGFRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLIYLLNQDPPAINLSSVEWLVV 319
Query: 304 DEADRMLD---MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFL 360
DE+D++ + GF Q+ I + P +R+ +LFSATF +++R L N + +
Sbjct: 320 DESDKLFEDGKTGFREQLATIF--LACSSPNVRR-VLFSATFATDVERWCKLNLDNLVSV 376
Query: 361 AVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL 420
++G S+ + + Q++ FV + + M L Q G LVFV++ A L
Sbjct: 377 SIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQ------GFLPPVLVFVQSIDRAREL 430
Query: 421 EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD 480
H L G IH DRTQQ+R+ + SF+SGK +L+ T + ARG+D + V+N+D
Sbjct: 431 YHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINLVINYD 490
Query: 481 LPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWL 534
P +Y+HRIGRTGRAG G A FF E++ L R + ++++A VP ++
Sbjct: 491 FPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSIATVIKKAGCPVPDYM 544
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 138/385 (35%), Positives = 212/385 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
FA++ L + + + TP+Q ++P+ + +D+ AQTG+GKT AF +
Sbjct: 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++ P G + P A+I+APTREL+ QI +A + T +KV + YGG + Q
Sbjct: 71 LLSSSI---PEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQ 127
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ L++GVDIL+ T GR++D + + ++L I+ + LDEADRM D+GF IR + ++M
Sbjct: 128 RKVLDQGVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P R MLFSAT ++Q LA D + + + + + ++ I + + + + DK
Sbjct: 187 -PNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKMR 245
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 446
L+ L+ ++A+ VF TK + L WL +G + GD Q++R
Sbjct: 246 LLLTLIEEDWP-----EKAI--VFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRI 298
Query: 447 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 506
L F G+ ILVATDVAARGL I V+HV N+DLP+D +DYVHRIGRTGRAG G++ +
Sbjct: 299 LEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVS 358
Query: 507 FFNENNMSLARPLTELMQEANQEVP 531
F E +L P E N +P
Sbjct: 359 FACEE-YALNLPAIETY--INHSIP 380
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 138/385 (35%), Positives = 212/385 (55%)
Query: 147 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISG 206
FA++ L + + + TP+Q ++P+ + +D+ AQTG+GKT AF +
Sbjct: 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70
Query: 207 IMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPINQQ 266
++ P G + P A+I+APTREL+ QI +A + T +KV + YGG + Q
Sbjct: 71 LLSSSI---PEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQ 127
Query: 267 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 326
+ L++GVDIL+ T GR++D + + ++L I+ + LDEADRM D+GF IR + ++M
Sbjct: 128 RKVLDQGVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186
Query: 327 MPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRS 386
P R MLFSAT ++Q LA D + + + + + ++ I + + + + DK
Sbjct: 187 -PNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKMR 245
Query: 387 HLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 446
L+ L+ ++A+ VF TK + L WL +G + GD Q++R
Sbjct: 246 LLLTLIEEDWP-----EKAI--VFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRI 298
Query: 447 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 506
L F G+ ILVATDVAARGL I V+HV N+DLP+D +DYVHRIGRTGRAG G++ +
Sbjct: 299 LEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVS 358
Query: 507 FFNENNMSLARPLTELMQEANQEVP 531
F E +L P E N +P
Sbjct: 359 FACEE-YALNLPAIETY--INHSIP 380
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 138/365 (37%), Positives = 209/365 (57%)
Query: 133 VETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTG 192
+ G++V + F EALN N++ Y PTP+Q IP+ + GRD++A A TG
Sbjct: 192 IVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTG 251
Query: 193 SGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKF-SYQTG 251
SGKTAAF P+I+ + E S+T P ALIL PTREL+ QI +AK+ S
Sbjct: 252 SGKTAAFLLPVITRALCE--------SKT--PSALILTPTRELAIQIENQAKELMSGLPR 301
Query: 252 VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 311
+K V+ GG P+ QL L + V +++ATPGRL+D+++++ V L I+ + +DEAD ML
Sbjct: 302 MKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLK 361
Query: 312 MGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDL 371
MGF+ Q+ I++ + P QT+L SAT P I++LAS L N + + G
Sbjct: 362 MGFQQQVLDILEHV----PNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCSS 417
Query: 372 IVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLY-MNGFP 430
+ Q + +V E K+ L ++L N + LVFV+ K GAD L + + G
Sbjct: 418 VRQIILWVEEPAKKKKLFEIL-----NDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLK 472
Query: 431 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
+ +IH +++Q ER+ L+ G ++V+T V RGLD+ V VVNFD+P+ +D+YVH
Sbjct: 473 SVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVH 532
Query: 491 RIGRT 495
++ RT
Sbjct: 533 QV-RT 536
>FB|FBgn0021995 [details] [associations]
symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
NextBio:836725 Uniprot:Q7JQN4
Length = 782
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 138/392 (35%), Positives = 216/392 (55%)
Query: 144 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPI 203
+ +F +++L L I Y+ PTP+Q IP+++ GRD+ CA TG+GKTAA+ P
Sbjct: 156 ITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPT 215
Query: 204 ISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIHVEAKKFSYQTGVKVVVAYGGAPI 263
+ E+ + RP ++ + + L+L PTREL +Q++ K+ T + V +A GG +
Sbjct: 216 L-----ERLLYRPLNNKAITRV-LVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDV 269
Query: 264 NQQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIV 322
Q L + DI++ATPGRL+D ++ +L I L LDEADRMLD F Q+++I+
Sbjct: 270 KAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEII 329
Query: 323 QQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH-E 381
RQTMLFSAT ++++ LA+ L I + V + R EF+
Sbjct: 330 NSCCKT----RQTMLFSATMSEQVKDLAAVSLDKPIKVFVNN--NQQVAFNLRQEFIRIR 383
Query: 382 SDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 441
DK +L + + H +VFV+TKK A L L + G A +HG+ TQQ
Sbjct: 384 EDKEGDREPILASLICRTFHDH---CMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQ 440
Query: 442 ERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 501
+R +L+ FK + +L+ATDVAARGLDI V V+NF +P + Y+HR+GRT RAG++
Sbjct: 441 QRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRA 500
Query: 502 GLATAFFNENNMSLARPLTELMQEA--NQEVP 531
G++ + E + + + + + N+ +P
Sbjct: 501 GISVSLAGEKERKIVKDIIKNAESTIKNRIIP 532
WARNING: HSPs involving 720 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 609 535 0.00093 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 970
No. of states in DFA: 618 (66 KB)
Total size of DFA: 288 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.68u 0.11s 45.79t Elapsed: 00:00:02
Total cpu time: 45.75u 0.12s 45.87t Elapsed: 00:00:02
Start: Mon May 20 15:06:14 2013 End: Mon May 20 15:06:16 2013
WARNINGS ISSUED: 2